BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg494726
Length=931
Score E
Sequences producing significant alignments: (Bits) Value
AT5G42930.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 1430 0.0
AT1G56630.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 857 0.0
> AT5G42930.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr5:17210546-17214220 REVERSE LENGTH=1664
Length=1664
Score = 1430 bits (774), Expect = 0.0
Identities = 876/926 (95%), Gaps = 4/926 (0%)
Strand=Plus/Plus
Query 8 AGATGGACTTATTAGGTTTCTACAGCTGTTGGAATGGTTACCAGAAACAAAGGTCAACAG 67
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 565 AGATGGACTTATTAGGTTTCTACAGCTGTTGGAATGGTTACCAGAAACAAAGATCAACGG 624
Query 68 AAGTGATTGTTATAAAAGACACAAGCACAGATCCAAACCTTATCATTGTTAGTTTCAGAG 127
| |||||||||||||| |||||||| |||||||||||||| ||||| |||||||||||||
Sbjct 625 AGGTGATTGTTATAAAGGACACAAGTACAGATCCAAACCTCATCATCGTTAGTTTCAGAG 684
Query 128 GCACTGATCCTTTTGATGCCGATGATTGGTGTACAGACTTGGATCTCTCCTGGTACGAGG 187
||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct 685 GCACTGATCCTTTCGATGCCGATGATTGGTGTACAGACCTGGATCTCTCTTGGTACGAGG 744
Query 188 TTAAGAATGTGGGAAAGATCCATGGCGGATTCATGAAAGCTTTAGGG-CTTCAAAAAGAA 246
||||||||||||||||||| |||||||| |||||||||||||| ||| ||||||||||||
Sbjct 745 TTAAGAATGTGGGAAAGATTCATGGCGGGTTCATGAAAGCTTT-GGGCCTTCAAAAAGAA 803
Query 247 GGATGGCCTAAGGAAGTAAACTTTGACCAAACCCAAAAAGAAACAACTCTATATGCATAC 306
||||||||||| ||||||||| ||||| |||||||||| | |||||||||||||||||||
Sbjct 804 GGATGGCCTAAAGAAGTAAACCTTGACGAAACCCAAAACGCAACAACTCTATATGCATAC 863
Query 307 TACACTGTTAGGCGTAACTTAAAAGAAATTCTCGACCAAAACCCGACATCTAAATTTATA 366
||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 864 TACACTGTTAGGCGTCACTTAAAAGAAATCCTCGACCAAAACCCGACATCTAAATTTATA 923
Query 367 TTGACCGGACATAGCCTAGGTGGGGCTTTAGCTATTCTATTCACGGCTGTGTTAGTCATG 426
|||||||||||||||||||||||||||||||| || |||||||||||||| || || |||
Sbjct 924 TTGACCGGACATAGCCTAGGTGGGGCTTTAGCGATCCTATTCACGGCTGTTTTGGTGATG 983
Query 427 CATGAAGAGGAGCAAATGCTAGAGAGGCTAGAAGGAGTTAACACATTTGGACAGCCACGC 486
||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct 984 CATGATGAGGAGCAAATGCTAGAGAGACTAGAAGGAGTTTACACATTTGGACAGCCACGC 1043
Query 487 GTAGGCGACGAGGAGTTTGGAAATTTCATGAAAGATTCGTTGAAA-AAGTTTGACGTGAA 545
|||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||
Sbjct 1044 GTAGGCGACGAGGAGTTTGGAAATTTCATGAAAGATTCACT-AAAGAAGTTTGACGTGAA 1102
Query 546 GTACGAAAGATATGTTTATTGCAACGACATGGTTCCTAGGTTGCCTTTCGACGACAAGAC 605
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1103 GTATGAAAGATATGTTTATTGCAACGACATGGTTCCTAGGTTGCCTTTCGACGACAAAAC 1162
Query 606 ACTCATGTTCAAACACTTTGGGGCGTGCCTTTACTATGACAGTTTCTATAAAGGAAAGGT 665
||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1163 ACTCATGTTTAAACACTTTGGGGCATGCCTTTACTATGACAGTTTCTATAAAGGAAAGGT 1222
Query 666 AGAGGAAGAAGAGCCAAACAAAAACTACTTTAATCTCTTATGGGTCACACCAAAGATAAT 725
||||||||| || |||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct 1223 AGAGGAAGAGGAACCAAACAAAAACTACTTTAATCTCGTATGGGTTTTACCAAAGATAAT 1282
Query 726 GAATGCAATGTGGGAGTTGATACGTAGTTTCGTCATACCTTATTGGAAAGGTGGAGAGTT 785
||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1283 GAATGCACTGTGGGAGTTGATACGTAGTTTCGTCATGCCTTATTGGAAAGGTGGAGAGTT 1342
Query 786 CAGAGAAGGATGGTTCTTGAGGTGTTTTAGGGTTGTTGCATTGTTGATTCCGGGATTACC 845
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct 1343 CAGAGAAGGATGGTTCTTAAGGTGTTTTAGGGTTGTTGCATTGTTGATTCCTGGATTACC 1402
Query 846 TGCTCACTTTCCTAATGAGTACATCAATGTTACTCTTTTGGGTGATTTACCTGACTCGCA 905
||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 1403 TGCTCACTTCCCTAATGAGTACATCAATGTTACTCTTTTAGGTGACTTACCTGACTCGCA 1462
Query 906 TCTTGATTAAATTTTGACGAAGTCAT 931
||||||||||||||||||||||||||
Sbjct 1463 TCTTGATTAAATTTTGACGAAGTCAT 1488
> AT1G56630.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr1:21223593-21226943 REVERSE LENGTH=1458
Length=1458
Score = 857 bits (464), Expect = 0.0
Identities = 756/895 (84%), Gaps = 28/895 (3%)
Strand=Plus/Plus
Query 7 CAGATGGACTTATTAGGTTTCTACAGCTGTTGGAATGGTTACCA-GAAACAAAGGTCAAC 65
|||||||||||||| ||||||||||||||| ||||| || | |||| ||||||||
Sbjct 502 CAGATGGACTTATTGGGTTTCTACAGCTGTCCGAATGATTTTGATCAAAC-GAGGTCAAC 560
Query 66 AGAAGTGATTGTTATAAAAGACAC--AAGCACAGATCCAAACCTTATCATTGTTAGTTTC 123
||| ||||||||||||| ||||| ||| ||| |||| ||||||||| | || |||||
Sbjct 561 AGAGGTGATTGTTATAAGGGACACAAAAG-ACA-ATCCGAACCTTATCGTCGTCAGTTTT 618
Query 124 AGAGGCACTGATCCTTTTGATGCCGATGATTGGTGTACAGA-CTTGGATCTCTCCTGGTA 182
||||| || |||||||| | |||||||||||||||||||| ||| |||||||| ||| |
Sbjct 619 AGAGGAACCGATCCTTTCAACGCCGATGATTGGTGTACAGACCTT-GATCTCTCTTGGCA 677
Query 183 CGAGGTTAAGAATGTGGGAAAGATCCATGGCGGATTCATGAAAGCTTTAGGGCTTCAAAA 242
| | |||| |||||||||||||||||| ||||||||||||||||||||||| |||| ||
Sbjct 678 CAACGTTATGAATGTGGGAAAGATCCACGGCGGATTCATGAAAGCTTTAGGCCTTCCGAA 737
Query 243 AGAAGGATGGCCT-AAGGAAGTAAACTTTGACCAAACCCAAAA-AGAAACAACTCTA-TA 299
|||||||||| | || ||| |||||| ||||||||||||||| | |||||| || | |
Sbjct 738 AGAAGGATGGTATGAA-GAAATAAACTCTGACCAAACCCAAAATA-AAACAAGTCAACT- 794
Query 300 TGCATACTACAC--TGTTAGGCGTAACTTAAAAGAAATTCTCGACCAAAACCCGACATCT 357
|||||||||||| | ||| ||| | |||||||| || |||| |||||||| |||||
Sbjct 795 TGCATACTACACAATTTTA--CGTCAGTTAAAAGAGGTTTTCGAACAAAACCCAACATCC 852
Query 358 AAATTTATATTGACCGGACATAGCCTAGGTGGGGCTTTAGCTATTCTATTCACGGCTGTG 417
|| ||||| || ||||||||||||||||||| || |||| || || ||||| || |||
Sbjct 853 AAGTTTATCCTGTCCGGACATAGCCTAGGTGGAGCCCTAGCGATCCTGTTCACAGCCGTG 912
Query 418 TTAGTCATGCATGAAGAGGAGCAAATGCTAGAGAGGCTAGAAGGAGTTAACACATTTGGA 477
||| | |||||||| ||| || ||||| | ||||| || ||||||||| ||||||||||
Sbjct 913 TTAATTATGCATGATGAGAAGGAAATGTTGGAGAGACTTGAAGGAGTTTACACATTTGGG 972
Query 478 CAGCCACGCGTAGGCGACGAGGAGTTT-GGAAATTT-CATGAAAGATTCGTTGAAA-AAG 534
|||||||||||||| |||||||| ||| || |||| |||||||| ||| ||| ||
Sbjct 973 CAGCCACGCGTAGGAGACGAGGA-TTTCGG-TATTTATATGAAAGACAAGTT-AAAGGAG 1029
Query 535 TTTGACGTGAAGTACGAAAGATATGTTTATTGCAACGACATGGTTCCTAGGTTGCCTTTC 594
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1030 TTTGACGTGAAGTACAAAAGATATGTTTATTGCAACGACATGGTTCCTAGGTTGCCTTTT 1089
Query 595 GACGACAAGACACTCATGTTCAAACACTTTGGGG-CGTGCCTTTACTATGACAGTTTCTA 653
|||||||||||||||||||||||||| ||||||| | ||||| |||| ||||||||||||
Sbjct 1090 GACGACAAGACACTCATGTTCAAACATTTTGGGGGC-TGCCTCTACTGTGACAGTTTCTA 1148
Query 654 TAAAGGAAAGGTAGAGGAAGAAGAGCCAAACAAAAACTACTTTAATCTCTTATGGGTCAC 713
|||||||||||||| ||||| |||||||||||||||||||| ||| |||| ||||| |
Sbjct 1149 CAAAGGAAAGGTAGAAGAAGAGGAGCCAAACAAAAACTACTTCAATATCTTTTGGGTTAT 1208
Query 714 ACCAAAGATAATGAATGCAATGTGGGAGTTGATACGTAGTTTCGTCATACCTTATTGGAA 773
||| |||||||| || || |||||||||||||| | |||||| ||||| ||| |||| |
Sbjct 1209 ACCGAAGATAATAAACGCGGTGTGGGAGTTGATAAGGAGTTTCATCATATCTTGTTGGCA 1268
Query 774 AGGTGGAGAGTTCAGAGAAGGATGGTTCTTGAGGTGTTTTAGGGTTGTTGCATTGTTGAT 833
|||| |||| | ||||||||||||||| |||| ||||||||| |||| |||||||||||
Sbjct 1269 AGGTAGAGAATACAGAGAAGGATGGTTATTGACGTGTTTTAGACTTGTCGCATTGTTGAT 1328
Query 834 TCCGGGA-TTACCTGCTCACTTTCCTAATGAGTACATCAATGTTACTCTTTTGGG 887
||||||| || |||||||| ||||||||||||||| |||||||| ||||||||||
Sbjct 1329 TCCGGGACTT-CCTGCTCATTTTCCTAATGAGTACGTCAATGTTGCTCTTTTGGG 1382
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 45512137182
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5