BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg494659
Length=2103
Score E
Sequences producing significant alignments: (Bits) Value
AT5G43390.1 | Symbols: | Uncharacterised conserved protein UCP... 2715 0.0
AT5G43400.1 | Symbols: | Uncharacterised conserved protein UCP... 2320 0.0
> AT5G43390.1 | Symbols: | Uncharacterised conserved protein UCP015417,
vWA | chr5:17422799-17424964 REVERSE LENGTH=2166
Length=2166
Score = 2715 bits (1470), Expect = 0.0
Identities = 1921/2131 (90%), Gaps = 61/2131 (3%)
Strand=Plus/Plus
Query 1 ACCATCACCAAATCTCTATCTCTTCAATGG---CTTCTTCCACTACGATCCTTCTGGGAC 57
||||||||||||||||| ||| |||||||| ||||||||||| |||||||||| ||||
Sbjct 69 ACCATCACCAAATCTCTCTCT-TTCAATGGCTTCTTCTTCCACTGCGATCCTTCTCGGAC 127
Query 58 CACCTTCCGTCGCCGCCTTCGAGACACCAGAAACCCCTGTTTCCGATGGCAACAGTTTGA 117
||||||||||||||||| | |||||||| | |||||||||| ||||||| | |
Sbjct 128 CACCTTCCGTCGCCGCCATGGAGACACC----A-----GTTTCCGATGACAACAGTGTAA 178
Query 118 TCTCCCAAACTGCCACACTAAACCTCGAAGAACCACCGATGGGTCTGACGGAAAACTTTT 177
||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||| |
Sbjct 179 TCTCCCAAATTGCCACACTAAACCTAGAAGAACCACAGATGGGTCTGACGGAAAACTTCT 238
Query 178 CGCCCACGTTTCTATCCTCCGGGAACCCATGTCTCGATTTCTTCTTCCACATCGTCCCGG 237
|||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 239 CGCCCACGTTTCTAACCTCCGGGAACCCATGTCTCGATTTCTTCTTCCATATCGTCCCAG 298
Query 238 ACACACCTTCCGAGGATCTGATCCAAAGGCTGGCGATTTCTTGGTCTCACGATCCTTTGA 297
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 299 ACACACCTTCCGATGATCTGATCCAAAGGCTGGCCATTTCTTGGTCTCACGATCCTTTGA 358
Query 298 CTACGTTAAAGCTCATCTGCAATCTCAGAGGAGTTAGAGGAACTGGGAAATCAGACAAGG 357
||||||| |||||| |||||||||||||||| |||||||||||||| |||||||||||||
Sbjct 359 CTACGTTGAAGCTCCTCTGCAATCTCAGAGGTGTTAGAGGAACTGGAAAATCAGACAAGG 418
Query 358 AAGGGTTTTACACAGCTGCCTTGTGGCTTTACAAGAATCACCCAAAAACCCTAGCTTTGA 417
||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct 419 AAGGGTTTTACACAGCTGCCTTGTGGCTTTACAAGAACCACCCAAAAACTCTAGCTTTGA 478
Query 418 ATATCCCTGCTCTCGTCGATTTTGGGTATTTCAAAGATTTGCCTGAGATTCT-CTTTCGG 476
|||||||| |||| |||||||||||||||||||||||||| ||||||||||| ||| |||
Sbjct 479 ATATCCCTACTCTTGTCGATTTTGGGTATTTCAAAGATTTACCTGAGATTCTGCTT-CGG 537
Query 477 ATCTTGGAAGGTCAGCAGATGGAGAGAGGGAAGAAGCGTGTTTGGAGGAAGAGGATTCAG 536
||||||||||||||||||| ||||||||| |||| || |||||||||||||||||||||
Sbjct 538 ATCTTGGAAGGTCAGCAGACGGAGAGAGGTAAGACTCGGGTTTGGAGGAAGAGGATTCAG 597
Query 537 AGGAAATTCAAAGGGGATAGTGAGAAAAGGACTGCTATATCTGGTGAAATGGAAGATCGA 596
||||| |||||||||||||||||||||| | || | ||||| ||||| |||||||||||
Sbjct 598 AGGAAGTTCAAAGGGGATAGTGAGAAAAAGTCTACCATATCCGGTGACATGGAAGATCGG 657
Query 597 ATTCTCGAAACAGCGGAGGAGATTGGTGGCCCTGTTGATAAAATCAAAGCTAGGGCTTTG 656
||||||||||| |||||||||| |||||| ||||||| |||| |||| |||||||||||
Sbjct 658 ATTCTCGAAACCGCGGAGGAGACTGGTGGTCCTGTTGGTAAAGTCAAGGCTAGGGCTTTA 717
Query 657 CGGAAACAGAGAGAGTTCGAAAAGGCGAAAAAGGCGCTAGAGAGGTATAACTCTGATGCT 716
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct 718 CGGAAACAGAGAGAGTTCGAAAAGGCGAAAAAGGCTCTAGATAGGTATAACTCTGATGCT 777
Query 717 AATTACAGATTACTGTTTGAT-AGAATTGCGGATTTGTTTGCCGATTTGTTGAAATCGGA 775
|||||||||||||| |||||| | |||||| ||||||||||| || || |||||||| ||
Sbjct 778 AATTACAGATTACTCTTTGATCA-AATTGCCGATTTGTTTGCGGAATTATTGAAATCAGA 836
Query 776 TTTGAAGTGTTTGAATTC-GAATGAGTTGAATAAGATTGGTTTAGCTTCGAAATGGTGTC 834
|||| ||| ||||||| | || | | ||||| |||||| |||||||||||||||||||||
Sbjct 837 TTTGGAGTATTTGAATACAGA-TAATTTGAACAAGATTAGTTTAGCTTCGAAATGGTGTC 895
Query 835 CTTCTGTCGATTCTTCGTATGATAAGACTACTTTGATATGTGAGGCGATTGCTAGAAGGA 894
||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct 896 CTTCTGTTGATTCTTCGTATGATAAGACTACTTTGATATGTGAGGCTATTGCTAGAAGAA 955
Query 895 TGTTTCCT-AGAGATGAGTATGAAG--G-TATCGAAGAAGCGCATTATGCGTATAGGATT 950
|||| ||| ||||| || || |||| | ||||||||||| ||||||||| |||||||||
Sbjct 956 TGTT-CCTTAGAGAGGAATACGAAGAAGGTATCGAAGAAGTGCATTATGCATATAGGATT 1014
Query 951 AGAGATAGGTTGAGGAAAGAAGTTCTCGTGCCGTTACATAAAGCGCTCGAATTACCAGAG 1010
|||||||||||||| ||||||||||| || |||||||||||||| || || || ||||||
Sbjct 1015 AGAGATAGGTTGAGAAAAGAAGTTCTTGTCCCGTTACATAAAGCTCTTGAGTTGCCAGAG 1074
Query 1011 GTGTCTATGAGTGCCAAGGAATGGAATTTGTTGAAGTACAATAGAGTTCCTTCTGTGGCT 1070
||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||
Sbjct 1075 GTGTCTATGAGTGCCAAGGAATGGAATCTGTTGAAGTACAATAGAGTTCCTTCTATAGCC 1134
Query 1071 ATGCAGAATTACAGGACACGCTTTGTGGAACACGATAACGAGAGGTTCACCGAGTTTTTG 1130
||||||||||| || ||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct 1135 ATGCAGAATTATAGTTCACGCTTTGCGGAACACGATAGCGAGAGGTTCACCGAGTTTTTG 1194
Query 1131 GGGGATGTGAGATCTGGGAAGAAGAAAATCGCGGCTGGTGCATTGCTTCCTCATCAGATA 1190
| |||||||| ||| ||||||||||| || ||||||||||| |||||||||||||||||
Sbjct 1195 GAGGATGTGAAATCCGGGAAGAAGAAGATGGCGGCTGGTGCGTTGCTTCCTCATCAGATT 1254
Query 1191 ATCAG-CGAGCTTGAGAATGATAGTGAAAATGAAGTTGGTGCAGAAGTAGCAGAGCTTCA 1249
||||| | ||||| ||||||||||||| | || | ||||||||||||||||||
Sbjct 1255 ATCAGTC-AGCTTTTGAATGATAGTGAA---G--GT-GA---AGAAGTAGCAGAGCTTCA 1304
Query 1250 ATGGGCAAGAATGGTGGATGATCTTGCCAAGAAAGGGAAATTGACGAATTCATTGGCGAT 1309
|||||| |||||||| ||||||||||||||||||||||| |||| ||| |||||||||||
Sbjct 1305 ATGGGCGAGAATGGTTGATGATCTTGCCAAGAAAGGGAAGTTGAAGAACTCATTGGCGAT 1364
Query 1310 TTGTGATGTCTCGGGAAGCATGGCTGGTACACCTATGAATGTTTGTGTAGCACTCGGGTT 1369
|||||||||||||||||||||||||||||||||||||||||||||| | || | |||||
Sbjct 1365 TTGTGATGTCTCGGGAAGCATGGCTGGTACACCTATGAATGTTTGTATTGCGTTAGGGTT 1424
Query 1370 ATTGGTTTCAGAACTTAACGAAGAGCCGTGGAAAGGGAAAGTTATCACCTTTAGCGAAAA 1429
||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct 1425 ATTGGTTTCGGAACTTAATGAAGAGCCGTGGAAAGGGAAAGTTATCACTTTTAGCGAAAA 1484
Query 1430 CCCGCAGCTTCATGTAGTCACGGGTTCGAGTCTGAGAGAAAAGACTCAGTTTGTCAGAGC 1489
||||||||||||||| ||||||||||||||||||||||| |||||| ||||||| ||||
Sbjct 1485 CCCGCAGCTTCATGTTGTCACGGGTTCGAGTCTGAGAGAGAAGACTAAGTTTGTTAGAGA 1544
Query 1490 AATGGATTGGGGAATGAACACAGATTTTCAGAAGGTGTTTGATCGGATTCTAGAGGTTGC 1549
|||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1545 AATGGATTTTGGAATCAACACAGATTTCCAGAAGGTGTTTGATCGGATTCTAGAGGTTGC 1604
Query 1550 AGTCGAGAATAACTTAACCAATGACCAGATGATCAAGCGGTTGTTTGTGTTCAGCGACAT 1609
|||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||
Sbjct 1605 TGTCGAGAATAACTTAACCGATGAACAGATGATCAAGCGGTTGTTTGTGTTCAGTGACAT 1664
Query 1610 GGAGTTTGATGATGCAAGAGTAAAAGACAGCCATTCGGAAGTGAGTGACTACGAGAGTAA 1669
|||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||
Sbjct 1665 GGAGTTTGATGATGCAAGAGTA---GACAGCCATTCGGAAATGAGTGACTACGCGAGTAA 1721
Query 1670 CTCCGAGAGTGACTATGAGAGTGTCTCCG-AGAGTTTTGAGAAATGGGAGACGGACTATG 1728
|| ||||||||||| ||||||||| ||| ||||||||||||||||||||||||| ||||
Sbjct 1722 CTTGGAGAGTGACTACGAGAGTGTC-CCGGAGAGTTTTGAGAAATGGGAGACGGATTATG 1780
Query 1729 AAGTTGTTCAGAGAAAGTATAAAGAGAAGGGTTTTCAGAATGTTCCTGAAATTGTATTTT 1788
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1781 AAGTTGTTCAGAGGAAGTATAAAGAGAAGGGTTTTCAGAATGTTCCTGAAATTGTATTTT 1840
Query 1789 GGAACTTAAGAGACTCGTCAGCTACACCCGTGGCGTCTAAGCAGAAAGGAGTAGCTATGG 1848
||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct 1841 GGAACTTAAGAGACTCGTCAGCTACACCCGTGGTGTCTAAGCAGAAAGGTGTAGCTATGG 1900
Query 1849 TTAGCGGGTTTTCGAAGAATCTACTGACTCTGTTTCTTGAGGAAGGTGGGATTGTGAATC 1908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1901 TTAGCGGGTTTTCGAAGAATCTACTGACTCTGTTTCTTGAGGAAGGTGGGATTGTGAATC 1960
Query 1909 CTGAAGATGTCATGTGGTTAGCCATTAAAGGTGATGAGTATAAGAAGCTAGCTGTTTATG 1968
||||||||||||||| |||||||||||||||||| |||||| ||||||| ||||||||||
Sbjct 1961 CTGAAGATGTCATGTTGTTAGCCATTAAAGGTGAGGAGTATCAGAAGCTTGCTGTTTATG 2020
Query 1969 ACTGAGATCCTTAAG-CAGttttt-t-ttC-ATTTTGATGTGAGGACATGAATGAATCTT 2024
||||||| || | || ||| | || |||||| || || |||||||||||||||
Sbjct 2021 ACTGAGAAGTTTTATTCA-TTTAAATATTGGATTTTG-TG--AGTACATGAATGAATCTT 2076
Query 2025 GTTTATGAtttttttt-------A--TAC-TAAGTCTAATTAGATATAGCTAAGAAAATG 2074
||||| | |||||||| | ||| || ||||||| ||||| |||||||||||||
Sbjct 2077 GTTTAAGTTTTTTTTTTTTTTCTAAGTACCTATGTCTAATAAGATACAGCTAAGAAAATG 2136
Query 2075 AAAATGATCTA--GAAGTCATAAGAGGAGGC 2103
||| ||||||| |||||||||||| |||||
Sbjct 2137 AAA-TGATCTATAGAAGTCATAAGATGAGGC 2166
> AT5G43400.1 | Symbols: | Uncharacterised conserved protein UCP015417,
vWA | chr5:17425944-17428223 REVERSE LENGTH=2280
Length=2280
Score = 2320 bits (1256), Expect = 0.0
Identities = 1707/1920 (89%), Gaps = 50/1920 (3%)
Strand=Plus/Plus
Query 82 CACCAGAAACCCCTGTTTCCGATGGCAACAGTTTGATCTCCCAAACTGCCACACTAAACC 141
|||| ||||||| | ||||||||| |||| | | ||||||||||| || ||||||||||
Sbjct 151 CACCGGAAACCCATATTTCCGATGAAAACACTCTAATCTCCCAAACCGCTACACTAAACC 210
Query 142 TCGAAG-A--ACCACCGATGGGTCTGACGGAAAACTTT-TCGCCCACGTTTCTATCCTCC 197
|||||| | |||||| |||||||| ||||| || ||| ||||| || ||||| ||||||
Sbjct 211 TCGAAGAACCACCACCAATGGGTCTAACGGAGAA-TTTCTCGCCGACATTTCTCTCCTCC 269
Query 198 GGGAACCCATGTCTCGATTTCTTCTTCCACATCGTCCCGGACACACCTTCCGAGGATCTG 257
|||||||||||||||||||||||||||||||||||||| |||||| || |||| ||||||
Sbjct 270 GGGAACCCATGTCTCGATTTCTTCTTCCACATCGTCCCCGACACATCTCCCGATGATCTG 329
Query 258 ATCCAAAGGCTGGCGATTTCTTGGTCTCACGATCCTTTGACTACGTTAAAGCTCATCTGC 317
||||||||||| || |||||||||||||||||||| ||||||||||| ||||| ||||||
Sbjct 330 ATCCAAAGGCTAGCAATTTCTTGGTCTCACGATCCGTTGACTACGTTGAAGCTTATCTGC 389
Query 318 AATCTCAGAGGAGTTAGAGGAACTGGGAAATCAGACAAGGAAGGGTTTTACACAGCTGCC 377
||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 390 AATCTCAGAGGTGTTAGAGGAACTGGGAAATCAGACAAAGAAGGGTTTTACACAGCTGCT 449
Query 378 TTGTGGCTTTACAAGAATCACCCAAAAACCCTAGCTTTGAATATCCCTGCTCTCGTCGAT 437
|| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||
Sbjct 450 TTTTGGCTTTACAAGAATCATCCAAAAACCCTAGCTTTGAATGTCCCTGCTCTCGTTGAT 509
Query 438 TTTGGGTATTTCAAAGATTTGCCTGAGATTCTCTTTCGGATCTTGGAAGGTCAGCAGATG 497
|||||||||||||||||| ||||||||||||| ||||||||||||||||||||| | |||
Sbjct 510 TTTGGGTATTTCAAAGATCTGCCTGAGATTCTGTTTCGGATCTTGGAAGGTCAGAATATG 569
Query 498 GAGAGAGGGAAGAAGCGTGTTTGGAGGAAGAGGATTCAGAGGAAATTCAAAGGGGATAGT 557
|||||||||||||| || ||||||||||||||| |||| ||||||||||||||| | ||
Sbjct 570 GAGAGAGGGAAGAATCGGGTTTGGAGGAAGAGGGTTCAAAGGAAATTCAAAGGGAAGAGA 629
Query 558 GAGAAAAGGACTGCTATATCTGGTGAAATGGAAGATCGAATTCTCGAAACA-GCGGAGGA 616
||||||| | ||| || || ||||||||||||||||| ||||| |||| | ||||||||
Sbjct 630 GAGAAAAAGTCTGAGATTTCCGGTGAAATGGAAGATCGGATTCTGGAAA-ATGCGGAGGA 688
Query 617 GATTGGTGGCCCTGTTGATAAAATCAAA-GCTAGGGCTTTGCGGAAACAGAGAGAGTTCG 675
||||||||| |||||||||| | ||| ||||| ||||| ||||||||||||||||||
Sbjct 689 GATTGGTGGTTCTGTTGATAAGGT-AAAGGCTAGAGCTTTAAGGAAACAGAGAGAGTTCG 747
Query 676 AAAAGGCGAAAAAGGCGCTAGA-GAGGTATAACTCTGATGCTAATTACAGATTACTGTTT 734
||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||
Sbjct 748 AAAAGGCGAAAAAGGCGGTA-ACGAGGTATAACTCTGATGCTAATTACAGATTACTGTTT 806
Query 735 GATAGAATTGCGGATTTGTTTGCCGATTTGTTGAAATCGGATTTGAAGTGTTTGAATTCG 794
||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||
Sbjct 807 GATAGAATTGCGGATTTGTTTGCGGTTTTGTTGAAATCGGATTTGAAGTATTTGAATTCG 866
Query 795 AATGAGTTGAATAAGATTGGTTTAGCTTCGAAATGGTGTCCTTCTGTCGATTCTTCGTAT 854
|||| ||||| ||||||| ||||||||||||||||||||||||| || ||||||||||||
Sbjct 867 AATGGGTTGACTAAGATTAGTTTAGCTTCGAAATGGTGTCCTTCGGTTGATTCTTCGTAT 926
Query 855 GATAAGACTACTTTGATATGTGAGGCGATTGCTAGAAGGATGTTTCCTAGAGATGAGTAT 914
|||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct 927 GATAAGGCTACTTTGATATGTGAGGCAATTGCTAGAAGGATGTTTCCTAGAGAGGAGTAT 986
Query 915 GAAGGTATCGAAGAAGCGCATTATGCGTATAGGATTAGAGATAGGTTGAGGAAAGAAGTT 974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 987 GAAGGTATCGAAGAAGCGCATTATGCGTATAGGATTAGAGATAGGTTGAGGAAAGAAGTT 1046
Query 975 CTCGTGCCGTTACATAAAGCGCTCGAATTACCAGAGGTGT-CTATGAGTGCCAAGGAATG 1033
|| |||||||| ||||||||||| || || || ||| ||| | |||||||| ||||||||
Sbjct 1047 CTTGTGCCGTTGCATAAAGCGCTTGAGTTTCCGGAGTTGTTC-ATGAGTGCTAAGGAATG 1105
Query 1034 GAATTTGTTGAAGTACAATAGAGTTCCTTCTGTGGCTATGCAGAATTACAGGACACGCT- 1092
||||||||||||||| ||||||||||||||||| |||||| ||||||||| || | |||
Sbjct 1106 GAATTTGTTGAAGTATAATAGAGTTCCTTCTGTTGCTATGAAGAATTACAAGA-A-GCTG 1163
Query 1093 TT-GTGGAACACGATAACGAGAGGTTCACCGAGTTTTTGGGGGATGTGA-GATCTGGGAA 1150
|| | |||||| |||| ||||||||| ||||||||||||| |||||||| | || || ||
Sbjct 1164 TTTGAGGAACATGATAGCGAGAGGTTTACCGAGTTTTTGGAGGATGTGAAG-TCCGGAAA 1222
Query 1151 GAAGAAAATCGCGGCTGGTGCATTGCTTCCTCATCAGATAATCAGCGAGCTTGAGAATGA 1210
|||||| || ||||||||||| |||||||||||||||||||||| | |||| ||| ||||
Sbjct 1223 GAAGAAGATTGCGGCTGGTGCGTTGCTTCCTCATCAGATAATCAACCAGCTGGAGGATGA 1282
Query 1211 TAGTGAAAATGAAGTTGGTGCAGAAGTAGCAGAGCTTCAATGGGCAAGAATGGTGGATGA 1270
||||| | |||||||||||| ||||| ||||| ||||||||||| |||||||| |||||
Sbjct 1283 TAGTGGGAGTGAAGTTGGTGCGGAAGTTGCAGAACTTCAATGGGCGAGAATGGTTGATGA 1342
Query 1271 TCTTGCCAAGAAAGGGAAA-TTGACGAATTCATTGGCGATTTGTGATGTCTCGGGAAGCA 1329
|||||| ||||||||||| || | ||||||| ||||| ||||||||||||| ||||| |
Sbjct 1343 TCTTGCTAAGAAAGGGAAGCTTAA-GAATTCACTGGCGGTTTGTGATGTCTCTGGAAGTA 1401
Query 1330 TGGCTGGTACACCTATGAATGTTTGTGTAGCACTCGGGTTATTGGTTTCAGAACTTAACG 1389
|| |||||||||||||| | ||||||||||| ||||||||| ||||||| || |||| |
Sbjct 1402 TGTCTGGTACACCTATGGAGGTTTGTGTAGCGCTCGGGTTACTGGTTTCGGAGCTTAGTG 1461
Query 1390 AAGAGCCGTGGAAAGGGAAAGTTATCACCTTTAGCGAAAACCCGCAGCTTCATGTAGTCA 1449
|||||||||||||||||||||||||||||||||||||||||||| |||| ||| | ||||
Sbjct 1462 AAGAGCCGTGGAAAGGGAAAGTTATCACCTTTAGCGAAAACCCGGAGCTGCATATTGTCA 1521
Query 1450 CGGGTTCGAGTCTGAGAGAAAAGACTCAGTTTGTCAGAGCAATGGATTGGGGAATGAACA 1509
|||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||
Sbjct 1522 CGGGTTCGAGTCTGAGAGAAAAGACTCAGTTTGTTAGAGAAATGGAATGGGGAATGAACA 1581
Query 1510 CAGATTTTCAGA-AGGTGTTTGATCGGATTCTAGAGGTTGCAGTCGAGAATAACTTAACC 1568
| |||||||||| || |||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 1582 CGGATTTTCAGATAG-TGTTTGATCGTATTCTAGAAGTTGCAGTCGAGAATAACTTAACC 1640
Query 1569 AATGACCAGATGATCAAGCGGTTGTTTGTGTTCAGCGACATGGAGTTTGATGATGCAA-G 1627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1641 GATGACCAGATGATCAAGCGGTTGTTTGTGTTCAGCGACATGGAGTTTGATGATGCAATG 1700
Query 1628 AGTAAAAGACAGCCATTCGGAAGTGAGTGACTA-C-GAGAGTA-ACT-CCGA--GAGTGA 1681
| ||| |||||||||||| |||||| || | | ||| || | |||| || ||
Sbjct 1701 -GCAAA---CAGCCATTCGGAGGTGAGTTACCATCTGAGTGTGGAGGACCGATTGAA-GA 1755
Query 1682 CTAT-GA-G-AGTGTCTCCGAGAGTTTTGAGAAATGGGAGACGGACTATGAAGTTGTTCA 1738
||| || | | | ||| | || |||||||||||||| || ||||| || |||||
Sbjct 1756 -TATCGAAGGAACGG-TCC-A-AG----GAGAAATGGGAGACAGATTATGAGGTGGTTCA 1807
Query 1739 GAGAAAGTATAAAGAGAAGGGTTTTCAGAATGTTCCTGAAATTGTATTTTGGAACTTAAG 1798
||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 1808 GAGGAAGTATAAAGAGAAGGGTTTTCAGAATGTTCCAGAAATGGTATTTTGGAACTTAAG 1867
Query 1799 AGACTCGTCAGCTACACCCGTGGC-GTCTAAGCAGAAAGGAGTAGCTATGGTTAGCGGGT 1857
|||||| || ||||| || |||| | |||| ||||||||||||||||||||||||||||
Sbjct 1868 AGACTCATCGGCTACTCCGGTGGTTG-CTAACCAGAAAGGAGTAGCTATGGTTAGCGGGT 1926
Query 1858 TTTCGAAGAATCTACTGACTCTGTTTCTTGAGGAAGGTGGGATTGTGAATCCTGAAGATG 1917
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct 1927 TTTCGAAGAATCTACTGACTCTGTTTCTTGAAGAAGGTGGGATCGTGAATCCTGAAGATG 1986
Query 1918 TCATGTGG-TTAGCCATTAAAGGTGATGAGTATAAGAAGCTAGCTGTTTATGACTGAGAT 1976
|||||||| || ||||| |||||||| |||||||||||||| | ||||| ||||||||||
Sbjct 1987 TCATGTGGATT-GCCATCAAAGGTGAGGAGTATAAGAAGCTTGTTGTTTTTGACTGAGAT 2045
Score = 82.4 bits (44), Expect = 2e-14
Identities = 48/50 (96%), Gaps = 0/50 (0%)
Strand=Plus/Plus
Query 23 TTCAATGGCTTCTTCCACTACGATCCTTCTGGGACCACCTTCCGTCGCCG 72
|||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct 71 TTCAATGGCTTCTTCCACTACGATCCTTCTTGGTCCACCTTCCGTCGCCG 120
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 104266531965
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5