BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg494645
Length=3428
Score E
Sequences producing significant alignments: (Bits) Value
AT5G43560.1 | Symbols: | TRAF-like superfamily protein | chr5:... 4905 0.0
AT1G04300.3 | Symbols: | TRAF-like superfamily protein | chr1:... 1219 0.0
AT5G52330.1 | Symbols: | TRAF-like superfamily protein | chr5:... 771 0.0
AT4G16045.1 | Symbols: | TRAF-like superfamily protein | chr4:... 296 9e-79
> AT5G43560.1 | Symbols: | TRAF-like superfamily protein | chr5:17500542-17505646
FORWARD LENGTH=3789
Length=3789
Score = 4905 bits (2656), Expect = 0.0
Identities = 3098/3309 (94%), Gaps = 39/3309 (1%)
Strand=Plus/Plus
Query 141 CAGGGGAATGTCTGAGAGTACTAATGAAGATTGTGGAGCAGGAAGATCATCAGTGGATGA 200
|||||||||||| |||||||||||||||||| |||||||||||||||||||| |||| ||
Sbjct 495 CAGGGGAATGTCAGAGAGTACTAATGAAGATAGTGGAGCAGGAAGATCATCACTGGAAGA 554
Query 201 GAATTCAAATGGACAAAGAAGTCAATCAGAAGAAGTACTAGCGGAATGGCGGTCGTCTGA 260
||||||||||||||||||||||||||||||||||| | | || || ||||| || |||||
Sbjct 555 GAATTCAAATGGACAAAGAAGTCAATCAGAAGAAGCAATCGCTGAGTGGCGTTCTTCTGA 614
Query 261 TCAAGTGGAGAATGGAACTCCTTCAACATCGCCACCGTATTGGGACATCGATGATGATGA 320
||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 615 ACAAGTTGAGAATGGAACTCCTTCTACATCTCCACCGTATTGGGACATCGATGATGAT-- 672
Query 321 CGACGATTTTGGATCAAAACCATCTGAACTATTTGGGAAAAATACTTGGACGATTGAGAA 380
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 673 -GACGATTTTGGATCAAAACCATCTCAACTATTTGGGAAAAATACTTGGACGATTGAGAA 731
Query 381 ATTTTCAGAAATTAACAAACGGGAGCTCCGTGGCGATGTTTTTGAAGTTGGGGGCTACAA 440
||||||||| || |||||||| |||||||| ||||||||||||||||| ||||| |||||
Sbjct 732 ATTTTCAGATATCAACAAACGAGAGCTCCGCGGCGATGTTTTTGAAGTCGGGGGTTACAA 791
Query 441 ATGGTATATATTAATTTATCCACAAGGGTGTGATGTTTGCAACCATCTCTCTTTGTTTCT 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 792 ATGGTATATATTAATTTATCCACAAGGGTGTGATGTTTGCAACCATCTCTCTTTGTTTCT 851
Query 501 CTGTGTTGCACACCATGAAAAACTTCTTCCAGGCTGGAGTCATTTTGCTCAGTTTACTAT 560
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 852 ATGTGTTGCACACCATGAAAAGCTTCTTCCAGGCTGGAGTCATTTTGCTCAGTTTACTAT 911
Query 561 AGCTGTGTCGAATAAAGATCCAAAGAAATCAAAGCATTCAGATACGTTACACCGGTTTTG 620
||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 912 AGCTGTGTCGAATAAAGATCCGAAGAAGTCAAAGCATTCAGATACGTTACACCGGTTTTG 971
Query 621 GAAAAAAGAACATGATTGGGGATGGAA-AAAGTTTATTGAGTCACCTAAATTAAAGGAAG 679
||| ||||| ||||||||||| ||||| ||| |||||||||| ||||||||| |||||||
Sbjct 972 GAAGAAAGAGCATGATTGGGGTTGGAAGAAA-TTTATTGAGTTACCTAAATTGAAGGAAG 1030
Query 680 GGTTCATAGATGATTATGATTGTCTTACAATTAAGGCTCAAGTCCAGGTGATCAGAGAGA 739
|||| |||||||||| || ||||||||||||||| |||||||| ||||||||||||||||
Sbjct 1031 GGTTTATAGATGATTCTGGTTGTCTTACAATTAAAGCTCAAGTGCAGGTGATCAGAGAGA 1090
Query 740 GGGTGGACCGACCTTTTCGCTGCCTTCATTATAAGTATAGGGAGGAACTTGTTCGGGTGT 799
| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct 1091 GAGTGGACCGACCTTTTCGCTGCCTTCATTATAAATATAGGGAGGAACTTGTTAGGGTGT 1150
Query 800 ATTTGACAAATGTAGAGCAAATTTGCTGGCGGTTTGTGGAAGAGAAAAGAAGCAAGCTTG 859
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1151 ATTTGGGAAATGTAGAGCAAATTTGCTGGCGGTTTGTGGAAGAGAAAAGAAGCAAGCTTG 1210
Query 860 GTAGGTTGATAGAGGACAAGGCAAAATGGAAAAGCTTCTGTGCTTTCTGGATGGGGTTGG 919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1211 GTAGGTTGATAGAGGACAAGGCAAAATGGAAAAGCTTCTGTGCTTTCTGGATGGGGTTGG 1270
Query 920 ACCAAAATTCAAGGCGTCGAATGTCCCGAGAGAAAATGGATGTGATTCTAAAAATAGTTG 979
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1271 ACCAAAATTCAAGGCGTCGAATGTCCCGAGAGAAAATGGATGTGATTCTAAAAATAGTTG 1330
Query 980 TAAAACAATTCTTCATTGAGAAGGAAGTTACATCTACTTTGGTGATGGATTCCTTGTATA 1039
||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1331 TAAAACACTTCTTTGTCGAGAAGGAAGTTACATCTACTTTGGTGATGGATTCCTTGTATA 1390
Query 1040 GTGGGTTGAAGGCTCTTGAAGGCCAAATTAAGAACAAGAAAACTAGGCCGAGACTAATGG 1099
|||| |||||||||||||||||||||| |||||||||| | | |||||||||||||||||
Sbjct 1391 GTGGATTGAAGGCTCTTGAAGGCCAAAATAAGAACAAGGAGAGTAGGCCGAGACTAATGG 1450
Query 1100 ATACTGAAGAATTGC-CAGCTCCAATTGTTAGTGTGGACAAAGATACGTTTGCATTAGTT 1158
|||||||||||| | |||||||||||||||| |||||||||||| ||||||||||||||
Sbjct 1451 ATACTGAAGAATC-CACAGCTCCAATTGTTAGCGTGGACAAAGATTCGTTTGCATTAGTT 1509
Query 1159 GATGATGTGTTATTACTCTTAGAGAGGGCTGCTGTGGAGCCATTGCCTACAAAAGAGGAA 1218
||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||
Sbjct 1510 GATGATGTGTTATTACTCTTAGAGAAGGCTGCTCTGGAGCCATTGCCTAAAAAAGAGGAA 1569
Query 1219 AAAAGTCCCCAAAACCGCACGAAGGATGGGAATGCTGGAGAGGAATTCAGTAGAGAAGCC 1278
|| ||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1570 AAGAGTTCTCAAAACCGTACGAAGGATGGGAATGCTGGAGAGGAATTCAGTAGAGAAGCC 1629
Query 1279 ATTGAGCGTGATGAGAGGCGTTTAACTGAGTTGGGTAGACGGACTGTGGAGATATTTGTT 1338
||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1630 GTTGAGCGTGATGATAGGCGTTTAACTGAATTGGGTAGACGGACTGTGGAGATATTTGTT 1689
Query 1339 CTTGCACATATCTTCAGCAACAAAATTGAAGTTGCATACCAAGAAGCTATTGCATGGAAA 1398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1690 CTTGCACATATCTTCAGCAACAAAATTGAAGTTGCATACCAAGAAGCTATTGCATGGAAA 1749
Query 1399 CGGCAAGAAGAACTTATTCGTGAAGAGGAGGAAGCGTGGCTGGCAGAAAGCGAACAGAAG 1458
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1750 AGGCAAGAAGAACTTATTCGTGAAGAAGAGGAAGCGTGGCTGGCAGAAAGCGAACAGAAG 1809
Query 1459 GCCaaaagaggaccatccgaaaaagagaagaaatctaagaagaaacaggcgaaacagaaa 1518
| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1810 GGCAAAAGAGGAGCATCTGAAAAAGAGAAGAAATCTAAGAAGAAACAGGCGAAACAGAAA 1869
Query 1519 aagaacaaaaacaaaggaaaggaaaaaaagaaagaagagaaggtgaaaacccaaacagaa 1578
||||||||||||||||||||||||| | ||||||||| ||||||| |||||||||||||
Sbjct 1870 AAGAACAAAAACAAAGGAAAGGAAATGAGGAAAGAAGACAAGGTGAGAACCCAAACAGAA 1929
Query 1579 gaaagggatattgagaaagaggaaTGTGTGAGAGCGAAAGCAGAATCGTCAGCTGAAAAA 1638
|||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1930 GAAAGGGAAATTGAGAAAGAGGAATGTGTGAGAGCGATAGCAGAATCGTCAGCTGAAAAA 1989
Query 1639 CCTGACACACTTGGAGATGTCTCTGACCTTTCTGATTCAGTAGATAGTTCAGCTGAAATA 1698
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct 1990 CCTGACACACTTGGAGATGTCTCTGACGTGTCTGATTCAGTAGATAGTTCAGCTGAAATA 2049
Query 1699 CTTCAGCTTGATTCAGAAGATAGAGAGAGTAGTCCTGTTCATTGGGAAATAGATGCCTCA 1758
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2050 CTTCAGCTTGATTCAGAAGATAGAGAGAGTAGTCCTGTTCATTGGGAAATGGATGCCTCA 2109
Query 1759 GAGATTAATCCTCTTTCTTCAGGAGACACTAGCAGAGGAAGAGGCAATTCCTTATGTATA 1818
||| || |||||| |||| ||||||||||||||||||||||||||||||| || | ||||
Sbjct 2110 GAGGTTCATCCTCCTTCTGCAGGAGACACTAGCAGAGGAAGAGGCAATTCTTTTTCTATA 2169
Query 1819 CCTAATGGAGTTGCAGCAGAAAGAAAAGGTCTGTCCACAATGGATGATAGTTCTTCAACC 1878
|||||||||||||||| | || |||| |||||||||||||||||||||||||||||||||
Sbjct 2170 CCTAATGGAGTTGCAG-A-AA-GAAAGGGTCTGTCCACAATGGATGATAGTTCTTCAACC 2226
Query 1879 TGTTCTAATGACTTGATA-AGATCAGGGGTAGCCAATGGGTCATACAAAGGGAATGTAGT 1937
||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||| |
Sbjct 2227 TGTTCTAATGACTCGATTCA-ATCAGGGGTAGCCAATGGGTCATACAAAGGGAATGTATT 2285
Query 1938 AAATTGCCAAAGCCAGAAGTGGCATATCAATGGAAAAACACAACCAGGAAAAGTATCTGA 1997
||||||||||||||| |||||| || ||||||||||| |||||||||||||||||||||
Sbjct 2286 AAATTGCCAAAGCCAAAAGTGGTTTAGCAATGGAAAAATACAACCAGGAAAAGTATCTGA 2345
Query 1998 TGCCAGCAGTTTAGCCAGTGAAAAAGAGGATCAACCTTCAAGACCTGCGTCTGACCCTAA 2057
| ||| |||||||||||||||||||||| ||||||||||||||| ||| |||||||||||
Sbjct 2346 TTCCAACAGTTTAGCCAGTGAAAAAGAGCATCAACCTTCAAGACTTGCATCTGACCCTAA 2405
Query 2058 AAATCAGAGCCATTCTTCTGAGAAACGCAGAGTTGGTGAAGCTGATGCGGTTATCTCCCA 2117
||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||
Sbjct 2406 AAATCAGAGCCATTCTTCTGATATACGCAGAGTTGGTGAAGCTGACATAGTTATCTCCCA 2465
Query 2118 CATTCAAAAACCAGAGAGCCCGGGGGAACGTAGTCCTGTTAGCAAGGATCCCAACATGAT 2177
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2466 CATTCAAAAACCAGAGAGCCCTAAGGAACGTAGTCCTGTTAGCAAGGATCCCAACATGAT 2525
Query 2178 TCAGATGAAAGAGAAAACTGCTGCGGTACTTTCCCCATCCAGAGCTGCTCCTTGGAATCC 2237
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2526 TCAGATGAAAGAGAAAAGTGCTGCGGTACTTTCCCCATCCAGAGCTGCTCCTTGGAATCC 2585
Query 2238 TCCATCTCTAGTGCAAGCAAAACCGGAGAAAACGGTTGTTTCAAATGTAGATGCTGTTCC 2297
||| |||| ||||||||||||||||||||||| || ||||||||||||||| || |||||
Sbjct 2586 TCCGTCTCCAGTGCAAGCAAAACCGGAGAAAAAGGGTGTTTCAAATGTAGAGGCGGTTCC 2645
Query 2298 AAACAGGAAAGT-AGCATCTGCTAGATCACCTTCATCAGATCAAGCATCACCATCTCGTG 2356
|||||||||||| | ||||| || ||||||||||||| |||| ||||||||||||||||
Sbjct 2646 AAACAGGAAAGTCAT-ATCTGTTAAATCACCTTCATCACATCATGCATCACCATCTCGTG 2704
Query 2357 A-GACTAAGTTGCAAACTGTGGGTCTTAGAGCTGATATACAGAAAACCGTTTCTCCAAAA 2415
| | || |||||||||| ||||||| |||||||||||||||||||| || |||||| |||
Sbjct 2705 AAG-CTCAGTTGCAAACAGTGGGTCCTAGAGCTGATATACAGAAAATCGCTTCTCCGAAA 2763
Query 2416 CCGGTGGCACAACCAGCACCTTCTATCTCAAGGCCTTTGAGTGCTCCTATAATCCCCCCA 2475
|| |||| ||||||||||||| |||| ||||||||||||||||||||||||||||| |||
Sbjct 2764 CCTGTGGAACAACCAGCACCTCCTATGTCAAGGCCTTTGAGTGCTCCTATAATCCCTCCA 2823
Query 2476 AAGCAAGCTGCACCTGTAATATCTGCTGTTCAAACAACCTCGGCTGCGTCCCTTGCTCGT 2535
| ||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||
Sbjct 2824 ACGCAAGCTGCACCTGTAATATCTGCTGTTCAAAC--C-TCGACTGCGTCCCTTGCTCGT 2880
Query 2536 TCAATGAGCTCAACAGGCCGTTTAGGTTCACCGATACATAGCCAAGCTTACAATCCTCAA 2595
||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct 2881 TCAATGAGCTCAACAGGGCGTTTAGGTTCACCGACACATAGCCAAGCTTACAATCCTCAA 2940
Query 2596 TCCTATAAACATGCCATAGTGGGATCATCTGGTTTCACCCACTCAAGCACTCAATCAACG 2655
||||| ||||||||||||||||| |||||||||||||||||| ||||| ||||||| | |
Sbjct 2941 TCCTACAAACATGCCATAGTGGGTTCATCTGGTTTCACCCACCCAAGCTCTCAATCGA-G 2999
Query 2656 -GGAACAAGCACATTGCCGCCTTATTCACATCCGTCTCCTATCTCAGTATCAAGTCAGTC 2714
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 3000 TGGAACAAGCACATTGCCGCCTTATTCACATCCGTCTCCTATCTCAGTATCAAATCAGTC 3059
Query 2715 TGGTTTCCCTATCAATGTTGGCTCTTGGGATGTTTCTTCTGGTGGGCTCTTGTGGACCGG 2774
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 3060 TGGTTTCCCTATCAATGTTGGCTCTTGGGATGTTTCTTCTGGTGGGCTATTGTGGACCGG 3119
Query 2775 TGGTTCGAGTTCAAACAGAGATACAACAACAACCATCAGCGGGAATCATAAAACGAACAC 2834
|||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct 3120 TGGTTCGAGTTCAACCAGAGATACAACAACAACCATCAGCGGGAATCACAAAACAAACAC 3179
Query 2835 TTACAACACCCCCGTAGTAACTACCAGCATCAGGCCTACTAATGTCCAGATTGGGAGAAC 2894
||||||| | ||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 3180 TTACAACGCACCCGTAGTAACTACCAGCATCAGGCCTACTAATGTTCAGATAGGGAGAAC 3239
Query 2895 GGCGCAGA-T--GA---CCGATGAGTTCCCTCACCTTGATATCATCAATGATCTGCTTGA 2948
||| |||| | || ||||||||||||||||||||||||||||||||||||||||||
Sbjct 3240 GGCACAGAGTCTGATGACCGATGAGTTCCCTCACCTTGATATCATCAATGATCTGCTTGC 3299
Query 2949 AGACGAACACGGTTCAATGGACAGTAGTGTATACCATGTACCACAACAGTTCAACAACCA 3008
||||||||||||| ||||||| | ||| ||||||| ||||||||||||||||||||||||
Sbjct 3300 AGACGAACACGGTACAATGGATAATAGCGTATACCGTGTACCACAACAGTTCAACAACCA 3359
Query 3009 GTACTCATACCATGGTGGTGCTGATCTCGGGATCTCTGGCAGGTCTAGGAGTTACAGTGA 3068
||||||||| ||||| ||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct 3360 GTACTCATATCATGGCGGTGCGGATCTCGGGATCTCTAGCAGGTCTAGGAGTTACAGTGA 3419
Query 3069 TGATGGATTTCACCAGTCTTACGGTGAATACATGCCACATTCTGGTTCTTCTTCGCCATA 3128
|||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct 3420 TGATGGATTTCACCAGTCTTACGGTGAATACATGCCACATTCTGCTTCTTCCTCGCCATA 3479
Query 3129 TGGTAATGGACAAACACAATCGCAATGGCAGATGGCAA-T--GGACTTGTCTTTACGGGC 3185
||||||||| |||||||||||||||||||||||||||| | ||| || ||||||| |||
Sbjct 3480 TGGTAATGGGCAAACACAATCGCAATGGCAGATGGCAAATATGGATTTCTCTTTACCGGC 3539
Query 3186 TATGAGGAACCAAGACGATGCATCAGCATCAGC------TACTTACTCTTACTTTGATTT 3239
|||||||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct 3540 TATGAGGAACCAAGACGATGTATCAGCATCAGCAACAGCTACTTACTCTTACTTTGATTT 3599
Query 3240 AGATTCATCAAACCCGAACTTGTCTGGAATCAACGGCTATAGAGACTTCAGGCCATCGAA 3299
|||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct 3600 AGATTCATCAAACCCGAATTTGTCTGGAATCAACGGCTATAGGGACTTCAGGCCATCGAA 3659
Query 3300 CGGACACTGAATAGCTTTGGGTTTAAGGAGTGGCATTGCATTGTAATGTTTATTATATAA 3359
|||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 3660 CGGACACTGAG--G-TTTGGGTTTAAAGAGTGGCATTGCATTGTAATGTTTATTATATAA 3716
Query 3360 AGATGGAAAGCAAAAAACATTTGTGTAAAGAGAGTTTTCGTCCTCTTCGTTTCAAATGAA 3419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3717 AGATGGAAAGCAAAAAACATTTGTGTAAAGAGAGTTTTCGTCCTCTTCGTTTCAAATGAA 3776
Query 3420 TCttttttt 3428
|| ||||||
Sbjct 3777 TCCTTTTTT 3785
> AT1G04300.3 | Symbols: | TRAF-like superfamily protein | chr1:1148659-1154652
REVERSE LENGTH=3610
Length=3610
Score = 1219 bits (660), Expect = 0.0
Identities = 1190/1440 (83%), Gaps = 60/1440 (4%)
Strand=Plus/Plus
Query 164 ATGAAGATTGTGGAGCAGGAAGATCATCAGTGGATGAGAATTCAAATGGACAAAGA-AGT 222
||||||||| ||| | ||| |||| || | || |||| ||||||||||| || | |||
Sbjct 219 ATGAAGATTCTGGGGTTGGACGATC-TC--TAGAGGAGAGTTCAAATGGAC-AACACAGT 274
Query 223 CAATCAGAAGAAGTACTAGCGGAATGGCGGTCGTCTGATCAAGTGGAGAATGGAACTCCT 282
||| ||| ||||| ||| | || ||||| || |||| |||||||||||| || |||||
Sbjct 275 CAAGCAGGAGAAGCACTCTCAGAGTGGCGCTCTTCTGGTCAAGTGGAGAACGGGACTCCA 334
Query 283 TCAACATCGCCAC-CGTATTGGGACATCGATGATGATGACGACGATTTTGGATC-AAAAC 340
|| ||||| || | | || ||||| |||||||| ||| || |||| ||| | ||||
Sbjct 335 TCCACATC-CCCCTCTTACTGGGATATCGATGACGAT---GATGATTATGG-CCTGAAAC 389
Query 341 CATCTGAACTATTTGGGA-AAAATACTTGGACGATTGAGAAATTTTCAGAAATTAAC-AA 398
| ||||| ||| | ||| | ||||||||| |||| |||||||||||||| | || ||
Sbjct 390 CCTCTGAGTTATAT-GGACAGTATACTTGGAAGATTCCGAAATTTTCAGAAA-TCACTAA 447
Query 399 ACGGGAGC-TCCGTGGCGATGTTTTTGAAGTTGGGGGCTACAAATGGTATATATTAATTT 457
| |||||| | ||| || |||||||||||| ||| || |||||||||||||| |||||||
Sbjct 448 AAGGGAGCAT-CGTAGCAATGTTTTTGAAGCTGGCGGTTACAAATGGTATATTTTAATTT 506
Query 458 ATCCACAAGGGTGTGATGTTTGCAACCATCTCTCTTTGTTTCTCTGTGTTGCACACCATG 517
|||||||||| ||||||||||| || |||||||| |||||||||||||||||| | |||
Sbjct 507 ATCCACAAGGATGTGATGTTTGTAATCATCTCTCCTTGTTTCTCTGTGTTGCAAATTATG 566
Query 518 A-AAA--------A----C--TT-CT-TC-------CAGGCTGGAGTCATTTTGCTCAGT 553
| ||| | | || || || ||||||||||||| || |||||||
Sbjct 567 ATAAACTTCTTCCAGGTTCTTTTGCTATCTTGGAGGCAGGCTGGAGTCAGTTCGCTCAGT 626
Query 554 TTACTATAGCTGTGTCGAATAAAGATC-CAAAGAAATCAAAGCATTCAGATACGTTACAC 612
|||||||| |||||| || | |||||| | |||||||||||| ||||||||| | |||
Sbjct 627 TTACTATATCTGTGTTGAGTCAAGATCTC-AAGAAATCAAAGTTTTCAGATACACTGCAC 685
Query 613 CGGTTTTGGAAAAAAGAACATGATTGGGGATGGAAAAAGTTTATTGAGTCACCTAAATTA 672
||||||||||| ||||| |||||||||||||||||||||||||| |||| ||||| |||
Sbjct 686 CGGTTTTGGAAGAAAGAGCATGATTGGGGATGGAAAAAGTTTATGGAGTTGCCTAAGTTA 745
Query 673 AAGGAAGGGTTCATAGATGATTATGATTGTCTTACAATTAAGGCTCAAGTCCAGGTGATC 732
|| || |||||||||||||| | || |||||||||||| ||||| |||| |||||||||
Sbjct 746 AAAGACGGGTTCATAGATGAGTCTGGCTGTCTTACAATTGAGGCTAAAGTTCAGGTGATC 805
Query 733 AGAGAGAGGGTGGACCGACCTTTTCGCTGCCTTCATTATAAG-TATAGGGAG-GAACTTG 790
||||||||||| ||||||||||||||||||||| ||| | |||| |||| |||||||
Sbjct 806 AGAGAGAGGGTAGACCGACCTTTTCGCTGCCTTGATT-GCGGTTATA-GGAGAGAACTTG 863
Query 791 TTCGGGTGTATTTGAC-AAATGTAGAGCAAATTTGCTGGCGGTTTGTGGAAGAGAAAAGA 849
|| |||||||||| | |||||| |||||||||||| | || ||||| ||||||||||||
Sbjct 864 TTAGGGTGTATTT-CCAAAATGTGGAGCAAATTTGCCGACGTTTTGTTGAAGAGAAAAGA 922
Query 850 AGCAAGCTTGGTAGGTTGATAGAGGACAAGGCAAAATGGAAAAGCTTCTGTGCTTTCTGG 909
|||||||| || |||||||||||||||||||||| ||||| ||||||| ||| |||||||
Sbjct 923 AGCAAGCTAGGGAGGTTGATAGAGGACAAGGCAAGATGGACAAGCTTCGGTGTTTTCTGG 982
Query 910 ATGGGGTTGGACCAAAATTCAAGGCGTCGAATGTCCCGAGAGAAAATGGATGTGATTCTA 969
| ||| |||||||||| || |||||||| |||| |||||||| |||| || || |||
Sbjct 983 TTAGGGATGGACCAAAACTCTAGGCGTCGGATGTGTAGAGAGAAAGTGGACGTAATCCTA 1042
Query 970 AAAATAGTTGTAAAACAATTCTTCATTGAGAAGGAAGTTACATCTACTTTGGTGATGGAT 1029
||| |||||||||||| || ||| | ||||| |||||| |||| |||||||||||||||
Sbjct 1043 AAAGGAGTTGTAAAACACTTTTTCGTAGAGAAAGAAGTTTCATCCACTTTGGTGATGGAT 1102
Query 1030 TCCTTGTATAGTGGGTTGAAGGCTCTTGAAGGCCAAATTAAGAACAAGAAAACTAGGCCG 1089
|||||||||||||||||||||||||| |||||||||| |||||||| |||| ||||| ||
Sbjct 1103 TCCTTGTATAGTGGGTTGAAGGCTCTAGAAGGCCAAACTAAGAACATGAAAGCTAGGTCG 1162
Query 1090 AGACTAATGGATACTGAAG-AATTGCCAGCTCCAATTGTTAGTGTGGACAAAGATACGTT 1148
||||| | ||| | ||| |||||||||| || |||||||| ||||||||||||| |||
Sbjct 1163 AGACTTTTAGATGC-CAAGCAATTGCCAGCACCGATTGTTAGCGTGGACAAAGATATGTT 1221
Query 1149 TGCATTAGTTGATGATGTGTTATTACTCTTAGAGAGGGCTGCTGTGGAGCCATTGCCTAC 1208
| |||||||||||||||| | |||||| ||||||| |||||| | |||||||||||| |
Sbjct 1222 CGTATTAGTTGATGATGTGCTGTTACTCCTAGAGAGAGCTGCTCTTGAGCCATTGCCTCC 1281
Query 1209 AAAAGAGGAAAAAAGTCCCCAAAACCGCACGAAGGATGGGAATGCTGGAGAGGAATTC-A 1267
|||||| |||||| ||| ||| ||||| || |||||||| |||| |||||| || || |
Sbjct 1282 AAAAGATGAAAAAGGTCGCCAGAACCGTACAAAGGATGGCAATGATGGAGAAGAGGTCAA 1341
Query 1268 GTAGAGAAGCC-ATTGAGCGTGATGAGAGGCGTTTAACTGAGTTGGGTAGACGGACTGTG 1326
|| |||||| | ||||||||||||||| ||||||||||| ||||||||||| ||||||
Sbjct 1342 CAAG-GAAGCCGA-TGAGCGTGATGAGAGACGTTTAACTGAATTGGGTAGACGAACTGTG 1399
Query 1327 GAGATATTTGTTCTTGCACATATCTTCAGCAAC-AAAATTGAAGTTGCATACCAAGAAGC 1385
||||||||| ||||| | |||||||||||| || ||||| ||||||||| | ||||||||
Sbjct 1400 GAGATATTTATTCTTTCCCATATCTTCAGC-ACTAAAATCGAAGTTGCACATCAAGAAGC 1458
Query 1386 TATTGC-ATGGAAACGGCAAGAAGAACTTATTCGTGAAGAGGAGGAAGCGTGGCTGGCAG 1444
||| || | ||| |||| ||||||||||||||||| || |||||||||||| ||||||
Sbjct 1459 TATCGCGCT-AAAAAGGCAGGAAGAACTTATTCGTGAGGAAGAGGAAGCGTGGTTGGCAG 1517
Query 1445 AAAGCGAACAGAAGGCCaaaagaggaccatccgaaaaagagaagaaatctaagaagaaac 1504
||| |||||||| ||||||||||||| || |||| |||||||||||||||||||||||
Sbjct 1518 AAACCGAACAGAGGGCCAAAAGAGGAGCAGCCGAGCGAGAGAAGAAATCTAAGAAGAAAC 1577
Query 1505 aggcgaaacagaaaaagaacaaaaacaaaggaaaggaaaaaaagaaagaagagaaggtga 1564
|||||||||||||| ||||||||| ||||| ||||| |||| ||| ||||| |||||||
Sbjct 1578 AGGCGAAACAGAAACGGAACAAAAATAAAGGGAAGGACAAAAGGAAGGAAGAAAAGGTGA 1637
> AT5G52330.1 | Symbols: | TRAF-like superfamily protein | chr5:21247596-21250425
REVERSE LENGTH=1282
Length=1282
Score = 771 bits (417), Expect = 0.0
Identities = 908/1135 (80%), Gaps = 74/1135 (7%)
Strand=Plus/Plus
Query 337 AAACCATCTGAACTATTTGGGAAAAATACTTGGACGATTGAGAAATTTTCAGAAATTAAC 396
||||| ||||| ||| ||| |||||||| |||| |||| ||||||||||| |||| | |
Sbjct 125 AAACCCTCTGAGTTATATGGAAAAAATACATGGAAGATTAAGAAATTTTCACAAATCAGC 184
Query 397 AAACGGGAGCTCCG-TGGCGA-TGTTTTTGAAGTTGGGGGCTACAAATGGTATATATTAA 454
||| ||||| | || | || | |||||||||| |||| ||||||| ||| |||| ||||
Sbjct 185 AAAAGGGAG-TTCGCTAGC-AGTGTTTTTGAAATTGGAGGCTACAGTTGGCATATTTTAA 242
Query 455 TTTATCCACAAGGGTGTGATGTTTGCAACCATCTCTCTTTGTTTCTCTGTGTTGCACACC 514
| |||||| |||| ||||||||| |||| |||||||| || ||||||||||||||| |||
Sbjct 243 TGTATCCAGAAGGATGTGATGTTAGCAATCATCTCTCATTATTTCTCTGTGTTGCAAACC 302
Query 515 ATGAAAAACTTCTTCCAGGCTGGAGTCATTTTGCTCAGTTTACTATAGCTGTG-TCGAAT 573
|||| |||||||||||||||||||||| || ||||||||||||||| ||||| | | ||
Sbjct 303 ATGATGAACTTCTTCCAGGCTGGAGTCAGTTGGCTCAGTTTACTATATCTGTGAT-GCAT 361
Query 574 AAAGATCCAAAGAAATCAAAGCATTCAGATACGTTACACCGGTTTTGGAAAAAAGAACAT 633
|||||||||||||| || ||| |||||||||| | |||||||||||||| |||||||||
Sbjct 362 AAAGATCCAAAGAAGTCTAAGTTTTCAGATACGCTGCACCGGTTTTGGAAGAAAGAACAT 421
Query 634 GATTGGGGATGGAAAAAGTTTATTGAGTCACCTAAATTAAAGGAAGGGTTCATAGATGAT 693
||||||||||||||||||||||| |||| ||| || ||| ||| || ||||||||||||
Sbjct 422 GATTGGGGATGGAAAAAGTTTATGGAGTTACCGAAGTTACGGGATGGCTTCATAGATGAT 481
Query 694 TATGATTGTCTTACAATT-AAGGCTCAAGTCCAGGTGATCAGAGAGAGGGTGGACCGACC 752
| || |||||||||||| || || |||| |||||||||||||| ||||||||||||||
Sbjct 482 TCTGGCTGTCTTACAATTGAAA-CTAAAGTTCAGGTGATCAGAGACAGGGTGGACCGACC 540
Query 753 TTTTCGCTGCCTTCATTATAAGT-ATAGGG-AGGAACTTGTTCGGGTGTATTTGAC-AAA 809
||| | | |||| ||||| || | | | || || ||||| |||||||||| | |||
Sbjct 541 TTT-CT-T-CCTTGATTATG-GTTACAAGACAGAAA-TTGTTAGGGTGTATTTT-CGAAA 594
Query 810 TGTAGAGCAAATTTGC-TGGCGGTTTGTGGAAGAGAAAAGAAGCAAGCTTG-GTAGGTTG 867
| |||||||||||| | | || |||||||| |||| |||||||||||||| | || |||
Sbjct 595 TATAGAGCAAATTTTCCTA-CGCTTTGTGGAGGAGAGAAGAAGCAAGCTTGAGAAG-TTG 652
Query 868 ATAGAGGACAAGGCAAAATGGAAAAGCTTCTGTGCTTTCTGGATGGGGTTGGACCAAAAT 927
|||||||||||||| ||||||| ||||||| ||| ||||||| | || ||||| ||||
Sbjct 653 ATAGAGGACAAGGCCAAATGGACAAGCTTCGGTGTTTTCTGGTTAGGAATGGACAAAAAC 712
Query 928 TCAAGGCGTCGA-ATGTCCCGAGAGAAAATGGATGTGATTCTAAAAATAGTTGTAAAACA 986
|| |||||| || ||||| ||||||||||||| || || |||||| | ||||||||||
Sbjct 713 TCTAGGCGT-GAGATGTCTAGAGAGAAAATGGACGTAATCCTAAAAGGATTTGTAAAACA 771
Query 987 ATTCTTCATTGAGAAGGAAGTTACATCTACTT-TGGTGATGGATTCCTTGTATAGTGGGT 1045
|| ||||| || || | |||||||| || | | | |||||||| |||||||| |||||
Sbjct 772 CTTTTTCATGGAAAATGTTGTTACATC-ACCTATAGCGATGGATTGCTTGTATAATGGGT 830
Query 1046 TGAAGGCTCTTGAAGGCCAAATTAAGAACAAGAAAACTAGGCCGAGACTAATGGAT-ACT 1104
|||||| |||||||| ||||| ||||||||||||| |||| || | ||| | ||| ||
Sbjct 831 TGAAGGATCTTGAAGTCCAAACTAAGAACAAGAAAGCTAGCCCAAAACTGTTAGATGAC- 889
Query 1105 GAAG-AATTGCCAGCTCCAATTGTTAGTGTGGACAAAGATACGTTTGCATTAGTTGATGA 1163
||| ||||||||||||| |||||| ||||||| ||||| ||| | ||||||||||||
Sbjct 890 -AAGGAATTGCCAGCTCCGTTTGTTAAAGTGGACAGAGATATGTTCGTATTAGTTGATGA 948
Query 1164 TG-TGT-TA-TTACTCTTAGAGAGGGCTGC--T----G-------TG-----GAGCCATT 1202
|| ||| | |||||| ||||||||||||| | | || ||||||||
Sbjct 949 TGATGTGTTGTTACTCCTAGAGAGGGCTGCACTCCTAGAGAGGGCTGCTCCAGAGCCATT 1008
Query 1203 GCCTACAAAAGAGGAAAAAAG-TCCCCAAAACCGCACGAAGGATGGG-AATGCTGGAGAG 1260
|||| | ||||| || ||| | || |||||||| | ||||| || || | || |||
Sbjct 1009 GCCTCCGAAAGATGATAAA-GCTCTTCAAAACCGTATTAAGGA-GGACAAGGATGAAGAA 1066
Query 1261 GA-ATTCAGTAGAG-AAGCCATTGAGCGTGATGAGAGGCGTTTAACTGAGTTGGGTAGAC 1318
|| || || | || |||| || | ||| || | | ||||| ||||| ||||||||
Sbjct 1067 GATAT-CAACA-AGGAAGC--TT-A---TGA-GATATG--TTTAAATGAGTGGGGTAGAC 1115
Query 1319 GGACTGTGGAGATATTTGTTCTTGCAC-ATATCTTCAGCAACAAAATTGAAGTTGCATAC 1377
| |||||||||||||||||||||| || ||||||| ||||| || |||| |||||||||
Sbjct 1116 GAACTGTGGAGATATTTGTTCTTG-ACCATATCTTTAGCAA-AA--TTGAGGTTGCATAC 1171
Query 1378 CAAGAAGCTATTGCA-TGGAAACGGCAAGAAGAACTTATTCGTGAAGAGGAGGAA 1431
||||||||||||| | ||| |||| ||||||||||| |||||||| ||||||
Sbjct 1172 AAAGAAGCTATTGCGCTTAAAA-GGCAGGAAGAACTTATCCGTGAAGAAGAGGAA 1225
> AT4G16045.1 | Symbols: | TRAF-like superfamily protein | chr4:9089906-9091860
FORWARD LENGTH=1149
Length=1149
Score = 296 bits (160), Expect = 9e-79
Identities = 228/260 (88%), Gaps = 7/260 (3%)
Strand=Plus/Plus
Query 466 GGGTGTGATGTTTGCAACCATCTCTCTTTGTTTCTCTGTGTTGCACACCATGAAAAACTT 525
|||| |||||||| |||| ||||||||||||||||||||||||| || | |||||||||
Sbjct 68 GGGT-TGATGTTTCCAACTGTCTCTCTTTGTTTCTCTGTGTTGCAAACTACGAAAAACTT 126
Query 526 CTTCCAGGCTGGAGTCATTTTGCTCAGTTTACTATAGCTG-TGTCGAATAAAGATCCAAA 584
|||||||| ||||||||||| ||||||||| || |||||| || |||||||||||| ||
Sbjct 127 CTTCCAGGTTGGAGTCATTTAGCTCAGTTTTCTGTAGCTGTTG-AGAATAAAGATCCGAA 185
Query 585 GAAATCAAAGCATT-CAGATACGTTACACCGGTTTTGGAAAAAAGAACATGATTGGGGAT 643
|||||||||| ||| ||||||||||||||| ||||||||| ||||| |||||||||||||
Sbjct 186 GAAATCAAAG-ATTGCAGATACGTTACACCAGTTTTGGAAGAAAGAGCATGATTGGGGAT 244
Query 644 GGAAAAAGTTTATTGAGTCACCTAAATTAAAGGAAGGGTTCATAGATGA-TTATGATTGT 702
|||||||||||||||||| |||||||||| |||| || ||||||||| | || ||| | |
Sbjct 245 GGAAAAAGTTTATTGAGTTACCTAAATTACAGGATGGATTCATAGATAAGTT-TGACTCT 303
Query 703 CTTACAATTAAGGCTCAAGT 722
||| || |||| ||||||||
Sbjct 304 CTTTCACTTAAAGCTCAAGT 323
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 170617773143
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5