BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg494662
Length=1188
Score E
Sequences producing significant alignments: (Bits) Value
AT5G43370.1 | Symbols: APT1, PHT2, PHT1;2 | phosphate transport... 1170 0.0
AT5G43350.1 | Symbols: ATPT1, PHT1;1 | phosphate transporter 1;... 1164 0.0
AT5G43360.1 | Symbols: PHT3, ATPT4, PHT1;3 | phosphate transpor... 948 0.0
AT5G43340.1 | Symbols: PHT6, PHT1;6 | phosphate transporter 1;6... 228 1e-58
> AT5G43370.1 | Symbols: APT1, PHT2, PHT1;2 | phosphate transporter
2 | chr5:17415772-17417798 FORWARD LENGTH=1621
Length=1621
Score = 1170 bits (633), Expect = 0.0
Identities = 709/746 (95%), Gaps = 4/746 (1%)
Strand=Plus/Plus
Query 436 GAGGATTTCGTCAAAGACCCCAGACAAAACTATGGCTTGTTCTCCAAGGAATTCCTTCGG 495
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 860 GAGGATGACGTCAAAGACCCCAGACAAAACTATGGCTTGTTCTCCAAGGAATTCCTTAGA 919
Query 496 CGCCATGGGCTTCATCTCCTTGGAACTACCTCCACTTGGTTTTTGCTTGACATTGCCTTC 555
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 920 CGCCATGGACTTCATCTCCTTGGAACTACCTCCACTTGGTTTTTGCTTGACATTGCCTTC 979
Query 556 TACAGCCAAAACTTGTTCCAGAAGGATATTTTCTCGGCCATCGGATGGATCCCAAAGCCA 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 980 TACAGCCAAAACTTGTTCCAGAAGGATATTTTCTCGGCCATCGGATGGATCCCAAAGGCA 1039
Query 616 GCCACCATGAACGCGAGCCATGAGGTTTTCAGGATTGCTAGGGCTCAGACTCTTATCGCC 675
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1040 GCCACCATGAACGCCACCCATGAGGTTTTCAGGATTGCTAGGGCTCAGACTCTTATCGCC 1099
Query 676 CTTTGCAGTACAGTCCCAGGCTACTGGTTCACAGTTGCTTTTATTGATATCATTGGAAGG 735
|||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct 1100 CTTTGCAGTACAGTCCCAGGCTACTGGTTCACAGTTGCGTTTATTGATACCATTGGAAGG 1159
Query 736 TTTGCGATCCAGCTAA-TGGGATTTTTCATGATGACCGTTTTTATGTTTGCAATTGCCTT 794
||| |||||| |||| ||| |||||||||||||||||| ||||||||||| ||||||||
Sbjct 1160 TTTAAGATCCAACTAAATGG-ATTTTTCATGATGACCGTGTTTATGTTTGCCATTGCCTT 1218
Query 795 CCCTTACAACCACTGGACCAAACCAGAAAACCGTATCGGATTCGTGGTTATGTACGCTCT 854
||||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||
Sbjct 1219 CCCTTACAACCACTGGATCAAACCAGAAAACCGTATCGGATTTGTGGTTATGTACTCTCT 1278
Query 855 CACTTTCTTCTTCGCCAATTTTGGTCCAAATGCAACCACTTTTATTGTCCCGGCTGAGAT 914
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1279 TACTTTCTTCTTCGCCAATTTTGGTCCAAATGCAACCACTTTTATTGTCCCTGCTGAGAT 1338
Query 915 ATTCCCGGCCAGACTAAGGTCAACATGTCATGGAATATCGGCCGCGGCTGGTAAGGCTGG 974
|||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1339 ATTCCCGGCCAGGCTAAGGTCAACATGTCATGGAATATCAGCCGCGGCTGGTAAGGCTGG 1398
Query 975 AGCCATCGTTGGAGCCTTCGGGTTCCTATATGCAGCTCAATCA-CAAGACAAGGCCAAGG 1033
||||||| ||||||||||||||||| ||||||| |||||| | ||||||||||| ||||
Sbjct 1399 AGCCATCATTGGAGCCTTCGGGTTCTTATATGCGGCTCAAA-ATCAAGACAAGGCTAAGG 1457
Query 1034 TAGATGCAGGATACCCACCAGGCATCGGAGTTAAGAACTCACTGATCGTGCTTGGTGTTC 1093
| |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct 1458 TGGATGCAGGATACCCACCAGGTATCGGAGTTAAGAACTCATTGATCGTGCTTGGTGTTC 1517
Query 1094 TTAACTTCATCGGTATGCTCTTCACCTTCCTTGTCCCAGAGCCCAAGGGCAAGTCTCTCG 1153
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1518 TTAACTTCATCGGTATGCTCTTCACCTTCCTTGTCCCAGAGCCCAAGGGCAAGTCCCTCG 1577
Query 1154 AGGAACTCTCTGGTGAGGCTGAAGTT 1179
| |||||||||||||| |||||||||
Sbjct 1578 AAGAACTCTCTGGTGAAGCTGAAGTT 1603
Score = 289 bits (156), Expect = 5e-77
Identities = 180/192 (94%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 248 CTCCAACATATGCAGTCGACAGGGTTCTCTCAACGCCTCCTCAAGTTGATTACATTTGGC 307
|||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct 633 CTCCAACATATGCAGTAAACAGGGCCCTCTCAACGCCTCCTCAAGTTGATTACATTTGGC 692
Query 308 GAATCATCGTCATGTATGGTGCTTTACCCGCAGCTTTGACTTACTACTGGCGTATGAAGA 367
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 693 GAATCATCGTCATGTTTGGTGCTTTACCCGCAGCTTTGACTTACTACTGGCGTATGAAGA 752
Query 368 TGCCCGAAACAGCTCGTTACACCGCTTTGGTGGCCAAGAACATCAAACAAGCCACAGCAG 427
|||| ||||| || ||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct 753 TGCCTGAAACTGCCCGTTACACCGCTTTGGTTGCCAAGAACATCAAACAAGCCACAGCCG 812
Query 428 ACATGGCCGAGG 439
||||| || |||
Sbjct 813 ACATGTCCAAGG 824
Score = 239 bits (129), Expect = 5e-62
Identities = 146/154 (95%), Gaps = 1/154 (1%)
Strand=Plus/Plus
Query 95 GTTTTGGCTGGGATTTGGTATTGGAGGTGACTACCCTCTTTCTGCCACCATCATGTCTGA 154
||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 448 GTTTTGGTTGGGATTTGGTATTGGAGGTGACTACCCACTTTCTGCCACCATCATGTCTGA 507
Query 155 ATATGCTAACAAGAAGACCCGT-GGGCTTTCATCGCGGCTGTCTTCGCTATGCAAGGTGT 213
||| || ||||||||||||||| ||||||||||||| ||||||||||| |||||||||||
Sbjct 508 ATACGCAAACAAGAAGACCCGTGGGGCTTTCATCGCAGCTGTCTTCGCCATGCAAGGTGT 567
Query 214 TGGTATCTTGGCTGGAGGTTTCGTGGCACTCGCA 247
|||||||||||||||||||||||||||||||||
Sbjct 568 CGGTATCTTGGCTGGAGGTTTCGTGGCACTCGCA 601
Score = 106 bits (57), Expect = 6e-22
Identities = 63/66 (95%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 1 TGTCGCTTCTGGTCTCTCCTTTGGCCACGAAGCCAAGGGTGTCATGACCACCCTTTGCTT 60
|||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct 382 TGTCGCTTCTGGCCTCTCTTTTGGCAACGAAGCCAAGGGTGTCATGACCACCCTTTGCTT 441
Query 61 CTTCAG 66
||||||
Sbjct 442 CTTCAG 447
> AT5G43350.1 | Symbols: ATPT1, PHT1;1 | phosphate transporter
1;1 | chr5:17399789-17401949 REVERSE LENGTH=1783
Length=1783
Score = 1164 bits (630), Expect = 0.0
Identities = 707/745 (95%), Gaps = 2/745 (0%)
Strand=Plus/Plus
Query 436 GAGGATTTCGTCAAAGACCCCAGACAAAACTATGGCTTGTTCTCCAAGGAATTCCTTCGG 495
|||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct 893 GAGGATGACGTCAAAGACCCCAAACAAAACTATGGCTTGTTCTCCAAGGAATTCCTTAGA 952
Query 496 CGCCATGGGCTTCATCTCCTTGGAACTACCTCCACTTGGTTTTTGCTTGACATTGCCTTC 555
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 953 CGCCATGGGCTTCATCTCCTTGGAACTACCTCCACATGGTTTTTGCTTGACATTGCCTTC 1012
Query 556 TACAGCCAAAACTTGTTCCAGAAGGATATTTTCTCGGCCATCGGATGGATCCCAAAGCCA 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1013 TACAGCCAAAACTTGTTCCAGAAGGATATTTTCTCGGCCATCGGATGGATCCCAAAGGCA 1072
Query 616 GCCACCATGAACGCGAGCCATGAGGTTTTCAGGATTGCTAGGGCTCAGACTCTTATCGCC 675
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1073 GCCACCATGAACGCCACCCATGAGGTTTTCAGGATTGCTAGGGCTCAGACTCTTATCGCC 1132
Query 676 CTTTGCAGTACAGTCCCAGGCTACTGGTTCACAGTTGCTTTTATTGATATCATTGGAAGG 735
|||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct 1133 CTTTGCAGTACAGTCCCAGGCTACTGGTTCACAGTTGCGTTTATTGATACCATTGGAAGG 1192
Query 736 TTTGCGATCCAGCTAA-TGGGATTTTTCATGATGACCGTTTTTATGTTTGCAATTGCCTT 794
||| |||||| |||| ||| |||||||||||||||||| ||||||||||| ||||||||
Sbjct 1193 TTTAAGATCCAACTAAATGG-ATTTTTCATGATGACCGTGTTTATGTTTGCCATTGCCTT 1251
Query 795 CCCTTACAACCACTGGACCAAACCAGAAAACCGTATCGGATTCGTGGTTATGTACGCTCT 854
||||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||
Sbjct 1252 CCCTTACAACCACTGGATCAAACCAGAAAACCGTATCGGATTTGTGGTTATGTACTCTCT 1311
Query 855 CACTTTCTTCTTCGCCAATTTTGGTCCAAATGCAACCACTTTTATTGTCCCGGCTGAGAT 914
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1312 TACTTTCTTCTTCGCCAATTTTGGTCCAAATGCAACCACTTTTATTGTCCCTGCTGAGAT 1371
Query 915 ATTCCCGGCCAGACTAAGGTCAACATGTCATGGAATATCGGCCGCGGCTGGTAAGGCTGG 974
|||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct 1372 ATTCCCGGCCAGGCTAAGGTCTACATGTCATGGAATATCAGCCGCGGCTGGTAAGGCTGG 1431
Query 975 AGCCATCGTTGGAGCCTTCGGGTTCCTATATGCAGCTCAATCACAAGACAAGGCCAAGGT 1034
|||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct 1432 AGCCATTGTTGGAGCCTTTGGGTTCCTATATGCGGCTCAATCACAAGACAAGGCCAAGGT 1491
Query 1035 AGATGCAGGATACCCACCAGGCATCGGAGTTAAGAACTCACTGATCGTGCTTGGTGTTCT 1094
||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct 1492 AGACGCAGGATACCCACCAGGCATCGGAGTTAAGAACTCATTGATCATGCTTGGTGTTCT 1551
Query 1095 TAACTTCATCGGTATGCTCTTCACCTTCCTTGTCCCAGAGCCCAAGGGCAAGTCTCTCGA 1154
|||||| |||||||||||||||||||||||||||||||||||||| |||||||| || ||
Sbjct 1552 TAACTTTATCGGTATGCTCTTCACCTTCCTTGTCCCAGAGCCCAAAGGCAAGTCCCTTGA 1611
Query 1155 GGAACTCTCTGGTGAGGCTGAAGTT 1179
|||||||||||||||||||| |||
Sbjct 1612 AGAACTCTCTGGTGAGGCTGAGGTT 1636
Score = 283 bits (153), Expect = 2e-75
Identities = 179/192 (93%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 248 CTCCAACATATGCAGTCGACAGGGTTCTCTCAACGCCTCCTCAAGTTGATTACATTTGGC 307
|||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||
Sbjct 666 CTCCAACATATGCAGTAAACAGGGCCCTCTCAACGCCTCCTCAAGTTGACTACATTTGGC 725
Query 308 GAATCATCGTCATGTATGGTGCTTTACCCGCAGCTTTGACTTACTACTGGCGTATGAAGA 367
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 726 GAATCATCGTCATGTTTGGTGCTTTACCCGCAGCTTTGACTTACTACTGGCGTATGAAGA 785
Query 368 TGCCCGAAACAGCTCGTTACACCGCTTTGGTGGCCAAGAACATCAAACAAGCCACAGCAG 427
|||| ||||| || ||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct 786 TGCCTGAAACTGCCCGTTACACCGCTTTGGTTGCCAAGAACATCAAACAAGCCACAGCCG 845
Query 428 ACATGGCCGAGG 439
||||| || |||
Sbjct 846 ACATGTCCAAGG 857
Score = 239 bits (129), Expect = 5e-62
Identities = 146/154 (95%), Gaps = 1/154 (1%)
Strand=Plus/Plus
Query 95 GTTTTGGCTGGGATTTGGTATTGGAGGTGACTACCCTCTTTCTGCCACCATCATGTCTGA 154
||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 481 GTTTTGGTTGGGATTTGGTATTGGAGGTGACTACCCACTTTCTGCCACCATCATGTCTGA 540
Query 155 ATATGCTAACAAGAAGACCCGT-GGGCTTTCATCGCGGCTGTCTTCGCTATGCAAGGTGT 213
||| || ||||||||||||||| ||||||||||||| ||||||||||| |||||||||||
Sbjct 541 ATACGCAAACAAGAAGACCCGTGGGGCTTTCATCGCAGCTGTCTTCGCCATGCAAGGTGT 600
Query 214 TGGTATCTTGGCTGGAGGTTTCGTGGCACTCGCA 247
|||||||||||||||||||||||||||||||||
Sbjct 601 CGGTATCTTGGCTGGAGGTTTCGTGGCACTCGCA 634
Score = 117 bits (63), Expect = 3e-25
Identities = 65/66 (98%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 1 TGTCGCTTCTGGTCTCTCCTTTGGCCACGAAGCCAAGGGTGTCATGACCACCCTTTGCTT 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 415 TGTCGCTTCTGGTCTCTCTTTTGGCCACGAAGCCAAGGGTGTCATGACCACCCTTTGCTT 474
Query 61 CTTCAG 66
||||||
Sbjct 475 CTTCAG 480
> AT5G43360.1 | Symbols: PHT3, ATPT4, PHT1;3 | phosphate transporter
1;3 | chr5:17409524-17411214 FORWARD LENGTH=1566
Length=1566
Score = 948 bits (513), Expect = 0.0
Identities = 675/755 (89%), Gaps = 4/755 (1%)
Strand=Plus/Plus
Query 436 GAGGATTTCGTCAAAGACCCCAGACAAAACTATGGCTTGTTCTCCAAGGAATTCCTTCGG 495
|||||| |||||| ||||||| | |||||||||||||||||||||||||||||||| |
Sbjct 814 GAGGATGACGTCAAGGACCCCAAAAAAAACTATGGCTTGTTCTCCAAGGAATTCCTTAGA 873
Query 496 CGCCATGGGCTTCATCTCCTTGGAACTACCTCCACTTGGTTTTTGCTTGACATTGCCTTC 555
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 874 CGCCATGGGCTTCATCTCCTTGGGACTACCTCCACTTGGTTTTTGCTTGACATCGCCTTC 933
Query 556 TACAGCCAAAACTTGTTCCAGAAGGATATTTTCTCGGCCATCGGATGGATCCCAAAGCCA 615
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||
Sbjct 934 TACAGCCAAAACTTGTTCCAAAAGGATATTTTCTCGGCCATTGGATGGATCCCAAAGGCA 993
Query 616 GCCACCATGAACGCGAGCCATGAGGTTTTCAGGATTGCTAGGGCTCAGACTCTTATCGCC 675
||||| |||||||| | |||||||||||||| ||||||||||||||||||||| || |||
Sbjct 994 GCCACTATGAACGCCATCCATGAGGTTTTCAAGATTGCTAGGGCTCAGACTCTCATTGCC 1053
Query 676 CTTTGCAGTACAGTCCCAGGCTACTGGTTCACAGTTGCTTTTATTGATATCATTGGAAGG 735
|| ||||||||||||||||| |||||||||||||| || |||||||||||||||||||||
Sbjct 1054 CTCTGCAGTACAGTCCCAGGTTACTGGTTCACAGTAGCCTTTATTGATATCATTGGAAGG 1113
Query 736 TTTGCGATCCAGCTAATGGGATTTTTCATGATGACCGTTTTTATGTTTGCAATTGCCTTC 795
||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1114 TTTGCGATCCAACTAATGGGATTTTTCATGATGACCGTTTTTATGTTTGCTATTGCCTTC 1173
Query 796 CCTTACAACCACTGGACCAAACCAGAAAACCGTATCGGATTCGTGGTTATGTACGCTCTC 855
|| ||||||||||||| |||||| || |||||||||||||||||||||||| | |||
Sbjct 1174 CCATACAACCACTGGATTTTACCAGATAATCGTATCGGATTCGTGGTTATGTACTCACTC 1233
Query 856 AC-TTTCTTCTTCGCCAATTTTGGTCCAAATGCAACCACTTTTATTGTCCCGGCTGAGAT 914
|| ||| ||||||||||| ||||| || |||||||| ||||| |||||||| ||||| ||
Sbjct 1234 ACATTT-TTCTTCGCCAACTTTGGACCCAATGCAACTACTTTCATTGTCCCAGCTGAAAT 1292
Query 915 ATTCCCGGCCAGACTAAGGTCAACATGTCATGGAATATCGGCCGCGGCTGGTAAGGCTGG 974
|| || || || |||||||| || || ||||||||||| ||||| |||||||||||||
Sbjct 1293 CTTTCCAGCAAGGCTAAGGTCTACGTGCCATGGAATATCAGCCGCAACTGGTAAGGCTGG 1352
Query 975 AGCCATCGTTGGAGCCTTCGGGTTCCTATATGCAGCTCAATCACAAGACAAGGCCAAGGT 1034
||||||||||||||||||||||||||||||||| |||||| |||| || ||| |||||
Sbjct 1353 AGCCATCGTTGGAGCCTTCGGGTTCCTATATGCTGCTCAACCACAGGATAAGACCAAGAC 1412
Query 1035 AGATGCAGGATACCCACCAGGCATCGGAGTTAAGAACTCACTGATCGTGCTTGGTGTTC- 1093
||| |||||||||||||| ||||||||||| ||||||||| ||||| |||||||||| |
Sbjct 1413 AGACGCAGGATACCCACCGGGCATCGGAGTCAAGAACTCATTGATCATGCTTGGTGT-CA 1471
Query 1094 TTAACTTCATCGGTATGCTCTTCACCTTCCTTGTCCCAGAGCCCAAGGGCAAGTCTCTCG 1153
||||||| | |||||||||||||||||||| ||||| ||||||||||||||||| || |
Sbjct 1472 TTAACTTTGTTGGTATGCTCTTCACCTTCCTCGTCCCTGAGCCCAAGGGCAAGTCCCTTG 1531
Query 1154 AGGAACTCTCTGGTGAGGCTGAAGTTGACAAGTGA 1188
| |||||||| || |||||||| ||||| || |||
Sbjct 1532 AAGAACTCTCCGGCGAGGCTGAGGTTGATAAATGA 1566
Score = 263 bits (142), Expect = 3e-69
Identities = 164/175 (94%), Gaps = 0/175 (0%)
Strand=Plus/Plus
Query 265 GACAGGGTTCTCTCAACGCCTCCTCAAGTTGATTACATTTGGCGAATCATCGTCATGTAT 324
|||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 604 GACAGGTTTCTATCAACGCCTCCTCAAGCTGATTACATTTGGCGAATCATCGTCATGTTT 663
Query 325 GGTGCTTTACCCGCAGCTTTGACTTACTACTGGCGTATGAAGATGCCCGAAACAGCTCGT 384
||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||
Sbjct 664 GGTGCTTTACCCGCAGCTTTGACTTACTATTGGCGTATGAAGATGCCTGAAACAGCCCGT 723
Query 385 TACACCGCTTTGGTGGCCAAGAACATCAAACAAGCCACAGCAGACATGGCCGAGG 439
||||||||||| || ||||||||||||||||||||||||||||||||| || |||
Sbjct 724 TACACCGCTTTAGTTGCCAAGAACATCAAACAAGCCACAGCAGACATGTCCAAGG 778
> AT5G43340.1 | Symbols: PHT6, PHT1;6 | phosphate transporter 1;6
| chr5:17393598-17395148 REVERSE LENGTH=1551
Length=1551
Score = 228 bits (123), Expect = 1e-58
Identities = 408/544 (75%), Gaps = 26/544 (5%)
Strand=Plus/Plus
Query 468 TGGCTTGTTCTCCAAGGAA-TTCCTTCGGCGCCATGGGCTTCATC-TCCTTGGAACTA-C 524
||||||||||||| | ||| |||||||| || || || || || | | || ||||| | |
Sbjct 849 TGGCTTGTTCTCC-ATGAAGTTCCTTCGCCGTCACGGACTCCA-CTTACTCGGAAC-AGC 905
Query 525 CTCCACTTGGTTTTTGCTTGACATTGCCTTCTACAGCCAAAACTTGTTCCAGAAGGATAT 584
|||||| ||||| | || ||||| || ||||||||||||||||||||||||||||||||
Sbjct 906 CTCCACATGGTTCCTCCTCGACATCGCTTTCTACAGCCAAAACTTGTTCCAGAAGGATAT 965
Query 585 TTTCTCGGCCATCGGATGGATCCCAAAGCC-AGCCACCATGAACGCGAGCCATGAGGTTT 643
||| | |||| || ||| | || | | | ||||||||||| | ||| ||| | |
Sbjct 966 CTTCACCACCATTGGGTGGTTACCTTCGGCTAAA-ACCATGAACGCAATCCAAGAGCTCT 1024
Query 644 TCAGGATTGCTAGGGCTCAGACTCTTA-TCGCCCT-TTGCAGTACAGT-CCCAGGCTACT 700
|| ||| |||| |||||| || | || |||| | |||||| || || ||| || ||||
Sbjct 1025 ACATGATCGCTAAGGCTCAAAC-CATAATCGCT-TGTTGCAGCACCGTTCCC-GGTTACT 1081
Query 701 GGTTCACAGTTGCTTTTATTGAT-ATCATTGGAAGGTTTGCGATCCAGCTAATGGGATTT 759
||||| || | || || ||| || || ||| || ||||||| | ||||| |||
Sbjct 1082 TTTTCACTGTAGGGTTCATCGATTAT-ATGGGACGGAAAAAGATCCAGATCATGGG-TTT 1139
Query 760 TTC-ATGATGACCGTTTTTATGTTTGCAATT--GCCTTCCCTTACAACCACTGGACCAAA 816
| ||||||||| | || ||| | || || ||| | || ||| | || |||||| |
Sbjct 1140 CGCTATGATGACCATCTTCATGCT--CAGTTTAGCCATACCGTACCATCATTGGACCTTA 1197
Query 817 CCAGAAAACCGTATCGGATTCGTGGTTATGTACGCTCTCAC-TTTCTTCTTCGCCAATTT 875
|| | ||||| || || ||||| ||| | ||| || |||| ||| |||||| |||||||
Sbjct 1198 CCGGCTAACCGGATTGGTTTCGTCGTTCTTTACTCTTTCACATTT-TTCTTCTCCAATTT 1256
Query 876 TGGTCCAAATGCAACCACTTTTATTGTCCCGGCTGAGATATTCCCGGCCAG-ACTAAGGT 934
||| || || ||||| ||||| ||||||||||||||||| |||||||| || | ||||||
Sbjct 1257 TGGACCTAACGCAACTACTTTCATTGTCCCGGCTGAGATTTTCCCGGCGAGGA-TAAGGT 1315
Query 935 CAACATGTCATGGAATATCGGCCGCGGCTGGTAAGGCTGGAGCCATCGTTGGAGCCTTCG 994
| || ||||| || |||||||| ||| ||||||| || || || || || || | ||||
Sbjct 1316 CGACTTGTCACGGTATATCGGCGGCGTCTGGTAAAGCCGGTGCGATGGTCGGTTCTTTCG 1375
Query 995 GGTT 998
||||
Sbjct 1376 GGTT 1379
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 58333033290
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5