BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg494901
Length=2665
Score E
Sequences producing significant alignments: (Bits) Value
AT3G32340.1 | Symbols: | transposable element gene | chr3:1327... 4043 0.0
AT3G33011.1 | Symbols: | transposable element gene | chr3:1356... 2717 0.0
AT4G03810.1 | Symbols: | transposable element gene | chr4:1751... 2630 0.0
AT4G07840.1 | Symbols: | transposable element gene | chr4:4652... 2529 0.0
AT3G42471.1 | Symbols: | transposable element gene | chr3:1461... 2516 0.0
AT3G30747.1 | Symbols: | transposable element gene | chr3:1239... 1912 0.0
AT3G32305.1 | Symbols: | transposable element gene | chr3:1325... 1768 0.0
AT3G42182.1 | Symbols: | transposable element gene | chr3:1435... 1297 0.0
AT4G08094.1 | Symbols: | transposable element gene | chr4:4993... 1247 0.0
AT4G07862.1 | Symbols: | transposable element gene | chr4:4688... 937 0.0
AT4G02317.1 | Symbols: | transposable element gene | chr4:1021... 313 7e-84
> AT3G32340.1 | Symbols: | transposable element gene | chr3:13278562-13281228
REVERSE LENGTH=2667
Length=2667
Score = 4043 bits (2189), Expect = 0.0
Identities = 2512/2671 (94%), Gaps = 10/2671 (0%)
Strand=Plus/Minus
Query 1 CATCTTTATAAATCTAATACCAATCGCAGCAGTATGACTCTCATGCTTAGGCTGCGGAAG 60
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct 2667 CATCTTTATAAATCTAATGCCAATCGCAGCAGTATGACTCTCATGCTTCGGCTGCGGAAG 2608
Query 61 AGGTTTAGTAAATA-GATCAGCAACATTTGCATCCGTTGGAACTCTGCTAATCTTCACAT 119
||||||||| || | |||||||||||||||||||||||| |||||| ||| |||||||||
Sbjct 2607 AGGTTTAGT-AAGAGGATCAGCAACATTTGCATCCGTTGAAACTCTTCTAGTCTTCACAT 2549
Query 120 CACCTCTATCAATAATCTCACGAATGAGGTGATATCGCCTTTGTATGTGTTTGGATTTCT 179
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2548 CACCTCTATCAATAATCTCACGAATGAGGTAATATCGCCTTTGTATGTGTTTGGATTTCT 2489
Query 180 GGTGTGATCTAGGTTATTTCGCTTGAGCGATGGCTCCATTGTTATCACAGTAAAGATCGA 239
||||||||||||||| ||| ||||| || ||||| ||||||||||||||||||||||| |
Sbjct 2488 GGTGTGATCTAGGTTCTTTTGCTTGCGCCATGGCACCATTGTTATCACAGTAAAGATCAA 2429
Query 240 TGGGGCCAGAAATACTAGGAACCACACCAAGTTCAGTAATGAACTTCCTAATCCAAACAG 299
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2428 TGGGGTCAGAAATACTAGGAACCACACCAAGTTCAGTAATGAACTTCCTAATCCAAGCAG 2369
Query 300 CCTCCTTAGCCGCTTCAGAAGCAGCTATATACTCAGCCTCAGTTGCAGAGTCTGCCATAG 359
||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||| |
Sbjct 2368 CCTCCTTAGCCGCTTCAGAAGCAGCTATATACTCAGCTTCAATTGTAGAGTCTGCCACAA 2309
Query 360 TGCTCTGTTTGGAACTCTTCCAGCTCACTGCTCCTCCGTTGAGACAAAAGACAAATCCTG 419
|||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct 2308 TGCTCTGTTTGGAACTCTTCCAACTCACTGCTCCTCCGTTGGGACAAAAGACAAATCCTG 2249
Query 420 ATTGAGATCGAAAATCATCTTTGTCTGTCTGAAAGCTGGCATCGGTATAACCACTCACAA 479
||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2248 ATTAAGATCGGAAATCATCTTTGTCTGTCTGAAAGCTGGCATCAGTATAACCACTCACAA 2189
Query 480 CAAGTTCCTCACTTCCTCCATAAACCAAAAACTTATCCTTAGTTCTTTTCAAGTACTTAA 539
|||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||
Sbjct 2188 CAAGTTCCTCACTTCCTCCATAGACCAAAAACTTATCCTTCGTTCTTCTCAAGTACTTAA 2129
Query 540 GGATGTTCTTGACTACTATCCAATGACTTTCACCTGGATCAGACTGGTATCTGCTCGTCA 599
|||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||
Sbjct 2128 GGATGTTCTTGACTACTATCTAGTGACTTTCACCTGGATCAGATTGGTATCTGCTCGTCA 2069
Query 600 TGCTCAAAGCACAAGCAACACCTGGGCGAGTGCAGAGCATAGCATACATGATAGATCCTA 659
||||||||||||| |||||| |||||||||| ||||||||||||| ||||||||||||||
Sbjct 2068 TGCTCAAAGCACATGCAACATCTGGGCGAGTCCAGAGCATAGCATTCATGATAGATCCTA 2009
Query 660 TAGCAGAAGCATATGGAATCTTACTCATCCGCTCTCGCTCATCTTGTGTCGAAGGACACT 719
||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||
Sbjct 2008 TAGCAGAAGCATATGGAATCTTACTCATCCGCTCTCGCTCATCATGCGTCGAAAGACACT 1949
Query 720 GAGTCTTGCTAAGAGTTATGCCATGAGACATTGGTATAAAGCCTTTCTTAGAATCATGCA 779
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1948 GAGTCTTGCTAAGAGTTATGCCATGAGACATTGGTATTAAGCCTTTCTTAGAATCATGCA 1889
Query 780 TATTAAACCTATGCAAGACCTTATCTATATAAGTATCTTGACTTAGTCCAATTATTTTGT 839
|||| ||||| |||||||||||||| ||||||||||| | ||||||||||||||||||||
Sbjct 1888 TATTGAACCTGTGCAAGACCTTATCAATATAAGTATCCTAACTTAGTCCAATTATTTTGT 1829
Query 840 TCAATCTATCTCTATAGATCCTTATTCCAAGAATATAGGCAGCTTCTCCCAAGTCTTTCT 899
| ||||||||||||||||| | |||||||||||||||||||||||| |||| ||||||||
Sbjct 1828 TTAATCTATCTCTATAGATTCGTATTCCAAGAATATAGGCAGCTTCACCCATGTCTTTCT 1769
Query 900 TCTTGAAAATCCATTTACACTCAATAGCTTTTACACCATCAGGTAAATCAACCAAAGTCC 959
||||||| | |||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct 1768 TCTTGAATAGCCATTTACACTCTATGGCTTTTACACCATCAGGTAAATCAACCAAAGTCC 1709
Query 960 ATACTTTGTTTTGTGACATGGATTCCATCTCGGATTTCGCGGCCTCTAACCACTTATCGG 1019
|||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 1708 ATACTTTGTTTTGTGACATGGATTCCATTTCGGATTTCGCGGCCTCTAACCAATTATCGG 1649
Query 1020 AATCGGGGCCCATCATTGCTTCTTCGTATGACGTAGGTTCATCACTCTCTATAATCAATA 1079
||||||||||||||| |||||||||||||||||||||||||| ||| |||||||| ||||
Sbjct 1648 AATCGGGGCCCATCAGTGCTTCTTCGTATGACGTAGGTTCATGACTTTCTATAATAAATA 1589
Query 1080 GATTATGATCATCCATCACCTAATCTCCAAATCTATCGGGTTCGTGACGGTTCCTTTCGG 1139
|| |||||||||||||||| ||||||| |||||||||||||||||||| |||||||||
Sbjct 1588 GAGCATGATCATCCATCACCCAATCTCCGAATCTATCGGGTTCGTGACGACTCCTTTCGG 1529
Query 1140 ACCTACGTACCTCAGGTTCCACAGGTGTAGATTCTACGACTCTTCGTAGATCTAACTGAT 1199
|||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||| ||
Sbjct 1528 ACCTACGTACCTCAGGTTCCACAGGTATAGGTTCTACGACTCTTCGTAGATCCAACTTAT 1469
Query 1200 GTTCTTCCTGAGAAGTTGGAACATC-CTCCTGTGG--CTCGAACTTCTTTGAGTAACACT 1256
|||||||||||||||||| |||||| | ||||||| |||||||||||| |||||| |||
Sbjct 1468 GTTCTTCCTGAGAAGTTGAAACATCAC-CCTGTGGTTCTCGAACTTCTTCGAGTAATACT 1410
Query 1257 TTACTCCCACTAGTTCCTTTTGAAAGAAACTCCCTTTCCAAAAAGGCTCCATTTCGAGCA 1316
|||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct 1409 TTACTCCCACTAGTTCCTTTTGAAAGAAACTCTCTTTCCAAAAAGGCACCATTTCGAGCA 1350
Query 1317 ACAAACACTTTGTTGTCAGTT-GGATGGTAGAAGTAATAACCTTTGGTCTCTTTAGGATA 1375
|||||||| ||||||||| || || ||||| ||||||||||||||||||||||| |||||
Sbjct 1349 ACAAACACGTTGTTGTCAATTAGG-TGGTAAAAGTAATAACCTTTGGTCTCTTTCGGATA 1291
Query 1376 ACCTACGAAGTAGCATTTATCAGATTTTGGTCCAAGCTTATCAGTAATCAACCGTTTGAC 1435
||||||||||||||| |||||| | || ||||||||||||||| ||||||| ||||||||
Sbjct 1290 ACCTACGAAGTAGCACTTATCATACTTGGGTCCAAGCTTATCACTAATCAATCGTTTGAC 1231
Query 1436 ATAAGCTTCACATCCCCAAATTTTGAGAAAAGATAAATTAGGAACTTTTCCAGTCCATAT 1495
||||| |||||| ||||||| ||| | |||||| ||||||||||| ||||||||||||||
Sbjct 1230 ATAAGTTTCACAACCCCAAACTTTCACAAAAGACAAATTAGGAACCTTTCCAGTCCATAT 1171
Query 1496 CTCATATGGTGTCTTTTCAACTGATTTTGATGGACATCTGTTTAGCATAAACGCAGACGT 1555
||||||||||||||| |||||| ||||||||||||||||||| |||||||||||| ||||
Sbjct 1170 CTCATATGGTGTCTTCTCAACTTATTTTGATGGACATCTGTTGAGCATAAACGCACACGT 1111
Query 1556 CTCTAGAGCATATCCCCAAAAGGATATTGGAAGATCAGTGTGACTCATCATCGATCGAAC 1615
||||||||||||||||||||||||| || |||||| |||||||||||||| |||||||
Sbjct 1110 CTCTAGAGCATATCCCCAAAAGGATGGTGCAAGATCTGTGTGACTCATCATAGATCGAAA 1051
Query 1616 CATATCCAATAAAGTTCGATTTCTCCTTTCGGACACACCATTCCACTGTGGTGTTCCTGG 1675
||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||
Sbjct 1050 CATATCCAATAAAGTTCGATTTCTCCTTTTAGACACACCATTCCATTGTGGTGTTCCCGG 991
Query 1676 AGGAGTGAGCTGTGAAACAATTCCACACTCTCTGAGATGATCACTGAAAGCTTGGCTCAA 1735
|| |||||||||||||||||||||||| ||||| |||||| |||| ||| ||||||||||
Sbjct 990 AGAAGTGAGCTGTGAAACAATTCCACATTCTCTAAGATGACCACTAAAAACTTGGCTCAA 931
Query 1736 ATATTCTCCTCCACGATCTGATCGAAGAGCTTTTATTGATTTGCCAAGTTGATTTTGTAC 1795
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 930 ATATTCTCCTCCACGATCTGATCGAAGAGCCTTAATTGATTTGCCAAGTTGATTTTGTAC 871
Query 1796 TTCATTCTGGAACTCCTTGAACTTTTCAAAGGATTCCGACTTATGTTTCATTAGATAAAC 1855
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct 870 TTCATTCTGGAACTCCTTGAATTTTTCAAAGGATTCCGATTTATGTTTCATTAGATAAAC 811
Query 1856 ATAACCATATCTACTGAAGTCATCAGTAAATGTAATGAAGTACTGATAGTTTCCTCTGGC 1915
||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct 810 ATAACTATATCTACTGAAGTCATCAGTAAATGTAATGAAATACTGATAGTTTCCTCTAGC 751
Query 1916 GCTTGTATTCATTGGCCCACATACATCTGTATGTATAAGGCCCAATAAATCACTAGCCCT 1975
|||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct 750 ACTTGTACTCATTGGCCCACATACATCTGTATGTATAAGGCCCAATAAGTCACCAGCCCT 691
Query 1976 CTCACTGTGCCCAGTAAATGGGGCCTTAGTCATTTTTCCCAACAAACAAGATTCACAAGT 2035
||||||||| ||| |||| ||||| |||||||||||||||||||||||||||||||| ||
Sbjct 690 CTCACTGTGTCCACTAAACGGGGCTTTAGTCATTTTTCCCAACAAACAAGATTCACATGT 631
Query 2036 CTCATAAGATTCATAATCAAATGAGTTCAAAAGTCCATCACTATGAAGCTTTTGAATGCG 2095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 630 CTCATAAGATTCATAATCAAATGAGTTCAAAAGTCCATCACTATGAAGCTTTTGAATGCG 571
Query 2096 TTTCTCATTTATATGGCCCAAACGACAATGCCAGAGAAAAGTTGGATTCAAGTCATTAGA 2155
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 570 TTTCTCGTTTATATGGCCCAAACGACAATGCCAGAGAAAAGTTGGATTCAAGTCATTAGA 511
Query 2156 CTTAAATCTCTTGGTACGAATGTTATAGACTGGCATGCTTTGGTTTAGAACATAAAGCCC 2215
||||||| | || ||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct 510 CTTAAATATTTTTGTACGTATGTTATAGACTGGCATGCTTTGGTTTAGAACATAGAGCCC 451
Query 2216 ATTCTTTAATGGAGCGCTACCATAAAACATATCATCTCGATCAAATGAACAACATTTGTT 2275
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 450 ATTCTCTAATGGAGCGCTACCATAAAACATATCATCTCGATCAAATGAACAACATTTGTT 391
Query 2276 CTTGATCGAAAAGTGAAAACCTTCCATGTCCAAACATGAAATGGAGATGATATTCTTGTT 2335
||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 390 CTTGATCGAAAAGTGAAAACCTTCCATGTCCAAACATGAAACGGAGACAATATTCTTGTT 331
Query 2336 TATAGCAGGAACATAGTAGCAGTTCTTAAGCTCCAAAACCATGCCTGAAGGTAAAGACAA 2395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 330 TATAGCAGGAACATAGTAGCAGTTCTTAAGCTCCAAAACCATGCCTGAAGGTAAAGACAA 271
Query 2396 CGAATATGTTCCCACGGCTAATGCAGAAACTTTTGCTCCATTAGCCACACGTAGGTCCAC 2455
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 270 CGAATATGTTCCCACGGCCAATGCAGAGACTTTTGCTCCATTAGCCACACGTAGGTCCAC 211
Query 2456 TTGTCCTTCCTCCAAAGTTCTACTGTTGGTTAGGCCATGCACATATACACAAATGTGAGC 2515
|||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct 210 TTGTCCTTCCTCGAAAGTTCTACTGTTGTTTAGGCCATGCACATTTACACAAATGTGAGC 151
Query 2516 ACCACAACCGGTATCCAATACCCAAGGAGTAGAACCAGAAGTAGTAACATTTACTTCTAT 2575
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 150 ACCACAACCGGTATCCAATACCCAAGGAGTAGAACCAGATGTAGTAACATTTACTTCTAT 91
Query 2576 AACATAGATACCCGAAGAAGAAATATTGAATATTTTCTTCTTCTCCAGATCTTCCGAATT 2635
||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |
Sbjct 90 AACATAGATACCCGAAGAAGAAATATTGAATGTTTTCTTCTTCTCCAGATCTTCC-AAGT 32
Query 2636 -TTCAAGAGGGTTTGATCCATTCAATTTGTC 2665
|||| || |||||||| ||| |||||||||
Sbjct 31 ATTCAGGAAGGTTTGATTCATACAATTTGTC 1
> AT3G33011.1 | Symbols: | transposable element gene | chr3:13563190-13566382
REVERSE LENGTH=3193
Length=3193
Score = 2717 bits (1471), Expect = 0.0
Identities = 1677/1777 (94%), Gaps = 11/1777 (1%)
Strand=Plus/Minus
Query 895 TTTCTTCTTGAAAATCCATTTACACTCAATAGCTTTTACACCATCAGGTAAATCAACCAA 954
|||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 1792 TTTCTTCTTGAATATCCATTTACACTCTATGGCTTTTACACCATCAGGTAAATCAACCAA 1733
Query 955 AGTCCATACTTTGTTTTGTGACATGGATTCCATCTCGGATTTCGCGGCCTCTAACCACTT 1014
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1732 AGTCCATACTTTGTTTTGTGACATGGATTCCATTTCGGATTTCGCGGCCTCTAACCACTT 1673
Query 1015 ATCGGAATCGGGGCCCATCATTGCTTCTTCGTATGACGTAGGTTCATCACTCTCTATAAT 1074
||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 1672 ATCGGAATCAGGGCCCATCAACGCTTCTTCGTATGACGTAGGTTCATCACTCTCTATCAT 1613
Query 1075 CAATAGATTATGATCATCCATCACCTAATCTCCAAATCTATCGGGTTCGTGACGGTTCCT 1134
|||||| |||||| ||||||||| ||||||| ||||||||||||||||||||| ||||
Sbjct 1612 AAATAGAGCATGATCGTCCATCACCCAATCTCCGAATCTATCGGGTTCGTGACGGCTCCT 1553
Query 1135 TTCGGACCTACGTACCTCAGGTTCCACAGGTGTAGATTCTACGACTCTTCGTAGATCTAA 1194
|||||||||||||||||||||||||||| || ||| ||||||||||||||||||||| ||
Sbjct 1552 TTCGGACCTACGTACCTCAGGTTCCACATGTATAGGTTCTACGACTCTTCGTAGATCCAA 1493
Query 1195 -CTGATGTTCTTCCTGAGAAGTTGGAACATCCTCC-TGTGG--CTCGAACTTCTTTGAGT 1250
|| |||||||||||||||||||||||||| | || ||||| |||||||||||| ||||
Sbjct 1492 TCT-ATGTTCTTCCTGAGAAGTTGGAACAT-CACCATGTGGTTCTCGAACTTCTTCGAGT 1435
Query 1251 AACACTTTACTCCCACTAGTTCCTTTTGAAAGAAACTCCCTTTCCAAAAAGGCTCCATTT 1310
|| | ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 1434 AATAATTTACTCCCACTAGTTCCTTTTGAAAGAAACTCTCTTTCCAAAAAGGCACCATTT 1375
Query 1311 CGAG-CAACAAACACTTTGTTGTCAGTTGGATGGTAGAAGTAATAACCTTTGGTCTCTTT 1369
|| | |||||||||||||||||||||| || ||||| |||||||||||||||||||||||
Sbjct 1374 CG-GTCAACAAACACTTTGTTGTCAGTAGGGTGGTAAAAGTAATAACCTTTGGTCTCTTT 1316
Query 1370 AGGATAACCTACGAAGTAGCATTTATCAGATTTTGGTCCAAGCTTATCAGTAATCAACCG 1429
|||||||||||||||||||| ||||||||||| |||| |||||||||||||||||| ||
Sbjct 1315 CGGATAACCTACGAAGTAGCACTTATCAGATTTGGGTCTAAGCTTATCAGTAATCAATCG 1256
Query 1430 TTTGACATAAGCTTCACATCCCCAAATTTTGAGAAAAGATAAATTAGGAACTTTTCCAGT 1489
|||||||||||||||||| ||||||||||| |||||||| ||||||||||| ||||| ||
Sbjct 1255 TTTGACATAAGCTTCACAACCCCAAATTTTTAGAAAAGACAAATTAGGAACCTTTCCTGT 1196
Query 1490 CCATATCTCATATGGTGTCTTTTCAACTGATTTTGATGGACATCTGTTTAGCATAAACGC 1549
||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 1195 CCATATCTCATATGGTGTCTTCTCAACTGATTTTGATGGACATCTGTTGAGCATAAACGC 1136
Query 1550 AGACGTCTCTAGAGCATATCCCCAAAAGGATATTGGAAGATCAGTGTGACTCATCATCGA 1609
|||||| |||||||||||||||||||||||| ||||||||| |||||||||||||| ||
Sbjct 1135 AGACGTTTCTAGAGCATATCCCCAAAAGGATGGTGGAAGATCTGTGTGACTCATCATTGA 1076
Query 1610 TCGAACCATATCCAATAAAGTTCGATTTCTCCTTTCGGACACACCATTCCACTGTGGTGT 1669
||||||||||||||||||||||||| | |||||||| || ||||||||||||||||||||
Sbjct 1075 TCGAACCATATCCAATAAAGTTCGA-TCCTCCTTTCAGATACACCATTCCACTGTGGTGT 1017
Query 1670 TCCTGGAGGAGTGAGCTGTGAAACAATTCCACACTCTCTGAGATGATCACTGAAAGCTTG 1729
||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct 1016 TCCCGGAGGAGTGAGCTGTGAAACAATTCCACACTCTCTGAGATGATCACTAAAAACTTG 957
Query 1730 GCTCAAATATTCTCCTCCACGATCTGATCGAAGAGCTTTTATTGATTTGCCAAGTTGATT 1789
|||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||
Sbjct 956 GCTCAAATATTCTCCTCCACGATCTGATCGCAGAGCTTTGATCGATTTGCCAAGTTGATT 897
Query 1790 TTGTACTTCATTCTGGAACTCCTTGAACTTTTCAAAGGATTCCGACTTATGTTTCATTAG 1849
||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 896 TTGTACTTCATTCTGGAACTCCTTGAACTTTTCAAAGGATTCCGATTTATGTTTTATTAG 837
Query 1850 ATAAACATAACCATATCTACTGAAGTCATCAGTAAATGTAATGAAGTACTGATAGTTTCC 1909
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 836 ATAATTATAACCATATCTACTGAAGTCATCAGTAAATGTAATGAAGTACTGATAGTTTCC 777
Query 1910 TCTGGCGCTTGTATTCATTGGCCCACATACATCTGTATGTATAAGGCCCAATAAATCACT 1969
||| || |||||| |||||||||||||||||||||||||||| | ||||||||| |||||
Sbjct 776 TCTAGCACTTGTACTCATTGGCCCACATACATCTGTATGTATTACGCCCAATAAGTCACT 717
Query 1970 AGCCCTCTCACTGTGCCCAGTAAATGGGGCCTTAGTCATTTTTCCCAACAAACAAGATTC 2029
|||| |||||||||| |||||||| ||||| |||||||||||||||||||||||||||||
Sbjct 716 AGCCTTCTCACTGTGTCCAGTAAACGGGGCTTTAGTCATTTTTCCCAACAAACAAGATTC 657
Query 2030 ACAAGTCTCATAAGATTCATAATCAAATGAGTTCAAAAGTCCATCACTATGAAGCTTTTG 2089
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 656 ACATGTCTCATAAGATTCATAATCAAATGAGTTCAAAAGTCCATCACTATGAAGCTTTTG 597
Query 2090 AATGCGTTTCTCATTTATATGGCCCAAACGACAATGCCAGAGAAAAGTTGGATTCAAGTC 2149
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 596 AATGCGTTTCTCGTTTATATGGCCCAAACGACAATGCCAGAGAAAAGTCGGATTCAAGTC 537
Query 2150 ATTAGACTTAAATCTCTTGGTACGAATGTTATAGACTGGCATGCTTTGGTTTAGAACATA 2209
||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct 536 ATTAGACTTAAATCTCTTGGTACGAATGTTATAGATTGACATGCTTTGGTTTAGAACATA 477
Query 2210 AAGCCCATTCTTTAATGGAGCGCTACCATAAAACATATCATCTCGATCAAATGAACAACA 2269
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 476 GAGCCCATTCTCTAATGGAGCGCTACCATAAAACATATCATCTCGATCAAATGAACAACA 417
Query 2270 TTTGTTCTTGATCGAAAAGTGAAAACCTTCCATGTCCAAACATGAAATGGAGATGATATT 2329
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 416 TTTGTTCTTGATCGAAAAGTGAAAACCTTCCATGTCCAAACATGAAACAGAGATGATATT 357
Query 2330 CTTGTTTATAGCAGGAACATAGTAGCAGTTCTTAAGCTCCAAAACCATGCCTGAAGGTAA 2389
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 356 CTTATTTATAGCAGGAACATAGTAGCAGTTCTTAAGCTCCAAAACCATGCCTGAAGGTAA 297
Query 2390 AGACAACGAATATGTTCCCACGGCTAATGCAGAAACTTTTGCTCCATTAGCCACACGTAG 2449
|||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 296 AGACAACGAATATGTTCCCACGGCCAATGCAGAGACTTTTGCTCCATTAGCCACACGTAG 237
Query 2450 GTCCACTTGTCCTTCCTCCAAAGTTCTACTGTTGGTTAGGCCATGCACATATACACAAAT 2509
|||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct 236 GTCCACTTGTCCTTCCTCCAAAGTTCTACTGTTGTTTAGGCCATGCACATTTACACAAAT 177
Query 2510 GTGAGCACCACAACCGGTATCCAATACCCAAGGAGTAGAACCAGAAGTAGTAACATTTAC 2569
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 176 GTGAGCACCACAACCGGTATCCAATACCCAAGGAGTAGAACCAGATGTAGTAACATTTAC 117
Query 2570 TTCTATAACATAGATACCCGAAGAAGAAATATTGAATATTTTCTTCTTCTCCAGATCTTC 2629
|||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct 116 TTCTATAACATAGATACCCGAAGAAGAAATCTTGAATGTTTTCTTCTTCTCCAGATCTTC 57
Query 2630 CGAATTTT-CAAGAGGGTTTGATCCATTCAATTTGTC 2665
| || | | || ||||||||||| |||||||||||||
Sbjct 56 C-AAGTATGCAGGAGGGTTTGATTCATTCAATTTGTC 21
Score = 1410 bits (763), Expect = 0.0
Identities = 850/893 (95%), Gaps = 2/893 (0%)
Strand=Plus/Minus
Query 7 TATAAATCTAATACCAATCGCAGCAGTATGACTCTCATGCTTAGGCTGCGGAAGAGGTTT 66
|||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct 3193 TATAAATCTAATGCCAATCGCAGCAGTATGACTCTCATGCTTTGGCTGCGCAAGAGGTTT 3134
Query 67 AGTAAATA-GATCAGCAACATTTGCATCCGTTGGAACTCTGCTAATCTTCACATCACCTC 125
||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 3133 GGTAAA-AGGATCAGCAACATTTGCATCCGTTGAAACTCTGCTAATCTTCACATCACCTC 3075
Query 126 TATCAATAATCTCACGAATGAGGTGATATCGCCTTTGTATGTGTTTGGATTTCTGGTGTG 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3074 TATCAATAATCTCACGAATGAGGTGATATCGCCTTTGTATGTGTTTGGATTTCTGGTGTG 3015
Query 186 ATCTAGGTTATTTCGCTTGAGCGATGGCTCCATTGTTATCACAGTAAAGATCGATGGGGC 245
||||||||| ||| ||||| |||||||| ||||||| ||||||||||||||| ||||| |
Sbjct 3014 ATCTAGGTTCTTTTGCTTGCGCGATGGCACCATTGTCATCACAGTAAAGATCAATGGGAC 2955
Query 246 CAGAAATACTAGGAACCACACCAAGTTCAGTAATGAACTTCCTAATCCAAACAGCCTCCT 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2954 CAGAAATACTAGGAACCACACCAAGTTCAGTAATGAACTTCCTAATCCAAACAGCCTCCT 2895
Query 306 TAGCCGCTTCAGAAGCAGCTATATACTCAGCCTCAGTTGCAGAGTCTGCCATAGTGCTCT 365
||||||||||||||||||||||||||| ||| ||||||| | ||||||||| ||||||||
Sbjct 2894 TAGCCGCTTCAGAAGCAGCTATATACTTAGCTTCAGTTGTAAAGTCTGCCACAGTGCTCT 2835
Query 366 GTTTGGAACTCTTCCAGCTCACTGCTCCTCCGTTGAGACAAAAGACAAATCCTGATTGAG 425
||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |
Sbjct 2834 CTTTGGAACTCTTCCAACTCACTGTTCCTCCGTTGAGACAAAAGACAAATCCTGATTGTG 2775
Query 426 ATCGAAAATCATCTTTGTCTGTCTGAAAGCTGGCATCGGTATAACCACTCACAACAAGTT 485
|||| ||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||
Sbjct 2774 ATCGGAAATCATCTTTGTCTGTTTGAAAGTTGGCATCAGTATAACCACTCACAACAAGTT 2715
Query 486 CCTCACTTCCTCCATAAACCAAAAACTTATCCTTAGTTCTTTTCAAGTACTTAAGGATGT 545
|||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2714 CCTCACTTCCTCCATAGACCAAAAACTTATCCTTAGTTCTTCTCAAGTACTTAAGGATGT 2655
Query 546 TCTTGACTACTATCCAATGACTTTCACCTGGATCAGACTGGTATCTGCTCGTCATGCTCA 605
|||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2654 TCTTGACTACTATCCAGTGACTTTCACCTGGATCAGATTGGTATCTGCTCGTCATGCTCA 2595
Query 606 AAGCACAAGCAACACCTGGGCGAGTGCAGAGCATAGCATACATGATAGATCCTATAGCAG 665
||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2594 AAGCACATGCAACATCTGGGCGAGTGCAGAGCATAACATACATGATAGATCCTATAGCAG 2535
Query 666 AAGCATATGGAATCTTACTCATCCGCTCTCGCTCATCTTGTGTCGAAGGACACTGAGTCT 725
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct 2534 AAGCATATGGAATCTTACTCATCCGCTCTCGCTCATCATGCGTCGAAGGACACTGAGTCT 2475
Query 726 TGCTAAGAGTTATGCCATGAGACATTGGTATAAAGCCTTTCTTAGAATCATGCATATTAA 785
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2474 TGCTAAGAGTTATGCCATGAGACATTGGTATAAAGCCTTTCTTAGAATCATGCATATTGA 2415
Query 786 ACCTATGCAAGACCTTATCTATATAAGTATCTTGACTTAGTCCAATTATTTTGTTCAATC 845
|||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct 2414 ACCTGTGCAAGACCTTATCTATATAAGTATCCTGACTTAGTCCAATTATTTTGTTTAATC 2355
Query 846 TATCTCTATAGATCCTTATTCCAAGAATATAGGCAGCTTCTCCCAAGTCTTTC 898
||||||||||||| |||||||||||||||||||||||||| |||| |||||||
Sbjct 2354 TATCTCTATAGATTCTTATTCCAAGAATATAGGCAGCTTCACCCATGTCTTTC 2302
> AT4G03810.1 | Symbols: | transposable element gene | chr4:1751259-1754393
FORWARD LENGTH=3135
Length=3135
Score = 2630 bits (1424), Expect = 0.0
Identities = 1627/1727 (94%), Gaps = 6/1727 (0%)
Strand=Plus/Minus
Query 895 TTTCTTCTTGAAAATCCATTTACACTCAATAGCTTTTACACCATCAGGTAAATCAACCAA 954
|||||||||||| |||||||||||||| || | |||||||||||||||||||||||||||
Sbjct 1725 TTTCTTCTTGAATATCCATTTACACTCTATTGGTTTTACACCATCAGGTAAATCAACCAA 1666
Query 955 AGTCCATACTTTGTTTTGTGACATGGATTCCATCTCGGATTTCGCGGCCTCTAACCACTT 1014
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct 1665 AGTCCATACTTTGTTTTGTGACATGGATTCCATTTCAGATTTCGCGGCCTCTAACCACTT 1606
Query 1015 ATCGGAATCGGGGCCCATCATTGCTTCTTCGTATGACGTAGGTTCATCACTCTCTATAAT 1074
||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 1605 ATCGGAATCAGGGCCCATCAACGCTTCTTCGTATGACGTAGGTTCATCACTCTCTATCAT 1546
Query 1075 CAATAGATTATGATCATCCATCACCTAATCTCCAAATCTATCGGGTTCGTGACGGTTCCT 1134
|||||| |||||| ||||||||| |||||| ||||||||||||||||||||| ||||
Sbjct 1545 AAATAGAGCATGATCGTCCATCACCCAATCTCTGAATCTATCGGGTTCGTGACGGCTCCT 1486
Query 1135 TTCGGACCTACGTACCTCAGGTTCCACAGGTGTAGATTCTACGACTCTTCGTAGATCTAA 1194
|||||||||||||||||| ||||||||| || ||| ||||||||||||||||||||| ||
Sbjct 1485 TTCGGACCTACGTACCTCCGGTTCCACAAGTATAGGTTCTACGACTCTTCGTAGATCCAA 1426
Query 1195 CTGATGTTCTTCCTGAGAAGTTGGAACATC-CTCCTGTGG--CTCGAACTTCTTTGAGTA 1251
|||||||||||| ||||||||||||||||| | ||||||| |||||||||||| ||||
Sbjct 1425 CTGATGTTCTTCTTGAGAAGTTGGAACATCAC-CCTGTGGTTCTCGAACTTCTTCAAGTA 1367
Query 1252 ACACTTTACTCCCACTAGTTCCTTTTGAAAGAAACTCCCTTTCCAAAAAGGCTCCATTTC 1311
| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct 1366 ATACTTTACTCCCACTAGTTCCTTTTGAAAGAAACTCTCTTTCCAAAAAGGCACCATTTC 1307
Query 1312 GAGCAACAAACACTTTGTTGTCAGTTGGATGGTAGAAGTAATAACCTTTGGTCTCTTTAG 1371
|| |||||||||||||||||||||| || ||||| || |||||||||||||||||||| |
Sbjct 1306 GAACAACAAACACTTTGTTGTCAGTAGGGTGGTAAAAATAATAACCTTTGGTCTCTTTCG 1247
Query 1372 GATAACCTACGAAGTAGCATTTATCAGATTTTGGTCCAAGCTTATCAGTAATCAACCGTT 1431
|||||||||| |||||||| ||||||||||| |||||||||||||||||||| || ||||
Sbjct 1246 GATAACCTACAAAGTAGCACTTATCAGATTTGGGTCCAAGCTTATCAGTAATTAATCGTT 1187
Query 1432 TGACATAAGCTTCACATCCCCAAATTTTGAGAAAAGATAAATTAGGAACTTTTCCAGTCC 1491
|| |||||| |||||| ||||||||||| |||||||| ||||||||||| ||||||||||
Sbjct 1186 TGGCATAAGATTCACAACCCCAAATTTTCAGAAAAGACAAATTAGGAACCTTTCCAGTCC 1127
Query 1492 ATATCTCATATGGTGTCTTTTCAACTGATTTTGATGGACATCTGTTTAGCATAAACGCAG 1551
||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct 1126 ATATCTCATATGGTGTCTTCTCAACTGATTTTGATGGACATCTGTTGAGCATAAACGCAG 1067
Query 1552 ACGTCTCTAGAGCATATCCCCAAAAGGAT-ATTGGAAGATCAGTGTGACTCATCATCGAT 1610
|||| |||||||||||||||||||||| | | ||||||||| |||||||||||||| |||
Sbjct 1066 ACGTTTCTAGAGCATATCCCCAAAAGGGTGA-TGGAAGATCTGTGTGACTCATCATAGAT 1008
Query 1611 CGAACCATATCCAATAAAGTTCGATTTCTCCTTTCGGACACACCATTCCACTGTGGTGTT 1670
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1007 CGAACCATATCCAATAAAGTTCGATTTCTCCTTTCGGACACACCATTCCATTGTGGTGTT 948
Query 1671 CCTGGAGGAGTGAGCTGTGAAACAATTCCACACTCTCTGAGATGATCACTGAAAGCTTGG 1730
|||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||
Sbjct 947 CCTGGAGGAGTGAGCTGTGAAACAATTCCACACTCTCTAAGATGATCACTAAAAACTTGG 888
Query 1731 CTCAAATATTCTCCTCCACGATCTGATCGAAGAGCTTTTATTGATTTGCCAAGTTGATTT 1790
||||||||||||||||||||||| ||||| |||||||| ||||||||||||| |||||||
Sbjct 887 CTCAAATATTCTCCTCCACGATCCGATCGTAGAGCTTTGATTGATTTGCCAAATTGATTT 828
Query 1791 TGTACTTCATTCTGGAACTCCTTGAACTTTTCAAAGGATTCCGACTTATGTTTCATTAGA 1850
|||||||||||||||||||||||||| |||||||| |||| ||| |||||||||||||||
Sbjct 827 TGTACTTCATTCTGGAACTCCTTGAAATTTTCAAAAGATTTCGATTTATGTTTCATTAGA 768
Query 1851 TAAACATAACCATATCTACTGAAGTCATCAGTAAATGTAATGAAGTACTGATAGTTTCCT 1910
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 767 TAAACATAACCATATCTACTGAAATCATCAGTAAATGTAATGAAGTACTGATAGTTTCCT 708
Query 1911 CTGGCGCTTGTATTCATTGGCCCACATACATCTGTATGTATAAGGCCCAATAAATCACTA 1970
|| || |||||| |||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 707 CTAGCACTTGTACTCATTGGCCCACATACATCTGTATGTATAAGGCCCAATAAGTCACTA 648
Query 1971 GCCCTCTCACTGTGCCCAGTAAATGGGGCCTTAGTCATTTTTCCCAACAAACAAGATTCA 2030
|||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 647 GCCCTCTCACTGTGTCCAGTAAACGGGGCTTTAGTCATTTTTCCCAACAAACAAGATTCA 588
Query 2031 CAAGTCTCATAAGATTCATAATCAAATGAGTTCAAAAGTCCATCACTATGAAGCTTTTGA 2090
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 587 CATGTCTCATAAGATTCATAATCAAATGAGTTCAAAAGTCCATCACTATGAAGCTTTTGA 528
Query 2091 ATGCGTTTCTCATTTATATGGCCCAAACGACAATGCCAGAGAAAAGTTGGATTCAAGTCA 2150
||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 527 ATGTGTTTCTCGTTTATATGGCCCAAACGACAATGCCAGAGAAAAGTGGGATTCAAGTCA 468
Query 2151 TTAGACTTAAATCTCTTGGTACGAATGTTATAGACTGGCATGCTTTGGTTTAGAACATAA 2210
|||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||
Sbjct 467 TTAGACTTAAATTTCTTGGTACGAATGTTATAGATTGGCATGCTTTGGTTCAGAACATGT 408
Query 2211 AGCCCATTCTTTAATGGAGCGCTACCATAAAACATATCATCTCGATCAAATGAACAACAT 2270
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 407 AGCCCATTATCTAATGGAGCGCTACCATAAAACATATCATCTCGATCAAATGAACAACAT 348
Query 2271 TTGTTCTTGATCGAAAAGTGAAAACCTTCCATGTCCAAACATGAAATGGAGATGATATTC 2330
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 347 TTGTTCTTGATCGAAAAGTGAAAACCTTCCATGTCCAAACATGAAACGGAGATGATATTC 288
Query 2331 TTGTTTATAGCAGGAACATAGTAGCAGTTCTTAAGCTCCAAAACCATGCCTGAAGGTAAA 2390
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 287 TTGTTTATTGCAGGAACATAGTAGCAGTTCTTAAGCTCCAAAACCATGCCTGAAGGCAAA 228
Query 2391 GACAACGAATATGTTCCCACGGCTAATGCAGAAACTTTTGCTCCATTAGCCACACGTAGG 2450
|| |||||||||||||||||||| |||||| | |||||||||||||||||||||||||||
Sbjct 227 GATAACGAATATGTTCCCACGGCCAATGCACAGACTTTTGCTCCATTAGCCACACGTAGG 168
Query 2451 TCCACTTGTCCTTCCTCCAAAGTTCTACTGTTGGTTAGGCCATGCACATATACACAAATG 2510
||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct 167 TCCACTTGTCCTTCCTCCAAAGTTCTACTGTTGTTTAGGCCATGCACATTTACACAAATG 108
Query 2511 TGAGCACCACAACCGGTATCCAATACCCAAGGAGTAGAACCAGAAGTAGTAACATTTACT 2570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 107 TGAGCACCACAACCGGTATCCAATACCCAAGGAGTAGAACCAGAAGTAGTAACATTTACT 48
Query 2571 TCTATAACATAGATACCCGAAGAAGAAATATTGAATATTTTCTTCTT 2617
||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct 47 TCTATAACATAGATACCCGAAGAAGAAATCTTGAATGTTTTCTTCTT 1
Score = 1421 bits (769), Expect = 0.0
Identities = 856/899 (95%), Gaps = 2/899 (0%)
Strand=Plus/Minus
Query 1 CATCTTTATAAATCTAATACCAATCGCAGCAGTATGACTCTCATGCTTAGGCTGCGGAAG 60
|||||||||||||||||| |||||||||| |||||||||||||||||| ||||| |||||
Sbjct 3132 CATCTTTATAAATCTAATGCCAATCGCAGTAGTATGACTCTCATGCTTTGGCTGTGGAAG 3073
Query 61 AGGTTTAGT-AAATAGATCAGCAACATTTGCATCCGTTGGAACTCTGCTAATCTTCACAT 119
|||||| || |||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 3072 AGGTTTGGTAAAAT-GATCAGCAACATTTGCATCCGTTGAAACTCTGCTAATCTTCACAT 3014
Query 120 CACCTCTATCAATAATCTCACGAATGAGGTGATATCGCCTTTGTATGTGTTTGGATTTCT 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3013 CACCTCTATCAATAATCTCACGAATGAGGTGATATCGCCTTTGTATGTGTTTGGATTTCT 2954
Query 180 GGTGTGATCTAGGTTATTTCGCTTGAGCGATGGCTCCATTGTTATCACAGTAAAGATCGA 239
|||||||| |||||| ||| ||||| |||||||| ||||||||||||||||||||||| |
Sbjct 2953 GGTGTGATTTAGGTTCTTTTGCTTGTGCGATGGCACCATTGTTATCACAGTAAAGATCAA 2894
Query 240 TGGGGCCAGAAATACTAGGAACCACACCAAGTTCAGTAATGAACTTCCTAATCCAAACAG 299
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2893 TGGGACCAGAAATACTAGGAACCACACCAAGTTCAGTAATGAACTTCCTAATCCAAACAA 2834
Query 300 CCTCCTTAGCCGCTTCAGAAGCAGCTATATACTCAGCCTCAGTTGCAGAGTCTGCCATAG 359
||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||
Sbjct 2833 CCTCCTTAGCCGCTTCAGAAGCAGCTATATACTCAGCTTCAGTTGTAGAGTCTGCCACAG 2774
Query 360 TGCTCTGTTTGGAACTCTTCCAGCTCACTGCTCCTCCGTTGAGACAAAAGACAAATCCTG 419
|||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct 2773 TGCTCTGTTTGGTACTCTTCCAACTCACTGCTCCTCCGTTGAGACAAAAGAAAAATCCTG 2714
Query 420 ATTGAGATCGAAAATCATCTTTGTCTGTCTGAAAGCTGGCATCGGTATAACCACTCACAA 479
|||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2713 ATTGAGATCGGAAATCATCTTTGTCTGTCTGAAAGCTGGCATCAGTATAACCACTCACAA 2654
Query 480 CAAGTTCCTCACTTCCTCCATAAACCAAAAACTTATCCTTAGTTCTTTTCAAGTACTTAA 539
|||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct 2653 CAAGTTCCTCACTTCCTCCATAGACCAAAAACTTATCCTTAGTTCTTCTCAAGTACTTAA 2594
Query 540 GGATGTTCTTGACTACTATCCAATGACTTTCACCTGGATCAGACTGGTATCTGCTCGTCA 599
||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct 2593 AGATGTTCCTGACTACTATCCAGTGACTTTCACCTGGATCAGATTGGTATCTGCTCGTCA 2534
Query 600 TGCTCAAAGCACAAGCAACACCTGGGCGAGTGCAGAGCATAGCATACATGATAGATCCTA 659
||||||||||||| |||||| | ||||||||| |||||||||||||||||||||||||||
Sbjct 2533 TGCTCAAAGCACATGCAACATCGGGGCGAGTGTAGAGCATAGCATACATGATAGATCCTA 2474
Query 660 TAGCAGAAGCATATGGAATCTTACTCATCCGCTCTCGCTCATCTTGTGTCGAAGGACACT 719
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct 2473 TAGCAGAAGCATATGGAATCTTACTCATCCGCTCTCGCTCATCATGCGTCGAAGGACACT 2414
Query 720 GAGTCTTGCTAAGAGTTATGCCATGAGACATTGGTATAAAGCCTTTCTTAGAATCATGCA 779
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2413 GAGTCTTGCTAAGAGTTATGCCATGAGACATTGGTATAAATCCTTTCTTAGAATCATGCA 2354
Query 780 TATTAAACCTATGCAAGACCTTATCTATATAAGTATCTTGACTTAGTCCAATTATTTTGT 839
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2353 TATTGAACCTATGCAAGACCTTATCTATATAAGTATCCTGACTTAGTCCAATTATTTTGT 2294
Query 840 TCAATCTATCTCTATAGATCCTTATTCCAAGAATATAGGCAGCTTCTCCCAAGTCTTTC 898
| ||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||
Sbjct 2293 TTAATCTATCTCTATAGATTCTTATTCCAAGAATATAGGCAGCTTCACCCATGTCTTTC 2235
> AT4G07840.1 | Symbols: | transposable element gene | chr4:4652507-4655715
REVERSE LENGTH=3209
Length=3209
Score = 2529 bits (1369), Expect = 0.0
Identities = 1646/1780 (92%), Gaps = 18/1780 (1%)
Strand=Plus/Minus
Query 895 TTTCTTCTTGAAAATCCATTTACACTCAATAGCTTTTACACCATCAGGTAAATCAACCAA 954
||||||||| |||||| |||||||||| || |||||||||||||||| |||| |||| ||
Sbjct 1819 TTTCTTCTTAAAAATCTATTTACACTCTATGGCTTTTACACCATCAGATAAAGCAACTAA 1760
Query 955 AGTCCATACTTTGTTTTGTGACATGGATTCCATCTCGGATTTCGCGGCCTCTAACCACTT 1014
||||||||||||||||||||||||||||||||| | |||||| |||||||||||||||||
Sbjct 1759 AGTCCATACTTTGTTTTGTGACATGGATTCCATTTTGGATTTTGCGGCCTCTAACCACTT 1700
Query 1015 ATCGGAATCGGGGCCCATCATTGCTTCTTCGTATGACGTAGGTTCATCACTCTCTATAAT 1074
||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||
Sbjct 1699 ATCGGAATCGGGGTCCATCAGTGCTTCTTCGTATGACGTAGGCTCATCACTCTCTATAAT 1640
Query 1075 CAATAGATTATGATCATCCATCACCTAATCTCCAAATCTATCGGGTTCGTGACGGTTCCT 1134
|||||| ||||||||||| ||||| ||||| | ||||||||||||||||||||| ||||
Sbjct 1639 AAATAGAGTATGATCATCCGTCACCCAATCTTCGAATCTATCGGGTTCGTGACGGCTCCT 1580
Query 1135 TTCGGACCTACGTACCTCAGGTTCCACAGGTGTAGATTCTACGACTCTTCGTAGATCTAA 1194
|||||||||||||||||||||||||||| || ||| ||||||||||||| ||||||| ||
Sbjct 1579 TTCGGACCTACGTACCTCAGGTTCCACATGTATAGGTTCTACGACTCTTTGTAGATCCAA 1520
Query 1195 CTG-ATGTTCTTCCTGAGAAGTTGGAACATCCTCC-TGTGG--CTCGAACTTCTTTGAGT 1250
| | |||||||||||||||||||||||||| | || ||||| ||| |||||||| ||||
Sbjct 1519 C-GTATGTTCTTCCTGAGAAGTTGGAACAT-CACCATGTGGTTCTCAAACTTCTTCGAGT 1462
Query 1251 AACACTTTACTCCCACTAGTTCCTTTTGAAAGAAACTCCCTTTCCAAAAAGGCTCCATTT 1310
|| |||| |||| ||||||||||||||||||||||||| |||||| ||||||| ||||||
Sbjct 1461 AATACTTGACTCTCACTAGTTCCTTTTGAAAGAAACTCTCTTTCC-AAAAGGCACCATTT 1403
Query 1311 CGAGCAACAAACACTTTGTTGTCAGTTGGATGGTAGAAGTAATAACCTTTGGTCTCTTTA 1370
|||||||||||||||||||| ||||| || ||||| |||||||||||||||||||||||
Sbjct 1402 CGAGCAACAAACACTTTGTTATCAGTAGGGTGGTAAAAGTAATAACCTTTGGTCTCTTTC 1343
Query 1371 GGATAACCTACGAAGTAGCATTTATCAGATTTTGGTCCAAGCTTATCAGTAATCAACCGT 1430
|||||||||||||| || || ||||||||||| ||||||||||||||||||||||| |||
Sbjct 1342 GGATAACCTACGAAATAACACTTATCAGATTTGGGTCCAAGCTTATCAGTAATCAATCGT 1283
Query 1431 TTGACATAAGCTTCACATCCCCAAATTTTGAGAAAAGATAAATTAGGAACTTTTCCAGTC 1490
||||||||||||||||| ||| ||||||| |||||||||||||||||||| |||||||||
Sbjct 1282 TTGACATAAGCTTCACAGCCCAAAATTTTCAGAAAAGATAAATTAGGAACCTTTCCAGTC 1223
Query 1491 CATATCTCATATGGTGTCTTTTCAACTGATTTTGATGGACATCTGTTTAGCATAAACGCA 1550
|||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||
Sbjct 1222 CATATCTCATATGGTGTCTTCTCAACTGATTTTGATGGACATCTGTTGAGCATAAACACA 1163
Query 1551 GACGTCTCTAGAGCATATCCCCAAAAGGAT-ATTGGAAGATCAGTGTGACTCATCATCGA 1609
|||| ||||| |||||||||||||| ||| | ||||||||| |||||||||||||| ||
Sbjct 1162 TACGTTTCTAGTGCATATCCCCAAAAAGATGA-TGGAAGATCTGTGTGACTCATCATTGA 1104
Query 1610 TCGAACCATATCCAATAAAGTTCGATTTCTCCTTTCGGACACACCATTCCAC-TGTGGTG 1668
|||||||||||||||||||||| ||||||||||||| ||||||||||||| | |||||||
Sbjct 1103 TCGAACCATATCCAATAAAGTTTGATTTCTCCTTTCAGACACACCATTCC-CTTGTGGTG 1045
Query 1669 TTCCTGGAGGAGTGAGCTGTGAAACAATTCCACACTCTCTGAGATGATCACTGAAAGCTT 1728
|||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct 1044 TTCCCGGAGGAGTGAGCTGTGAAACAATTCCACACTCTCTGAGATGATCACTAAAAACTT 985
Query 1729 GGCTCAAATATTCTCCTCCACGATCTGATCGAAGAGCTTTTATTGATTTGCCAAGTTGAT 1788
||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||
Sbjct 984 GGCTCAAATATTCTCCTCCACGATCTGATCGTAGAGCTTTGATTGATTTGCCAAGTTTAT 925
Query 1789 TTTGTACTTCATTCTGGAACTCCTTGAACTTTTCAAAGGATTCCGACTTATGTTTCATTA 1848
||| ||||||||| |||||||||||| ||||||||||||||||| | |||||||||||||
Sbjct 924 TTTTTACTTCATTTTGGAACTCCTTGGACTTTTCAAAGGATTCCAATTTATGTTTCATTA 865
Query 1849 GATAAACATAACCATATCTACTGAAGTCATCAGTAAATGTAATGAAGTACTGATAGTTTC 1908
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 864 GATAAACATAACCATATCTATTGAAGTCATCAGTAAATGTAATGAAGTACTGATAGTTTC 805
Query 1909 CTCTGGCGCTTGTAT-TCATTGGCCCACATACATCTGTATGTATAAGGCCCAATAAATCA 1967
|||| || ||||| | |||||||||||||| ||||||||||||||||||||||||| |||
Sbjct 804 CTCTAGCACTTGT-TCTCATTGGCCCACAT-CATCTGTATGTATAAGGCCCAATAAGTCA 747
Query 1968 CTAGCCCTCTCACTGTGCCCAGTAAATGGGGCCTTAGTCATTTTTCCCAACAAACAAGAT 2027
|||| ||| |||||||| |||||||| || || |||||||||||||||||||||||||||
Sbjct 746 CTAGTCCTTTCACTGTGTCCAGTAAACGGTGCTTTAGTCATTTTTCCCAACAAACAAGAT 687
Query 2028 TCACAAGTCTCATAAGATTCATAATCAAATGAGTTCAAAAGTCCATCACTATGAAGCTTT 2087
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 686 TCACATGTCTCATAAGATTCATAATCAAATGAGTTCAAAAGTCCATCACTATGAAGCTTT 627
Query 2088 TGAATGCGTTTCTCATTTATATGGCCCAAACGACAATGCCAGAGAAAAGTTGGATTCAAG 2147
|||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct 626 TGAATGTGTTTCTCATTTATATGGCCAAAACGACAATGCTAGAGAAAAGTTGGATTCAAG 567
Query 2148 TCATT-AGACTTAAATCTCTTGGTACGAATGTTATAGACTGGCATGCTTTGGTTTAGAAC 2206
| ||| | |||||||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct 566 TGATTTA-ACTTAAATCTCTTGGTGCGAATGTTATAGATTGGCATGCTTTGGTTTAGAAC 508
Query 2207 ATAAAGCCCATTCTTTAATGGAGCGCTACCATAAAACATATCATCTCGATCAAATGAACA 2266
||| ||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 507 ATAGAGCTCATTCTCTAATGGAGCGCTACCATAAAACATATCATTTCGATCAAATGAACA 448
Query 2267 ACATTTGTTCTTGATCGAAAAGTGAAAACCTTCCATGTCCAAACATGAAATGGAGATGAT 2326
|||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct 447 ACATTTGTTCTTGATCAAAAAGTGAAAACCTTCCATGTCCAAACATGAAACGGAGATGAT 388
Query 2327 ATTCTTGTTTATAGCAGGAACATAGTAGCAGTTCTTAAGCTCCAAAACCATGCCTGAAGG 2386
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 387 ATTCTTGTTTATAGCATGAACATAGTAGCAGTTCTTAAGCTCCAAAACCATGCCTGAAGG 328
Query 2387 TAAAGACAACGAATATGTTCCCACGGCTAATGCAGAAACTTTTGCTCCATTAGCCACACG 2446
|||||||| ||||||||||||||| | |||| ||| ||| ||||||||||||||| |||
Sbjct 327 AAAAGACAAGGAATATGTTCCCACGACCAATGTAGAGACTCTTGCTCCATTAGCCATACG 268
Query 2447 TAGGTCCACTTGTCCTTCCTCCAAAGTTCTACTGTTGGTTAGGCCATGCACATATACACA 2506
||||||||||||||||||||||| |||| |||||||| ||| |||||||| || ||||||
Sbjct 267 TAGGTCCACTTGTCCTTCCTCCATAGTTATACTGTTGTTTATGCCATGCATATTTACACA 208
Query 2507 AATGTGAGCACCACAACCGGTATCCAATACCCAAGGAGTAGAACCAGAAGTAGTAACATT 2566
||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||
Sbjct 207 AATGTGAGCACCACAGCCGGTATCCAATTCCCAAGGAGTAAAACCAGAAGTAGTAACATT 148
Query 2567 TACTTCTATAACATAGATACCCGAAGAAGAAATATTGAATATTTTCTTCTTCTCCAGATC 2626
||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||
Sbjct 147 TACTTCTATAACATAGATACCCGAAGAAGAAATCTTGAACGTTTTATTCTTCTCCAGATT 88
Query 2627 TTCCGAATT-TTCAAGAGGGTTTGATCCATTCAATTTGTC 2665
|||| || | ||||||||||||||||||||||||||||||
Sbjct 87 TTCC-AAGTGTTCAAGAGGGTTTGATCCATTCAATTTGTC 49
Score = 1242 bits (672), Expect = 0.0
Identities = 827/900 (92%), Gaps = 17/900 (2%)
Strand=Plus/Minus
Query 1 CATCTTTATAAATCTAATACCAATCGCAG-CAGTATGACTCTCATGCTTAGGCTGCGGAA 59
|||||||||||||||||| |||||| ||| | ||||||||||||||||| ||||||||||
Sbjct 3206 CATCTTTATAAATCTAATGCCAATCACAGTC-GTATGACTCTCATGCTTCGGCTGCGGAA 3148
Query 60 GAGGTTTAGTAAATA-GATCAGCAACATTTGCATCCGTTGGAACTCTGCTAATCTTCACA 118
||||||| ||||| | |||||| ||||||||||||||||| |||||||||||||||||||
Sbjct 3147 GAGGTTTTGTAAA-AGGATCAGTAACATTTGCATCCGTTGAAACTCTGCTAATCTTCACA 3089
Query 119 TCACCTCTATCAATAATCTCACGAATGAGGTGATATCGCCTTTGTATGTGTTTGGATTTC 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3088 TCACCTCTATCAATAATCTCACGAATGAGGTGATATCGCCTTTGTATGTGTTTGGATTTC 3029
Query 179 TGGTGTGATCTAGGTTATTTCGCTTGAGCGATGGCTCCATTGTTATCACAGTAAAGATCG 238
|||||||||||| ||| ||| | ||| |||||||| |||||||||||||||||||||||
Sbjct 3028 TGGTGTGATCTACGTTCTTTTGTTTGCGCGATGGCACCATTGTTATCACAGTAAAGATCA 2969
Query 239 ATGGGGCCAGAAATACTAGGAACCACACCAAGTTCAGTAATGAACTTCCTAATCCAAACA 298
||| |||||| |||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2968 ATGAGGCCAGGAATATTAGGAACCACACTAAGTTCAGTAATGAACTTCCTAATCCAAACA 2909
Query 299 GCCTCCTTAGCCGCTTCAGAAGCAGCTATATACTCAGCCTCAGTTGCAGAGTCTGCCATA 358
||||||||| | |||| |||||||| | ||| |||||| ||||||||||| |
Sbjct 2908 GCCTCCTTAACTGCTTTTGAAGCAGC---A-ACT-----TCAGTTATAGAGTCTGCCACA 2858
Query 359 GTGCTCTGTTTGGAACTCTTCCAGCTCACTG-CTCCTCCGTTGAGACAAAAGACAAATCC 417
||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||
Sbjct 2857 GTGCTCTGTTTGGAACTCTTCCAACTCAC-GACTCCTCCGTTGAGACAAAAGACAAATCC 2799
Query 418 TGATTGAGAT-CGAAAATCATCTTTGTCTGTCTGAAAGCTGGCATCGGTATAACCACTCA 476
| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2798 TAATTGAGATAAAAAAATCATCTTTGTCTGTCTGAAAGCTGGCATCACTATAACCACTCA 2739
Query 477 CAACAAGTTCCTCACTTCCTCCATAAACCAAAAACTTATCCTTAGTTCTTTTCAAGTACT 536
||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||
Sbjct 2738 CAACAAGTTCCTCACTTCCTCCATAGACCAAACACTTATCCTTAGTTCTTCTCAAGTACT 2679
Query 537 TAAGGATGTTCTTGACTACTATCCAATGACTTTCACCTGGATCAGACTGGTATCTGCTCG 596
|| |||||||||||||||||||||||| |||||||||||||||||| | |||||||||||
Sbjct 2678 TATGGATGTTCTTGACTACTATCCAATAACTTTCACCTGGATCAGA-TTGTATCTGCTCG 2620
Query 597 TCATGCTCAAAGCACAAGCAACACCTGGGCGAGTGCAGAGCATAGCATACATGATAGATC 656
|||||||| ||||||| |||||| ||||| ||||||| ||||||||||||||||||||||
Sbjct 2619 TCATGCTCCAAGCACATGCAACATCTGGGAGAGTGCAAAGCATAGCATACATGATAGATC 2560
Query 657 CTATAGCAGAAGCATATGGAATCTTACTCATCCGCTCTCGCTCATCTTGTGTCGAAGGAC 716
|||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct 2559 CTATAGTAGAAGCATATGGAATCTTACTCATCCGCTCTCGCTCATCATGCGTCGAAGGAC 2500
Query 717 ACTGAGTCTTGCTAAGAGTTATGCCATGAGACATTGGTATAAAGCCTTTCTTAGAATCAT 776
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2499 GCTGAGTCTTGCTAAGAGTTATGCCATGAGACATTGGTATAAAGTCTTTCTTAGAATCAT 2440
Query 777 GCATATTAAACCTATGCAAGACCTTATCTATATAAGTATCTTGACTTAGTCCAATTATTT 836
||||||| ||| | |||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct 2439 GCATATTGAACGTGTGCAAGACCTTATCTATATAAGTATCCTGACTTAGTCCAATTACTT 2380
Query 837 TGTTCAATCTATCTCTATAGATCCTTATTCCAAGAATATAGGCAGCTTCTCCCAAGTCTT 896
|||| ||||||||| ||||||| |||||||||||||||||||||||||| |||| |||||
Sbjct 2379 TGTTTAATCTATCTTTATAGATTCTTATTCCAAGAATATAGGCAGCTTCACCCATGTCTT 2320
> AT3G42471.1 | Symbols: | transposable element gene | chr3:14610379-14613555
REVERSE LENGTH=3177
Length=3177
Score = 2516 bits (1362), Expect = 0.0
Identities = 1639/1771 (93%), Gaps = 26/1771 (1%)
Strand=Plus/Minus
Query 895 TTTCTTCTTGAAAATCCATTTACACTCAATAGCTTTTACACCATCAGGTAAATCAACCAA 954
||||||||| ||||||||||||||||| || |||||||||| || |||||||||||||||
Sbjct 1755 TTTCTTCTTAAAAATCCATTTACACTCTATGGCTTTTACACTATTAGGTAAATCAACCAA 1696
Query 955 AGTCCATACTTTGTTTTGTGACATGGATTCCATCTCGGATTTCGCGGCCTCTAACCACTT 1014
||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 1695 AGTCCATTCTTTGTTTTGTGACATGGATTCCATTTCGGATTTTGCGGCCTCTAACCACTT 1636
Query 1015 ATCGGAATCGGGGCCCATCATTGCTTCTTCGTATGACGTAGGTTCATCACTCTCTATAAT 1074
||| |||||||||||||||| ||||||||||| |||||||||||||||||| | ||||||
Sbjct 1635 ATCAGAATCGGGGCCCATCAATGCTTCTTCGTTTGACGTAGGTTCATCACTTTTTATAAT 1576
Query 1075 CAATAGATTATGATCATCCATCACCT-AATCTCCAAATCTATCGGGTTCGTGACGGTTCC 1133
|||||| |||||||||| ||| || ||||| |||||||||||||||||||||||||
Sbjct 1575 AAATAGAGCATGATCATCCGTCA-CTCAATCTATGAATCTATCGGGTTCGTGACGGTTCC 1517
Query 1134 TTTCGGACCTACGTACCTCAGGTTCCACAGGTGTAGATTCTACGACTCTTCGTAGATCTA 1193
|||||||||||| |||||||||||||||| || ||| ||||||||||||||||||||| |
Sbjct 1516 TTTCGGACCTACCTACCTCAGGTTCCACACGTATAGGTTCTACGACTCTTCGTAGATCCA 1457
Query 1194 ACTG-ATGTTCTTCCTGAGAAGTTGGAACATCCTCC-TGTGG--CTCGAACTTCTTTGAG 1249
|| | |||||||||||||||||||||||||| | || ||||| |||||||||||| |||
Sbjct 1456 AC-GTATGTTCTTCCTGAGAAGTTGGAACAT-CACCATGTGGTTCTCGAACTTCTTCGAG 1399
Query 1250 TAACACTTTACTCCCACTAGTTCCTTTTGAAAGAAACTCCCTTTCCAAAAAGGCTCCATT 1309
||| ||||||||||||||||||||||||||||||||||| |||||| || | |||||
Sbjct 1398 TAATACTTTACTCCCACTAGTTCCTTTTGAAAGAAACTCTCTTTCC---AA--CACCATT 1344
Query 1310 TCGAGCAACAAACACTTTGTTGTCAGTTGGATGGTAGAAGTAATAACCTTTGGTCTC-TT 1368
|||||||||||||||||| | ||||||||| ||||| |||||||||||||||||||| ||
Sbjct 1343 TCGAGCAACAAACACTTTCTAGTCAGTTGGGTGGTAAAAGTAATAACCTTTGGTCTCATT 1284
Query 1369 TAGGATAACCTACGAAGTAGCATTTATCAGATTTTGGTCCAAGCTTATCAGTAATCAACC 1428
| ||||||| ||||||||| || ||||||| ||| ||||||||||||||||||||||| |
Sbjct 1283 T-GGATAACTTACGAAGTATCACTTATCAGGTTTGGGTCCAAGCTTATCAGTAATCAATC 1225
Query 1429 GTTTGACATAAGCTTCACATCCCCAAATTTTGAGAAAAGATAAATTAGGAACTTTTCCAG 1488
||||||| |||||||||| ||||||||||| |||||||| ||||||||||| ||||||
Sbjct 1224 ATTTGACACAAGCTTCACAACCCCAAATTTTCAGAAAAGACAAATTAGGAACCTTTCCAA 1165
Query 1489 TCCATATCTCATATGGTGTCTTTTCAACTGATTTTGATGGACATCTGTTTAGCATAAACG 1548
|||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct 1164 TCCATATCTCATATGGTGTCTTCTCAACTGATTTTGATGGACATCTGTTGAGCATAAACG 1105
Query 1549 CAGACGTCTCTAGAGCATATCCCCAAAAGGATATTGGAAGATCAGTGTGACTCATCATCG 1608
|||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |
Sbjct 1104 CAGACGTCTCTAGAGCATATCCCCAAAAGGATGGTGGAAGATCTGTGTGACTCATCATAG 1045
Query 1609 ATCGAACCATATCCAATAAAGTTCGATTTCTCCTTTCGGACACACCATTCCACT-GTGGT 1667
||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct 1044 ATCAAACCATATCCAATAAAGTTCGATTTCTCCTTTCGGACACACCATTCCA-TGGTGGT 986
Query 1668 GTTCCTGGAGGAGTGAGCTGTGAAACAATTCCACACTCTCTGAGATGATCACTGAAAGCT 1727
||||| ||||||||||||| |||||| |||||||| |||| ||||||||||| ||| ||
Sbjct 985 GTTCCCGGAGGAGTGAGCTCTGAAACCATTCCACA--CTCTAAGATGATCACTAAAAACT 928
Query 1728 TGGCTCAAATATTCTCCTCCACGATCTGATCGAAGAGCTTTTATTGATTTGCCAAGTTGA 1787
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 927 TGGCTCAAATATTCTCCTCCACGATCTGATCGAAGAGCTTTAATTGATTTGCCAAGTTGA 868
Query 1788 TTTTGTACTTCATTCTGGAACTCCTTGAACTTTTCAAAGGATTCCGACTTATGTTTCATT 1847
||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 867 TTTTGTACTTCATTCTGAAACTCCTTGAACTTTTCAAAGGATTCCGATTTATGTTTCATT 808
Query 1848 AGATAAACATAACCATATCTACTGAAGTCATCAGTAAATGTAATGAAGTACTGATAGTTT 1907
||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 807 AGATAAATATAATCATATCTACTGAAGTCATCAGTAAATGTAATGAAGTACTGATAGTTT 748
Query 1908 CCTCTGGCGCTTGTATTCATTGGCCCACATACATCTGTATGTATAAGGCCCAATAAATCA 1967
||||| | |||||| |||||||||||||||||| ||||||||||||||||||||| |||
Sbjct 747 CCTCTAACACTTGTACTCATTGGCCCACATACATTTGTATGTATAAGGCCCAATAAGTCA 688
Query 1968 CTAGCCCTCTCACTGTGCCCAGTAAATGGGGCCTTAGTCATTTTTCCCAACAAACAAGAT 2027
|||||||||||| |||| ||||||| || || |||||||||||| ||||||||||||||
Sbjct 687 CTAGCCCTCTCATTGTG-TCAGTAAACGGAGCTTTAGTCATTTTTTCCAACAAACAAGAT 629
Query 2028 TCACAAGTCTCATAAGATTCATAATCAAATGAGTTCAAAAGTCCATCACTATGAAGCTTT 2087
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 628 TCACATGTCTCATAAGATTCATAATCAAATGAGTTCAAAAGTCCATCACTATGAAGCTTT 569
Query 2088 TGAATGCGTTTCTCATTTATATGGCCCAAACGACAATGCCAGAGAAA-AGTTGGATTCAA 2146
|||||||||||||| ||| |||||||||||||||||||||| ||||| | ||||||||||
Sbjct 568 TGAATGCGTTTCTCGTTTTTATGGCCCAAACGACAATGCCAAAGAAACA-TTGGATTCAA 510
Query 2147 GTCATTAGACTTAAATCTCTTGGTACGAATGTTATAGACTGGCATGCTTTGGTTTAGAAC 2206
|||||||||||||||| |||||||| |||||||||||| |||||||||| |||||||| |
Sbjct 509 GTCATTAGACTTAAATTTCTTGGTATGAATGTTATAGATTGGCATGCTT-GGTTTAGACC 451
Query 2207 ATAAAGCCCATTCTTTAATGGAGCGCTACCATAAAACATATCATCTCGATCAAATGAACA 2266
||| || ||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 450 ATAGAGTCCATTCTCTAATGGAGCGCTACCATAAAACATATCATCTCAATCAAATGAACA 391
Query 2267 ACATTTGTTCTTGATCGAAAAGTGAAAACCTTCCATGTCCAAACATGAAATGGAGATGAT 2326
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 390 ACATTTGTTCTTGATCGAAAAGTGAAAACCTTCCATGTCCAAACATGAAACAGAGATGAT 331
Query 2327 ATTCTTGTTTATAGCAGGAACATAGTAGCAGTTCTTAAGCTCCAAAACCATGCCTGAAGG 2386
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 330 TTTCTTGTTTATAGCAGGAACATAGTAGCAGTTCTTAAGCTCCAAAACCATGCATGAAGG 271
Query 2387 TAAAGACAACGAATATGTTCCCACGGCTAATGCAGAAACTTTTGCTCCATTAGCCACACG 2446
|||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct 270 CAAAGACAACGAATATGTTCCCACGGCCAATGCAGAGACTTTTGCTCCATTAGCCACACG 211
Query 2447 TAGGTCCACTTGTCCTTCCTCCAAAGTTCTACTGTTGGTTAGGCCATGCACATATACACA 2506
|| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 210 TAAGTCCACTTGTCCTTCCTCCAAAGTTCTACTGTTGTTTAGGCCATGCACATATACACA 151
Query 2507 AATGTGAGCACCACAACCGGTATCCAATACCCAAGGAGTAGAACCAGAAGTAGTAACATT 2566
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 150 AATGTGAGCACCAAAACCGGTATCCAATACCCAAGGAGTAGAACCAGAAGTAGTAACATT 91
Query 2567 TACTTCTATAACATAGATACCCGAAGAAGAAATATTGAATATTTTCTTCTTCT-CCAGAT 2625
||| ||||||||||||||||||||||||||||| |||||| |||||||||| | ||||||
Sbjct 90 TACGTCTATAACATAGATACCCGAAGAAGAAATCTTGAATGTTTTCTTCTTTTTCCAGAT 31
Query 2626 CTTCCGAATT-TTCAAGAGGGTTTGATCCAT 2655
||||| || | |||| ||||||||||| |||
Sbjct 30 CTTCC-AAGTATTCAGGAGGGTTTGATGCAT 1
Score = 1354 bits (733), Expect = 0.0
Identities = 846/901 (94%), Gaps = 6/901 (1%)
Strand=Plus/Minus
Query 1 CATCTTTATAAATCTAATACCAATCGCAGCAGTATGACTCTCATGCTTAGGCTGCGGAAG 60
|||||||||||||||||| |||||||||||||||||| |||||||||| |||||| ||||
Sbjct 3162 CATCTTTATAAATCTAATGCCAATCGCAGCAGTATGAGTCTCATGCTTCGGCTGCAGAAG 3103
Query 61 AGGTTTAGTAAATA-GATCAGCAACATTTGCATCCGTTGGAACTCTGCTAATCTTCACAT 119
|||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 3102 AGGTTTAGTAAA-AGGATCAGCAACATTTGCATCCGTTGAAACTCTGCTAATCTTCACAT 3044
Query 120 CACCTCTATCAATAATCTCACGAATGAGGTGATATCGCCTTTGTATGTGTTTGGATTTCT 179
||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 3043 CACCTCTATTAATAATCTCACGAATGAGATGATATCGCCTTTGTATGTGTTTGGATTTCT 2984
Query 180 GGTGTGATCTAGGTTATTTCGCTTGA-GCGATGGCTCCATTGTTATCACAGTAAAGATCG 238
||||||||||||||| ||| || | | |||||||| ||||| |||||||||||||||||
Sbjct 2983 GGTGTGATCTAGGTTCTTTTGCCT-ACGCGATGGCACCATTATTATCACAGTAAAGATCA 2925
Query 239 ATGGGGCCAGAAATACTAGGAACCACACCAAGTTCAGTAATGAACTTCCTAATCCAAACA 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2924 ATGGGGCCAGAAATACTAGGAACCACACCAAGTTCAGTAATGAACTTCCTAATCCAAACA 2865
Query 299 GCCTCCTTAGCCGCTTCAGAAGCAGCTATATACTCAGCCTCAGTTGCAGAGTCTGCCATA 358
||||||||||||||| ||||||||||||||||||||| | ||| | ||||||||||| |
Sbjct 2864 CCCTCCTTAGCCGCTTTAGAAGCAGCTATATACTCAGCTTAAGTCGTAGAGTCTGCCACA 2805
Query 359 GTGCTCTGTTTGGAACTCTTCCAGCTCACTGCTCCTCCGTTGAGACAAAAGACAAATCCT 418
||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 2804 GTGCTCTGTTTGGAACTCTTCCAACTCACTGCTCCTCCGTTGAGATAAAAGACAAATCCA 2745
Query 419 GATTGAGATCGAAAATCATCTTTGTCTGTCTGAAAGCTGGCATCGGTATAACCACTCACA 478
||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2744 GATTGTGATCGGAAATCATCTTTGTCTGTCTGAAAGCTGGCATCAGTATAACCACTCACA 2685
Query 479 ACAAGTTCCTCACTTCCTCCATAAACCAAAAACTTATCCTTAGTTCTTTTCAAGTACTTA 538
|||||||||||||| ||| |||| |||||||||||||||||||||||| |||||||||||
Sbjct 2684 ACAAGTTCCTCACTACCTTCATAGACCAAAAACTTATCCTTAGTTCTTCTCAAGTACTTA 2625
Query 539 AGGATGTTCTTGACTACTATCCAATGACTTTCACCTGGATCAGACTGGTATCTGCTCGTC 598
||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||
Sbjct 2624 AGGATGTTCTTGACTACTATCCAGTGACCTTCACCTGGATCAGATTGGTATCTGCTCGTC 2565
Query 599 ATGCTCAAAGCACAAGCAACACCTGGGCGAGTGCAGAGCATAGCATACATGATAGATCCT 658
|||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||
Sbjct 2564 ATGCTCAAAGCACATGCAATATCTGGGCGAGTGCAGAGCATAGCATACATGATAGATCCT 2505
Query 659 ATAGCAGAAGCATATGGAATCTTACTCATCCGCTCTCGCTCATCTTGTGTCGAAGGACAC 718
|||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct 2504 ATAGCAGAAGCATATGGAATCTTACTCATCCGCTCTCGCTCATCATGCGTCGAAGGACAT 2445
Query 719 TGAGTCTTGCTAAGAGTTATGCCAT-GAGACATTGGTATAAAGCCTTTCTTAGAATCATG 777
|||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct 2444 TGAGTCTTGCTAAGAGTTATGC-ATTGAGACATTGGTATAAAGCCTTTCTTAGAATCATC 2386
Query 778 CATATTAAACCTATGCAAGACCTTATCTATATAAGTATCTTGACTTAGTCCAATTATTTT 837
|||||| ||||| |||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 2385 CATATTGAACCTGTGCAAGACCTTATCAATATAAGTATCCTGACTTAGTCCAATTATTTT 2326
Query 838 GTTCAATCTATCTCTATAGATCCTTATTCCAAGAATATAGGCAGCTTCTCCCAAGTCTTT 897
||| ||||||||||||||||| |||||||||||||||||||||||||| || | ||||||
Sbjct 2325 GTTTAATCTATCTCTATAGATTCTTATTCCAAGAATATAGGCAGCTTCGCCTATGTCTTT 2266
Query 898 C 898
|
Sbjct 2265 C 2265
> AT3G30747.1 | Symbols: | transposable element gene | chr3:12393632-12396810
FORWARD LENGTH=3179
Length=3179
Score = 1912 bits (1035), Expect = 0.0
Identities = 1264/1374 (92%), Gaps = 17/1374 (1%)
Strand=Plus/Minus
Query 895 TTTCTTCTTGAAAATCCATTTACACTCAATAGCTTTTACACCATCAGGTAAATCAACCAA 954
||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 1716 TTTCTTCTTAAAAATCCATTTACACTTTATGGCTTTTACACCATCAGGTAAATCAACCAA 1657
Query 955 AGTCCATACTTTGTTTTGTGACATGGATTCCATCTCGGATTTCGCGGCCTCTAACCACTT 1014
||| ||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 1656 AGTTCATACTTCGTTTTGTGACATGGATTCCATTTCGGATTTTGCGGCCTCTAACCACTT 1597
Query 1015 ATCGGAATCGGGGCCCATCATTGCTTCTTCGTATGACGTAGGTTCATCACTCTCTATAAT 1074
|||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||
Sbjct 1596 ATCGGAATCGGGGCCCATCAGCGCTTCTTCGTAAGACATAGGTTCATCACTCTCTATAAG 1537
Query 1075 CAATAGATTATGATCATCCATCACCTAATCTCCAAATCTATCGGGTTCGTGACGGTTCCT 1134
|||||| |||||||||| ||||| ||||||||||||||||||||||||||||| ||||
Sbjct 1536 AAATAGAGCATGATCATCCGTCACCCAATCTCCAAATCTATCGGGTTCGTGACGGCTCCT 1477
Query 1135 TTCGGACCTACGTACCTCAGGTTCCACAGGTGTAGATTCTACGACTCTTCGTAGAT-CTA 1193
|||||||||||||||||||||||||||| || ||| |||||||||||||||||||| | |
Sbjct 1476 TTCGGACCTACGTACCTCAGGTTCCACATGTATAGGTTCTACGACTCTTCGTAGATCCAA 1417
Query 1194 AC-TGATGTTCTTCCTGAGAAGTTGGAACATCCTCC-TGTGG--CTCGAACTTCTTTGAG 1249
|| | |||||||||||||||||||||||||| | || ||||| |||||||||||| |||
Sbjct 1416 ACAT-ATGTTCTTCCTGAGAAGTTGGAACAT-CACCATGTGGTTCTCGAACTTCTTCGAG 1359
Query 1250 TAACACTTTACTCCCACTAGTTCCTTTTGAAAGAAACTCCCTTTCCAAAAAGGCTCCATT 1309
||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct 1358 TAATACTTTACTCCCACTAGTTCCTTTTGAAAGAAACTCTCTTTCCAAAAAGGCACCATT 1299
Query 1310 TCGAGCAACAAACACTTTGTTGTCAGTTGGATGGTAGAAGTAATAACCTTTGGTCTCTTT 1369
||||||||||||| ||||||||||||| || ||||| ||||||||| | |||||||||||
Sbjct 1298 TCGAGCAACAAACTCTTTGTTGTCAGTAGGGTGGTAAAAGTAATAATCGTTGGTCTCTTT 1239
Query 1370 AGGATAACCTACGAAGTAGCATTTATCAGATTTTGGTCCAAGCTTATCAGTAATCAACCG 1429
|||||||||||||| ||||| |||||| |||| ||||||||||||||||||||||| ||
Sbjct 1238 TGGATAACCTACGAAATAGCACTTATCATATTTGGGTCCAAGCTTATCAGTAATCAATCG 1179
Query 1430 TTTGACATAAGCTTCACATCCCCAAATTTTGAGAAAAGATAAATTAGGAACTTTTCCAGT 1489
|||||||||||||||||| ||||||||||| |||||||| ||||||||||| ||||||||
Sbjct 1178 TTTGACATAAGCTTCACAACCCCAAATTTTCAGAAAAGACAAATTAGGAACCTTTCCAGT 1119
Query 1490 CCATATCTCATATGGTGTCTTTTCAACTGATTTTGATGGACATCTGTTTAGCATAAACGC 1549
||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||
Sbjct 1118 CCATATCTCATATGGTGTCTTCTCAACTGATTTTTATGGACATCTGTTGAGCATAAACGC 1059
Query 1550 AGACGTCTCTAGAGCATATCCCCAAAAGGAT-ATTGGAAGATCAGTGTGACTCATCATCG 1608
||| | |||| ||||||||||||||||||| | ||||||||| |||||| |||||||||
Sbjct 1058 AGATATTTCTAAAGCATATCCCCAAAAGGATGA-TGGAAGATCTGTGTGATTCATCATCG 1000
Query 1609 ATCGAACCATATCCAATAAAGTTCGATTTCTCCTTTCGGACACACCATTCCACTGTGGTG 1668
||||||||||||||||||||||| ||||||||||||| || ||||||||||| ||||||
Sbjct 999 ATCGAACCATATCCAATAAAGTTTGATTTCTCCTTTCAGATACACCATTCCATTGTGGTA 940
Query 1669 TTCCTGGAGGAGTGAGCTGTGAAACAATTCCACACTCTCTGAGATGATCACTGAAAGCTT 1728
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct 939 TTCCTGGAGGAGTGAGCTGTGAAACAATTCCACACTCTCTGAGATGATCACTAAAAACTT 880
Query 1729 GGCTCAAATATTCTCCTCCACGATCTGATCGAAGAGCTTTTATTGATTTGCCAAGTTGAT 1788
||||||||||||||||||| |||||||||||||| |||| |||||||| ||||||||||
Sbjct 879 GGCTCAAATATTCTCCTCCTTGATCTGATCGAAGAACTTTAATTGATTTCCCAAGTTGAT 820
Query 1789 TTTGTACTTCATTCTGGAACTCCTTGAACTTTTCAAAGGATTCCGACTTATGTTTCATTA 1848
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 819 TTTGTACTTCATTCTGGAACTCCTTGAACTTTTCAAAGGATTCCGATTTATGTTTCATTA 760
Query 1849 GATAAACATAACCATATCTACTGAAGTCATCAGTAAATGTAATGAAGTACTGATAGTTTC 1908
||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||
Sbjct 759 CATAAACATAACCATATCTACTAAAGTCATTAGTAAATGTAATGAAATACTGATAGTTTC 700
Query 1909 CTCTGGCGCTTGTATTCATTGGCCCACATACA-T-C-T--GTATGTATAAGGCCCAATAA 1963
|||| || ||||| || |||||||||||||| | | | |||||||||| |||||||||
Sbjct 699 CTCTAGCATTTGTACTCGTTGGCCCACATACAGTACATCTGTATGTATAAAGCCCAATAA 640
Query 1964 ATCACTAGCCCTCTCACTGTGCCCAGTAAATGGGGCCTTAGTCATTTTT-CCCAACAAAC 2022
||||||||||||||||| || || ||||||||||| |||||||||||| ||||||||||
Sbjct 639 GTCACTAGCCCTCTCACTTTGTCCGGTAAATGGGGCTTTAGTCATTTTTTCCCAACAAAC 580
Query 2023 AAGATTCACAAGTCTCATAAGATTCATAATCAAATGAGTTCAAAAGTCCATCACTATGAA 2082
|||||||| | ||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct 579 AAGATTCATATGTCTCATAAGATTCATAATCAAATGAGTTTAAAATTCCATCACTATGAA 520
Query 2083 GCTTTTGAATGCGTTTCTCATTTATATGGCCCAAACGACAATGCCAGAGAAAA-GTTGGA 2141
||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||
Sbjct 519 GCTTTTGAATGCGTTTCTCGTTTATATGGCCCAAACGACAATGCCAGA-AAAACGTTGGA 461
Query 2142 TTCAAGTCATTAGACTTAAATCTCTTGGTACGAATGTTATAGACTGGCATGCTTTGGTTT 2201
|||||| ||||||||||||||||||||||| |||||||||| | ||||||||||||||||
Sbjct 460 TTCAAGCCATTAGACTTAAATCTCTTGGTATGAATGTTATAAATTGGCATGCTTTGGTTT 401
Query 2202 AGAACATAAAGCCCATTCTTTAATGGAGCGCTACCATAAAACATATCATCTCGA 2255
|||||||| |||||||||| |||||||||||||||||||||| |||||||||||
Sbjct 400 AGAACATAGAGCCCATTCTCTAATGGAGCGCTACCATAAAACGTATCATCTCGA 347
Score = 1358 bits (735), Expect = 0.0
Identities = 846/900 (94%), Gaps = 6/900 (1%)
Strand=Plus/Minus
Query 1 CATCTTTATAAATCTAATACCAATCGCAGCAGTATGACTCTCATGCTTAGGCTGCGGAAG 60
|||||||||||||||||| |||||||||||| |||||||||||||||| ||||| |||||
Sbjct 3083 CATCTTTATAAATCTAATGCCAATCGCAGCAATATGACTCTCATGCTTCGGCTGTGGAAG 3024
Query 61 AGGTTTAGTAAATA-GATCAGCAACATTTGCATCCGTTGGAACTCTGCTAATCTTCACAT 119
||||| |||||| | |||||||||||||||||| | ||| ||||||||||||||||||||
Sbjct 3023 AGGTTAAGTAAA-AGGATCAGCAACATTTGCATTCATTGAAACTCTGCTAATCTTCACAT 2965
Query 120 CACCTCTATCAATAATCTCACGAATGAGGTGATATCGCCTTTGTATGTGTTTGGATTTCT 179
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2964 CACCTCTATCATTAATCTCACGAATGAGGTGATATCGCCTTTGTATGTGTTTGGATTTCT 2905
Query 180 GGTGTGATCTAGGTTATTTCGCTTGAGCGATGGCTCCATTGTTATCACAGTAAAGATCGA 239
||||||||||||||| ||| ||||| | ||| | ||||||||||||||||||||||| |
Sbjct 2904 GGTGTGATCTAGGTTTTTTTGCTTGCGTTATGACACCATTGTTATCACAGTAAAGATCAA 2845
Query 240 TGGGGCCAGAAATACTAGGAACCACACCAAGTTCAGTAATGAACTTCCTAATCCAAACAG 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2844 TGGGGCCAGAAATACTAGGAACCACACCAAGTTCAGTAATGAACTTCCTAATCCAAACAG 2785
Query 300 CCTCCTTAGCCGCTTCAGAAGCAGCTATATACTCAGCCTCAGTTGCAGAGTCTGCCATAG 359
||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||
Sbjct 2784 CCTCCTTAGCCGCTTCAGAAGCAGCTATATACTCAGCTTCAGTTGTAGAGTCTGCCACAG 2725
Query 360 TGCTCTGTTTGGAACTCTTCCAGCTCACTGCTCCTCCGTTGAGACAAAAGACAAATCCTG 419
|||||||||||||||||||||| |||||| |||||||||| |||||||||||||||| ||
Sbjct 2724 TGCTCTGTTTGGAACTCTTCCAACTCACTTCTCCTCCGTTTAGACAAAAGACAAATCGTG 2665
Query 420 ATTGAGATCG-AAAATCATCTTTGTCTGTCTGAAAGCTGGCATCGGTATAACCACTCACA 478
||| ||||| |||| ||||||||||||| |||||||||||||| ||| |||||||||||
Sbjct 2664 ATTTCGATCGGAAAA-CATCTTTGTCTGTTTGAAAGCTGGCATCAGTAGAACCACTCACA 2606
Query 479 ACAAGTTCCTCACTTCCTCCATAAACCAAAAACTTATCCTTAGTTCTTTTCAAGTACTTA 538
||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct 2605 ACAAGTTCCTCACTTCCTCCATAGACCAAAAACTTATCCTTAGTTCTTCTCAAGTACTTA 2546
Query 539 AGGATGTTCTTGACTACTATCCAATGACTTTCACCTGGATCAGACTGGTATCTGCTCGTC 598
|||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct 2545 AGGATGGTCTTGACTACTATCCAGTGACTTTCACCTGGATCAGATTGGTATCTGCTCGTC 2486
Query 599 ATGCTCAAAGCACAAGCAACACCTGGGCGAGTGCAGAGCATAGCATACATGATAGATCCT 658
|||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2485 ATGCTCAAAGCACATGCAACATCTGGGCGAGTGCAGAGCATAGCATACATGATAGATCCT 2426
Query 659 ATAGCAGAAGCATATGGAATCTTACTCATCCGCTCTCGCTCATCTTGTGTCGAAGGACAC 718
|||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||
Sbjct 2425 ATAGCAGAAGCATATGAAATCTTACTCATCCGCTCTCGCTCATCATGCGTCGAAGGACAC 2366
Query 719 TGAGTCTTGCTAAGAGTTATGCCATGAGACATTGGTATAAAGCCTTTCTTAGAATCATGC 778
| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct 2365 TAAGTCTTGCTAAGAGTTATACCATGAGACATTG-TATAAAGCCTTTCTTAGAATCATGC 2307
Query 779 ATATTAAACCTATGCAAGACCTTATCTATATAAGTATCTTGACTTAGTCCAATTATTTTG 838
||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2306 ATATTGAACATGTGCAAGACCTTATCTATATAAGTATCTTGACTTAGTCCAATTATTTTG 2247
Query 839 TTCAATCTATCTCTATAGATCCTTATTCCAAGAATATAGGCAGCTTCTCCCAAGTCTTTC 898
|| ||||||||||||||||| ||||| |||||||||||||||||||| |||| |||||||
Sbjct 2246 TTTAATCTATCTCTATAGATTCTTAT-CCAAGAATATAGGCAGCTTCACCCATGTCTTTC 2188
Score = 547 bits (296), Expect = 2e-154
Identities = 332/350 (95%), Gaps = 0/350 (0%)
Strand=Plus/Minus
Query 2281 TCGAAAAGTGAAAACCTTCCATGTCCAAACATGAAATGGAGATGATATTCTTGTTTATAG 2340
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct 350 TCGAAAAGTGATGACCTTCCATGTCCAAACATGAAACGGAGATGATATTCTTGTTTATTG 291
Query 2341 CAGGAACATAGTAGCAGTTCTTAAGCTCCAAAACCATGCCTGAAGGTAAAGACAACGAAT 2400
|| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 290 CAAGAACATAGTAGCAGTTCTTAACCTCCAAAACCATGCCTGAAGGCAAAGACAACGAAT 231
Query 2401 ATGTTCCCACGGCTAATGCAGAAACTTTTGCTCCATTAGCCACACGTAGGTCCACTTGTC 2460
||||||||||||| |||||||| |||||| ||||||||| ||||||||||||||||||||
Sbjct 230 ATGTTCCCACGGCCAATGCAGAGACTTTTTCTCCATTAGTCACACGTAGGTCCACTTGTC 171
Query 2461 CTTCCTCCAAAGTTCTACTGTTGGTTAGGCCATGCACATATACACAAATGTGAGCACCAC 2520
||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||
Sbjct 170 CTTCCTCCAAAGTTCTACTGTTGTTTAGGCCATGCACATTTACACAAATGTGAGCACTAC 111
Query 2521 AACCGGTATCCAATACCCAAGGAGTAGAACCAGAAGTAGTAACATTTACTTCTATAACAT 2580
|||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct 110 AACCGGTATCCAATACCCAAGGAGTAAAACCAGAAGTAGTAACATTTACATCTATAACAT 51
Query 2581 AGATACCCGAAGAAGAAATATTGAATATTTTCTTCTTCTCCAGATCTTCC 2630
||||||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct 50 AGATACCCGAAGAAGAAATCTTGAATGTTTTCTTCTTCTCCAGATCTTCC 1
> AT3G32305.1 | Symbols: | transposable element gene | chr3:13253568-13256745
REVERSE LENGTH=3178
Length=3178
Score = 1768 bits (957), Expect = 0.0
Identities = 1085/1148 (95%), Gaps = 4/1148 (0%)
Strand=Plus/Minus
Query 1520 TTTTGATGGACATCTGTTTAGCATAAACGCAGACGTCTCTAGAGCATATCCCCAAAAGGA 1579
|||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct 1194 TTTTGATGGACATCTGTTGAGCATAAACGCACACGTCTCTAGAGCATATCCCCAAAAGGA 1135
Query 1580 TATTGGAAGATCAGTGTGACTCATCATCGATCGAACCATATCCAATAAAGTTCGATTTCT 1639
| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1134 TGGTGGAAGATCTGTGTGACTCATCATAGATCGAACCATATCCAATAAAGTTCGATTTCT 1075
Query 1640 CCTTTCGGACACACCATTCCACTGTGGTGTTCCTGGAGGAGTGAGCTGTGAAACAATTCC 1699
||||| ||||||| |||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 1074 CCTTTTAGACACACTATTCCATTGTGGTGTTCCCGGAGGAGTGAGCTGTGAAACAATTCC 1015
Query 1700 ACACTCTCTGAGATGATCACTGAAAGCTTGGCTCAAATATTCTCCTCCACGATCTGATCG 1759
||||||||| ||||||| ||| ||| ||||||||||||| | ||||||||||||||||||
Sbjct 1014 ACACTCTCTAAGATGATTACTAAAAACTTGGCTCAAATAATATCCTCCACGATCTGATCG 955
Query 1760 AAGAGCTTTTATTGATTTGCCAAGTTGATTTTGTACTTCATTCTGGAACTCCTTGAACTT 1819
|||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 954 AAGAGCCTTAATTGATTTGCCAAGTTGATTTTGTACTTCATTCTGGAACTCCTTAAACTT 895
Query 1820 TTCAAAGGATTCCGACTTATGTTTCATTAGATAAACATAACCATATCTACTGAAGTCATC 1879
||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 894 TTCAAAGGATTCCGATTTATGTTTCATTAGATAAACATAACTATATCTACTGAAGTCATC 835
Query 1880 AGTAAATGTAATGAAGTACTGATAGTTTCCTCTGGCGCTTGTATTCATTGGCCCACATAC 1939
|||||||||||| ||||| |||||||||||||| || |||||| ||||||||||||||||
Sbjct 834 AGTAAATGTAATCAAGTAATGATAGTTTCCTCTAGCACTTGTACTCATTGGCCCACATAC 775
Query 1940 ATCTGTATGTATAAGGCCCAATAAATCACT-AGCCCTCTCACTGTGCCCAGTAAATGGGG 1998
||||||||||| |||||||||||| ||| | ||||||||||||||| |||||||| ||||
Sbjct 774 ATCTGTATGTACAAGGCCCAATAAGTCA-TCAGCCCTCTCACTGTGTCCAGTAAACGGGG 716
Query 1999 CCTTAGTCATTTTTCCCAACAAACAAGATTCACAAGTCTCATAAGATTCATAATCAAATG 2058
| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 715 CTTTAGTCATTTTTCCCAACAAACAAGATTCACATGTCTCATAAGATTCATAATCAAATG 656
Query 2059 AGTTCAAAAGTCCATCACTATGAAGCTTTTGAATGCGTTTCTCATTTATATGGCCCAAAC 2118
||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct 655 AGTTCAAAAGTCCATCACTATGAAGCTTTTGAATGCGTTTCTCGTTTATATGGCCCGAAC 596
Query 2119 GACAATGCCAGAGAAAAGTTGGATTCAAGTCATTAGACTTAAATCTCTTGGTACGAATGT 2178
|||| ||||||||||||||||||||||||||||||||| ||||||| || ||||||||||
Sbjct 595 GACACTGCCAGAGAAAAGTTGGATTCAAGTCATTAGACCTAAATCTTTTTGTACGAATGT 536
Query 2179 TATAGACTGGCATGCTTTGGTTTAGAACATAAAGCCCATTCTTTAATGGAGCGCTACCAT 2238
||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct 535 TATAGACTGGCATGCTTTGGTTTAGAACATAGAGCCCATTCTCTAATGGAGCGCTACCAT 476
Query 2239 AAAACATATCATCTCGATCAAATGAACAACATTTGTTCTTGATCGAAAAGTGAAAACCTT 2298
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 475 AAAATATATCATCTCGATCAAATGAACAACATTTGTTCTTGATCGAAAAATGAAAACCTT 416
Query 2299 CCATGTCCAAACATGAAATGGAGATGATATTCTTGTTTATAGCAGGAACATAGTAGCAGT 2358
|||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct 415 CCATGTCCAAACATGAAACGGAGACGATATTCTTGTTTATAGCAGGAACATAGTAGCAGT 356
Query 2359 TCTTAAGCTCCAAAACCATGCCTGAAGGTAAAGACAACGAATATGTTCCCACGGCTAATG 2418
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 355 TCTTAAGCTCCAAAACCATGCCTGAAGGTAAAGACAACGAATATGTTCCCACGGAAAATG 296
Query 2419 CAGAAACTTTTGCTCCATTAGCCACACGTAGGTCCACTTGTCCTTCCTCCAAAGTTCTAC 2478
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 295 TAGAGACTTTTGCTCCATTAGCCACACGTAGGTCCACTTGTCCTTCCTCCAAAGTTCTAT 236
Query 2479 TGTTGGTTAGGCCATGCACATATACACAAATGTGAGCACCACAACCGGTATCCAATACCC 2538
||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 235 TGTTGTTTAGGCCATGCACATTTACACAAATGTGAGCACCACAACCGGTATCCAATACCC 176
Query 2539 AAGGAGTAGAACCAGAAGTAGTAACATTTACTTCTATAACATAGATACCCGAAGAAGAAA 2598
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct 175 AAGGAGTAGAACCAGATGTAGTAACATTTACTTCTATAACATAGATACCCGAAGAAGATA 116
Query 2599 TATTGAATATTTTCTTCTTCTCCAGATCTTCCGAATT-TTCAAGAGGGTTTGATCCATTC 2657
|||||||| ||||||||||||||||||||||| || | |||| || |||||||| |||||
Sbjct 115 TATTGAATGTTTTCTTCTTCTCCAGATCTTCC-AAGTATTCAGGAAGGTTTGATTCATTC 57
Query 2658 AATTTGTC 2665
||||||||
Sbjct 56 AATTTGTC 49
Score = 1330 bits (720), Expect = 0.0
Identities = 851/912 (93%), Gaps = 17/912 (2%)
Strand=Plus/Minus
Query 1 CATCTTTATAAATCTAATACCAATCGCAGCAGTATGACTCTCATGCTT-AGGCTGCGGAA 59
|||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||
Sbjct 3178 CATCTTTATAAATCTAATGCCAATCGCAGCAGTATGACTCTCATGCTTCA-GCTGCGGAA 3120
Query 60 GAGGTTTAGTAAATA-GATCAGCAACATTTGCATCCGTTGGAACTCTGCTAATCTTCACA 118
||||| ||||||| | |||||||||||||||||||||||| |||||||||| ||||||||
Sbjct 3119 GAGGTATAGTAAA-AGGATCAGCAACATTTGCATCCGTTGAAACTCTGCTAGTCTTCACA 3061
Query 119 TCACCTCTATCAATAATCTCACGAATGAGGTGATATCGCCTTTGTATGTGTTTGGATTTC 178
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 3060 TCACCTCTATCAATAATCTCACGAATGAGGTGATATTGCCTTTGTATGTGTTTGGATTTC 3001
Query 179 TGGTGTGATCTAGGTTATTTCGCTTGAGCGATGGCTCCATTGTTATCACAGTAAAGATCG 238
|||||||||||||||| ||| ||||| || ||||| |||||||||||||||||||||||
Sbjct 3000 TGGTGTGATCTAGGTTCTTTTGCTTGCGCCATGGCACCATTGTTATCACAGTAAAGATCA 2941
Query 239 ATGGGGCCAGAAATACTAGGAACCACACCAAGTTCAGTAATGAACTTCCTAATCCAAACA 298
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2940 ATGGGGTCAGAAATACTAGGAACCACACCAAGTTCAGTAATGAACTTCCTAATCCAAACA 2881
Query 299 GCCTCCTTAGCCGCTTCAGAAGCAGCTATATACTCAGCCTCAGTTGCAGAGTCTGCCATA 358
|||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||
Sbjct 2880 GCCTCCTTAGCCGCTTCAGAAGCAGCTATATACTCAGCTTCAATTGTAGAGTCTGCCATA 2821
Query 359 GTGCTCTGTTTGG---------AA--CTCTTCCAGCTCACTGCTCCTCCGTTGAGACAAA 407
||||||||||||| || |||||||| |||||||||||| ||||| ||||||
Sbjct 2820 GTGCTCTGTTTGGAACTCTTCCAACTCTCTTCCAACTCACTGCTCCTTCGTTGGGACAAA 2761
Query 408 AGACAAATCCTGATTGAGATCGA-AAATCATCTTTGTCTGTCTGAAAGCTGGCATCGGTA 466
||||||||||||||||||||| | |||||||||||||||||||||| | ||||||| |||
Sbjct 2760 AGACAAATCCTGATTGAGATC-AGAAATCATCTTTGTCTGTCTGAACGATGGCATCAGTA 2702
Query 467 TAACCACTCACAACAAGTTCCTCACTTCCTCCATAAACCAAAAACTTATCCTTAGTTCTT 526
||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||
Sbjct 2701 TAACCACTCACAACAAGTTCCTCTCTTCCTCCATAGACCAAAAACTTATCCTTCGTTCTT 2642
Query 527 TTCAAGTACTTAAGGATGTTCTTGACTACTATCCAATGACTTTCACCTGGATCAGACTGG 586
|||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||
Sbjct 2641 CTCAAGTACTTAAGGATGTTCTTGACTACTATCTAGTGACTTTCACCTGGATCAGATTGG 2582
Query 587 TATCTGCTCGTCATGCTCAAAGCACAAGCAACACCTGGGCGAGTGCAGAGCATAGCATAC 646
|||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||
Sbjct 2581 TATCTGCTCGTCATGCTCAAAGCACATGCAACATCTGGGCGAGTCCAGAGCATAGCATAC 2522
Query 647 ATGATAGATCCTATAGCAGAAGCATATGGAATCTTACTCATCCGCTCTCGCTCATCTTGT 706
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2521 ATGATAGATCCTATAGCAGAAGCATATGGAATCTTACTCATCCGCTCTCGCTCATCATGC 2462
Query 707 GTCGAAGGACACTGAGTCTTGCTAAGAGTTATGCCATGAGACATTGGTATAAAGCCTTTC 766
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2461 GTCGAAGGACACTGAGTCTTGCTAAGAGTTATGCCATGAGACATTGGTATTAAGCCTTTC 2402
Query 767 TTAGAATCATGCATATTAAACCTATGCAAGACCTTATCTATATAAGTATCTTGACTTAGT 826
||||||||||||||||| ||||| |||||||||||||| ||||||||||| |||||||||
Sbjct 2401 TTAGAATCATGCATATTGAACCTGTGCAAGACCTTATCAATATAAGTATCCTGACTTAGT 2342
Query 827 CCAATTATTTTGTTCAATCTATCTCTATAGATCCTTATTCCAAGAATATAGGCAGCTTCT 886
|||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct 2341 CCAATTATTTTGTTTAATCTATCTTTATAGATTCTTATTCCAAGAATATAGGCAGCTTCA 2282
Query 887 CCCAAGTCTTTC 898
| || |||||||
Sbjct 2281 CGCATGTCTTTC 2270
Score = 832 bits (450), Expect = 0.0
Identities = 548/595 (92%), Gaps = 8/595 (1%)
Strand=Plus/Minus
Query 895 TTTCTTCTTGAAAATCCATTTACACTCAATAGCTTTTACACCATCAGGTAAATCAACCAA 954
|||||||||||| | |||||||||||| || |||||||||||||||||||||||||||||
Sbjct 1782 TTTCTTCTTGAATAGCCATTTACACTCTATGGCTTTTACACCATCAGGTAAATCAACCAA 1723
Query 955 AGTCCATACTTTGTTTTGTGACATGGATTCCATCTCGGATTTCGCGGCCTCTAACCACTT 1014
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct 1722 AGTCCATACTTTGTTTTGTGACATGGATTCCATTTCGGATTTCGCGGCCTCTAACCAATT 1663
Query 1015 ATCGGAATCGGGGCCCATCATTGCTTCTTCGTATGACGTAGGTTCATCACTCTCTATAAT 1074
|||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||
Sbjct 1662 ATCGGAATCGGGGCCCATCAGTGCTTCTTCGTATGACGTAGGTTCATGACTTTCTATAAT 1603
Query 1075 CAATAGATTATGATCATCCATCACCTAATCTCCAAATCTATCGGGTTCGTGACGGTTCCT 1134
|||| | |||||||||||||||| |||||| ||||||||||||||||||| | ||||
Sbjct 1602 AAATATAGCATGATCATCCATCACCCAATCTCTGAATCTATCGGGTTCGTGACAGCTCCT 1543
Query 1135 TTCGGACCTACGTACCTCAGGTTCCACAGGTGTAGATTCTACGACTCTTCGTAGATCTAA 1194
||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||
Sbjct 1542 TTCGGACCTACGTACCTCAGGTTCCACAGGTATAGGTTCTACGACTCTTCGTAGATCCAA 1483
Query 1195 CTGATGTTCTTCCTGAGAAGTTGGAACATC-CTCCTGTGG--CTCGAACTTCTTTGAGTA 1251
|| ||||||||||||||||||||||||||| | ||||||| |||||||||||| |||||
Sbjct 1482 CTCATGTTCTTCCTGAGAAGTTGGAACATCAC-CCTGTGGTTCTCGAACTTCTTCGAGTA 1424
Query 1252 ACACTTTACTCCCACTAGTTCCTTTTGAAAGAAACTCCCTTTCCAAAAAGGCTCCATTTC 1311
| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct 1423 ATACTTTACTCCCACTAGTTCCTTTTGAAAGAAACTCTCTTTCCAAAAAGGCACCATTTC 1364
Query 1312 GAGCAACAAACACTTTGTTGTCAGTT-GGATGGTAGAAGTAATAACCTTTGGTCTCTTTA 1370
||||||||||||||||||||||| || || ||||| |||||||||| ||||||||||||
Sbjct 1363 GAGCAACAAACACTTTGTTGTCAATTAGG-TGGTAAAAGTAATAACTTTTGGTCTCTTTC 1305
Query 1371 GGATAACCTACGAAGTAGCATTTATCAGATTTTGGTCCAAGCTTATCAGTAATCAACCGT 1430
|||||||||||||||||||| |||||| |||| ||||||||||||||||||||||| |||
Sbjct 1304 GGATAACCTACGAAGTAGCACTTATCATATTTGGGTCCAAGCTTATCAGTAATCAATCGT 1245
Query 1431 TTGACATAAGCTTCACATCCCCAAATTTTGAGAAAAGATAAATTAGGAAC-TTTT 1484
|||||||||||||| | ||| ||||||| |||||||| ||||||||||| ||||
Sbjct 1244 CTGACATAAGCTTCAAAACCC-AAATTTTCAGAAAAGACAAATTAGGAACCTTTT 1191
> AT3G42182.1 | Symbols: | transposable element gene | chr3:14352785-14356741
REVERSE LENGTH=3957
Length=3957
Score = 1297 bits (702), Expect = 0.0
Identities = 850/922 (92%), Gaps = 8/922 (1%)
Strand=Plus/Minus
Query 1747 CACGATCTGATCGAAGAGCTTTTATTGATTTGCCAAGTTGATTTTGTACTTCATTCTGGA 1806
|||||||| ||||| ||||||| ||||||||||||||||||||||||| |||||| ||||
Sbjct 1795 CACGATCTCATCGACGAGCTTTAATTGATTTGCCAAGTTGATTTTGTATTTCATTTTGGA 1736
Query 1807 ACTCCTTGAACTTTTCAAAGGATTCCGACTTATGTTTCATTA-GATAAACATAACCATAT 1865
||| ||||||||||||||||||||| || ||| |||||| || |||||||||||||||||
Sbjct 1735 ACT-CTTGAACTTTTCAAAGGATTCAGATTTACGTTTCA-TAGGATAAACATAACCATAT 1678
Query 1866 CTACTGAAGTCATCAGTAAATGTAATGAAGTACTGATAGTTTCCTCTGGCGCTTGTATTC 1925
|||||||||||||||||||||||||||||||| |||||||||||||| || ||||| ||
Sbjct 1677 CTACTGAAGTCATCAGTAAATGTAATGAAGTATTGATAGTTTCCTCTAGCACTTGTCGTC 1618
Query 1926 ATTGGCCCACATACATCTGTATGTATAAGGCCCAATAAATCACTAGCCCTCTCACTGTGC 1985
||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 1617 ATTGGCCCATATACATCTGTATGTATAAGGCCCAATAAGTCACTAGCCCTTTCACTGTGT 1558
Query 1986 CCAGTAAATGGGGCCTTAGTCATTTTTCCCAACAAACAAGATTCACAAGTCTCATAAGAT 2045
|||||||| ||||| |||||||||||||||||||||||||||||||| || |||||| ||
Sbjct 1557 CCAGTAAACGGGGCTTTAGTCATTTTTCCCAACAAACAAGATTCACATGTTTCATAAAAT 1498
Query 2046 TCATAATCAAATGAGTTCAAAAGTCCATCACTATGAAGCTTTTGAATGCGTTTCTCATTT 2105
||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||| |||
Sbjct 1497 TCATAATCAGTTGAGTTCAAAAGTTCATTACTATGAAGCTTTTGAATGCGTTTCTCGTTT 1438
Query 2106 ATATGGCCCAAACGACAATGCCAGAGAAAAGTTGGATTCAAGTCATTAGACTTAAATCTC 2165
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1437 ATATGGCCCAAACGACAATGCCAGAGAAACGTTGGATTCAAGTCATTAGACTTAAATCTC 1378
Query 2166 TTGGTACGAATGTTATAGACTGGCATGCTTTGGTTTAGAACATAAAGCCCATTCTTTAAT 2225
||| ||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||
Sbjct 1377 TTGTTACGAATGTTATAGATTGGCATGCTTTGGTTTAGAACATATAGCCCATTCTCTAAT 1318
Query 2226 GGAGCGCTACCATAAAACATATCATCTCGATCAAATGAACAACATTTGTTCTTGATCGAA 2285
|| ||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||
Sbjct 1317 AGAACGCTACCATAAAACATATCATCTCGCTCAAATGAACAACATTTGTTTTTGATCAAA 1258
Query 2286 AAGTGAAAACCTTCCATGTCCAAACATGAAATGGAGATGATATTCTTGTTTATAGCAGGA 2345
|||||||||||||| | |||||||||||||| ||||||||||||||||||| |||| ||
Sbjct 1257 AAGTGAAAACCTTCAA-GTCCAAACATGAAACAGAGATGATATTCTTGTTTAAAGCAAGA 1199
Query 2346 ACATAGTAGCAGTTCTTAAGCTCCAAAACCATGCCTGAAGGTAAAGACAACGAATATGTT 2405
||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 1198 ACATAGTAGCAGTTCTTGAGCTCCAAAACTATGCCTGAAGGTAAAGACAACGACTATGTT 1139
Query 2406 CCCACGG-CTAATGCAGAAACTTTTGCTCCATTAGCCACACGTAGGTCCACTTGTCCTTC 2464
||||||| | |||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1138 CCCACGGGC-AATGTAGAGACTTTTGCTCCATTAGCCACACGTAGGTCCACTTGTCCTTT 1080
Query 2465 CTCCAAAGTTCTACTGTTGGTTAGGCCATGCACATATACACAAATGTGAGCACCACAACC 2524
||| ||||||||| ||||| ||||||||||| ||| ||||||||||||||||||||||
Sbjct 1079 CTCAAAAGTTCTAGTGTTGTTTAGGCCATGCGCATTTACACAAATGTGAGCACCACAAAT 1020
Query 2525 GGTATCCAATACCCAAGGAGTAGAACCAGAAGTAGTAACATTTACTTCTATAACATAGAT 2584
|||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct 1019 GGTATCCAATACCCAAGGAGTAGAACCAAAAGTAGTAACATTGACTTCTATAACATAGAT 960
Query 2585 ACCCGAAGAAGAAATATTGAATATTTTCTTCTTCTCCAGATCTTCCGAATT-TTCAAGAG 2643
|| ||||||| | ||||||||||||||||||||||| ||||||||| || | |||| |||
Sbjct 959 ACTCGAAGAATATATATTGAATATTTTCTTCTTCTCTAGATCTTCC-AAGTGTTCAGGAG 901
Query 2644 GGTTTGATCCATTCAATTTGTC 2665
||||||||| ||||||||||||
Sbjct 900 GGTTTGATCTATTCAATTTGTC 879
Score = 1074 bits (581), Expect = 0.0
Identities = 750/830 (90%), Gaps = 18/830 (2%)
Strand=Plus/Minus
Query 895 TTTCTTCTTGAAAATCCATTTACACTCAATAGCTTTTACACCATCAGGTAAATCAACCAA 954
|||||||||||||||| |||||||||| || |||||| ||| ||||||||||||||||||
Sbjct 2609 TTTCTTCTTGAAAATCTATTTACACTCTATGGCTTTT-CACAATCAGGTAAATCAACCAA 2551
Query 955 AGTCCATACTTTGTTTTGTGACATGGATTCCATCTCGGATTTCGCGGCCTCTAACCACTT 1014
|||||||| |||||||||||||||||||||||| ||| ||||||||| |||| ||
Sbjct 2550 AGTCCATATTTTGTTTTGTGACATGGATTCCATTTCGTATTTCGCGG-----AACCTGTT 2496
Query 1015 ATCGGAATCGGGGCCCATCATTGCTTCTTCGTATGACGTAGGTTCATCACTCTCTATAAT 1074
| |||||| |||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct 2495 TTAGGAATCAGGGCCCATCAGCGCTTCTTCGTATGATGTAGGTTCATCACTCTCTATAAT 2436
Query 1075 CAATAGATTATGATCATCCATCA-CCTAATCTCCAAATCTATCGGGTTCGTGACGGTTCC 1133
||||||| |||||||||||||| || |||||||||||||||||||||||||| || |||
Sbjct 2435 AAATAGATCATGATCATCCATCATCC-AATCTCCAAATCTATCGGGTTCGTGATGGCTCC 2377
Query 1134 TTTCGGACCTACGTACCTCAGGTTCCACAGGTGTAGATTCTACGACTCTTCGTAGATCTA 1193
||| ||||||||||||||||||||||||| || || ||||||||||||||||||||| |
Sbjct 2376 TTTTGGACCTACGTACCTCAGGTTCCACAAGTAAAGGTTCTACGACTCTTCGTAGATCCA 2317
Query 1194 ACTGATGTTCTTCCTGAGAAGTTGGAACATCCTCC-TGTGG--CTCGAACTTCTTTGAGT 1250
|||||||||| ||||||||| ||||||||| | || ||||| || |||||||||||||
Sbjct 2316 ACTGATGTTCATCCTGAGAATTTGGAACAT-CACCATGTGGTTATCAAACTTCTTTGAGT 2258
Query 1251 AACACTTTACTCCCACTAGTTCCTTTTGAAAGAAACTCCCTTTCCAAAAAGGCTCCATTT 1310
|| ||||||||||||| |||| |||||||||||||||| ||||||||||| || ||||||
Sbjct 2257 AATACTTTACTCCCACAAGTTTCTTTTGAAAGAAACTCTCTTTCCAAAAAAGCACCATTT 2198
Query 1311 CGAGCAACAAACACTTTGTTGTCAGTTGGATGGTAGAAGTAATAACCTTTGGTCTCTTTA 1370
| |||||||||||||||||||||||| || ||||| |||||||||||||||||||||||
Sbjct 2197 CAAGCAACAAACACTTTGTTGTCAGTAGGGTGGTAAAAGTAATAACCTTTGGTCTCTTTC 2138
Query 1371 GGATAACCTACG-AAGTAGCATTTATCAGATTTTGGTCCAAGCTTATCAGTAATCAACCG 1429
|||||||||||| || || || |||||| |||| ||||||||||||||||||||||| ||
Sbjct 2137 GGATAACCTACGTAA-TAACACTTATCACATTTGGGTCCAAGCTTATCAGTAATCAATCG 2079
Query 1430 TTTGACATAAGCTTCACATCCCCAAATTTTGAGAAAAGATAAATTAGGAACTTTTCCAGT 1489
|||||||||||||||||| ||||||||||| |||||||| ||||||||||| ||||||||
Sbjct 2078 TTTGACATAAGCTTCACAACCCCAAATTTTCAGAAAAGACAAATTAGGAACCTTTCCAGT 2019
Query 1490 CCATATCTCATATGGTGTCTTTTCAACTGATTTTGATGGACATCTGTTTAGCATAAACGC 1549
||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct 2018 CCATATCTCATATGGTGTCTTCTCAACTGATTTTGATGGACATCTGTTGAGCATAAACGG 1959
Query 1550 AGACGTCTCTAGAGCATATCCCCAAAAGGATATTGGAAGATCAGTGTGACTCATCATCGA 1609
|||||| ||||||||||||||||||||| || |||||||| ||||||||| |||||||
Sbjct 1958 AGACGTTTCTAGAGCATATCCCCAAAAG-AT---GGAAGATCTGTGTGACTCTTCATCGA 1903
Query 1610 TCGAACCATATCCAATAAAGTTCGATTTCTCCTTTCGGACACACCATTCCACTGTGGTGT 1669
|||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||
Sbjct 1902 TCGAACCATATCCAATAAAGTTTGATTTCTCCTTTCAGACACACCATTCCATTGTGGTGT 1843
Query 1670 TCCTGGAGGAGTGAGCTGTGAAACAATTCCACACTCTCTGAGATGATCAC 1719
||| ||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct 1842 TCCCGGAGGCGTGAGCTGTGAAACAATTCTACACTCTCTGAGATGATCAC 1793
Score = 900 bits (487), Expect = 0.0
Identities = 579/624 (93%), Gaps = 4/624 (1%)
Strand=Plus/Minus
Query 262 CACACCAAGTTCAGTAATGAACTTCCTAATCCAAACAGCCTCCTTAGCCGCTTCAGAAGC 321
|||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct 3741 CACACCAAGTTCAGTAATGAACTTCCTAATCCAAACAGCCTCCTTACCCGCTTCTGAAGC 3682
Query 322 AGCTATATACTCAGCCTCAGTTGCAGAGTCTGCCATAGTGCTCTGTTTGGAACTCTTCCA 381
||||||||||||| | | ||||| ||||||||||| | |||| |||||||||||||||||
Sbjct 3681 AGCTATATACTCAACTTTAGTTGTAGAGTCTGCCACAATGCTTTGTTTGGAACTCTTCCA 3622
Query 382 GCTCACTGCTCCTCCGTTGAGACAAAAGACAAATCCTGATTGAGATCGAAAATCATCTTT 441
|||| ||||||||| |||||||||||||||||||| ||| ||||| |||||||||||
Sbjct 3621 ACTCATTGCTCCTCCTTTGAGACAAAAGACAAATCCAAATTCTGATCGGAAATCATCTTT 3562
Query 442 GTCTGTCTGAAAGCTGGCATCGGTATAACCACTCACAACAAGTTCCTCACTTCCTCCATA 501
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 3561 GTCTGTCTGAAAGCTGGCATCAGTATAACCACTCACAACAAGTTCCTCACTTCCTCCATA 3502
Query 502 AACCAAAAACTTATCCTTAGTTCTTTTCAAGTACTTAAGGATGTTCTTGACTACTATCCA 561
|||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct 3501 GACCAAAAACTTATCCTTAGTTCTTCTCAAGTACTTAATGATGTTCTTGACTACTATCCA 3442
Query 562 ATGACTTTCACCTGGATCAGACTGGTATCTGCTCGTCATGCTCAAAGCACAAGCAACACC 621
||||||||||||||||| ||| ||||||| | ||||||||||||||||||| |||||| |
Sbjct 3441 ATGACTTTCACCTGGATGAGATTGGTATCAGATCGTCATGCTCAAAGCACATGCAACATC 3382
Query 622 TGGGCGAGTGCAGAGCATAGCATACATGATAGATCCTATAGCAGAAGCATATGGAATCTT 681
| ||||| | ||||||| ||||||||||||||||||||| |||||||||||| |||||
Sbjct 3381 TAGGCGA-T---GAGCATAACATACATGATAGATCCTATAGTAGAAGCATATGGTATCTT 3326
Query 682 ACTCATCCGCTCTCGCTCATCTTGTGTCGAAGGACACTGAGTCTTGCTAAGAGTTATGCC 741
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 3325 ACTCATCCGCTCTCGCTCATCATGTGTCGAAGGACACTGAGTCTTGCTAAGAGTTATGCC 3266
Query 742 ATGAGACATTGGTATAAAGCCTTTCTTAGAATCATGCATATTAAACCTATGCAAGACCTT 801
||||||||||||||||||| |||||||||||||||||||||| ||||| || ||||||||
Sbjct 3265 ATGAGACATTGGTATAAAGTCTTTCTTAGAATCATGCATATTGAACCTGTGTAAGACCTT 3206
Query 802 ATCTATATAAGTATCTTGACTTAGTCCAATTATTTTGTTCAATCTATCTCTATAGATCCT 861
||||||||||||||| |||||||||| |||||||||||| |||||||||||||| || ||
Sbjct 3205 ATCTATATAAGTATCCTGACTTAGTCTAATTATTTTGTTTAATCTATCTCTATAAATTCT 3146
Query 862 TATTCCAAGAATATAGGCAGCTTC 885
||||||||||||||||||||||||
Sbjct 3145 TATTCCAAGAATATAGGCAGCTTC 3122
> AT4G08094.1 | Symbols: | transposable element gene | chr4:4993175-4994696
REVERSE LENGTH=1522
Length=1522
Score = 1247 bits (675), Expect = 0.0
Identities = 824/896 (92%), Gaps = 10/896 (1%)
Strand=Plus/Minus
Query 7 TATAAATCTAATACCAATCGCAGCAGTATGACTCTCATGCTTAGGCTGCGGAAGAGGTTT 66
|||||||||||| ||||||||| ||||||||||||||||||| ||||| | |||||||||
Sbjct 1522 TATAAATCTAATGCCAATCGCAACAGTATGACTCTCATGCTTTGGCTGTGTAAGAGGTTT 1463
Query 67 AGTAAATA-GATCAGCAACATTTGCATCCGTTGGAACTCTGCTAATCTTCACATCACCTC 125
||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1462 GGTAAA-AGGATCAGCAACATTTGCATCCGTTGAAACTCTGCTAATCTTCACATCACCTC 1404
Query 126 TATCAATAATCTCACGAATGAGGTGATATCGCCTTTGTATGTGTTTGGATTTCTGGTGTG 185
||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct 1403 TATCAATAATCTCACAAATGAGGTGATATCGCCTTTGAATGTGTTTGGAATTCTGGTGTG 1344
Query 186 ATCTAGGTTATTTCGCTTGAGCGATGGCTCCATTGTTATCACAGTAAAGATCGATGGGGC 245
||| ||||| ||| || || |||||||| ||||||||||||||||||||||| |||||||
Sbjct 1343 ATCCAGGTTCTTTTGCGTGCGCGATGGCACCATTGTTATCACAGTAAAGATCAATGGGGC 1284
Query 246 CAGAAATACTAGGAACCACACCAAGTTCAGTAATGAACTTCCTAATCCAAACAGCCTCCT 305
| ||||||||||||||||||| |||||||||||||||||||||| |||||||| | || |
Sbjct 1283 CTGAAATACTAGGAACCACACAAAGTTCAGTAATGAACTTCCTATTCCAAACAACTTCAT 1224
Query 306 TAGCCGCTTCAGAAGCAGCTATATACTCAGCCTCAGTTGCAGAGTCTGCCATAGTGCTCT 365
|| |||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||
Sbjct 1223 TACCCGCTTCAGAAGCAGCTATATACTCAGCTTCAGTTGTAGAGTCTGCCACAGTGCTCT 1164
Query 366 GTTTGGAACTCTTCCAGCTCACTGCTCCTCCGTTGAGACAAAAGACAAATCCTGATTGAG 425
|||||||||||||| | ||||||||||||| ||||||||||||||||||||| ||||| |
Sbjct 1163 GTTTGGAACTCTTCTAACTCACTGCTCCTCAGTTGAGACAAAAGACAAATCCCGATTGTG 1104
Query 426 ATCGAAAATCATCTTTGTCTGTCT-GAAAGCTGGCATCGGTATAACCACTCACAACAAGT 484
|||| |||||||||||||| || | ||||| ||||||| |||| ||||||||||||||||
Sbjct 1103 ATCGGAAATCATCTTTGTCAGT-TGGAAAGTTGGCATCAGTATTACCACTCACAACAAGT 1045
Query 485 TCCTCACTTCCTCCATAAACCAAAAACTTATCCTTAGTTCTTTTCAAGTACTTAAGGATG 544
||||||||||||||||| || ||||||||||||||||||||| |||||||||||| |||
Sbjct 1044 TCCTCACTTCCTCCATAGACAAAAAACTTATCCTTAGTTCTTCTCAAGTACTTAAAAATG 985
Query 545 TTCTTGACTACTATCCAATGACTTTCACCTGGATCAGACTGGTATCTGCTCGTCATGCTC 604
||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||| |
Sbjct 984 TTCTTGACTACTATCCAGTGACTTTCACCTGGATCAGATTGGTATTTGCTCGTCATG--C 927
Query 605 AAAGCACAAGCAACA-CCTGGGCGAGTGCAGAGCA-TAGCATACATGATAGATCCTATAG 662
|||||||| |||||| || |||||||||| || | ||||||||||||||||||||||||
Sbjct 926 AAAGCACATGCAACAGCC-AGGCGAGTGCAAAG-ATTAGCATACATGATAGATCCTATAG 869
Query 663 CAGAAGCATATGGAATCTTACTCATCCGCTCTCGCTCATCTTGTGTCGAAGGACACTGAG 722
|||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||
Sbjct 868 CAGAAGCATATGGAATCTTACTCATCCGCTCTCGCTCATCATGCGTCGAAGGATACTGAG 809
Query 723 TCTTGCTAAGAGTTATGCCATGAGACATTGGTATAAAGCCTTTCTTAGAATCATGCATAT 782
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 808 TCTTGCTAAGAGTTATGCCATGAGACATTGGTATAAAGCCTTTCTTAGAATCATTCATAT 749
Query 783 TAAACCTATGCAAGACCTTATCTATATAAGTATCTTGACTTAGTCCAATTATTTTGTTCA 842
||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 748 CGAACATGTGCAAGACCTTATCTATATAAGTATCTTGACTTAGTCCAATTATTTTGTTTA 689
Query 843 ATCTATCTCTATAGATCCTTATTCCAAGAATATAGGCAGCTTCTCCCAAGTCTTTC 898
|||||||||||||||| |||||||||||||||| | ||||||| |||| |||||||
Sbjct 688 ATCTATCTCTATAGATTCTTATTCCAAGAATATTGACAGCTTCACCCATGTCTTTC 633
Score = 167 bits (90), Expect = 6e-40
Identities = 112/123 (91%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 895 TTTCTTCTTGAAAATCCATTTACACTCAATAGCTTTTACACCATCAGGTAAATCAACCAA 954
|||||||||||| || |||||||| || || |||||||| |||||| |||||||||| ||
Sbjct 123 TTTCTTCTTGAATATACATTTACATTCTATGGCTTTTACGCCATCAAGTAAATCAACAAA 64
Query 955 AGTCCATACTTTGTTTTGTGACATGGATTCCATCTCGGATTTCGCGGCCTCTAACCACTT 1014
||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||
Sbjct 63 AGTCCATACTTTGTTTTGTGACATGGATTCCATTTCGGATTTTGCGGCCTCTAAGCACTT 4
Query 1015 ATC 1017
|||
Sbjct 3 ATC 1
> AT4G07862.1 | Symbols: | transposable element gene | chr4:4688082-4688791
REVERSE LENGTH=710
Length=710
Score = 937 bits (507), Expect = 0.0
Identities = 604/651 (93%), Gaps = 5/651 (1%)
Strand=Plus/Minus
Query 2016 AACAAACAAGATTCACAAGTCTCATAAGATTCATAATCAAATGAGTTCAAAAGTCCATCA 2075
|||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 691 AACAAACAAGATGCACATGTCTCATAAGATTCATAATCAAATGAGTTCAAAAGTCCATCA 632
Query 2076 CTATGAAGCTTTTGAATGCGTTTCTCATTTATATGGCCCAAACGACAATGCCAGAGAAAA 2135
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct 631 CTATGAAGCTTTTGAATGTGTTTCTCATTTATATGGCCCAAACGACAATGC-AGAGAAAA 573
Query 2136 GTTGGATTCAAGTCATTAGACTTAAATCTCTTGGTACGAATGTTATAGACTGGCATGCTT 2195
||||||||||||| |||| |||||||||||||||| | ||||||||||| ||||||||||
Sbjct 572 GTTGGATTCAAGTGATTAAACTTAAATCTCTTGGTGCAAATGTTATAGATTGGCATGCTT 513
Query 2196 TGGTTTAGAACATAAAGCCCATTCTTTAATGGAGCGCTACCATAAAACATATCATCTCGA 2255
|||||||||||||| ||| |||||| ||||||||| ||||||||||||||||||| ||||
Sbjct 512 TGGTTTAGAACATAGAGCTCATTCTCTAATGGAGCACTACCATAAAACATATCATTTCGA 453
Query 2256 TCAAATGAACAACATTTGTTCTTGATCGAAAAGTGAAAACCTTCCATGTCCAAACATGAA 2315
||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct 452 TCAAATGAACAACATTTGTTCTTGATCAAAAAGTGAAAACTTTCCATGTCCAAACATGAA 393
Query 2316 ATGGAGATGATATTCTTGTTTATAGCAGGAACATAGTAGCAGTTCTTAAGCTCCAAAACC 2375
| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 392 ACGGAGATGATATTCTTGTTTATAGCATGAACATAGTAGCAGTTCTTAAGCTCCAAAACC 333
Query 2376 ATGCCTGAAGGTAAAGACAACGAATATGTTCCCACGGCTAATGCAGAAACTTTTGCTCCA 2435
|||| ||||||| ||||||| |||||||| || ||| | |||| ||| ||| ||||||||
Sbjct 332 ATGCATGAAGGTTAAGACAAGGAATATGT-CC-ACGACCAATGTAGAGACTCTTGCTCCA 275
Query 2436 TTAGCCACACGTAGGTCCACTTGTCCTTCCTCCAAAGTTCTACTGTTGGTTAGGCCATGC 2495
||||||| ||||||||||||||||| |||||||| |||| |||||||| ||| |||||||
Sbjct 274 TTAGCCATACGTAGGTCCACTTGTCGTTCCTCCATAGTTATACTGTTGTTTACGCCATGC 215
Query 2496 ACATATACACAAATGTGAGCACCACAACCGGTATCCAATACCCAAGGAGTAGAACCAGAA 2555
| || ||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||
Sbjct 214 ATATTTACACAAATGTGAGCACCACAGCCGGTATCCAATTCCCAAGGAGTAAAACCAGAA 155
Query 2556 GTAGTAACATTTACTTCTATAACATAGATACCCGAAGAAGAAATATTGAATATTTTCTTC 2615
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||
Sbjct 154 GTAGTAACATTTACTTCTATAACATAGATACCCGAAGAAGAAATCTTGAACGTTTTATTC 95
Query 2616 TTCTCCAGATCTTCCGAATT-TTCAAGAGGGTTTGATCCATTCAATTTGTC 2665
||||||||||||||| || | |||||| |||||||||||||||||||||||
Sbjct 94 TTCTCCAGATCTTCC-AAGTGTTCAAGGGGGTTTGATCCATTCAATTTGTC 45
> AT4G02317.1 | Symbols: | transposable element gene | chr4:1021318-1021717
REVERSE LENGTH=400
Length=400
Score = 313 bits (169), Expect = 7e-84
Identities = 319/386 (83%), Gaps = 31/386 (8%)
Strand=Plus/Minus
Query 1306 CATTTCGAGCAACAAACACTTTGTTGTCAGTTGGATGGTAGAAGTAATAACCTT-TGGTC 1364
||||||||||||||||||||||||||||||| |||| ||| ||||||||| || ||||
Sbjct 362 CATTTCGAGCAACAAACACTTTGTTGTCAGTAGGATAGTAAAAGTAATAAT-TTGTGGTT 304
Query 1365 TCTTTAGGATAACCTACGAAGTAGCATTTATCAGATTTTGGTCCAAGCTTATCAGTAATC 1424
|| ||| ||||||||| ||||||||||||||||||||| |||||||| ||||||||||||
Sbjct 303 TCCTTATGATAACCTATGAAGTAGCATTTATCAGATTTGGGTCCAAGATTATCAGTAATC 244
Query 1425 AACCGTTTGACATAAGCTTCACA-TCCCCAAATTTTGAGAAAAGATAAATTAGGAACTTT 1483
|| ||||||||||||| |||||| |||| ||||||| |||||||| |||||| ||||
Sbjct 243 AATCGTTTGACATAAGATTCACAATCCC-AAATTTTCAGAAAAGACAAATTATGAAC--- 188
Query 1484 TCCAGTCCATATCTCATATGGTGTCTTTTCAACTGATTTTGATGGACATCTGTTTAGCAT 1543
| | | | ||| | | | | | |||||||| |||||||| |||||||||
Sbjct 187 -C---T---T-T-TCA-A-G-T--CG----A-CTGATTTTAATGGACATATGTTTAGCAG 147
Query 1544 AAACGCAGACGTCTCTAGAGCATATCCCCAAAAGGATATTGGAAGATCAGTGTGACTCAT 1603
||||| |||||||||||||| |||||| |||||||||| | ||||||||||| || | ||
Sbjct 146 AAACGTAGACGTCTCTAGAGTATATCCTCAAAAGGATAATAGAAGATCAGTGAGATTTAT 87
Query 1604 CATCGATCGAA-CCATATCCAATAAAGTTCGATTTCTCCTTTCGGACACACCATTCCACT 1662
|||| ||| || ||||||||||||||||| |||||||| |||| ||||| |||| | |
Sbjct 86 CATCTATCTAAACCATATCCAATAAAGTTTGATTTCTCTTTTCAGACACT--ATTCTATT 29
Query 1663 GTGGTGTT-CCTGGAGGAGTGAGCTG 1687
|||||||| || ||| ||||||||||
Sbjct 28 GTGGTGTTTCC-GGAAGAGTGAGCTG 4
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 132340395634
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5