BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg494609
Length=2488
Score E
Sequences producing significant alignments: (Bits) Value
AT5G43930.4 | Symbols: | Transducin family protein / WD-40 rep... 2846 0.0
AT1G04140.2 | Symbols: | Transducin family protein / WD-40 rep... 963 0.0
> AT5G43930.4 | Symbols: | Transducin family protein / WD-40 repeat
family protein | chr5:17676816-17681000 FORWARD LENGTH=2831
Length=2831
Score = 2846 bits (1541), Expect = 0.0
Identities = 1741/1837 (95%), Gaps = 16/1837 (1%)
Strand=Plus/Plus
Query 605 TTGGGTGGTCAGATTCCACCCGCTTCATTCAGAAATAGTTGCTAGTGGAAGTTTAGATCT 664
|||| |||||||||||||||||| |||||||||||||||||| |||||||||||||||||
Sbjct 756 TTGGTTGGTCAGATTCCACCCGCATCATTCAGAAATAGTTGCGAGTGGAAGTTTAGATCT 815
Query 665 TGAGGTCCGCTTATGGAATACCACAACTTGTGAATGTATTAGATCTCATGTATTCTATCG 724
|||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||
Sbjct 816 CGAGGTCCGCTTATGGAATACCACAACTTCTGAATGCATTAGATCTCATCTATTCTATCG 875
Query 725 TCCTATTGCTTCTATAGCTTTCCATGCTGAGGGTGAACTACTTGCTGTTGCTTCTGGTCA 784
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 876 GCCTATTGCTTCTATCGCTTTCCATGCTGAGGGTGAACTACTTGCTGTTGCTTCTGGTCA 935
Query 785 TAAGCTGCACATGTAGCACTACAATAGGAGAGGAGAGGAATCATCACCAATC-GTTGTAT 843
|||||||||||||| ||||||||||||||||||||||| ||||||||||| | |||||||
Sbjct 936 TAAGCTGCACATGTGGCACTACAATAGGAGAGGAGAGGGATCATCACCAA-CTGTTGTAT 994
Query 844 TGAAGACGAGGCGCTCTCTGAGAGCTGTACACTTTCACCCTCATGGGGCACCATTTCTCT 903
||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||| || |
Sbjct 995 TGAAGACGAGGCGATCTTTGAGAGCTGTACACTTTCACCCTCATGGGGCTCCATTACTTT 1054
Query 904 TGACCGC--A---G-AGGTGAATGAAATTGATTCATTAGATTCTTCGATGTCTAGAGCAA 957
||||||| | | |||||||||| |||||||||||||||||||| |||||||||||||
Sbjct 1055 TGACCGCAGAGTGGCAGGTGAATGAGATTGATTCATTAGATTCTTCAATGTCTAGAGCAA 1114
Query 958 CATGTATGGGCTACTTGAGGTATCCGCCCCCTGCTATTTTATTCACAAGCACGGAAAGCA 1017
||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1115 CATCTATGGGCTACTTGAGGTATCCGCCCCCTGCTATTTTGTTCACAAGCACGGAAAGCA 1174
Query 1018 ATCGAACTAGTTTGGCATCAGAAAATGAGAACAGAACATCGTCTCCTCCTTTTCCCTTGG 1077
||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct 1175 ATCAAACTAGTTTGGCAGCAGAAAATGAGAACAGAACATCGTCTCCTCCTCTTCCCTTGG 1234
Query 1078 CTACATCCAGTGGTCCTTCTGGTTCAAATAGTGTTCCAGGAAATTCTCCTAGCAATATAT 1137
||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||
Sbjct 1235 CTACATCCAGTGGTCCTTCTGGTCCAAATAGTGTTCCAGGAAATTCTCCCAGCAACATAT 1294
Query 1138 TTTTTACCCGAGCTGGAGATAGAA---CTCCTGCAGTTGATGGCATCAATGTAGATGAAG 1194
|| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct 1295 TTCTTACCCGAGCTGGAGATAGAACTTCTCCTGCAGTTGATGGCATGGATGTAGATGAAG 1354
Query 1195 CTCAACCTGTTGGAAGAAACGGAATTCCTAGCCAAGTTTCAACTCGATCAGATTTCCCTG 1254
||||||||||||||||||| ||||| |||||||||||||||| | |||||||||||||||
Sbjct 1355 CTCAACCTGTTGGAAGAAATGGAATCCCTAGCCAAGTTTCAAATAGATCAGATTTCCCTG 1414
Query 1255 AGCTTGGACAGATTCGGCAATTATTTCACTTTAGGGATAGAGTTTCCTGGGAGTTACCTT 1314
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1415 AGCTTGGACAGATTCGGCAATTATTTCACTTTAGGGATCGAGTTTCCTGGGAGTTACCTT 1474
Query 1315 TTCTACAAGGATGGTTGATGGCTCAAGGTCATGGTGTTGCTAATCCAGTGGTTCCTCCTA 1374
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1475 TTCTACAAGGATGGTTGATGGCTCAAGGTCATGGTGTTGCTAATCCAGTGGTTACTCCTA 1534
Query 1375 CTGGCAGTAGTAATCATGGCATCTCAGCTCCATCTTCAACATCCAGTCTGGAGGCTGCAG 1434
|||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||
Sbjct 1535 CTGGCAGTAGTAATCATGGCATCTCAGCTCCATCCTCAACAGCCAGTCTGGAGGCTGCAG 1594
Query 1435 TAGCGTCATTAGAAATCCCGAGTGGTGTTAACTTACATGCGGTGTCTGGAAGAGGCAGAG 1494
|||||| |||||||||||||||||||||||||||||||||||||||| |||||||| | |
Sbjct 1595 TAGCGTTATTAGAAATCCCGAGTGGTGTTAACTTACATGCGGTGTCTAGAAGAGGCGGGG 1654
Query 1495 CCCAGGAACAAACTTCACAACCCCAATTCTTGGGATCTGGATTACCGGGAGGTGTGTCTT 1554
| |||||||||||||||||||||||||||| | || |||||||||||| |||||| ||||
Sbjct 1655 CTCAGGAACAAACTTCACAACCCCAATTCTCGAGAACTGGATTACCGGAAGGTGTATCTT 1714
Query 1555 CTCGTAACACGCAACATGGAAGTGATGCTCAACCTGTAGTGAACAGGGTCCAGTCTGAGC 1614
|||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct 1715 CTCGTAACACTCAACATGGAAGTGATGCTCAACCTGTAGTAAATAGGGTCCAGTCTGAGC 1774
Query 1615 TTGCTACCTCAATTGCTGCTTCGgcagcagcagcagcagcTGCTGCAGAATTACCTTGTA 1674
|||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||
Sbjct 1775 TTGCTACCTCAATTGCTGCTTC-G--GCTGCAGCAGCTGCTGCTGCAGAATTACCTTGTA 1831
Query 1675 CTGTCAAACTCAGAGTGTGGTCGCATGACATCAAAGACCCATATGCACAACTGAAATCCG 1734
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1832 CTGTCAAACTCAGAATGTGGTCGCATGACATCAAAGACCCATATGCACAACTGAAATCCG 1891
Query 1735 ACAGATGTCTATTTACAATACCGCATGATGTCCTTTGCAGTGAAATGGGAGCTCATTTTT 1794
||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||
Sbjct 1892 ACAGATGTCTATTTACAATACCGCATGCCGTCCTTTGCAGTGAAATGGGAGCTCATTATT 1951
Query 1795 CGCCATGCAGGAGATATTTAGCAGCCTGTGTTGCATGTGTTTTTCCTCATGCCGAGATAG 1854
||||||| ||||||||||||| ||||||||||| |||||||||||||||| |||||||
Sbjct 1952 CGCCATGTGGGAGATATTTAGCGGCCTGTGTTGCGTGTGTTTTTCCTCATGGTGAGATAG 2011
Query 1855 ATCCTGGACTCCAGACACAAGCCCAACAAGATTCAGGGCTTGCAACTTCCCCAACTCGAC 1914
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2012 ATCCTGGACTGCAGACACAAGCTCAACAAGATTCAGGGCTTGCAACTTCCCCAACTCGAC 2071
Query 1915 ACCCTGTCACAGCACACCAAGTCATTTACGACCTTCGTGTGTATTCTCTCCAGAAGGAAA 1974
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2072 ACCCTGTCACAGCACACCAAGTCATTTACGAGCTTCGTGTGTATTCTCTCCAGAAGGAAA 2131
Query 1975 GTTTTGGTTCAGTACTCGTGTCACGGGCAATTAGAGCTGCACATTGCTTGACCTCTATCC 2034
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2132 GTTTTGGTTCAGTACTTGTGTCACGGGCAATTAGAGCTGCACATTGCTTGACCTCTATCC 2191
Query 2035 AGTTCTCACCCACCTCGGAGCATATACTTCTTGCATATGGGCGGCGTCATGGTTCTCTTT 2094
||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2192 AGTTCTCACCCACTTCGGAGCATATACTACTTGCATATGGGCGGCGTCATGGTTCTCTTT 2251
Query 2095 TGAGGAGCATCGTTAGTGATGGTGAAGCAACATCACATTTTTTCACAGTGTTGGAGATAT 2154
|||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct 2252 TGAGGAGCATCGTTAGTGATGGTGAAACAACATCACATTTTTTCACAGTATTGGAGATAT 2311
Query 2155 ACAGAGTTTCAGATATGGAGCTTGTGAGAGTACTGCCAAGTTCAGATGATGAAGTGAATG 2214
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct 2312 ACAGAGTTTCAGATATGGAGCTTGTGAGAGTACTGCCAAGTTCAGAGGATGAAGTGAACG 2371
Query 2215 TTGCTTGTTTTCATCCTTCTCCTGGAGGAGGTCTTGTTTATGGGACAAAGGAGGGGAAAC 2274
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2372 TTGCGTGTTTTCATCCTTCTCCTGGAGGAGGTCTTGTTTATGGGACAAAGGAGGGGAAAC 2431
Query 2275 TGAGGATCTTCCAGTACAATACAGCTGCTACCTCAAACTTCACTGGACCAAACACCTAAC 2334
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2432 TGAGGATCTTCCAGTACAATACAGCTGCTACCTCAAACTTCACAGGACCAAACACCTAAC 2491
Query 2335 CTGAGGTAGCGTAGAATTATTATAAAGAAGATGCATTATAGTGTTA-GCAAGCAAGAAGC 2393
|||||||||||||||||||| ||||||||| ||||||| |||| || |||||||||||||
Sbjct 2492 CTGAGGTAGCGTAGAATTATAATAAAGAAGGTGCATTAGAGTGGTAAGCAAGCAAGAAGC 2551
Query 2394 AAACATAGGTTTCATTGAATCTTTTCCACACTCTCTT 2430
||||||||||||||| ||||||||||||| | |||||
Sbjct 2552 AAACATAGGTTTCATCGAATCTTTTCCACTC-CTCTT 2587
Score = 647 bits (350), Expect = 0.0
Identities = 430/468 (92%), Gaps = 8/468 (2%)
Strand=Plus/Plus
Query 147 TTCAAGATGACTCAATCTTTCTGTTCGTCGTCACAAGATCAATCTTCTTCTCCTCGTTCT 206
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct 226 TTCAAGATGACTCAATCTATCTGTTCGTCGTCACAAGATCAATCTTCTTCTCCTCGCTCT 285
Query 207 TTGATTC-CACCACGCAAATCGGCGACGAATTTTCACCGCCGCAGGTGGAGGAGTGTATT 265
|||| || |||||||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct 286 TTGA-TCACACCACGCAAATCGGCGACGAAGTTTCACCGCCGCAGGGGGAGGAGTGTATT 344
Query 266 TAGTATGTTGGTTCAGAGGAAAATGTCACCGAAGGCGACGTTTGTGCCAAGGAAACGGTG 325
|| ||| ||||||||||| |||||||||| ||||| | |||||||||||||||||| ||
Sbjct 345 TAACATGCTGGTTCAGAGGGAAATGTCACCAAAGGCTAAGTTTGTGCCAAGGAAACGATG 404
Query 326 GGGGAAGAGTAGATGGTATGCTGATTCTTCATGCGGAATCAACAGTGAGCCGT-TGAGAG 384
||| ||||||||||||||| |||||||||||||||||| ||||| ||| | | ||| ||
Sbjct 405 GGGTAAGAGTAGATGGTATACTGATTCTTCATGCGGAACCAACAACGAGTC-TATGAAAG 463
Query 385 AGGCGGGACAAAGTCTTACTTCATGGGTTGAGGCAGAGTCATTGCAGCATTTATCTGCAA 444
|| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 464 AGACGGGACAAAGTCTTACCTCATGGGTTGAGGCAGAGTCATTGCAGCATTTATCTGCAA 523
Query 445 AATATTATCCTCTTGGAGCTCCCCCGAGGTCGACTATTGCAGCGGCTTTTAATACTGATG 504
|||||| ||||||||||||||| || ||||| |||||||| |||||||||| ||||||||
Sbjct 524 AATATTGTCCTCTTGGAGCTCCTCCAAGGTCAACTATTGCTGCGGCTTTTAGTACTGATG 583
Query 505 GAAGAACTCTTGCTTCTACACATGGTGATCATACTGTAAAGATTATTGATTGTGAAACTG 564
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 584 GAAGAACTCTTGCTTCTACACATGGTGATCATACTGTGAAGATTATTGATTGTGAAACTG 643
Query 565 GAAACTGCTTAAAAGTTTTGAAC-GACCATCAA-AGGACTCCTTGGGT 610
||||||||||||||||||||| | | |||| | ||||||||||||||
Sbjct 644 GAAACTGCTTAAAAGTTTTGA-CTGGCCAT-AGGAGGACTCCTTGGGT 689
Score = 189 bits (102), Expect = 1e-46
Identities = 137/152 (90%), Gaps = 9/152 (6%)
Strand=Plus/Plus
Query 1 AAAAA-CACAACTGTTTAGGTTTCGTCGTCGACGCGCTC--ATCAACAAAGTCCCAGACG 57
||||| || |||||||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct 39 AAAAACCA-AACTGTTTAGGTTTCGTCGTCGACGCGCTCTCATCAACAAAGTCCCATACG 97
Query 58 AAGAAATTTAACCAATACCATATCTCGAGGGACGAAGCGCGTTACGATTTAGATCGGAGA 117
|| | ||||||||| || |||| |||||||||||||||||| ||| || ||||||||||
Sbjct 98 AA-A--TTTAACCAAAACTATATATCGAGGGACGAAGCGCGTGACG-TT-AGATCGGAGA 152
Query 118 TCACACCGAGATCGCCGGTGAATTAGGGTTTC 149
|| |||||||||||||||||||||||||||||
Sbjct 153 TCTCACCGAGATCGCCGGTGAATTAGGGTTTC 184
> AT1G04140.2 | Symbols: | Transducin family protein / WD-40 repeat
family protein | chr1:1075545-1080630 REVERSE LENGTH=3138
Length=3138
Score = 963 bits (521), Expect = 0.0
Identities = 1066/1318 (81%), Gaps = 82/1318 (6%)
Strand=Plus/Plus
Query 1056 TCGTCTCCTCCTTTTCCCTTGGCTACATCCAG-TGGTCCTTCTGGTTCAAAT-AGTGTTC 1113
||| || ||||| ||||| ||||||| | | | || || ||||||||| || | ||| |
Sbjct 1345 TCGCCTTCTCCTCTTCCCATGGCTACGT-CTGCTGATCTTTCTGGTTCCTATCA-TGTCC 1402
Query 1114 CAGGA-AATTCTCCTAGCAATATATTTTTTACCCGAGCTGGAGATAG-AA--CT-C--CT 1166
|| || || ||| |||| |||| |||| ||||| ||| |||| ||| || || | ||
Sbjct 1403 CA-GACAACTCTGCTAGTAATACATTTGCTACCCAAGCAGGAGCTAGAAATTCTACTACT 1461
Query 1167 GCAGTTGATGGCATCAATGTAGATGAAGCTCAACCTGTTGGAAGAAACGGAATTCCTAGC 1226
|||||||||| ||| ||||||||||||||||||||||||||||||| || |||| ||
Sbjct 1462 GCAGTTGATGCCATGGATGTAGATGAAGCTCAACCTGTTGGAAGAAATAGAGTTCCCAGT 1521
Query 1227 CAAGTTTCAACTCGATCAGATTTCCCTG-AGCTTGGACAGA-TTCGGCAATTATTTCACT 1284
|||||||||| || | ||||||| | || || ||||||| | ||| ||| ||||||||||
Sbjct 1522 CAAGTTTCAAGTCAACCAGATTTAC-TGGAGTTTGGACA-ACTTCAGCAGTTATTTCACT 1579
Query 1285 TTAGGGATAGAGTTTCCTGGGAGTTACCTTTTCTACAAGGATGGTTGATGGCTCAAGGTC 1344
|||| || |||| |||||||||| |||||||||||||||| ||||||||||||||| | |
Sbjct 1580 TTAGAGACAGAGGTTCCTGGGAGCTACCTTTTCTACAAGGGTGGTTGATGGCTCAAAGCC 1639
Query 1345 ATGGTGTTGCTAATCCAGTGGTTCCTCCTACTGGCAGTAGT----A----A--TCA--T- 1391
| | || ||||||| |||||| || ||||||||| |||||| | | ||| |
Sbjct 1640 AAGCTGGTGCTAATTCAGTGGCTCTTCCTACTGGTAGTAGTGGTCACGTCAACTCAACTC 1699
Query 1392 -------GG---CATCT-CAGC-TC-CAT-CTTCAACATCCAGTCTGGAGGCTGCAGTAG 1437
|| | ||| |||| || ||| | || ||| ||||||| ||||||| |||||
Sbjct 1700 CTTATATGGGTTCTTCTTCAGCATCTCATTCATCCACAGCCAGTCTAGAGGCTGGAGTAG 1759
Query 1438 CGTCATTAGAAATCCC-GAGTGGTGTTAACTTACATGCGGTGTCTGGAAGAGGCAGAG-C 1495
||||||||||||| || | |||||||||||||| ||| ||| |||| |||||| || |
Sbjct 1760 CGTCATTAGAAATTCCTG-GTGGTGTTAACTTATATGGGGTTTCTGCAAGAGGT-GACTC 1817
Query 1496 CCAGGAACAAACTTC-ACAACCCCAATTCTTGGGATCTGGATTACCGGGAGGT-GTGTCT 1553
|| ||| | || ||| ||| ||| ||| |||||||| ||| | | |||| || ||
Sbjct 1818 CCGGGACCGAA-TTCTACAGTCCCGCTTCGCAGGATCTGGTTTAGCAGAAGGTCGT-TCC 1875
Query 1554 TCTCGTAACACGCAACATGGA--AG-TGATGCTCAACCTGTAGTGAACAGGGTCCAGTCT 1610
||||||||||| ||||||| | || ||||||||||||||| || ||||| ||| |||
Sbjct 1876 TCTCGTAACACTCAACATGAAGGAGCTGATGCTCAACCTGTGGTAAACAGAATCCCTTCT 1935
Query 1611 GAGCTTGCTACCTCAATTGCTGCTTCGgcagcagcagcagcagcTGCTGCAGAATTACCT 1670
|| || |||| |||||||||||| | ||| || | ||| | |
Sbjct 1936 GAACTGGCTAGTTCAATTGCTGCT--G-CAG-AG----------T--TGC-------C-T 1971
Query 1671 TGTACTGTCAAACTCAGAGTGTGGTCGCATGACATCAAAGACCCATATGCACA-ACTGAA 1729
|||||||||||||| ||||||||||| ||||||||||||||||||| | || | ||||||
Sbjct 1972 TGTACTGTCAAACTGAGAGTGTGGTCACATGACATCAAAGACCCATGTTCA-ATACTGAA 2030
Query 1730 ATCCGACAGATGTCTATTTACAATACCGCATGATGTCCTTTGCAGTGAAATGGGAGCTCA 1789
|| |||| ||||| ||| ||||||| |||| ||| ||||||||||| |||||||| ||
Sbjct 2031 GTCTGACAAATGTCGATTAACAATACATCATGCTGTTCTTTGCAGTGAGATGGGAGCCCA 2090
Query 1790 TTTTTCGCCATGCAGGAGATATTTAGCAGCCTGTGTTGCATGTGTTTTTCCTCATGCCGA 1849
|||||| ||||| |||||||||||||||||||||||||||| ||| |||||||||| ||
Sbjct 2091 TTTTTCTCCATGTGGGAGATATTTAGCAGCCTGTGTTGCATGCGTTATTCCTCATGCTGA 2150
Query 1850 GATAGATCCTGGACTCCAGACACAAGCCCAACAAGATTCAGGGCTTGCAACTTCCCCAAC 1909
|| |||||| | | ||||||| | ||||||||| |||||||||||||||||||| ||
Sbjct 2151 GACAGATCCAAGTTTGCAGACACTGGTCCAACAAGACTCAGGGCTTGCAACTTCCCCTAC 2210
Query 1910 TCGACACCCTGTCACAGCACACCAAGTCATTTACGACCTTCGTGTGTATTCTCTCCAGAA 1969
|||||| |||||||||||||| |||||||| || || ||||||||||||||||| | ||
Sbjct 2211 TCGACATCCTGTCACAGCACATCAAGTCATGTATGAACTTCGTGTGTATTCTCTGGAAAA 2270
Query 1970 GGAAAGTTTTGGTTCAGTACTCGTGTCACGGGCAATTAGAGCTGCACATTGCTTGACCTC 2029
||| |||||||| ||||| ||||| ||||||||||| |||||||||||||| |||||
Sbjct 2271 AGAATCATTTGGTTCGGTACTTGTGTCCCGGGCAATTAGGGCTGCACATTGCTTAACCTC 2330
Query 2030 TATCCAGTTCTCACCCACCTCGGAGCATATACTTCTTGCATATGGGCGGCGTCATGGTTC 2089
||||||||||||||| ||||| ||||| || || ||||||||||| || |||||||||||
Sbjct 2331 TATCCAGTTCTCACCAACCTCCGAGCACATTCTGCTTGCATATGGTCGTCGTCATGGTTC 2390
Query 2090 TCTTTTGAGGAGCATCGTTAGTGATGGTGAAGCAACATCACATTTTTTCACAGTGTTGGA 2149
|||||||| |||||| || |||||||| ||| |||||||||||||||||||||| |||||
Sbjct 2391 TCTTTTGAAGAGCATTGTGAGTGATGGAGAAACAACATCACATTTTTTCACAGTTTTGGA 2450
Query 2150 GATATACAGAGTTTCAGATATGGAGCTTGTGAGAGTACTGCCAAGTTCAGATGATGAAGT 2209
||| |||||||||||||||||||| || ||||||||||| ||||| ||||| ||||||||
Sbjct 2451 GATTTACAGAGTTTCAGATATGGAACTGGTGAGAGTACTTCCAAGCTCAGAGGATGAAGT 2510
Query 2210 GAATGTTGCTTGTTTTCATCCTTCTCCTGGAGGAGGTCTTGTTTATGGGACAAAGGAGGG 2269
||||||||||| ||||||||||||||||| ||||||||||| ||||| |||||||||||
Sbjct 2511 TAATGTTGCTTGCTTTCATCCTTCTCCTGGGGGAGGTCTTGTCTATGGAACAAAGGAGGG 2570
Query 2270 GAAACTGAGGATCTTCCAGTACAATACAGCTGCTACCTCAAA-CTTCACTGGACCAAA 2326
||||| |||||||||| |||||| ||||||||| | || || || ||||| ||||||
Sbjct 2571 AAAACTAAGGATCTTCCGGTACAACACAGCTGCTGCGTCCAATCT-CACTGCACCAAA 2627
Score = 640 bits (346), Expect = 0.0
Identities = 696/862 (81%), Gaps = 35/862 (4%)
Strand=Plus/Plus
Query 192 TCTTCTCCTCGTTCTTTGATTCCACCACGC-AAATCGGCGACGAATTTTCACCGCC-GCA 249
||||||||||| || |||| || || || ||| | | | | ||| | || |||| | |
Sbjct 340 TCTTCTCCTCGGTCGATGATACCTTCA-GCAAAACCAGTGGCTAATGTCCATCGCCAG-A 397
Query 250 GGTGGAGGAGTGTATT-TAGTATGTTGGTTCAGAGGAAAATGTCACCGAAGGCGACGTTT 308
|||| |||||||| || ||| | | || |||||| |||| ||||| || | | ||||
Sbjct 398 GGTGTAGGAGTGTCTTCAAGT-TACTAGTCCAGAGGGAAATTTCACCAAACACAAAGTTT 456
Query 309 GTGCCAAGGAAACGGTGGGG-GAAGAGTAGATGGT-ATGCTGATTCTTCATGCGGAATCA 366
|| ||||| ||||||||||| ||| || ||| || |||||||||| || || |||| |
Sbjct 457 GTTCCAAGAAAACGGTGGGGTGAA-AGCCGAT-GTGATGCTGATTCGTCGTGTGGAA-CC 513
Query 367 AC-AGTGAGCC-GTTGAGAGAGGC-GGGAC-AAAGTCTTACTTCATGGGTTGAGGCAGAG 422
|| || || || | ||||||| || ||||| || ||||| ||| |||||||||||||||
Sbjct 514 ACTAGCGAACCAG-TGAGAGA-GCAGGGACTTAA-TCTTATTTCTTGGGTTGAGGCAGAG 570
Query 423 TCATTGCAGCATTTATCTGCAAAATATTATCCTCTTGGAGCTCCCCCGAGGTCGACTATT 482
|||||||||||||||||||| ||||| | |||||||| | |||| || ||||| || |||
Sbjct 571 TCATTGCAGCATTTATCTGCTAAATACTGTCCTCTTGTACCTCCTCCAAGGTCAACGATT 630
Query 483 GCAGCGGCTTTTAATACTGATGGAAGAACTCTTGCTTCTACACATGGTGATCATACTGTA 542
||||| ||||||| | | |||||||||||||||||||||||||||||||| || ||||||
Sbjct 631 GCAGCAGCTTTTAGTTCAGATGGAAGAACTCTTGCTTCTACACATGGTGACCACACTGTA 690
Query 543 AAGATTATTGATTGTGAAACTGGAAACTGCTTAAAAGTTTTGAAC-GACCATCAAAGGAC 601
|| |||||||||||||| || ||||| ||||||||| | |||| | | ||||| ||||||
Sbjct 691 AAAATTATTGATTGTGAGACAGGAAAATGCTTAAAAATATTGA-CTGGCCATCGAAGGAC 749
Query 602 TCCTTGGGTGGTCAGATTCCACCCGCTTCATTCAGAAATAGTTGCTAGTGGAAGTTTAGA 661
|| |||||||||||||| ||||||| || |||||||||||||||||||||||||||||
Sbjct 750 ACCCTGGGTGGTCAGATTTCACCCGCGCCACTCAGAAATAGTTGCTAGTGGAAGTTTAGA 809
Query 662 TCTTGAGGTCCGCTTATGGAATACCACAACTTGTGAATGTATTAGATCTCATGTATT-CT 720
|| |||||| |||||||||||| | | |||| | || ||||| ||| |||||| ||| ||
Sbjct 810 TCATGAGGTGCGCTTATGGAATGCAAAAACTGGGGAGTGTATCAGAACTCATG-ATTTCT 868
Query 721 ATCGTCCTATTGCTTCTATAGCTTTCCATGCTG-AGGGTGAACTACTTGCTGTTGCTTCT 779
|||| ||||||||||| || |||||||| |||| ||| |||| ||||||||||||| |||
Sbjct 869 ATCGACCTATTGCTTCCATTGCTTTCCACGCTGGAGG-TGAATTACTTGCTGTTGCATCT 927
Query 780 GGTCATAAGCTGCACATGTAGCACTACAATA-GGAGAGGAGAGGAATCATCACCAATCG- 837
||||||||| ||||||| | ||| || |||| || |||| || || || ||||| |
Sbjct 928 GGTCATAAGTTGCACATATGGCATTATAATAAGG-GAGGGGATGACTCGGCACCAG-CAA 985
Query 838 TTGTATTGAAGACGAGGCGCTCTCTGAGAGCTGTACACTTTCACCCTCATGGGGCACCAT 897
|||| |||||||| ||||| || |||||||||||||||||||| || ||||||| || |
Sbjct 986 TTGTGTTGAAGACAAGGCGGTCCCTGAGAGCTGTACACTTTCATCCACATGGGGTTCC-T 1044
Query 898 -TTCTCTTGACCGCAGAGGTGAATGAAATTGATTCATTAGATTCTTCGATGTCTAGAGCA 956
|||||||||| || ||||||| ||| |||||||||| |||||| | ||| | ||| ||
Sbjct 1045 CTTCTCTTGACTGCTGAGGTGACTGACATTGATTCATCAGATTCCGCAATGACAAGATCA 1104
Query 957 ACATGTATGGGCTACTTGAGGTATCCGCCCCCTGCTATTTTATTCAC-AAGCACGGAAAG 1015
|||| | || || ||| | |||||||||||||||||||| ||||| || ||| ||||
Sbjct 1105 ACATCTCCAGGTTATTTGCGATATCCGCCCCCTGCTATTTTCTTCACCAA-CACACAAAG 1163
Query 1016 ---CAATCGAACTAGTTTGGCA 1034
|| ||| || |||||||||
Sbjct 1164 TGGCAGTCGTACCAGTTTGGCA 1185
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 123460846723
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5