BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg494779 Length=1305 Score E Sequences producing significant alignments: (Bits) Value AT5G42560.1 | Symbols: | Abscisic acid-responsive (TB2/DP1, HV... 1580 0.0 > AT5G42560.1 | Symbols: | Abscisic acid-responsive (TB2/DP1, HVA22) family protein | chr5:17014923-17017252 FORWARD LENGTH=1364 Length=1364 Score = 1580 bits (855), Expect = 0.0 Identities = 1133/1256 (90%), Gaps = 64/1256 (5%) Strand=Plus/Plus Query 1 ATAATTTTCAAAGAGGCGTGAC-TTAAAAATCTGCAAAAAAGCAAATCC-------GA-A 51 ||||||||| |||||||||||| ||||||||||| |||||||||||||| || | Sbjct 1 ATAATTTTCTAAGAGGCGTGACTTTAAAAATCTGTAAAAAAGCAAATCCGAAGAAAGAGA 60 Query 52 GAGAGAGAAGGTGATTTTGAAATTTCAGATAACGCCG-A-TATTTTACTCTCGCCGGAGC 109 ||||||||||||||||||||||||||||||||||| | | | ||||| ||||||||||| Sbjct 61 GAGAGAGAAGGTGATTTTGAAATTTCAGATAACGCAGAATTTTTTTATTCTCGCCGGAGT 120 Query 110 TTTCTCCT-CCACCGTCTCTGCTTCTCGCCGCCGCCGTACACAGTTGTTCTTCTCTCCCG 168 |||||||| |||||||||||| |||||| |||||||||||||||||||| |||||| ||| Sbjct 121 TTTCTCCTCCCACCGTCTCTGATTCTCGTCGCCGCCGTACACAGTTGTTGTTCTCTGCCG 180 Query 169 TTTCTTCAAGATGATTGGATCGTTTCTTACAAGAGGCTTGGTGTATGAAAATCATAATGG 228 ||||| |||||||||||||||||||||||||||||| || | | || |||| Sbjct 181 TTTCTGCAAGATGATTGGATCGTTTCTTACAAGAGGATT-G-G--TG---------ATGG 227 Query 229 TGTTGGGTTATGCTTACCCTGCGTATGAATGTTACAAGACTGTTGAAAAGAATAGGCCTG 288 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 228 TGTTGGGCTATGCTTACCCTGCGTATGAATGTTACAAGACTGTTGAAAAGAATAGGCCTG 287 Query 289 AAATTGAGCAACTTCGCTTTTGGTGCCAGTACTGGATATTGGTTGCTTGCTTGACAGTTT 348 |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 288 AAATCGAGCAACTTCGCTTTTGGTGTCAGTACTGGATATTGGTTGCTTGCTTGACAGTTT 347 Query 349 TTGAGAGAGTTGGTGATGCGTTTGTTTCATGGGTTCCAATGTATAGTGAAGCTAAGTTAG 408 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| | Sbjct 348 TTGAGAGAGTTGGTGATGCGTTTGTTTCATGGGTTCCGATGTACAGTGAAGCTAAGTTGG 407 Query 409 CATTCTTCATATACCTGTGGTATCCTAAAACTAGGGGTACTACATATGTCTACGAGTCTT 468 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct 408 CATTCTTCATATACCTGTGGTATCCTAAAACCAGGGGTACTACATATGTCTACGAGTCCT 467 Query 469 TCTTTAGGCCATATCTTTCACAGCATGAGAATGACATAGACCATAGTTTGTTGGAGCTAA 528 |||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||| Sbjct 468 TCTTTAGGCCATATCTCTCACAGCATGAGAATGACATAGACCATAGTTTGCTCGAGCTAA 527 Query 529 GGACAAGAGCTGGAGATATGGCTGTTATATACTGGCAACGAGTTGCAAGCTATGGTCAGA 588 |||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 528 GGACTAGAGCAGGAGATATGGCTGTTATATACTGGCAACGAGTTGCAAGTTATGGTCAGA 587 Query 589 CTAGAATCCTTGAGATTTTGCAGTATGTTGCTG-ACCAATCAACTCCAAGGCCGCAGCCA 647 | ||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||| Sbjct 588 CCAGAATCCTTGAGATTTTGCAGTATGTTGCTGCAC-AATCAACTCCAAGACCGCAGCCA 646 Query 648 ----A-AA-CGTGAAGGTAGAGCT---C---CTGCT---AAGCCTAAGAAAGCCCCTGTC 692 | || |||| |||||||||| | || || ||||||||||||||||||||| Sbjct 647 CCTCAGAAACGTGGAGGTAGAGCTAATCAAGCTCCTGCGAAGCCTAAGAAAGCCCCTGTC 706 Query 693 CCCCAACCAGAATCTGAAGAAGCATCATTACCCTCGTCCCCTAGCTCATCTTCAAGTGAA 752 |||||| ||||| ||||||||| |||||| ||||||| |||||||||||||||||||| Sbjct 707 CCCCAATCAGAACCTGAAGAAGTATCATTGTCCTCGTCTTCTAGCTCATCTTCAAGTGAA 766 Query 753 AATGAAGGTAATGAGCCAACCCGTAAAGCATCAGGCCCGTCAAGACCTAAACCGACAGTG 812 |||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||| Sbjct 767 AATGAAGGTAATGAGCCAACCCGTAAAGTATCAGGCCCGTCAAGACCTAGACCAACAGTG 826 Query 813 ACATCTGTACCAGCCGCAGATCCCAAAAACGCGGATATCACTCAGATAGCACAAAAATCA 872 |||||||||||||| ||||||||||||||||||| || ||||||||||||||| |||||| Sbjct 827 ACATCTGTACCAGCTGCAGATCCCAAAAACGCGGGTACCACTCAGATAGCACAGAAATCA 886 Query 873 GTAGCTTCCCCGATTGTGAACCCGACC-CAATCAACCACCCAAGTGGAAACGGAACCAAT 931 ||||||||||| ||||||||||| ||| || |||||||||||||||||| | | ||| Sbjct 887 GTAGCTTCCCCAATTGTGAACCC-ACCACAGTCAACCACCCAAGTGGAA-C----C-AAT 939 Query 932 GCAGATAGAAGAAGTGGAAGGAGAGGCAGAATCAGGGAATGAAAATCCAAACCCGGAAGG 991 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 940 GCAGATAGAAGAAGTGGAAGGAGAGGCAGAATCAGGGAATGAAAATCCCAACCCGGAAGG 999 Query 992 TCCAAAAGAGACGGTAATGGAGGAGACAATCAGGATGACTCGTGGGAGGTTGAGGAAGAC 1051 |||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1000 TCCAAAGGAGACAGTGATGGAGGAGACAATCAGGATGACTCGTGGGAGGTTGAGGAAGAC 1059 Query 1052 GCGTTCAGAAGAAAGCCGTTGATagaagaagaagaagaagCTGAATTCAAAAAATTGTTA 1111 |||||| ||||||||||||||| | | ||||||||||||||| ||| ||||||||||||| Sbjct 1060 GCGTTCGGAAGAAAGCCGTTGA-A-A-GAAGAAGAAGAAGCTCAATCCAAAAAATTGTTA 1116 Query 1112 ATTACTTGCATAACATTTGTCTCTCTTCTCTCTT--TC-------C-TGCTTCTAGAATT 1161 |||||||||||||| | |||||||||||||||| || | ||||||||||||| Sbjct 1117 CTTACTTGCATAACAGTGGTCTCTCTTCTCTCTTACTCTATGTTTCCTGCTTCTAGAATT 1176 Query 1162 ACGTTGACAGGAACTAACAACTAGTGGGAATGGTTTGTATGAACAGTAAATTTGTT 1217 ||||||||||||||||||||||||||||||||||| ||||||| ||| ||| |||| Sbjct 1177 ACGTTGACAGGAACTAACAACTAGTGGGAATGGTT-GTATGAAAAGTTAATCTGTT 1231 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 64206497055 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5