BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg494587
Length=1996
Score E
Sequences producing significant alignments: (Bits) Value
AT5G44090.1 | Symbols: | Calcium-binding EF-hand family protei... 3055 0.0
AT1G03960.1 | Symbols: | Calcium-binding EF hand family protei... 1555 0.0
AT1G54450.1 | Symbols: | Calcium-binding EF-hand family protei... 501 1e-140
> AT5G44090.1 | Symbols: | Calcium-binding EF-hand family protein
| chr5:17742766-17748396 REVERSE LENGTH=2463
Length=2463
Score = 3055 bits (1654), Expect = 0.0
Identities = 1810/1885 (96%), Gaps = 12/1885 (1%)
Strand=Plus/Plus
Query 122 TTTGTTGTCGTTCTGGTTCACAGTGAATAAGATA-AA-A-GATCATGGAAATCGATGGTG 178
|||||||| |||||| ||| |||||||||||||| || | |||||||||||||||||||
Sbjct 444 TTTGTTGTAGTTCTGATTCTCAGTGAATAAGATAGAAGATAATCATGGAAATCGATGGTG 503
Query 179 TG-AACGATGTTCAGATTTTGGATCCTGAGCTTTTACAGCTTCCGGGTTTGTCTCCTGTA 237
| ||||||||||||||||||||||||||||| || |||||||| |||||||||||||||
Sbjct 504 -GAAACGATGTTCAGATTTTGGATCCTGAGCTCTTGCAGCTTCCCGGTTTGTCTCCTGTA 562
Query 238 TCACTTAAAGCAAACCCTCATATTGCTGAAGAACTCTTCTCCCAGTGGCTATCGCTCCCT 297
|||||||||| ||| ||||||||||||||||||||||||||||||||||| || || |||
Sbjct 563 TCACTTAAAGAAAATCCTCATATTGCTGAAGAACTCTTCTCCCAGTGGCTTTCACTTCCT 622
Query 298 GAAACTGGCCGATTGGTCAAGTCGTTAATTGATGATACTAAATCGAGTACCCCAGTTAGT 357
||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||
Sbjct 623 GAAACTGGCCGATTGGTCAAGTCTTTAATTGATGATACTAAATCTAGTACCCCAGTCAGT 682
Query 358 GTGTCCAAGAATTGTACCAGTCTCAATGTTGCTTGCGGAAGTGCATTGCCATCTGTGTTT 417
|| ||||| |||||||| |||||||||||||||||||| ||||||||||||||||| |||
Sbjct 683 GTATCCAAAAATTGTACTAGTCTCAATGTTGCTTGCGGGAGTGCATTGCCATCTGTTTTT 742
Query 418 CTGAACAGCGGCACGCCCCCACTATCCCCACGAGGCTCACCTGGGTCTCCCCGTTTCTCG 477
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 743 CTGAACAGCGGCACTCCCCCACTATCCCCACGAGGCTCACCTGGGTCTCCCCGTTTCTCG 802
Query 478 AGGCAAAAGACAAGCCCTTCTCTACAGTCTCCTCTGAAATCAGTCAGAGAACCAAAGCGC 537
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 803 AGGCAAAAGACAAGCCCTTCTCTACAGTCTCCTCTGAAATCAGTCAGGGAACCAAAGCGC 862
Query 538 CAACTCATTCCTCAGTTTTACTTCCAACATGGGCGTCCACCTGCGAAAGAACTAAGGGAG 597
||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct 863 CAACTCATTCCACAGTTTTACTTCCAACATGGACGTCCACCTGCGAAGGAACTAAGGGAG 922
Query 598 CAATGTATATCCATGGTTGATCAATTTTTTAGTAACTATATAGACGGACTTCATATGGAT 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 923 CAATGTATATCCATGGTTGATCAATTTTTTAGTAACTATATAGACGGACTTCATATGGAT 982
Query 658 GAATTCAAATCCATTACTAAAGAAGTCTGCAAGCTGCCTTCTTTTCTTTCTTCTGTACTA 717
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 983 GAATTCAAATCCATTACTAAAGAAGTCTGCAAGCTGCCTTCTTTTCTTTCCTCTGTACTA 1042
Query 718 TTTAGAAAGATAGATACGAGTTGCACTGGTATCGTTACAAGGGATGCATTTATCAAGTAT 777
|||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||
Sbjct 1043 TTTAGAAAGATAGACACGAGTGGCACCGGTATCGTTACAAGGGATGCATTTATCAAGTAT 1102
Query 778 TGGGTTGATGGACATATGTTGGCAATGGACGTAGCCTCACAGATATATAATATTTTACGG 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1103 TGGGTTGATGGACATATGTTGGCAATGGACGTAGCCTCACAGATATATAATATTTTAAGG 1162
Query 838 CAGCCAGGTTGCAAGTACCTTAGACAGGCTGACTTCAAACCAGTTCTTGAAGAGCTTCTG 897
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1163 CAGCCAGGTTGCAAGTACCTTAGACAGGCTGACTTCAAACCAGTTCTTGATGAGCTTCTG 1222
Query 898 ACAACTCATCCTGGCTTGGAATTCCTCAGGAATACACCTGAATTTCAAGAAAGATATGCT 957
||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct 1223 ACAACTCATCCCGGCTTGGAATTCCTGAGGAATACACCTGAGTTTCAAGAAAGATATGCT 1282
Query 958 GAGACCGTCATCTACAGAATATTTTACTACATAAACAGATCAGGTACTGGTTGCATTACC 1017
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1283 GAGACCGTCATCTACAGAATATTTTACTACATAAACAGATCAGGTACTGGTTGCATTACT 1342
Query 1018 CTTAGAGAGCTGAAGCGTGGGAATCTTATTACTGCCATGCAACAAGTTGATGAAGAAGAC 1077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1343 CTTAGAGAGCTGAAGCGTGGGAATCTTATTACTGCCATGCAACAAGTTGATGAAGAAGAC 1402
Query 1078 GACATCAATAAAGTTATTAGGTACTTCTCCTATGAGCATTTCTACGTTATATACTGCAGA 1137
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1403 GACATCAATAAAGTTATTAGGTACTTCTCCTATGAGCATTTCTACGTGATATACTGCAGA 1462
Query 1138 TTTTGGGAACTCGATGGCGACCATGATTTCCTTATTGATAAGGAAAATCTCATCAAATAT 1197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1463 TTTTGGGAACTCGATGGCGACCATGATTTCCTTATTGATAAGGAAAATCTCATCAAATAT 1522
Query 1198 GGTAATCATGCACTTACCTACAGGATTGTCGACAGAATATTTTCACAGGTCCCTAGGAAA 1257
||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1523 GGTAATCATGCCCTTACCTACAGGATTGTCGACAGAATATTTTCACAGGTTCCTAGGAAA 1582
Query 1258 TTTACAAGCAAAGTTGAGGGGAAGATGAGTTATGAAGATTTTGCATACTTCATTCTCGCT 1317
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1583 TTTACAAGCAAAGTTGAGGGGAAGATGAGTTATGAAGATTTTGCATACTTTATTCTCGCT 1642
Query 1318 GAGGAGGATAAGTCATCTGAGCCTAGTCTTGAGTATTGGTTCAAGTGCATAGACCTGGAT 1377
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1643 GAGGAGGATAAGTCATCTGAGCCTAGTCTTGAGTATTGGTTCAAGTGCATAGACCTAGAT 1702
Query 1378 GGAGATGGGGTGATCACTCCCAACGAAATGCAGTTTTTCTACGAAGAGCAGCTGCATCGC 1437
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1703 GGAGATGGGGTGATCACTCCCAACGAGATGCAGTTTTTCTACGAAGAGCAGCTGCATCGC 1762
Query 1438 ATGGAATGTATAACTCAGGAACCTGTACTCTTTGAAGATATCCTATGTCAAATATTCGAC 1497
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1763 ATGGAATGTATAACCCAGGAACCTGTACTCTTTGAAGATATCCTATGTCAAATATTCGAC 1822
Query 1498 ATGATTAAACCAGAGAAGGAGAACTGCATCACACTCCAGGATCTGAAAGCATCTAAACTT 1557
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1823 ATGATTAAACCAGAGAAGGAGAACTGCATCACACTCCAGGATCTGAAAGCATCCAAACTT 1882
Query 1558 TCTGGAAATATTTTCAATATACTCTTCAACCTGAACAAATTCATGGCTTTTGAAACCCGT 1617
|||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct 1883 TCTGGAAATATTTTCAATATACTCTTTAACCTGAACAAATTCATGGCGTTTGAAACCCGT 1942
Query 1618 GACCCTTTTCTCATTCGCCAGGAACGTGAGAATCCAACATTGACGGAATGGGACCGATTT 1677
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1943 GACCCTTTTCTCATTCGTCAGGAACGTGAGAATCCAACATTGACGGAATGGGACCGATTT 2002
Query 1678 GCTCAGAGAGAGTATGTGAGGTTGTCAATGGAGGAAGATGTGGAGGAAGTCTCGAATGGG 1737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2003 GCTCAGAGAGAGTATGTGAGGTTGTCAATGGAGGAAGATGTGGAGGAAGTCTCGAATGGG 2062
Query 1738 AGTGCAGATGTCTGGGATGAACCACTCGAGTCTCCATTTTAGTGACTCGTAAGAGTTTCT 1797
||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2063 AGTGCAGATGTTTGGGATGAACCACTCGAATCTCCATTTTAGTGACTCGTAAGAGTTTCT 2122
Query 1798 TGGGAAGAAGAAGAAGAGGTCAGATCTTCTTGGGTGGTAACAGACTCGGAAACAACTCTC 1857
||||||||||| | ||| |||||||||||||||||||||| || ||||||||||| | ||
Sbjct 2123 TGGGAAGAAGAGGGAGAAGTCAGATCTTCTTGGGTGGTAAGAGCCTCGGAAACAATTTTC 2182
Query 1858 AGACA-AC--C-ACGAAAGCTAGTCCCTTCCACGGTTCCACCTAGAAATTGGCGACCACA 1913
||||| || | |||||||| ||||| ||||||||||||||||||| ||||||||||| |
Sbjct 2183 AGACAGACAACCACGAAAGCCAGTCCATTCCACGGTTCCACCTAGAGATTGGCGACCA-A 2241
Query 1914 -AGACTTCTCTGAGGCGTAAGCTTGTGTTA-TTGCATGAAATATTTGTCTTGCTTAGGTT 1971
|||||| || || |||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 2242 GAGACTTATCCGATGCGTAAGCTTGTGTTAGTTTCATGAAATATTTGTCTTGCTTAGGTT 2301
Query 1972 TTTCAGGTTGGACCCTCTTTCAATC 1996
| |||||||||||||||||||||||
Sbjct 2302 TCTCAGGTTGGACCCTCTTTCAATC 2326
Score = 69.4 bits (37), Expect = 1e-10
Identities = 37/37 (100%), Gaps = 0/37 (0%)
Strand=Plus/Plus
Query 86 AAGAAATTAGGGTTTCGATCCAATTTTAGAATTGACT 122
|||||||||||||||||||||||||||||||||||||
Sbjct 385 AAGAAATTAGGGTTTCGATCCAATTTTAGAATTGACT 421
> AT1G03960.1 | Symbols: | Calcium-binding EF hand family protein
| chr1:1013715-1017929 FORWARD LENGTH=2331
Length=2331
Score = 1555 bits (842), Expect = 0.0
Identities = 1218/1397 (87%), Gaps = 35/1397 (3%)
Strand=Plus/Plus
Query 403 TTGCCATCTGTGTTTCTGAACAGCGGCACGCCCCCACTATCCCCACGAGGCTCAC-CTGG 461
||||| ||||||||||||| |||| |||| ||||||||||| |||||| |||| | ||||
Sbjct 581 TTGCCTTCTGTGTTTCTGAGCAGCAGCACTCCCCCACTATCTCCACGAAGCTC-CTCTGG 639
Query 462 GTCTCCC-CGTTTCTCGAGGCAAAAGACAAG--C-CCTTCTCTACAGTCTCCTCTGAAAT 517
|| ||| |||||||| ||||||| ||| || | |||||||| || |||||||| | ||
Sbjct 640 TTC-CCCTCGTTTCTCCAGGCAAAGGACTAGCCCTCCTTCTCTCCACTCTCCTCTTAGAT 698
Query 518 CAGTC-AGAGAACCAAAGCGCCAACTCATTCCTCAGTTTTACTTCCAACATGGGCGTCCA 576
|| || || || |||||||||||||||||||||||||| |||| |||||| |||||||||
Sbjct 699 CACTCAAG-GAGCCAAAGCGCCAACTCATTCCTCAGTTCTACTACCAACACGGGCGTCCA 757
Query 577 CCTGCGAAAGAACTAAGGGAGCAATGTATATCCATGGTTGATCAATTTTTTAGTAACTAT 636
|| || |||||||||| |||||||||| ||||||||||||||||| ||||||||||||||
Sbjct 758 CCAGCAAAAGAACTAAAGGAGCAATGTCTATCCATGGTTGATCAAGTTTTTAGTAACTAT 817
Query 637 ATAGACGGACTTCATATGGATGAATTCAAATCCATTACTAAAGAAGTCTGCAAGCTGCCT 696
|| || ||||| ||| | |||||||||||||||||||| ||| |||||||||||||||||
Sbjct 818 ATTGATGGACTACATGTAGATGAATTCAAATCCATTACGAAACAAGTCTGCAAGCTGCCT 877
Query 697 TCTTTTCTTTCTTCTGTACTATTT-AGAAAGATAGATACGAGTTGCACTGGTATCGTTAC 755
|||||||||||| ||| ||| ||| |||||||| ||| | | |||||||| ||| |||||
Sbjct 878 TCTTTTCTTTCTCCTGCACT-TTTCAGAAAGATCGATCCCAATTGCACTGATATAGTTAC 936
Query 756 AAGGGATGCATTTATCAAGTATTGGGTTGATGGAC-ATATGTTGGCAATGGACGTAGCCT 814
||||||||||||||||||||||||| ||||||| | ||||||| | |||||| |||||
Sbjct 937 AAGGGATGCATTTATCAAGTATTGGATTGATGG-CAATATGTTAACTATGGACACAGCCT 995
Query 815 CACAGATATATAATATTTTACGGCAGCCA-GGTTGCAAG-TACCTTAGACAGGCTGACTT 872
| |||||||||||||| || ||||| || || ||| || || || |||||||| |||||
Sbjct 996 CCCAGATATATAATATACTAAGGCAG-CAGGGCTGC-AGCTATCTCAGACAGGCAGACTT 1053
Query 873 CAAACCAGTTCTTGAAGAGCTTCTGACAACTCATCCTGGCTTGGAATTCCTCAGGA--AT 930
||||||||||||||| ||||||||| |||| |||||||| || ||||| | |||| ||
Sbjct 1054 CAAACCAGTTCTTGATGAGCTTCTGGCAACACATCCTGGATTAGAATTTTTGAGGACGAT 1113
Query 931 ACACCTGAATTTCAAGAAAGATATGCTGAGACCGTCATCTACAGAATATTTTACTACATA 990
| | | || |||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 1114 A-AGC-GAGTTTCAAGAAAGATATGCTGAAACGGTCATCTACAGAATATTTTACTACATT 1171
Query 991 AACAGATCAGGTACTGGTTGCATTACCCTTAGAGAGCTGAAG-CGTGGGAATCTT-ATTA 1048
|||||||| || ||||| ||| |||| |||||||||||| || ||||| ||| || |||
Sbjct 1172 AACAGATCCGGAACTGGCTGCCTTACTCTTAGAGAGCTG-AGACGTGGAAAT-TTAATTG 1229
Query 1049 CTGCCATGCAACAAGTTGATGAAGAAGACGACATCAATAAAGTTATTAGGTACTTCTCCT 1108
|||| ||||||||| |||||||||| |||||||| |||||| ||||||||||||||||||
Sbjct 1230 CTGCTATGCAACAACTTGATGAAGAGGACGACATTAATAAAATTATTAGGTACTTCTCCT 1289
Query 1109 ATGAGCATTTCTACGTTATATACTGCAGATTTTGGGAACTCGATGGCGACCATGATT-TC 1167
||||||| |||||||| |||||||||| |||||||||||| ||||| |||||||||| |
Sbjct 1290 ATGAGCACTTCTACGTGATATACTGCAAATTTTGGGAACTTGATGGTGACCATGATTGT- 1348
Query 1168 CTTATTGATAAGGAAAATCTCATCAAATATGGTAATCATGCACTTACCTACAGGATTGTC 1227
||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||
Sbjct 1349 TTTATTGATAAGGACAATCTCATCAAATATGGTAATAATGCCCTTACCTACAGGATTGTT 1408
Query 1228 GACAGAATATTTTCACAGGTCCCTAGGAAATTTACAAGCAAAGTTGAGGGGAAGATGAGT 1287
|| ||||||||||||||| | || ||||| ||||| || |||||||| ||||||||||||
Sbjct 1409 GATAGAATATTTTCACAGATTCCAAGGAAGTTTACGAGTAAAGTTGAAGGGAAGATGAGT 1468
Query 1288 TATGAAGATTTTGCATACTTCATTCTCGCTGAGGAGGATAAGTCATCTGAGCCTAGTCTT 1347
||||||||||||| |||||||||||||||||||| || ||||| || ||||||||||||
Sbjct 1469 TATGAAGATTTTGTGTACTTCATTCTCGCTGAGGAAGACAAGTCTTCCGAGCCTAGTCTT 1528
Query 1348 GAGTATTGGTTCAAGTGCATAGACCTGGATGGAGATGGGGTGATCACTCCCAACGAAATG 1407
|||||||||||||| ||| ||||| |||||||| ||||||| |||||| | |||||||||
Sbjct 1529 GAGTATTGGTTCAAATGCGTAGACTTGGATGGAAATGGGGTAATCACTTCAAACGAAATG 1588
Query 1408 CAGTTTTTCTACGAAGAGCAGCTGCATCGCATGGAATGTATAACTCAGGAACCTGTACTC 1467
|||||||||| ||||||||||||||||||||||||||| ||||| |||||| |||| ||
Sbjct 1589 CAGTTTTTCTTCGAAGAGCAGCTGCATCGCATGGAATGCATAACCCAGGAAGCTGTTCT- 1647
Query 1468 TTTGA-AGATATCCTATGTCAAAT-ATTCGACATGATTAAACCAGAGAAGGAGAACTGCA 1525
||| | ||||||||||||||||| ||| ||||||||| ||| |||||||||||||| |
Sbjct 1648 TTTCAGTGATATCCTATGTCAAATAATT-GACATGATTGGACCCGAGAAGGAGAACTGTA 1706
Query 1526 TCACACTCCAGGATCTGAAAGCATCTAAACTTTCTGGAAATATTTTCAATATACTCTTCA 1585
|||| |||||||||||||||| ||| |||||||| | ||| ||||||||||||||||||
Sbjct 1707 TCACCCTCCAGGATCTGAAAGGATCGAAACTTTCAGCAAACGTTTTCAATATACTCTTCA 1766
Query 1586 ACCTGAACAAATTCATGGCTTTTGAAACCCGTGACCCTTTTCTCATTCGCCAGGAACGTG 1645
|||| || || |||||||| |||||||| |||||||| |||||||||||||||||||| |
Sbjct 1767 ACCTTAATAAGTTCATGGCATTTGAAACACGTGACCCATTTCTCATTCGCCAGGAACGGG 1826
Query 1646 -AGAATCCAACA-TTGACGGAATGGGACCGATTTGCTCAGAGAGAGTATGTGAGGTTGTC 1703
|| |||||| | ||||| || ||||| |||||||||||||||||||||| ||| |||||
Sbjct 1827 AAG-ATCCAA-ATTTGACAGAGTGGGATCGATTTGCTCAGAGAGAGTATGCGAGATTGTC 1884
Query 1704 AATGGAGGAAGATGTGGAGGAAGTCTCGAATGGGAGTGCAGATGTCTGGGATGAACCACT 1763
||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||
Sbjct 1885 AATGGAGGAAGATGTAGATGAAGTCTCAAATGGGAGTGCAGATGTCTGGGATGAACCACT 1944
Query 1764 CGAGTCTCCATTTTAGT 1780
||| ||||||||||||
Sbjct 1945 CGAACCTCCATTTTAGT 1961
> AT1G54450.1 | Symbols: | Calcium-binding EF-hand family protein
| chr1:20336340-20339535 REVERSE LENGTH=1838
Length=1838
Score = 501 bits (271), Expect = 1e-140
Identities = 788/1032 (76%), Gaps = 58/1032 (6%)
Strand=Plus/Plus
Query 775 TATTGGGTTGATGGACATATGTTGGCAATGGACG-TAGC--CTCACAG-ATATATAATAT 830
||||||||| | ||| ||||||| ||| ||| | || | ||| || || || ||||
Sbjct 604 TATTGGGTTAAGGGAAATATGTTAACAAAGGA-GATAACAAGTCA-AGTATTTACAATA- 660
Query 831 TTTACGGCAGCCAGGTTGCAAGTACCTTAG-ACAGGCTGACTTCAAACCAGTTCTTGAAG 889
|| | |||||||| | ||| |||||| | |||| ||| ||||| ||||| ||| |||
Sbjct 661 TTGA-AGCAGCCAGATCACAACTACCTT-GTCCAGGATGATTTCAAGCCAGTGCTTCAAG 718
Query 890 AGCTT-CTGACAACTCATCCTGG-CTTGGAATTCCT-C-AGGAATACACCTGAATTTCAA 945
| || || |||| || ||||| ||| |||||| | | ||| ||||| ||||||||
Sbjct 719 A-ATTATTGGCAACACACCCTGGTCTT-GAATTCTTGCAAGG--CACACCGGAATTTCAG 774
Query 946 GAAAGATATGCTGAGACCGTCATCTACAGAATATTTTACTACATAAACA-GATCAGGTAC 1004
|| ||||||||||| || || || |||||||||| |||||||||||| | || || |
Sbjct 775 GATAGATATGCTGAAACTGTAATATACAGAATATATTACTACATAAATAGGA-GTGGAAA 833
Query 1005 TGGTTGCA--TTACCCTT-AGAGAGCTGAAGCGTGGGAATCTTA-TT-ACTGCCATGCAA 1059
||| ||| ||| |||| |||||||| ||||| || ||| ||| || || || |||||
Sbjct 834 TGG--GCATCTTA-CCTTGAGAGAGCTTAAGCGAGGAAAT-TTAGTTGAC-GCAATGCAG 888
Query 1060 CAAGTTGATGAAGAAGACGACATCAATAAAGTTATT-AGGTACTTCTCCTATGAGCATTT 1118
|| | ||||||||||| ||||||||| ||| | || ||||||||||| ||||| |||||
Sbjct 889 CATGCCGATGAAGAAGAGGACATCAAT-AAGGTGTTGAGGTACTTCTCGTATGAACATTT 947
Query 1119 CTACGTTATATACTGC-AGATTTTGGGAACTCGATGGC-GACCATGATTTCCTT-ATTGA 1175
||| || ||||||||| || || ||||| | ||| | || |||||||| ||| || ||
Sbjct 948 CTATGTCATATACTGCAAG-TTCTGGGAGTTGGAT-ACAGATCATGATTT-CTTAATCGA 1004
Query 1176 TAAGGAAAATCTCATCAAATATGGTAATCATGCACTTACCTACAGGATTGTCGA-CAGAA 1234
|| || ||||||||| |||| |||| ||||| || ||||| ||||||||||| | |||
Sbjct 1005 CAAAGAGAATCTCATCCGATATAGTAACCATGCGCTCACCTATAGGATTGTCGATC-GAA 1063
Query 1235 TATTTTCACAGGTCCCTAGGAAATTTACAAGCAAAGTTGAGGGGAAGATGAGTTATGAAG 1294
| ||||||||||| || ||||| ||||| || ||| || || |||||| ||||||| |
Sbjct 1064 TCTTTTCACAGGTACCGAGGAAGTTTACTAGTAAAACCGAAGGAAAGATGGGTTATGAGG 1123
Query 1295 ATTTTGCATACTTCAT-TCTCGCTGAGGAGGATAAGTCATCTGAGCCTAGTCTTGAGTAT 1353
|||||| |||||||| | | ||||| || || |||||||| || |||||||||||||||
Sbjct 1124 ATTTTGTTTACTTCATAT-TGGCTGAAGAAGACAAGTCATCAGAACCTAGTCTTGAGTAT 1182
Query 1354 TGGTTCAAGTGCATAGACCTGGATGGAGATGGGGTGATCACTCCCAACGAAATGCAGTT- 1412
|||||||||||||| || |||||| | |||| || | || | ||||| |||| ||
Sbjct 1183 TGGTTCAAGTGCATTGATTTGGATGCAAATGGAGTTTTGACGCGGAACGAGCTGCAATTC 1242
Query 1413 TTTCTACGAAGAGCAGCTGCATCGCATGGAATGTATAACTCAGGAACCTGTACTCTTTGA 1472
||| ||||| |||||||| ||| | |||||||| || | || || | || | |||||
Sbjct 1243 TTT-TACGAGGAGCAGCTACATAGAATGGAATGCATGGCGCAAGAGGCGGTGTTGTTTGA 1301
Query 1473 AGATATCCTATGTCAAATATTCGACATGATTAAACCAGAGAAGGA-GAACTGCATCACAC 1531
||||| | || ||| ||||||||||| | ||||||||| | || | | ||| |
Sbjct 1302 GGATATTTTGTGCCAATTATTCGACATGGTCAAACCAGAGGACGAAGGGTT-CATTTGTC 1360
Query 1532 TCCAGGATCTGAAAGCATCTAAACTTTCTGGAAATATTTTCAATATACTCTTCAACCTGA 1591
| | ||| |||| | |||||||||||||||||| | ||||| ||||| || ||||| |
Sbjct 1361 TAAATGATTTGAAGGGTTCTAAACTTTCTGGAAATGTCTTCAACATACTTTTTAACCTCA 1420
Query 1592 ACAAATTCATGGCTTTTGAAACCCGTGA-CCCTTTTCTCATTCGCCAGGAACGTG-AGAA 1649
|||| || ||||| |||||||| ||||| ||||| ||||| |||||||| || | | ||
Sbjct 1421 ACAAGTTTATGGCGTTTGAAACGCGTGATCCCTTC-CTCATCCGCCAGGAGCGCGCA-AA 1478
Query 1650 TCCAACATTGACGGAATGGGACCGATTTGCTCAGAGAGAGTATGTGAGGTTGTCAATGGA 1709
||| |||| ||| || ||||| || |||||||| ||||| ||| | ||| | ||||||||
Sbjct 1479 TCCGACATGGACAGAGTGGGATCGTTTTGCTCATAGAGAATATATTAGGCTATCAATGGA 1538
Query 1710 GGAAGATGTGGAGGAAGTCT-CGAATGGGAGTGCAGATGTC-TGGGATGAAC-CACTCGA 1766
|||||||| || || | || | ||||| ||||| || | | ||||| || | |||| ||
Sbjct 1539 AGAAGATGTCGAAGATG-CTTCTAATGGAAGTGCTGAAG-CATGGGACGA-CTCACTTGA 1595
Query 1767 G-TCTCCATTTT 1777
| || || ||||
Sbjct 1596 GGTCCCC-TTTT 1606
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 98895073650
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5