BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg494602 Length=509 Score E Sequences producing significant alignments: (Bits) Value AT5G43970.1 | Symbols: TOM22-V, TOM9-2, ATTOM22-V | translocase... 671 0.0 > AT5G43970.1 | Symbols: TOM22-V, TOM9-2, ATTOM22-V | translocase of outer membrane 22-V | chr5:17692807-17693403 FORWARD LENGTH=597 Length=597 Score = 671 bits (363), Expect = 0.0 Identities = 455/497 (92%), Gaps = 16/497 (3%) Strand=Plus/Plus Query 1 CTCACTCTCCGAAGCGATTATTCAGAAAGTTTTAA-CC--AAAA-C---aaaaaaaaaTC 53 |||||||||||||||| |||||||||||||||| || |||| | ||||||||| | Sbjct 12 CTCACTCTCCGAAGCG---ATTCAGAAAGTTTTAACCCAAAAAAGCAAAAAAAAAAAAAC 68 Query 54 TTCTT-ATCAATCAATGGCGGCGAAGAGAATCGGAGCCGGTAAATCTGGAGGCGGAGATC 112 || || ||| || ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 69 TT-TTGTTCACTCGATGGCGGCGAAGAGAATCGGAGCCGGTAAATCTGGCGGCGGAGATC 127 Query 113 CAAACATATTGGCGAGGATATCAAACTCCGAGATCGTGTCTCAAGGAAGACGCGCCGCTG 172 |||||||||| |||||||| |||||||||||||||||||| |||||||||||||| || | Sbjct 128 CAAACATATTAGCGAGGATTTCAAACTCCGAGATCGTGTCCCAAGGAAGACGCGCAGCAG 187 Query 173 GAGATGCCGTCGAAGTATCAAAGAAACTGCTACGGAGCACCGGAAAAGCAGCGTGGATCG 232 ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct 188 GAGATGCCGTCGAAGTATCGAAGAAACTGCTCCGGAGCACCGGAAAAGCAGCGTGGATCG 247 Query 233 CTGGAACAACTTTTCTCATCCTTGTTGTTCCATTGATCATTGAGATGGATCGCGAGGCAC 292 |||| |||||||||||||| |||||||||||||||||||| ||||||||||| ||||||| Sbjct 248 CTGGGACAACTTTTCTCATACTTGTTGTTCCATTGATCATCGAGATGGATCGAGAGGCAC 307 Query 293 AAATCAACGAAATTGAGCTTCAAAATGCCAGTCTCCTCGGAGCTCCACCATCTCCAATGC 352 ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct 308 AAATCAACGAAATTGAGCTTCAACAGGCCAGTCTCCTCGGAGCTCCACCATCTCCAATGC 367 Query 353 AAAGGGGATTGTAAGAATCCCT-ATTATGGATTAGGGTTCTCTGTTTTACCTGTGTTTTT 411 |||||||||||||||||||||| ||||||||||||||| ||||||||||| || ||||| Sbjct 368 AAAGGGGATTGTAAGAATCCCTTATTATGGATTAGGGTCCTCTGTTTTACGAGT-TTTTT 426 Query 412 TG-TTATATGGTGTTTTTTGGAATTTGAATTTCGTATAAGAGTGCTTTACTTTACATCGT 470 || ||||||| |||| |||| ||||||||||||||||||||||| |||| || ||||||| Sbjct 427 TGGTTATATGTTGTTGTTTG-AATTTGAATTTCGTATAAGAGTGGTTTAATTCACATCGT 485 Query 471 TGGATTCATAAAGTTCA 487 ||||||||||||||||| Sbjct 486 TGGATTCATAAAGTTCA 502 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 24313327148 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5