BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg494961 Length=1011 Score E Sequences producing significant alignments: (Bits) Value AT5G49000.2 | Symbols: | Galactose oxidase/kelch repeat superf... 1382 0.0 > AT5G49000.2 | Symbols: | Galactose oxidase/kelch repeat superfamily protein | chr5:19864527-19865645 FORWARD LENGTH=1119 Length=1119 Score = 1382 bits (748), Expect = 0.0 Identities = 928/1014 (92%), Gaps = 15/1014 (1%) Strand=Plus/Plus Query 1 TTGTACTACCCGATTCTCTCCTTAGTCTCCAAGAGCTGTCGAACCCTCGTTGCTTCACCG 60 ||||||||||| |||||||| |||||||||||||||| ||||||||||||| |||| ||| Sbjct 118 TTGTACTACCCAATTCTCTCGTTAGTCTCCAAGAGCTCTCGAACCCTCGTTACTTCGCCG 177 Query 61 GAGCTTTACAAGACTCGATCTTTCTTCAACCGCACGGAGAGTTGTCTCTATGTGTGCTTA 120 ||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct 178 GAGCTATACAAGACTCGATCTTTCTTCAACCGAACGGAGAGTTGTCTCTATGTATGCTTA 237 Query 121 GAATTCCCTCCTGACCCTAACCCACGTTGGTTTACACTCTACCGAAAACCTAATCAAACC 180 || ||||||||||||||||||||||||||||||||||||||||||||||| | || | Sbjct 238 GATTTCCCTCCTGACCCTAACCCACGTTGGTTTACACTCTACCGAAAACC---T--AA-C 291 Query 181 CTAACCAACATCACCGAGAAGACAAAGAACTCAAGTGGGTACGTTTTGGCCCCAATCCCA 240 | || ||||||||||||||||||||||||||||| |||| ||||| |||||||||||| Sbjct 292 C-AA--AACATCACCGAGAAGACAAAGAACTCAAGCGGGTTTGTTTTAGCCCCAATCCCA 348 Query 241 AATCACCATTCCCCTAGTGCGAGTCTCGTTGCGGTTGGGTCTAATATCTATGCCATTGGT 300 ||||||||||| | |||| ||||| ||||||| |||||||||| ||||||||||||||| Sbjct 349 AATCACCATTCACATAGTTCGAGTATCGTTGCTATTGGGTCTAACATCTATGCCATTGGT 408 Query 301 GGATCCATTGAGAATGCACCGTCTTCTAGGGTCTCAATTTTAGACTGCAGGTCTCATACG 360 |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct 409 GGATCCATTGAGAATGCACCCTCTTCTAAAGTCTCAATTTTAGACTGCAGGTCTCATACA 468 Query 361 TGGCACGAGGCGCCAAGCATGCGGATGAAGCGGAATTACCCAGCTGCTAATGTTGTTGAT 420 ||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||| Sbjct 469 TGGCACGAGGCACCAAGCATGAGGATGAAGCGGAATTATCCAGCTGCTAATGTTGTTGAT 528 Query 421 GGGAAGATTTATGTAGCAGGAGGCTTGGAAGACTTTGATTCCTCTAAATGGATGGAGGTT 480 |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct 529 GGGAAGATTTATGTAGCAGGAGGCTTGGAAGAGTTTGATTCATCTAAATGGATGGAGGTT 588 Query 481 TTCGATACGAAGACTCAAACTTGGGAGTTTGTGTTGTGCCCTTTAGCGGAGAGATTCGTA 540 ||||||| |||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct 589 TTCGATATAAAGACTCAAACTTGGGAGTTTGTGTTAAGCCCTTTAGCGGAGAGATTTATA 648 Query 541 TACAGGAGCTTAGTGATTGATGGAGAAATCTACATTTTTGGGGATAAGGTTGTGACCTAC 600 || |||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct 649 TATAGGAGCTTGGTGATTGAAGGAGAAATCTACATTTTTGGGGATAAGGTTGTGACTTAC 708 Query 601 AAGCCAAAAGAAGATAGATGGGGAGATGAAGGAGAGCATCAGAGTATGGATTTAGGTTTG 660 ||||| ||||||||||||||||||| || |||||| ||||||||||||||||| || ||| Sbjct 709 AAGCCTAAAGAAGATAGATGGGGAGGTGTAGGAGAACATCAGAGTATGGATTTGGGATTG 768 Query 661 TATTTTCATTCGTATTGCGTTATAGATAACGTTCTCTATTGTTATCGACCTGGTGGAATC 720 | ||||||||| |||||||| |||||||| || || ||||||||||| |||||||||||| Sbjct 769 TTTTTTCATTCTTATTGCGTGATAGATAATGTACTGTATTGTTATCGTCCTGGTGGAATC 828 Query 721 AAATGGTATGAATCAGAGAAAAGATCGTGGAGGAAGTTGAGGGGTTTGAAAGGATTGTCT 780 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 829 AAATGGTATGAATCAGAGAAAAGATCGTGGAGGAAGTTGAGGGGTTTGAAGGGATTGTCT 888 Query 781 AAGCTTGCTAGTAGTTGTGTTAGGTTGGCGGATTATGGTGGAAAGATTGCGATTTTTTGG 840 |||||||||||||| ||||||| ||| |||||||||||||||||||| || |||| ||| Sbjct 889 AAGCTTGCTAGTAGCTGTGTTAAGTTAGCGGATTATGGTGGAAAGATGGCTCTTTTGTGG 948 Query 841 GACAAGTAT-TCCCCTTCTAGTGGTTATAAGAGTCATAT-GATTTCGTGTGCGGTGATTT 898 ||||||||| |||| || |||||| ||||||||||| | |||||||||||||||| ||| Sbjct 949 GACAAGTATATCCC-TTGTAGTGGGAATAAGAGTCAT-TCGATTTCGTGTGCGGTGGTTT 1006 Query 899 CCCTTG-GAAGTTGCAAAAATCAGGGTATTCGAGGAAAGGTTGAATGGTTTGATGATATG 957 |||||| || | ||||| |||||||||||| | ||||||||||| ||||||||||||||| Sbjct 1007 CCCTTGAGA-GATGCAAGAATCAGGGTATTAGGGGAAAGGTTGAGTGGTTTGATGATATG 1065 Query 958 CTTACAGTCCCTAGCTCTTATAACTTTGTGGGTGCTCTTGCTGCTACTCTTTGA 1011 ||||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1066 CTTACGGTACCTAGCTCTTATAACTTTGTGGGTGCTCTTGCTGCTACTCTTTGA 1119 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 49530868942 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5