BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg494960 Length=1412 Score E Sequences producing significant alignments: (Bits) Value AT5G48970.1 | Symbols: | Mitochondrial substrate carrier famil... 2130 0.0 > AT5G48970.1 | Symbols: | Mitochondrial substrate carrier family protein | chr5:19856830-19859763 REVERSE LENGTH=1481 Length=1481 Score = 2130 bits (1153), Expect = 0.0 Identities = 1292/1357 (95%), Gaps = 17/1357 (1%) Strand=Plus/Plus Query 21 CTCTATC-G-GAGAACACGAACGTTGACGGAGAAAGAATCTCT---C-TC-AACTTTTTT 73 ||||||| | ||||||||||||||||||||||||||||||||| | || |||||| Sbjct 30 CTCTATCGGAGAGAACACGAACGTTGACGGAGAAAGAATCTCTCAGCTTCTTTTTTTTTT 89 Query 74 AATAATCTTTTTCCAAGTCAAATCATTTTCAATCTCCACCCAGCTCTCAAATCCGCGGCA 133 ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 90 TATAATCTTTTTCCGAGTCAAATCATTTTCAATCTCCACCCAACTCTCAAATCCGCGGCA 149 Query 134 AACGTTTAAGGGTCATCTCAAATTTGCTTACTTTTT-CCCGGAAAAT-CATCAATGTCGA 191 |||||||||||||||||||||| || ||| |||||| |||||||| | |||||||||||| Sbjct 150 AACGTTTAAGGGTCATCTCAAAGTTCCTTGCTTTTTCCCCGGAAACTCCATCAATGTCGA 209 Query 192 GCCTTTTCGTTTCTCGCTTTATCAGCTTATAGAGA-CGAAAACCCTaaaaaaaTATGAGT 250 |||||||||||||||||||||| ||||||||||| | ||||||||| |||||||||| | Sbjct 210 CCCTTTTCGTTTCTCGCTTTATCTGCTTATAGAGACCAAAAACCCTAGAAAAATATGATT 269 Query 251 CCTACGACGGCGACGG-TG--GAGGATCCGGGACAGATTAAACGTGCCCTCATTGATGCT 307 |||||||||||||||| || || || |||||||||||||||||||| || ||||||||| Sbjct 270 CCTACGACGGCGACGGTTGATGATGAGCCGGGACAGATTAAACGTGCTCTGATTGATGCT 329 Query 308 TCTGCCGGAGCTATCTCTGGTGGTGTTTCTCGTACCT-TTACTTCTCCTCTTGATGTCAT 366 ||||||||||||||||||||||||||||||||| || | |||||||||||||||||||| Sbjct 330 TCTGCCGGAGCTATCTCTGGTGGTGTTTCTCGT-TCTGTAACTTCTCCTCTTGATGTCAT 388 Query 367 TAAGATTAGATTTCAGGTTCAATTAGAACCGACGACTTCATGGGGTTTGGTTCGGGGTAA 426 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || Sbjct 389 TAAGATTAGATTTCAGGTTCAGCTAGAACCGACGACTTCATGGGGTTTGGTTCGGGGAAA 448 Query 427 CTTGTCAGGAGCATCTAAGTATACTGGAATGGCT-CAGGCAACTAAAGATATATTTAGAG 485 |||||||||||| ||||||||||||||||||| | ||||| ||||||||||||||||||| Sbjct 449 CTTGTCAGGAGCTTCTAAGTATACTGGAATGG-TACAGGCGACTAAAGATATATTTAGAG 507 Query 486 AAGAAGGTTTTCGGGGGTTTTGGCGGGGTAATGTGCCAGCTTTGCTTATGGTCATGCCAT 545 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | Sbjct 508 AAGAAGGTTTTCGGGGGTTTTGGCGGGGTAATGTGCCAGCTTTGCTCATGGTCATGCCGT 567 Query 546 ATACTTCAATTCAGTTTACAGTACTACATAAGCTGAAATCTTTTGCATCGGGTTCTACTA 605 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 568 ATACTTCAATTCAGTTTACAGTACTACATAAGCTGAAATCTTTTGCATCTGGTTCTACTA 627 Query 606 AAACAGAGGATCATATACATTTGAGCCCTTATCTATCCTTCGTCAGTGGAGCGTTAGCAG 665 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 628 AAACAGAGGATCATATACATTTGAGCCCTTATCTATCCTTCGTCAGTGGAGCGTTAGCAG 687 Query 666 GATGTGCTGCTACTCTAGGATCTTATCCTTTTGATCTTCTAAGGACAATATTGGCTTCAC 725 |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| Sbjct 688 GATGTGCTGCTACTCTAGGATCTTATCCTTTTGATCTTTTAAGGACAATATTGGCCTCAC 747 Query 726 AAGGGGAGCCTAAGGTGTATCCAACAATGAGGTCTGCGTTTGTTGATATTATTCAGTCTC 785 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct 748 AAGGGGAGCCTAAGGTGTATCCAACAATGAGGTCTGCTTTTGTCGATATTATTCAGTCTC 807 Query 786 GAGGCATAAGAGGATTGTATAATGGATTAACACCAACTCTTGTTGAGATTGTGCCTTACG 845 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 808 GAGGTATAAGAGGATTGTATAATGGATTAACACCAACTCTTGTTGAGATTGTGCCTTACG 867 Query 846 CTGGCCTGCAATTTGGCACGTATGATATGTTTAAGCGTTGGATGATGGACTGGAATCGAT 905 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 868 CTGGCCTGCAATTTGGCACATATGATATGTTTAAGCGTTGGATGATGGACTGGAATCGAT 927 Query 906 ACATATTATCCTCCAAAAACCCGATCAACGTGGACACCAACCTTTCTAGCTTCCAGCTTT 965 ||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct 928 ACAAATTATCCTCCAAAATCCCGATCAATGTGGACACCAACCTTTCTAGCTTCCAGCTTT 987 Query 966 TTATTTGTGGGCTTGGGGCGGGCACTAGCGCCAAGCTCGTCTGCCATCCTCTTGATGTGG 1025 | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 988 TCATTTGTGGGCTTGGGGCGGGCACTAGCGCCAAGCTCGTCTGCCATCCCCTTGATGTGG 1047 Query 1026 TCAAAAAACGATTCCAGATTGAAGGTTTACAGAGACATCCAAGATATGGAGCCCGAGTGG 1085 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1048 TCAAAAAACGATTCCAGATTGAAGGTTTACAGAGACATCCAAGATATGGAGCCCGAGTGG 1107 Query 1086 AGCGACGTGCATACAGAAACATGTTAGACGGTCTCAGACAGATTATGATATCAGAAGGGT 1145 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1108 AGCGACGTGCATACAGAAACATGTTAGACGGTCTTAGACAGATTATGATATCAGAAGGGT 1167 Query 1146 GGCATGGGCTGTACAAAGGCATTGTGCCATCGACTGTGAAAGCTGCTCCTGCTGGTGCTG 1205 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1168 GGCATGGTCTGTACAAAGGCATTGTGCCATCGACTGTGAAAGCTGCTCCTGCTGGTGCTG 1227 Query 1206 TAACCTTTGTGGCCTATGAGTTTACCTCCGACTGGTTGGAATCAATTTCTTGGTAGAGAT 1265 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct 1228 TAACCTTTGTGGCCTATGAGTTTACCTCCGATTGGTTGGAGTCAATTTCTTGGTAGAGAT 1287 Query 1266 TTTACTCTTTTGATACTTATATCTTACTGTCTCTAGCATTTTTTATAGGCGCATATAAAC 1325 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||| Sbjct 1288 TTTACTCTTTTGATACTTATATCTTACTGTCTCTAGCATTTATTATAGGCTCATATGAAC 1347 Query 1326 ATTGATCATTTTTGGAATGTAAACGTCAAAGTGTTGT 1362 || |||||||||||||||||||||||||||||||||| Sbjct 1348 ATCGATCATTTTTGGAATGTAAACGTCAAAGTGTTGT 1384 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 69577955370 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5