BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg494857
Length=3228
Score E
Sequences producing significant alignments: (Bits) Value
AT5G48060.1 | Symbols: | C2 calcium/lipid-binding plant phosph... 5033 0.0
> AT5G48060.1 | Symbols: | C2 calcium/lipid-binding plant phosphoribosyltransferase
family protein | chr5:19475296-19479002
FORWARD LENGTH=3235
Length=3235
Score = 5033 bits (2725), Expect = 0.0
Identities = 3070/3236 (95%), Gaps = 25/3236 (1%)
Strand=Plus/Plus
Query 1 ATGAGAAACACCACCAAACTGGTCGTGCACGTGGTTGATGCTCAATATCTTATGCCCAGA 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGAGAAACACCACCAAACTAGTCGTGCACGTGGTTGATGCTCAATATCTTATGCCCAGA 60
Query 61 GATGGCCAAGGATCAGCAAGTCCTTTTGTAGAAGTCGATTTTCTTAACCAGTTAAGCAAA 120
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct 61 GATGGCCAAGGATCAGCAAGTCCTTTTGTAGAAGTTGATTTCCTTAACCAGTTAAGCAAA 120
Query 121 ACAAGAACCGTACCTAAAAGCCTTAACCCTGTCTGGAACCAGAAACTCTTCTTTGATTAC 180
|||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||
Sbjct 121 ACAAGAACCGTACCTAAAAGCCTTAACCCTGTTTGGAACCAAAAACTCTACTTTGATTAT 180
Query 181 GACCAGAGTGTGATAAGCCATCACAACCAACACATTGAAGTCTCTGTTTACCACGAAAGA 240
|||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||
Sbjct 181 GACCAGAGTGTGATAAACCAGCACAACCAACACATTGAAGTCTCGGTTTACCACGAAAGA 240
Query 241 AGACCGTTTCCCGGTAGAAGTTTCCTCGGTAGAGTCAAGATTCCTCTCTCTAATATTGTT 300
|||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct 241 AGACCGATTCCCGGTAGAAGTTTCCTCGGTAGAGTCAAGATTTCTCTCTGTAATATTGTT 300
Query 301 TACAAGGACGACCAAGTGTATCAACGCTTCACGTTGGAGAAGAAATGGCTTCTCTCTTCT 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 TACAAGGACGACCAAGTGTATCAACGCTTCACGTTGGAGAAGAAATGGCTTCTCTCTTCT 360
Query 361 GTTAAAGGTGAGATTGGTCTCAAATTCTACATTTCATCATCCGAACAAGAGCAAACCTTT 420
|||||||||||||||||||||||||||||||||||||| || ||| |||| ||||| |||
Sbjct 361 GTTAAAGGTGAGATTGGTCTCAAATTCTACATTTCATCGTCAGAAGAAGACCAAACATTT 420
Query 421 CCTCCTCCTCTTCATTCTAAACCTTACACCAGTCCAACTCAAGCCTCTGCCTCTGGAACT 480
|||| | || | |||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct 421 CCTC-T--TC--C-TTCTAAACCTTACACCAGCCCAACACAAGCCTCTGCCTCTGGAACT 474
Query 481 GAAGAAGATACTGCTCATTCTGAAACAGATGATTCTCTAAAGAGTTTTGCATCAGCAGAG 540
||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 475 GAAGAAGATACTGCTGATTCTGAAACAGAAGATTCTCTAAAGAGTTTTGCATCAGCAGAG 534
Query 541 CAAGAAGATCTTCCTGATTCTG-CTAGCGAGTGTGTCAAAGGCAAAAGGACAGAAGAAGT 599
||||||||||| ||||||| | | || ||||||||| |||| |||| || ||||||||
Sbjct 535 GAAGAAGATCTTGCTGATTCGGTC-AGTGAGTGTGTCGAAGGGAAAAAGAGTGAAGAAGT 593
Query 600 TAAAGAACCAGATCAGAAACTACATAGACAAGAAGTTTTTGCTCGGCCAGCACCAATGCA 659
||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 594 TAAAGAACCAGTTCAGAAACTACATAGACAAGAAGTTTTTGCTCGGCCAGCACCTATGCA 653
Query 660 TTCCATTCGCCTGCGCTCTCGTGAAAACCCACATGAAGCC-AAGAAACCGCTGTCTCGTG 718
||||||||||| || |||||||||||||| ||||||||| || |||||| |||||||||
Sbjct 654 GTCCATTCGCCTACGGTCTCGTGAAAACCCGCATGAAGCCCAA-AAACCGATGTCTCGTG 712
Query 719 GAGCTAACCAGCTTCACCCTCAAAACACCAACCACTTGCAATCATATGTTGAAACTGACC 778
|||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||
Sbjct 713 GAGCTAACCAGCTTCACCCTCAAAACCCCAACCACTTGCAATCATATGGTGACACTGACC 772
Query 779 CAGATGACTTTAAGGTGAGAGACATGAACTTGGATCTTGGAGAGAGATGGCCAAATCCAA 838
||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 773 TAGACGACTTTAAGGTGAAAGACATGAACTTGGATCTTGGAGAGAGATGGCCAAATCCAA 832
Query 839 ATGCTGGGGAGAGATTTACGGGCACATACGATCTTGTGGAACAGATGTTTTATCTCTATG 898
||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 833 ATGCTGGAGAAAGATTTACAGGCACATACGATCTTGTGGAACAGATGTTTTATCTCTATG 892
Query 899 TTCGAGTTGTTAAAGCAAAAGAGCTACCACCTGGTTCAATCACTGGCGGATGTGATCCTT 958
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 893 TTCGAGTTGTTAAAGCAAAAGAGCTACCACCTGGTTCAATAACTGGCGGATGTGATCCTT 952
Query 959 ACGTAGAGGTCAAGCTAGGGAATTACAAGGGAAGAACGAAGCACTTT-GATAGGAAGACA 1017
|||| ||||||||||| ||||| ||||||||||||||||| | ||| ||||||||||||
Sbjct 953 ACGTGGAGGTCAAGCTTGGGAACTACAAGGGAAGAACGAAA-ATTTTTGATAGGAAGACA 1011
Query 1018 ACACTTCCTGAATGGAACCAAGTTTTTGCATTTACCAAAGAACGTATTCAATCATCAGTT 1077
||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1012 ACAATTCCTGAATGGAACCAAGTTTTTGCATTTACCAAAGAACGGATTCAATCATCAGTT 1071
Query 1078 CTTGAAGTTTTCGTGAAGGACAAGGAAACTCTAGGTCGAGATGATATTCTTGGAAAGGTA 1137
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1072 CTTGAAGTTTTCGTGAAGGACAAGGAAACACTAGGTCGAGATGATATTCTTGGAAAGGTA 1131
Query 1138 ATGTTTGATCTGAACGAAATCCCAACAAGGGTTCCACCAAACAGCCCTTTGGCTCCACAG 1197
|||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||
Sbjct 1132 GTGTTTGATCTGAACGAGATCCCAACAAGGGTTCCACCAAACAGTCCTTTGGCTCCGCAG 1191
Query 1198 TGGTACCGATTAGAGGATTGGAGAGGAGAAGGCAAAGTAGTACGAGGAGAGATAATGATT 1257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1192 TGGTACCGATTAGAGGATTGGAGAGGAGAAGGCAAAGTAGTACGAGGAGAGATAATGCTT 1251
Query 1258 GCTGTTTGGATGGGAACACAAGCCGATGAAGCTTTTCCTGAAGCATGGCACGCCGACTCT 1317
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1252 GCTGTCTGGATGGGAACTCAAGCCGATGAAGCTTTTCCTGAAGCATGGCACGCCGACTCT 1311
Query 1318 GCTTCTGTTCATGGAGAAGGCGTGTTCAACATCAGATCCAAGGTATATGTATCTCCTAAG 1377
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1312 GCTTCTGTTCATGGAGAAGGCGTGTTCAACATTAGATCCAAGGTATATGTATCTCCTAAG 1371
Query 1378 CTATGGTACTTAAGAGTCAATGTTATCGAAGCTCAAGACATGATCCCGAGTGATAGGAAC 1437
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1372 CTGTGGTACTTAAGAGTCAATGTTATCGAAGCTCAAGACATGATCCCGAGTGATAGAAAC 1431
Query 1438 CGGCTTCCTGATGTTTTCGTCAAAGCCAA-TGTCGGAATGCAAACCCTAAAGACAAGTAT 1496
|||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||
Sbjct 1432 CGGCTTCCTGATGTTTTCGTCAAAGC-AAGTGTTGGAATGCAAACCCTAAAGACAAGTAT 1490
Query 1497 CTGTCCCATGAAGACAACAAATCCACTCTGGAATGAAGATCTTGTCTTTGTAGTTGCTGA 1556
|||| | || ||||| ||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 1491 CTGTTCTATAAAGACCACAAATCCACTCTGGAAAGAAGATCTTGTCTTTGTGGTTGCTGA 1550
Query 1557 GCCATTTGAAGAGCAGCTAGTGATCTCTGTAGAAGACCGCGTTCACACTTCGAAAGATGA 1616
|||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||
Sbjct 1551 GCCATTTGAAGAGCAGCTAGTGATCTCTGTCGAAGACCGCGTTCACACGTCTAAAGATGA 1610
Query 1617 AGTAATTGGCAAGATCACCCTACCGATGAACGTGTTCGAGAAGCGGTTAGACCACCGTCC 1676
||||||||||||||| ||||| ||||||||||||||||| ||||| ||||||||||||||
Sbjct 1611 AGTAATTGGCAAGATTACCCTGCCGATGAACGTGTTCGAAAAGCGTTTAGACCACCGTCC 1670
Query 1677 AGTCCATTCCCGTTGGTTCAATCTTGATAAGTACGGTACCGGAGTTCTAGAGCCAGACTC 1736
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct 1671 AGTCCATTCCCGTTGGTTCAATCTTGATAAGTACGGTACCGGAGTTCTTGAGCCAGACGC 1730
Query 1737 AAGAAGAAAGGAACATAAGTTCTCGAGCCGGATTCACCTACGAATCTGTCTTGAAGGAGG 1796
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1731 AAGAAGAAAAGAACATAAGTTCTCGAGCCGGATTCACCTACGAATCTGTCTTGAAGGAGG 1790
Query 1797 CTACCATGTGATGGACGAGTCAACAATGTACATTAGCGACACAAGACCTACGGCTAGACA 1856
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1791 CTACCATGTGATGGACGAGTCAACAATGTACATTAGCGACACAAGACCTACAGCTAGACA 1850
Query 1857 GCTGTGGAAGCAGCCGGTGGGAATGTTAGAGATTGGGATTCTTGGAGCAAACGGGTTGGT 1916
| | |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct 1851 GTTATGGAAGCAGCCGGTTGGAATGTTAGAGATTGGGATTCTTGGAGCAAATGGGTTGGT 1910
Query 1917 GCCAATGAAGTTGAAAGACGGTAGAGGAAGCACAAACGCCTACTGTGTGGCTAAGTATGG 1976
|||||||||||| |||||||||||||||||||| ||||| || ||||| |||||||||||
Sbjct 1911 GCCAATGAAGTTAAAAGACGGTAGAGGAAGCACTAACGCTTATTGTGTTGCTAAGTATGG 1970
Query 1977 TCAAAAATGGGTGAGAACCAGAACCATTCTTGACACATTAAGTCCAAGATGGAACGAGCA 2036
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1971 TCAAAAATGGGTGAGAACCAGAACCATTCTTGACACATTAAGTCCTAGATGGAACGAGCA 2030
Query 2037 GTACACATGGGAAGTATATGATCCTTGTACTGTCATTACTCTCGGAGTTTTCGACAATAA 2096
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2031 GTACACATGGGAAGTATATGATCCTTGTACTGTCATTACTCTCGGAGTTTTCGACAATAG 2090
Query 2097 TCATTTGGGTTCTTCACAATCCGGAACTGCAGATTCTAAAGATTCAAGAATTGGAAAGGT 2156
||||||||| ||| |||||||||||||||||||||||| |||| ||||||| ||||||||
Sbjct 2091 TCATTTGGGCTCTGCACAATCCGGAACTGCAGATTCTAGAGATGCAAGAATCGGAAAGGT 2150
Query 2157 TCGCATTAGGCTGTCTACACTAGAGGCTCACAAGATCTACACACATTCATTTCCTCTTCT 2216
||| || ||| ||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct 2151 TCGAATAAGGTTGTCTACACTAGAGGCTCACAAGATCTACACACATTCATTTCCGCTACT 2210
Query 2217 TGTTCTTCAACCGCACGGTCTCaaaaaaaCAGGCGACCTACAACTATCTGTCCGTTTTAC 2276
|||||||||||||||||||||||| ||||| || ||||||||| ||||||||||||||||
Sbjct 2211 TGTTCTTCAACCGCACGGTCTCAAGAAAACGGGGGACCTACAAATATCTGTCCGTTTTAC 2270
Query 2277 GACCCTCTCTTTAACCAACATCATCTACAATTACGGCCACACC-CTTCTCCCCAAAATGC 2335
|| ||||||||| |||||||||||||||||||||||||| || ||||||||||||||||
Sbjct 2271 AACTCTCTCTTTAGCCAACATCATCTACAATTACGGCCAC-CCGCTTCTCCCCAAAATGC 2329
Query 2336 ACTATCTTTTCCCTTTCACGGTCAACCAAGTAGACGGTTTAAGGTACCAAGCCATGAACA 2395
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2330 ACTATCTTTTCCCTTTCACGGTCAACCAAGTAGATGGTTTAAGGTACCAAGCCATGAACA 2389
Query 2396 TTGTTGCAACCCGCCTTGGCCGAGCTGAGCCACCACTTAGGAAAGAGGTCGTCGAGTACA 2455
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2390 TTGTTTCAACCCGCCTTGGCCGAGCTGAGCCACCACTTAGGAAAGAGGTCGTCGAGTACA 2449
Query 2456 TGTTGGATGTAGATTCTCACCTATGGAGCATGAGAAGAAGCAAAGCCAACTTTTTTCGCA 2515
|| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2450 TGCTGGATGTAGATTCTCACTTATGGAGCATGAGAAGAAGCAAAGCCAACTTTTTTCGCA 2509
Query 2516 TAATGTCGCTTCTTTCAGGTTATTTCTTGGTCGGGAAGTGGCTAGAAGATGTTTGCAACT 2575
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2510 TAATGTCGCTTCTTTCAGGTTATTTCTTGGTCGGGAAGTGGCTCGAAGATGTTTGCAACT 2569
Query 2576 GGAGATACCCGGTTACTTCGGTTCTGGTCAATGTCTTGTTCTTCATTTTGGTCATGTACC 2635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2570 GGAGATACCCGGTTACTTCGGTTCTGGTCAATGTCTTGTTCTTCATTTTGGTCATGTACC 2629
Query 2636 CTGAGTTGATTTTGCCTACCATGTTTCTCTACATGTTCTTCATCGGATTGTGGAACTTCA 2695
|||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2630 CTGAACTGATTTTGCCTACCATGTTTCTCTACATGTTCTTCATTGGATTGTGGAACTTCA 2689
Query 2696 GGTCCAGGCCGAGACACCCTCCTCACATGGATATGAAACTTTCATGGGCCGAGGCTGTTG 2755
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct 2690 GGTCCAGGCCGAGACACCCTCCTCACATGGATATGAAACTCTCATGGGCCGAGGCTGTAG 2749
Query 2756 GTCCTGATGAGCTCGATGAAGAGTTTGACACATTCCCAACGTCTCGGTCACAAGAGTTGG 2815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2750 GTCCTGATGAGCTCGATGAAGAGTTTGACACATTCCCAACGTCTCGGTCACAAGAGTTGG 2809
Query 2816 TCCGGCTGAGGTATGACCGGCTCAGAAGCGTGGCAGGTAGGATCCAGACTGTTGTTGGAG 2875
| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2810 TGCGTCTGAGATATGACCGGCTCAGAAGCGTGGCAGGTAGGATCCAGACTGTTGTTGGAG 2869
Query 2876 ATATTGCAGCTCAGGGAGAGAGAATTCAGTCACTTTTAAGCTGGCGAGACCCCAGGGCTA 2935
| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2870 ACATTGCAGCTCAGGGAGAGAGAATCCAGTCACTTTTAAGCTGGCGAGACCCCAGGGCTA 2929
Query 2936 CAAGCCTCTTCATCTTGTTCTGCTTGGCTGCGTCGGTGGTCCTTTACGCAATGCCGTTCA 2995
||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2930 CAAGCCTCTTCATTTTGTTCTGCTTGGCTGCGTCGGTGGTCCTATACGCAATGCCGTTCA 2989
Query 2996 AAGGAATAGCACTAGCTAGTGGGCTATACTATCTAAGGCACCCAAAGTTTAGAAGCAAGT 3055
||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2990 AAGCAATAGCACTAGCCAGTGGGCTATACTATCTAAGGCATCCAAAGTTTAGAAGCAAGT 3049
Query 3056 TACCTTCTCTGCCAAGTAACTTCTTCAAGAGATTGCCGTCTCGTACAGATAGCCTTCTTT 3115
||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||
Sbjct 3050 TACCTTCTCTGCCAAGTAACTTCTTCAAGAGATTGCCGTCTAGTACCGATAGTCTTCTTT 3109
Query 3116 GAC--CTAAA-CTCTTTCTTTTGCAAGATTTACAATAAAATGACTTTGTTATAACTTTTT 3172
||| | ||| ||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct 3110 GACGACCAAAACTCTTTCTTGAGCAAGATTTACAATAAAATGACTTTGTTA-AACTTTTT 3168
Query 3173 CTTTTGTTTCACTTCTAATATGAAATAATATTACGAACATATCATAAGGTTTGTAA 3228
||| |||||||| |||||||||||||||||||||| |||||||||||||||
Sbjct 3169 CTTC-----CACTTCTACTATGAAATAATATTACGAACATGTCATAAGGTTTGTAA 3219
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 160584384543
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5