BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg494632
Length=2333
Score E
Sequences producing significant alignments: (Bits) Value
AT5G43745.1 | Symbols: | Protein of unknown function (DUF1012)... 2940 0.0
AT5G02940.1 | Symbols: | Protein of unknown function (DUF1012)... 2098 0.0
> AT5G43745.1 | Symbols: | Protein of unknown function (DUF1012)
| chr5:17569147-17574971 REVERSE LENGTH=2759
Length=2759
Score = 2940 bits (1592), Expect = 0.0
Identities = 1775/1862 (95%), Gaps = 17/1862 (1%)
Strand=Plus/Plus
Query 1 AGGAGAAGAGAGAAATTATGGTGGCTGTTCAGTTATTTACCTGGAAGCCATTGATTCT-C 59
||||||||||| |||| ||||||||||||||||| ||||| |||||||||||| |||| |
Sbjct 4 AGGAGAAGAGATAAATGATGGTGGCTGTTCAGTTGTTTACTTGGAAGCCATTGGTTCTAC 63
Query 60 --CCTT--C-A----C--GAGTAGATCGATTCGCGTCTTTTAACAGGAGCTTGAGTTTAA 108
|||| | | | || |||||||||||||||||||||||||||||||||||||||
Sbjct 64 TACCTTCACAATCTTCAAGACTAGATCGATTCGCGTCTTTTAACAGGAGCTTGAGTTTAA 123
Query 109 AGTCTCTACCTTTAGGTGGGATTGAGTCTTTTAGATCCCCAGGGACCTTCAAAGTCAAAT 168
||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 124 AGTCTCTGCCTTTAGGTGGGATTGGGTCTTTTAGATGCCCAGGGACCTTCAAAGTCAAAT 183
Query 169 CTCAGAGGACAGGAGACACTAAGCCG---TCTAGTGTTAACCTGAATGATTTCAATTCCA 225
|||||||||||||||||||| ||||| |||||||| |||||||||||||||| |||||
Sbjct 184 CTCAGAGGACAGGAGACACTGAGCCGTCTTCTAGTGTCAACCTGAATGATTTCAGTTCCA 243
Query 226 AATTCCATAAGAGGT-TTCCTTATAAACTGGTGATAGGATGCATCCCACTGTATGTGGTG 284
||| ||||||| || |||| |||||| ||||||||||||||||||||||||||| ||||
Sbjct 244 TATTGCATAAGA-GTCTTCCGTATAAAGTGGTGATAGGATGCATCCCACTGTATGCGGTG 302
Query 285 TTCAGGATAGCGCAAAAGATATGTCAAGAGCTTcccccccTCGTTCAGAACTCAGTGGGG 344
||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct 303 TTCAGGATAGCGCAAAAGATATGTCAAGAGCTTCCTCGCCTCGTTCAGAACTCAGTGGGG 362
Query 345 GCTGGCTTGCCTTTTGCTTGTGCATCGAACTCTCTACCTACTCCTCTCAAGTTGGACGTC 404
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 363 GCTGGCTTGCCTTTTGCTTGTGCATCGAACTCTCTACCTACTCCTCTCAAGTTGGATGTC 422
Query 405 TCCGTTCCTTCTTTTCAAGATATCAGATGGGGTCTTGCAAGGTTTCTTTACCTGTTCAAT 464
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 423 TCATTTCCTTCTTTTCAAGATATCAGATGGGGTCTTGCAAGGTTTCTTTACCTGTTCAAT 482
Query 465 ATTCAGCTTGAGAAGAACATTGGCACGTTCCTTGTGGCGCTCATGATAGCATGTGTATCG 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 483 ATTCAGCTTGAGAAGAACATTGGCACGTTCCTTGTGGCGCTCATGATAGCATGTGTATCG 542
Query 525 TTTGTTATCATTGGGGGACTCCTATTTTTCAAATTCAGGAAAGACCTACCATTAGAAGAC 584
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 543 TTTGTTATCATTGGGGGACTCCTATTTTTCAAATTCAGGAAAGACCTACCCTTAGAAGAC 602
Query 585 TGCCTTTGGGAAGCCTGGGCATGCCTCATATCCTCTTCTACTCATCTGAAGCAAAAGACA 644
||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 603 TGCCTCTGGGAAGCCTGGGCATGCCTCATTTCCTCTTCTACTCATCTTAAGCAAAAGACA 662
Query 645 CGCATTGAAAGAGTCATTGGATTTGTCCTAGCCATTTGGGGAATATTGTTTTACTCTCGG 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 663 CGCATTGAAAGAGTCATTGGATTTGTCCTAGCCATTTGGGGAATATTGTTTTACTCTCGG 722
Query 705 CTTTTAAGCACAATGACAGAACAATTTCGGTATAATATGACAAAACTGAGGGAAGGGGCA 764
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 723 CTATTAAGCACAATGACAGAACAATTTCGGTATAATATGACAAAACTGAGGGAAGGGGCA 782
Query 765 CAGATGCAAGTCCTAGAAGCTGATCATATCATCATTTGTGGAATAAACAGTCATCTACCT 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 783 CAGATGCAAGTCCTAGAAGCTGATCATATCATCATTTGTGGAATAAACAGTCATCTACCT 842
Query 825 TTCATACTAAAGCAACTGAACAGCTACCATGAGCATGCTGTCCGCTTAGGTACCGCTACA 884
||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||
Sbjct 843 TTCATACTAAAGCAACTGAACAGTTATCATGAGCATGCTGTCCGCTTAGGTACCGCCACA 902
Query 885 GCTAGGAAGCAGAGACTTCTACTCATGTCTGATACTCCAAGGAAGCAGATGGACAAGCTA 944
||||||||||| |||||||| |||||||| |||||||||||||| |||||||||||||||
Sbjct 903 GCTAGGAAGCAAAGACTTCTGCTCATGTCCGATACTCCAAGGAAACAGATGGACAAGCTA 962
Query 945 GCTGAGGCGTACTCCAGAGATTTTAATCATATTGACATCCTTACAAAGAGTTGTAGTCTT 1004
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GCTGAGGCGTACTCCAAAGATTTTAATCATATTGACATCCTTACAAAGAGTTGTAGTCTT 1022
Query 1005 AACATGACGAAATCATTTGAGAGGGCTGCTGCCTCTATGGCACGTGCTATTATCATACTA 1064
||| ||||||||||||||||||||||||| ||||||||||| ||||| ||||| ||||||
Sbjct 1023 AACCTGACGAAATCATTTGAGAGGGCTGCCGCCTCTATGGCGCGTGCCATTATTATACTA 1082
Query 1065 CCAACGAAAGGTGATAGGTATGAAGTTGATACAGATGCATTTCTTTCTGTATTAGCCCTT 1124
||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 1083 CCAACGAAAGGTGATCGGTATGAAGTTGATACAGACGCATTTCTTTCTGTATTGGCCCTT 1142
Query 1125 CAACCTATACAAAAGATTGAATCGATCCCAACCATTGTAGAGGTATCAAGCCCTAATACG 1184
||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||
Sbjct 1143 CAACCTATACAAAAGATGGAATCGATCCCAACCATAGTAGAGGTATCAAGTCCTAATACG 1202
Query 1185 TATGATCTTCTCAAGTCTATTTCGGGATTGAAAGTGGAGCCGGTTGAAAATGTTACGTCC 1244
|| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1203 TACGATCTTCTCAAGTCCATTTCGGGATTGAAAGTGGAGCCGGTTGAAAATGTTACGTCC 1262
Query 1245 AAATTATTTGTCCAATGCTCACGTCAAAAAGACCTGATAAAGATCTACAGGCACCTACTA 1304
||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1263 AAATTGTTTGTCCAATGCTCACGTCAAAAAGACCTTATAAAGATCTACAGGCACCTACTA 1322
Query 1305 AATTACTCAAAAAATGTATTTAATCTTTGCAGCTTCCCCAATCTAGCTGGGACGAAGTAT 1364
|||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||
Sbjct 1323 AATTACTCAAAAAATGTATTTAATCTTTGCAGCTTCCCCAATCTAGTTGGGACAAAGTAT 1382
Query 1365 AGACAATTAAGACTGGGGTTCCAGGAGGTTGTGGTCTGTGGCCTTTTACGAGATGGGAAA 1424
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1383 AGACAACTAAGACTGGGGTTCCAGGAGGTTGTGGTCTGTGGCCTTTTACGAGATGGGAAA 1442
Query 1425 GTAAATTTCCACCCAAATGATAACGAAGAGCTCATGGAAACCGACAAACTATTGTTTATC 1484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1443 GTAAATTTCCACCCAAATGATAACGAAGAGCTCATGGAAACCGACAAACTATTGTTTATC 1502
Query 1485 GCACCTCTGAATTGGAAAAAGAAGCAACTATTATATGCAGACATGAAACTTGAGAACATT 1544
|||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1503 GCACCTCTCAATTGGAAAAAGAAGCAACTATTATATACAGACATGAAACTTGAGAACATT 1562
Query 1545 ACAGTTGCGACTGATACTCGGAAGCAAGTGTTTGAGaaaaaaaGATCAAGGCTAGCAAAA 1604
||||| ||||||||||||||||||||||||||||||||||||||||| ||||| | ||
Sbjct 1563 ACAGTACCGACTGATACTCGGAAGCAAGTGTTTGAGAAAAAAAGATCACGGCTATCGAAG 1622
Query 1605 ATTATAATGCGTCCTCGTAAGTCTTTATCAAAGGGATCAGATTCCATCAAAGGACCCACA 1664
||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct 1623 ATTATAATGCGTCCTCGTAAGTCCTTATCAAAGGGATCAGATTCCGTCAAAGGACCCACA 1682
Query 1665 GAATCTATACTTTTACTTGGTTGGCGTGGAGACGTTGTGCAAATGATCGAGGAGTTTGAT 1724
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1683 GAATCTATACTTTTACTTGGTTGGCGTGGAGACGTTGTGCAAATGATTGAGGAGTTTGAT 1742
Query 1725 AACTATCTTGGTCCAGGCAGTTCAATGGAAATATTATCGGATGTACCGTTAGAGGACAGA 1784
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1743 AACTATCTTGGTCCAGGCAGTTCAATGGAAATATTATCGGATGTATCGTTAGAGGACAGA 1802
Query 1785 AGAAGAGTGGGAGATAGTATGGGTTCAGTGAAAATTAAGAACATCCAAGTTTCACATAAG 1844
||||| ||||| |||||||| |||||||| ||||| ||||||||||||||||||||||||
Sbjct 1803 AGAAGGGTGGGTGATAGTATAGGTTCAGTTAAAATCAAGAACATCCAAGTTTCACATAAG 1862
Query 1845 GT 1846
||
Sbjct 1863 GT 1864
Score = 625 bits (338), Expect = 7e-178
Identities = 390/415 (94%), Gaps = 3/415 (1%)
Strand=Plus/Plus
Query 1848 CATAATCTAGCCTCTGAAATCGTCGACACAAAACTTGGCAAGCAGATAACAAGACTCAAG 1907
||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||
Sbjct 2070 CATAATCTAGCCTCTGAAATCGTCGACTCAAAACTCGGCAAGCAGATAACAGGACTCAAG 2129
Query 1908 CCATCGTTAACTTTCATAGCGGCAGAGGAAGTTATGAGCCTTGTAACAGCACAAGTTGCT 1967
|| || ||||||||||||| ||||||||||||||||| || ||||||||||||||||||
Sbjct 2130 CCGTCCCTAACTTTCATAGCAGCAGAGGAAGTTATGAGTCTCGTAACAGCACAAGTTGCT 2189
Query 1968 GAAAATAGCGAACTGAACGAGGTGTGGAAGGACATTCTAGATGCAGATGGTGATGAGATA 2027
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2190 GAAAACAGCGAACTGAACGAGGTGTGGAAGGACATTCTAGACGCAGATGGTGATGAGATA 2249
Query 2028 TACGTAAAGGACATTGAACTGTACATGAAAGAGGGCGAGAGCCCTTCATTCACTGAGCTC 2087
|||||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 2250 TACGTAAAGGACGTTGAACTGTACATGAAAGAGGGGGAGAACCCTTCATTCACTGAGCTC 2309
Query 2088 TCAGAGCGAGCTTGGCTAAGGAGAGAAGTCGCCATAGGCTACATAAAAGGCGGTAAAAAG 2147
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2310 TCAGAGCGAGCTTGGCTAAGGAGAGAAGTCGCCATAGGCTACATTAAAGGCGGTAAAAAG 2369
Query 2148 ATAATCAATCCGGTTCCAAAGACA-GAACCTCTCTCCCTTGAAAAGGACGACTCATTGAT 2206
|| ||||||||||||||||||| | |||||||||||||| |||| ||| |||||||||||
Sbjct 2370 ATGATCAATCCGGTTCCAAAGA-ATGAACCTCTCTCCCTCGAAATGGATGACTCATTGAT 2428
Query 2207 TGTTATATCAGAGCTTGAAGGAGACCAACCCATCGCACTATGAAAATATATTACA 2261
|||||||||||||||||||||||||||||| ||| ||||||||| |||||| |||
Sbjct 2429 TGTTATATCAGAGCTTGAAGGAGACCAACCAATCACACTATGAATATATAT-ACA 2482
> AT5G02940.1 | Symbols: | Protein of unknown function (DUF1012)
| chr5:684474-689702 REVERSE LENGTH=2667
Length=2667
Score = 2098 bits (1136), Expect = 0.0
Identities = 1645/1881 (87%), Gaps = 74/1881 (4%)
Strand=Plus/Plus
Query 1 AGGAGAAGA--GAGAAATTATGGTGGCTGTTCAGTTATTTACCTGGAAGCCATTGATTCT 58
||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct 11 AGGAGAAGATTAAGAAA-GATGGTGGCTGTTCAGTTGTTTACCTGGAAGCCATTGATTCT 69
Query 59 -CCCT-TC-A-C---G---AGTAGATCGATTCGCGTCTTTTAACAGGAGCTTGAGTTTAA 108
|| | || | | | || ||||||||| || |||||| |||||||||||||||||
Sbjct 70 ACCTTCTCAAGCTTTGACAAG-AGATCGATTAGCTTCTTTTCACAGGAGCTTGAGTTTAC 128
Query 109 AGTCTCTACCTTTAGGTGGGATTGAGTCTTTTAGATCCCCAGGGACCTTCAAAGTCAAAT 168
| ||||| ||||||||||||||| |||||| ||| | | ||||||||||||||||||||
Sbjct 129 ACTCTCTGCCTTTAGGTGGGATTAAGTCTTCTAGTTTCAGAGGGACCTTCAAAGTCAAAT 188
Query 169 CTCAGAGGACAGGAGACACTA-AGCCGTCTAGTGTTAACCTGAATGATTTCAATTCCAAA 227
|||| ||||||||||| || | ||||| ||| | ||| | || ||||| |||||||||
Sbjct 189 CTCAAAGGACAGGAGATAC-AGAGCCGCCTAATAAAAACTTCAAAGATTTAAATTCCAAA 247
Query 228 TTCCATAAGAGGT-TTCCTTATAAACTGGTGATAGGATGCATCCCACTGTATGTGGTGTT 286
||| |||||| || |||| |||||||| ||||||||||||||||||||||||| ||||||
Sbjct 248 TTCTATAAGA-GTCTTCCATATAAACTTGTGATAGGATGCATCCCACTGTATGCGGTGTT 306
Query 287 CAGGATAGCGCAAAAGATATGTCAAGAGCTTcccccccTCGTTCAGAACTCAGTGGGGGC 346
|| |||||||||||||||| |||||||||||| ||| ||||||| |||||| |||
Sbjct 307 GAGAATAGCGCAAAAGATATTTCAAGAGCTTCCAAATCTCATTCAGAATTCAGTGAAGGC 366
Query 347 TGGCTTGCCTTTTGCTTGTGCATCGAACTCTCT--ACCTAC-TCCTCTCAAGTTGGACGT 403
||||||||||||||| |||||||| ||| || | || || |||| | | | | |
Sbjct 367 TGGCTTGCCTTTTGCATGTGCATCAAACGCTATAGACAAACATCCT-T-TA-CT-CAAG- 421
Query 404 CTCCGTTCCTTCTTTTCAAGATATCAGATGGGGTCTTGCAAGGT-TTCTTTACCTGTTCA 462
|| ||||||||| || ||||||| ||||||||||||||||| ||| |||||| ||||
Sbjct 422 -GCCATTCCTTCTTCCCATGATATCAAATGGGGTCTTGCAAGGTCTTC-TTACCTCTTCA 479
Query 463 ATATTCAGCTTGAGAAGAACATTGGCACGTTCCTTGTGGCGCTCATGATAGCATG-TGTA 521
||| |||||||||||||||| |||||||| | |||||| |||| ||||| |||| | |
Sbjct 480 ATACTCAGCTTGAGAAGAACCTTGGCACGGTATTTGTGGTGCTCCTGATAACATGCT-TT 538
Query 522 TCGTTTGTTATCATTGGGGGACTCCTATTTTTCAAATTCAGGAAAGAC-CTA-CCATTAG 579
||||||||||||||||| |||||| | ||||||||||||||||||||| | | || ||||
Sbjct 539 TCGTTTGTTATCATTGGAGGACTCTTCTTTTTCAAATTCAGGAAAGACAC-ATCC-TTAG 596
Query 580 AAGACTGCCTTTGGGAAGCCTGGGCATGCCTC-ATATCCTCTTCTACTCATCTGAAGCAA 638
|||||||||| ||||| ||||||||||||||| || | || |||||||||| |||||
Sbjct 597 AAGACTGCCTCTGGGAGGCCTGGGCATGCCTCGTTA-ACGCTGATACTCATCTGGAGCAA 655
Query 639 AAGACACGCATT-GAAAGAGTCATTGGATTTGTCCTAGCCATTTGGGGAATATTGTTTTA 697
||||||||| || |||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct 656 AAGACACGC-TTCGAAAGACTCATTGGATTTGTCCTAGCCATTTGGGGAATAGTGTTTTA 714
Query 698 CTCTCGGCTTTTAAGCACAATGACAGAACAATTTCGGTATAATATGACAAAACTGAGGGA 757
||||||||||||||||||||||||||| |||||||||||| |||||| |||| |||||||
Sbjct 715 CTCTCGGCTTTTAAGCACAATGACAGAGCAATTTCGGTATCATATGAAAAAAGTGAGGGA 774
Query 758 AGGGGCACAGATGCAAGTCCTAGAAGCTGATCATATCATCATTTGTGGAATAAACAGTCA 817
||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct 775 AGGGGCACATATGCAAGTCCTAGAATCTGACCATATCATCATTTGTGGAATAAACAGTCA 834
Query 818 TCTACCTTTCATACTAAAGCAACTGAACAGCTACCATGAGCATGCTGTCCGCTTAGGTAC 877
||| |||||||||||||||||||| ||||| || || ||||||||||||||||||||||
Sbjct 835 TCTGCCTTTCATACTAAAGCAACTCAACAGTTATCAACAGCATGCTGTCCGCTTAGGTAC 894
Query 878 CGCTACAGCTAGGAAGCAGAGACTTCTACTCATGTCTGATACTCCAAGG-AAGCAGATGG 936
| | |||||||||||||||| |||||| ||||||||||||||||||||| ||| ||||||
Sbjct 895 CACCACAGCTAGGAAGCAGACACTTCTGCTCATGTCTGATACTCCAAGGAAAG-AGATGG 953
Query 937 ACAAGCTAGCTGAGGCGTACTCCAGAGATTTTAATCATA-TTGACATCCTTACAAAGAGT 995
|||||||||||||||||||| ||| ||||||| |||| | ||||||||||||||||||||
Sbjct 954 ACAAGCTAGCTGAGGCGTACGCCAAAGATTTTGATCA-ACTTGACATCCTTACAAAGAGT 1012
Query 996 TGTAGTCTTAACATGACGAAATCATTTGAGAGGGCTGCTGCCTCTATGGCACGTGCTATT 1055
||||||||||||||||| ||||| ||||| |||||||| |||| |||||| || || |||
Sbjct 1013 TGTAGTCTTAACATGACAAAATCGTTTGAAAGGGCTGCCGCCTGTATGGCGCGCGCCATT 1072
Query 1056 ATCATACTACCAACGAAAGGTGATAGGTATGAAGTTGATACAGATGCATTTCTTTCTGTA 1115
|||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct 1073 ATCATACTACCAACGAAAGGTGATCGGTATGAAGTTGATACAGACGCATTTCTTTCTGTA 1132
Query 1116 TTAGCCCTTCAACCTATACAAAAGATTGAATCGATCCCAACCATTGTAGAGGTATCAAGC 1175
|| |||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 1133 TTGGCCCTTGAACCTATACAAAAGATGGAATCCATCCCAACCATTGTAGAGGTATCAAGC 1192
Query 1176 CCTAATACGTATGATCTTCTCAAGTCTATTTCGGGATTGAAAGTGGAGCCGGTTGAAAAT 1235
|||||| |||||||||||||||||| || ||||| ||||||||||||||||||||||||
Sbjct 1193 TCTAATATGTATGATCTTCTCAAGTCCATATCGGGGTTGAAAGTGGAGCCGGTTGAAAAT 1252
Query 1236 GT-TACGTCCAAATTATTTGTCCAATGCTCACGTCAAAAAGACCTGATAAAGATCTACAG 1294
| ||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1253 -TCTACATCCAAATTGTTTGTCCAATGCTCACGTCAAAAGGACCTGATAAAGATCTACAG 1311
Query 1295 GCACCTACTAAATTACTCAAAAAATGTATTTAATCTTTGCAGCTTCCCCAATCTAGCTGG 1354
||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct 1312 GCACCTACTAAATTACTCAAAAAATGTATTTAACCTTTGCAGCTTCCCCAATCTAACTGG 1371
Query 1355 GACGAAGTATAGACAATTAAGACTGGGGTTCCAGGAGGTTGTGGTCTGTGGCCTTTTACG 1414
|| |||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 1372 GATGAAGTATAGACAGTTAAGACTGGGGTTCCAGGAGGTTGTGGTCTGTGGGATTTTAAG 1431
Query 1415 AGATGGGAAAGTAAATTTCCACCCAAATGATAACGAAGAGCTCATGGAAACCGACAAACT 1474
||||||||||||||||||||| ||||||||| | ||||||||||||||||| ||||||||
Sbjct 1432 AGATGGGAAAGTAAATTTCCATCCAAATGATGATGAAGAGCTCATGGAAACTGACAAACT 1491
Query 1475 ATTGTTTATCGCACCTCTGAATTGGAAAAAGAAGCAACTATT-ATATGCAGACATGAAA- 1532
||||||||| |||||||| || | || | | | || || |||| |||||||||||
Sbjct 1492 ATTGTTTATTGCACCTCTCAA--G-AA---G--G-A-CTTTTTATATACAGACATGAAAA 1541
Query 1533 CTTGAGAACATTACAGT---TGCGACTGAT-A--CTCGGAAGCAAGTGTTTGAG-aaaaa 1585
|| |||||||| ||||| || ||||||| | ||||||||||||||| |||| |||||
Sbjct 1542 CT-GAGAACATGACAGTAGATGAGACTGATGATACTCGGAAGCAAGTGTATGAGGAAAAA 1600
Query 1586 aaGATCAAGGCTAGCAAAA-ATTATAATGCGTCCTCGTAAGTCTTTATCAAAGGGATCAG 1644
|| |||| |||||| |||| ||||||| ||||||| ||||||| ||||||||||||||||
Sbjct 1601 AA-ATCACGGCTAG-AAAAGATTATAACGCGTCCTAGTAAGTCCTTATCAAAGGGATCAG 1658
Query 1645 ATTCCATCAAAGGACCCACAGAATCTATACTTTTACTTGGTTGGCGTGGAGACGTTGTGC 1704
|||| |||||||||||| ||||||||||||||| ||||||||||||||||| ||||||
Sbjct 1659 ATTCTTTCAAAGGACCCAAAGAATCTATACTTTTGCTTGGTTGGCGTGGAGATGTTGTG- 1717
Query 1705 AA-ATGATCGAGGAGTTTGATAACTATCTTGGTCCAGGCAGTTCAATGGAAATATTATCG 1763
|| |||||| |||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 1718 AATATGATCAAGGAGTTTGATAGTTATCTTGGTCCAGGCAGTTCATTGGAAATATTATCA 1777
Query 1764 GATGTACCGTTAGAGGACAGAAGAAGAGTGGGAG-ATAGTATGGGTTCAGTGAAAATT-A 1821
|||||||||||||||||||||||| |||||| | | ||||| | | ||| ||||| | |
Sbjct 1778 GATGTACCGTTAGAGGACAGAAGAGGAGTGG-ACCAGAGTATAGCTACAG-GAAAAATCA 1835
Query 1822 AGAACATCCAAGTTTCACATA 1842
|||||||||||||||||||||
Sbjct 1836 AGAACATCCAAGTTTCACATA 1856
Score = 608 bits (329), Expect = 7e-173
Identities = 387/416 (93%), Gaps = 0/416 (0%)
Strand=Plus/Plus
Query 1841 TAAGGTACATAATCTAGCCTCTGAAATCGTCGACACAAAACTTGGCAAGCAGATAACAAG 1900
||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct 2062 TAAGGTACATAATCTAGCCTCTGAAATTGTCGACACAAAACTCGGCAAGCAGATAACAAG 2121
Query 1901 ACTCAAGCCATCGTTAACTTTCATAGCGGCAGAGGAAGTTATGAGCCTTGTAACAGCACA 1960
||||||||| || || || |||||||| ||||||||||||||||| ||||||||||||||
Sbjct 2122 ACTCAAGCCGTCCTTGACATTCATAGCAGCAGAGGAAGTTATGAGTCTTGTAACAGCACA 2181
Query 1961 AGTTGCTGAAAATAGCGAACTGAACGAGGTGTGGAAGGACATTCTAGATGCAGATGGTGA 2020
|||||||||||| |||||||| |||||||| |||||||||||| | |||||||| |||||
Sbjct 2182 AGTTGCTGAAAACAGCGAACTAAACGAGGTATGGAAGGACATTTTGGATGCAGAGGGTGA 2241
Query 2021 TGAGATATACGTAAAGGACATTGAACTGTACATGAAAGAGGGCGAGAGCCCTTCATTCAC 2080
|||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct 2242 TGAGATATACGTAAAGGACATTGAACTGTATATGAAAGAGGGCGAGAACCCTTCATTCAC 2301
Query 2081 TGAGCTCTCAGAGCGAGCTTGGCTAAGGAGAGAAGTCGCCATAGGCTACATAAAAGGCGG 2140
||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2302 GGAGCTTTCAGAGCGAGCTTGGCTAAGGAGAGAAGTTGCCATAGGCTACATAAAAGGCGG 2361
Query 2141 TAAAAAGATAATCAATCCGGTTCCAAAGACAGAACCTCTCTCCCTTGAAAAGGACGACTC 2200
||||||||||||||||||||||||||||||||||||| | ||||| |||| ||| |||||
Sbjct 2362 TAAAAAGATAATCAATCCGGTTCCAAAGACAGAACCTGTTTCCCTCGAAATGGAAGACTC 2421
Query 2201 ATTGATTGTTATATCAGAGCTTGAAGGAGACCAACCCATCGCACTATGAAAATATA 2256
|||||||||||||||||||||||||||||||||| ||| |||||||||| ||||
Sbjct 2422 ATTGATTGTTATATCAGAGCTTGAAGGAGACCAAGTTATCACACTATGAAACTATA 2477
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 115812657315
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5