BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg494798
Length=2033
Score E
Sequences producing significant alignments: (Bits) Value
AT5G42350.1 | Symbols: | Galactose oxidase/kelch repeat superf... 2687 0.0
AT5G42360.1 | Symbols: | Galactose oxidase/kelch repeat superf... 2553 0.0
> AT5G42350.1 | Symbols: | Galactose oxidase/kelch repeat superfamily
protein | chr5:16931534-16934003 FORWARD LENGTH=2120
Length=2120
Score = 2687 bits (1455), Expect = 0.0
Identities = 1887/2086 (90%), Gaps = 68/2086 (3%)
Strand=Plus/Plus
Query 1 AAAATAAAACGAAAAGGGAAAGTGAAATCGTTCCTT-C---TT----TTTTAGCTCTTCC 52
|||||||||||||||||||||| ||||| ||||||| | || |||||| |||||
Sbjct 24 AAAATAAAACGAAAAGGGAAAGCGAAATTGTTCCTTCCTTTTTAGCCTTTTAGGTCTTCG 83
Query 53 AAGTCTCAATTTTCTTC---G---------A--TGCTTTGGATTTGGGGAAAGAACTCTA 98
|| |||||||||||||| | | |||||||||||||| |||| ||||||
Sbjct 84 AATTCTCAATTTTCTTCGGTGATTTCTAAAATCTGCTTTGGATTTGGAGAAACAACTCTG 143
Query 99 TCCGTGTGTGAATCTCCTGAGCATCGAATCTCC-TA--ATGCTCAATGTAAGTGAAATC- 154
|| ||| ||||||| | | |||||||||| | |||||||||| || ||
Sbjct 144 TCTATGTATGAATCT-C---GTTTCGAATCTCCGGAGTTTGCTCAATGT---TG-CTTCT 195
Query 155 GTT--CTTCAA-TTTGTTAGATGACGGATAATGATTTCTGAGAAACCATTGGGA---GAG 208
|| | | || ||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct 196 CTTGGCGTGAAGTTTGTTAGATGACGGATGATGATTTCTGAGAAACCATTGGGAGTGGAG 255
Query 209 GAGTCTATCCGGCAGGATCTGGAGGTTTTAACCGTGTCGAA-GCGGCTTGTGAAAAGTGT 267
|||||||| ||||||||||||||||||||||||||||| || | ||||||||||||||||
Sbjct 256 GAGTCTATACGGCAGGATCTGGAGGTTTTAACCGTGTC-AAGGAGGCTTGTGAAAAGTGT 314
Query 268 TAGCCAGAAGTTGAAGAGAAAGATTCATAAATCCGAGGTGGTTGAAGATGAAGTGGA-TG 326
||||||||||||||||| ||||||||||||| | |||||||| |||||||||| || ||
Sbjct 315 TAGCCAGAAGTTGAAGAAAAAGATTCATAAAACTGAGGTGGTGGAAGATGAAG-AGATTG 373
Query 327 CAAGGGGAGCGGTTAATTGTCTAAGCATCAGTGTTGGTTGCAGAGTTGCTGATACGGGTG 386
||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct 374 CAAGGGGAGCGGTGAATTGTTTAAGTATCAGTGTTGGTTGCAGAGTTGCTGATACGGGTG 433
Query 387 AGGATTTTGAGGA-TCGTAGTGATAAGAGATGGTCTAGTGCTAGTGAGGAGGGTAAGGGA 445
||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||
Sbjct 434 AGGATTTTGAGGATTC-AAGTAATAAGAGATGGTCTAGTGCTAGTGAGGAGGGTAAGGGA 492
Query 446 TTGATGACCATTTGTGGAACCGAAGAAACTAGGTTAGATTGCTTTTCTTATGGGGTTAAA 505
|||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||| |
Sbjct 493 TTGATGACAATTTGTGGAACTGAAGAAACTAGGTTAGATTGTTTTTCTTATGGGGTTAGA 552
Query 506 GAGAGGTTCTGGAAGAAGAATAGTAGAAAATATTTAGCGGACTCGGCCCAGGATTACCGC 565
|||||||||||||||||||||| |||||||||| |||| ||||||| |||||||||||||
Sbjct 553 GAGAGGTTCTGGAAGAAGAATAATAGAAAATATCTAGCAGACTCGGGCCAGGATTACCGC 612
Query 566 AAGCACATATT-CCTTCCCGATGATATTCTGGAAATGTGTTTGATGAGGCTTCCTTTGAC 624
|||||| | || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 613 AAGCACGT-TTATCTTCCCGATGATATTCTGGAAATGTGTTTGATGAGGCTTCCTTTGAC 671
Query 625 CAGCCTATTGAATGCACAGCTTGTTTGCAAGAAATGGCGATCCATGGCCACCACCCAGCG 684
|||| ||||||||||||| ||||||||||||||||||| ||||||||||| ||| |||||
Sbjct 672 CAGCTTATTGAATGCACACCTTGTTTGCAAGAAATGGCAATCCATGGCCAACACTCAGCG 731
Query 685 GTTTCTCCAGATGAGACGAGAAGGCTCCTTTCAAACCCCATGGTTCTTTCTGTTTGCTGC 744
|||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||
Sbjct 732 GTTTCTCCAGATGAGACGAGAAGGCTCCTTTCAAACACCGTGGTTGTTTCTGTTTGCTGC 791
Query 745 TCTTAAAGATGGCTGCTCCTCCGGTGATATTCATGGGTATGATGTTTCTCAGGACAAATG 804
|||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 792 TCTTAAAGATGGATGCTCCTCTGGTGATATTCACGGGTATGATGTTTCTCAGGACAAATG 851
Query 805 GCATAGGGTTGAATCTGATCTACTTAAAGGCTGGTATATGTACTCCGTGACGAGCATCCA 864
||||||| ||||| ||||||||||||||||| ||| ||||||||| ||||||||||||||
Sbjct 852 GCATAGGATTGAAACTGATCTACTTAAAGGCCGGTTTATGTACTCTGTGACGAGCATCCA 911
Query 865 TGAGGAGATTTATGTAATTGGAGGTCGTTCCATGGACAGGAACTCTATT-AAGTCCCACA 923
||||||||||||| || ||||||||||||| |||||||| |||||| || ||||||||||
Sbjct 912 TGAGGAGATTTATATAGTTGGAGGTCGTTCTATGGACAGAAACTCT-TTCAAGTCCCACA 970
Query 924 GAGGGATATTGGTATTCAGCCCTTCAACCAAATCATGGCGTAAAATCGCGTCTATGAGAC 983
||||||| ||||||||||||||||| | |||| ||||||||||||| |||||||||||||
Sbjct 971 GAGGGATCTTGGTATTCAGCCCTTCGATCAAAGCATGGCGTAAAATTGCGTCTATGAGAC 1030
Query 984 ATGCTAGATCACTTCCCATTGTTGGTGCCACTGAAGTTACTTCAGAATTCTCGACCATAC 1043
|||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |
Sbjct 1031 ATGCTAGATCACTTCCCATTGTTGGTGCCACTGAAGTTACTTCAGAGTTTTCGACCATGC 1090
Query 1044 AGACCCAACATAATCGCCAAGATAGACGATTTTACCTGTCACGA-ATGAGCGGAGAATCA 1102
||||| |||| ||||||||||||||||| ||| |||||||| || || ||||||| |||
Sbjct 1091 AGACCAAACAGAATCGCCAAGATAGACGCTTTCACCTGTCAAGAGTTG-GCGGAGAGTCA 1149
Query 1103 GACGTTTATGAAGACCCTCACAGGTTATCTGTAAGACGACAGCACAGAAACTCAGCTGAT 1162
|||||||||||||||||||||||| |||| |||||||||||| |||||||||| ||||||
Sbjct 1150 GACGTTTATGAAGACCCTCACAGGCTATCGGTAAGACGACAGAACAGAAACTCGGCTGAT 1209
Query 1163 CAAAACGGAACTAAATCCCACAGGTTAACAAGACAAAAGCTTGATCGGCATAACCGAAAC 1222
||||| ||||| ||||||||||| |||| |||||||||||||||||||| ||||||||||
Sbjct 1210 CAAAATGGAACCAAATCCCACAGATTAATAAGACAAAAGCTTGATCGGCTTAACCGAAAC 1269
Query 1223 AGCTCCAAGAGATTTGTGCTCATAGCCATAGGAGGTACTGGATTGTTCGATGAGCCACTG 1282
||||||||||||||||||||||| ||||||||||| ||||| || |||||||||||||||
Sbjct 1270 AGCTCCAAGAGATTTGTGCTCATTGCCATAGGAGGCACTGGCTTATTCGATGAGCCACTG 1329
Query 1283 GATTCAGGTGAAATATACGACTCAGCAACAAACACATGGTCAGAAATCCAGAGACTCCCT 1342
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1330 GATTCAGGTGAAATATACGACTCAGCAACAAACACATGGTCAGAAATGCAGAGACTCCCG 1389
Query 1343 ATGGATTTCGGGGTTATAAGCTGTGGGATCATTTGCAATGGAATCTTTTACGCTTATTCT 1402
|||| ||| |||||| |||| |||||||| || |||||||||||||| || |||||||||
Sbjct 1390 ATGGGTTTTGGGGTTGTAAGTTGTGGGATTATATGCAATGGAATCTTCTATGCTTATTCT 1449
Query 1403 GAGAATGATAAGCTATCAGGGTATGACATTGAGAGAGGCTTCTGGATTGCAATCCAAACA 1462
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1450 GAGAATGATAAGCTATCAGGGTATGACATTGAGAGAGGCTTCTGGATTACAATCCAAACA 1509
Query 1463 TCCCCAATCCCTCCTCGAGTTCATGAGTTCTACCCTAAACTCGTCTCGTGCAACCATCGG 1522
|| |||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 1510 TCTCCAATCCCTCCTCGGGTTCATGAGTTCTACCCTAAACTTGTCTCCTGCAACCATCGG 1569
Query 1523 TTGTTCATGCTCTCAGTCTCATGGTGCGATGAAGGAGATGGACAGATTGGAAGGAGAAAC 1582
|||||||||||||| || ||||||||||||||||||||||| || ||||| |||||||||
Sbjct 1570 TTGTTCATGCTCTCTGTTTCATGGTGCGATGAAGGAGATGGGCAAATTGGGAGGAGAAAC 1629
Query 1583 AAAGCGGTGAGAAAGCTGTGGGAGTTGGATCTTGTGTACCTCACATGGAACGAGGTTTCA 1642
|| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1630 AAGGCAGTGAGAAAGCTGTGGGAGTTGGATCTTGTGTACCTCACATGGACCGAGGTTTCA 1689
Query 1643 GTACACCCGGACGCACCAATGGATTGGAACGCCACATATGTCTCAGACCAGAACATAGTA 1702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1690 GTACACCCGGACGCACCAATGGATTGGAACGCCACATATGTCTCAGACCAGAACATACTA 1749
Query 1703 ATGGGAGTTGAGATGTTCAAGATCTTTGGGCAGGTATTAAGTTTCTTCACTGTCTGCGAT 1762
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1750 ATGGGAATTGAGATGTTCAAGATCTTTGGGCAGGTATTAAGTTTCTTCACTGTCTGCGAT 1809
Query 1763 ATATTAACGGAAGAAGCTTCTTGGAGACACGTTTCGAGGAACCAAAGGAGTCAAAAACTT 1822
||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1810 GTATTAACTGAAGAAGCCTCTTGGAGACATGTTTCGAGGAACCAAAGGAGTCAAAAACTT 1869
Query 1823 AATCTATCTTGTATGAACAAGACCATTGCATTGCTTCATCTCTGATCTT-TA-A--CTTT 1878
||||||||||||| ||||||||||||||||||||||||||||||||||| | | ||||
Sbjct 1870 AATCTATCTTGTACGAACAAGACCATTGCATTGCTTCATCTCTGATCTTCTTCATTCTTT 1929
Query 1879 T----A-------GGACTAGTCAAAATTGATTGATTCATGTATTGGAAAGAAATGCAATG 1927
| | ||||| ||| |||||||||||||||||||||| ||||||||||||||
Sbjct 1930 TTGTTAACTTTCAGGACTCGTCGAAATTGATTGATTCATGTATTGAAAAGAAATGCAATG 1989
Query 1928 TGCTAGTCCCTTAGATTGATTTGAAATGTAATGTTTATATTTTAATATTTTCGGGATGTT 1987
||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1990 TGCTAGTTCCT-AGATTGATTTGAAATGTAATATTTATATTTTAATATTTTCGGGATGTT 2048
Query 1988 TAGCAGTGTGTTCAGATTACTATCGAAACTAGGAGAAAAAGTAATT 2033
||||| ||||||||||| ||||||||||| |||| |||||||||||
Sbjct 2049 TAGCAATGTGTTCAGATCACTATCGAAACAAGGAAAAAAAGTAATT 2094
> AT5G42360.1 | Symbols: | Galactose oxidase/kelch repeat superfamily
protein | chr5:16936133-16938486 REVERSE LENGTH=2089
Length=2089
Score = 2553 bits (1382), Expect = 0.0
Identities = 1697/1845 (92%), Gaps = 38/1845 (2%)
Strand=Plus/Plus
Query 164 TTTGTTAGATGACGGATAATGATTTCTGAGAAACCATTGGGAGAGGAGTCTATCCGGCAG 223
||||||||||||||||| ||||||||||||||||| |||||||| || ||||| ||||||
Sbjct 211 TTTGTTAGATGACGGATGATGATTTCTGAGAAACCGTTGGGAGAAGAATCTATACGGCAG 270
Query 224 GATCTGGAGGTTTTAACCGTGTCGAAGCGGCTTGTGAAAAGTGTTAGCCAGAAGTTGAAG 283
|||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||
Sbjct 271 GATCTGGAGGTTTTAACCGTTTCGAGGAGGCTTGTGAAAAGTGTTAGCCAGAAGTTGAAG 330
Query 284 AGAAAGATTCATAAATCCGAGGTGGTTGAAGATGAAGTGGATGCAAGGGGAGCGGTTAAT 343
| ||| ||||||||| | |||||||| |||||||||| || ||||||||||||||| |||
Sbjct 331 AAAAAAATTCATAAAACTGAGGTGGTGGAAGATGAAGAGGTTGCAAGGGGAGCGGTGAAT 390
Query 344 TGTCTAAGCATCAGTGTTGGTTGCAGAGTTGCTGATACGGGTGAGGATTTT---GAGGAT 400
||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 391 TGTTTAAGCATCAGTGTTGGTTGCAGAGTTGCTGATACGGGTGAGGATTTTGAGGAGGAT 450
Query 401 CGT-AGTGATAAGAGATGGTCTAGTGCTAGTGAGGAGGGTAAGGGATTGATGACCATTTG 459
| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 451 -TTAAGTAATAAGAGATGGTCTAGTGCTAGTGAGGATGGTAAGGGATTGATGACCATTTG 509
Query 460 TGGAACCGAAGAAACTAGGTTAGATTGCTTTTCTTATGGGGTTAAAGAGAGGTTCTGGAA 519
|||||| ||||||| |||||||||||| |||||||||||||||| |||||||||||||||
Sbjct 510 TGGAACTGAAGAAATTAGGTTAGATTGTTTTTCTTATGGGGTTAGAGAGAGGTTCTGGAA 569
Query 520 GAAGAATAGTAGAAAATA-TTTAGCGGACTCGGCCCAGGATTACCGCAAGCACATATT-C 577
|||||||| ||||| ||| || |||||||||| ||||||||||||||||||| | ||
Sbjct 570 GAAGAATAATAGAAGATACCTT-GCGGACTCGGGCCAGGATTACCGCAAGCACGT-TTAT 627
Query 578 CTTCCCGATGATATTCTGGAAATGTGTTTGATGAGGCTTCCTTTGACCAGCCTATTGAAT 637
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 628 CTTCCCGATGATATTCTGGAAATGTGTTTGATGAGGCTTCCTTTGACCAGCTTATTGAAT 687
Query 638 GCACAGCTTGTTTGCAAGAAATGGCGATCCATGGCCACCACCCAGCGGTTTCTCCAGATG 697
||||| ||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||
Sbjct 688 GCACACCTTGTTTGCAAGAAATGGCAATCCATGGCCAACACTCAGCGGTTTCTCCAGATG 747
Query 698 AGACGAGAAGGCTCCTTTCAAACCCCATGGTTCTTTCTGTTTGCTGCTCTTAAAGATGGC 757
||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||
Sbjct 748 AGACGAGAAGGCTCCTTTCAAACACCGTGGTTGTTTCTGTTTGCTGCTCTTAAAGATGGA 807
Query 758 TGCTCCTCCGGTGATATTCATGGGTATGATGTTTCTCAGGACAAATGGCATAGGGTTGAA 817
|||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct 808 TGCTCCTCTGGTGATATTCACGGGTATGATGTTTCTCAGGACAAATGGCATAGGATTGAA 867
Query 818 TCTGATCTACTTAAAGGCTGGTATATGTACTCCGTGACGAGCATCCATGAGGAGATTTAT 877
||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||
Sbjct 868 ACTGATCTACTTAAAGGCCGGTTTATGTACTCCGTGACAAGCATCCATGAGGAGATTTAT 927
Query 878 GTAATTGGAGGTCGTTCCATGGACAGGAACTCTATT-AAGTCCCACAGAGGGATATTGGT 936
|| ||||||||||||| |||||||| |||||| || ||||||||||||||||| |||||
Sbjct 928 ATAGTTGGAGGTCGTTCTATGGACAGAAACTCT-TTCAAGTCCCACAGAGGGATCTTGGT 986
Query 937 ATTCAGCCCTTCAACCAAATCATGGCGTAAAATCGCGTCTATGAGACATGCTAGATCACT 996
|||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 987 ATTCAGCCCTTCGATCAAAGCATGGCGTAAAATCGCGTCTATGAGACATGCTAGATCACT 1046
Query 997 TCCCATTGTTGGTGCCACTGAAGTTACTTCAGAATTCTCGACCATACAGACCCAACATAA 1056
||||||||||||||||||||||||||||||||| || |||||||| |||||| |||| ||
Sbjct 1047 TCCCATTGTTGGTGCCACTGAAGTTACTTCAGAGTTTTCGACCATGCAGACCAAACAGAA 1106
Query 1057 TCGCCAAGATAGACGATTTTACCTGTCACGAAT-GAGCGGAGAATCAGACGTTTATGAAG 1115
||||||||||||||| ||| |||||||| || | | ||||||| ||||||||||||||||
Sbjct 1107 TCGCCAAGATAGACGCTTTCACCTGTCAAGAGTTG-GCGGAGAGTCAGACGTTTATGAAG 1165
Query 1116 ACCCTCACAGGTTATCTGTAAGACGACAGCACAGAAACTCAGCTGATCAAAACGGAACTA 1175
||||||||||| |||| |||||||||||| |||||||||| ||||||||||| ||||| |
Sbjct 1166 ACCCTCACAGGCTATCGGTAAGACGACAGAACAGAAACTCGGCTGATCAAAATGGAACCA 1225
Query 1176 AATCCCACAGGTTAACAAGACAAAAGCTTGATCGGCATAACCGAAACAGCTCCAAGAGAT 1235
|||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1226 AATCCCACAGATTAATAAGACAAAAGCTTGATCGGCTTAACCGAAACAGCTCCAAGAGAT 1285
Query 1236 TTGTGCTCATAGCCATAGGAGGTACTGG-ATTGTTCGATGAGCCACTGGATTCAGGTGAA 1294
|||||||||| ||||||||||| ||||| || |||||||||||||||||||||||||||
Sbjct 1286 TTGTGCTCATTGCCATAGGAGGCACTGGCATA-TTCGATGAGCCACTGGATTCAGGTGAA 1344
Query 1295 ATATACGACTCAGCAACAAACACATGGTCAGAAATCCAGAGACTCCCTATGGATTTCGGG 1354
||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||| |||
Sbjct 1345 ATATACGACTCAGCAACAAACACATGGTCAGAAATGCAGAGACTCCCGATGGGTTTTGGG 1404
Query 1355 GTTATAAGCTGTGGGATCATTTGCAATGGAATCTTTTACGCTTATTCTGAGAATGATAAG 1414
||| |||| |||||||| || |||||||||||||| || |||||||||||||||||||||
Sbjct 1405 GTTGTAAGTTGTGGGATTATATGCAATGGAATCTTCTATGCTTATTCTGAGAATGATAAG 1464
Query 1415 CTATCAGGGTATGACATTGAGAGAGGCTTCTGGATTGCAATCCAAACATCCCCAATCCCT 1474
|||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct 1465 CTATCAGGGTATGACATTGAGAGAGGCTTCTGGATTACAATCCAAACATCTCCAATCCCT 1524
Query 1475 CCTCGAGTTCATGAGTTCTACCCTAAACTCGTCTCGTGCAACCATCGGTTGTTCATGCTC 1534
||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct 1525 CCTCGGGTTCATGAGTTCTACCCTAAACTTGTCTCCTGCAACCATCGGTTGTTCATGCTC 1584
Query 1535 TCAGTCTCATGGTGCGATGAAGGAGATGGACAGATTGGAAGGAGAAACAAAGCGGTGAGA 1594
|| || ||||||||||||||||||||||| || ||||| ||||||||||| || ||||||
Sbjct 1585 TCTGTTTCATGGTGCGATGAAGGAGATGGGCAAATTGGGAGGAGAAACAAGGCAGTGAGA 1644
Query 1595 AAGCTGTGGGAGTTGGATCTTGTGTACCTCACATGGAACGAGGTTTCAGTACACCCGGAC 1654
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1645 AAGCTGTGGGAGTTGGATCTTGTGTACCTCACATGGACCGAGGTTTCAGTACACCCGGAC 1704
Query 1655 GCACCAATGGATTGGAACGCCACATATGTCTCAGACCAGAACATAGTAATGGGAGTTGAG 1714
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1705 GCACCAATGGATTGGAACGCCACATATGTCTCAGACCAGAACATACTAATGGGAGTTGAG 1764
Query 1715 ATGTTCAAGATCTTTGGGCAGGTATTAAGTTTCTTCACTGTCTGCGATATATTAACGGAA 1774
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1765 ATGTTCAAGATATTTGGGCAGGTATTAAGTTTCTTCACTGTCTGCGATATATTAACGGAA 1824
Query 1775 GAAGCTTCTTGGAGACACGTTTCGAGGAACCAAAGGAGTCAAAAACTTAATCTATCTTGT 1834
||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1825 GAAGCTTCTTGGAGACATGTTTCGAGGAACCAAAGGAATCAAAAACTTAATCTATCTTGT 1884
Query 1835 ATGAACAAGACCATTGCATTGCTTCATCTCTGAT---C-T--TT-A------A---CTTT 1878
|||||||||||||||||||||||||||||||||| | | || | | ||||
Sbjct 1885 ATGAACAAGACCATTGCATTGCTTCATCTCTGATTTTCGTCATTCATTTTTTATAACTTT 1944
Query 1879 TAGGACTAGTCAAAATTGATTGATTCATGTATTG-GAAAGAAATGCAATGTG-CTAGTCC 1936
|||||| ||||||||||||| |||||||||||| ||| |||| |||||||| | |||||
Sbjct 1945 CAGGACTCGTCAAAATTGATTAATTCATGTATTGAGAA-GAAAAGCAATGTGTC-AGTCC 2002
Query 1937 CTTA-GATTGATTTGAAATGTAATGTTTATATT-TTA-ATATTTT 1978
||| ||||||| |||||||||||||||||||| ||| | |||||
Sbjct 2003 CTTGTGATTGATCTGAAATGTAATGTTTATATTCTTACAGATTTT 2047
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 100752493815
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5