BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg494969
Length=1187
Score E
Sequences producing significant alignments: (Bits) Value
AT3G49620.1 | Symbols: DIN11 | 2-oxoglutarate (2OG) and Fe(II)-... 1714 0.0
AT3G49630.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-depen... 1223 0.0
AT3G50210.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-depen... 863 0.0
> AT3G49620.1 | Symbols: DIN11 | 2-oxoglutarate (2OG) and Fe(II)-dependent
oxygenase superfamily protein | chr3:18393747-18396816
FORWARD LENGTH=1304
Length=1304
Score = 1714 bits (928), Expect = 0.0
Identities = 1051/1111 (95%), Gaps = 5/1111 (0%)
Strand=Plus/Plus
Query 42 TATATCATCGCAAATTTCGTCTTTACGTACGTAAGAGCAAAGCGTTTCTGTCATTTCCTT 101
|||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||
Sbjct 84 TATATCATCGCAAA-GTAGTCTTTACGTACGTAAGAGCAAAGCGTTTCTATCATTTCCTT 142
Query 102 CATGTCGAAATGGTGACTGCAGACTTCAAATCCCTACTACCAGTTATCGACATCAGTCCT 161
|| | |||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 143 AATATTGAAATGGTGA---CAGACTTCAAATCCCTACTACCAGTTATCGACATCAGTCCT 199
Query 162 TTACTGGCCAAATGTGATGATTTCGACATGGCTAAGGATGCCGGGGTTGCGGAAGTTGTC 221
||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||| |||
Sbjct 200 TTACTGGCCAAATGTGATGATTTCGACATGGCTGAGGATGCGGGGGTTGTGGAAGTAGTC 259
Query 222 AAAAAACTAGACAGGGCATGTCGGGACGTCGGATTCTTCTACGTGGTTGGTCATGGAATA 281
|||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 260 GGAAAACTGGACAGGGCATGTCGGGACGTCGGATTCTTCTACGTGATTGGTCATGGAATA 319
Query 282 TCGGATGATCTTATAAAGAAGGTGAGAGAGGTGACGCATCAATTTTTCGAGCTTCCTTAT 341
||||||||||||||||| ||||||| |||| |||||||||| || ||||||||||||||
Sbjct 320 TCGGATGATCTTATAAATAAGGTGAAAGAGATGACGCATCAGTTCTTCGAGCTTCCTTAC 379
Query 342 GAAGAGAAACTTAAGATCAAGATTACTCCAGCTGGTGGTTACAGAGGATATCAGAGAATT 401
|| ||||||||||||||||||||||||||| ||| ||| ||||||||||| || ||||||
Sbjct 380 GAGGAGAAACTTAAGATCAAGATTACTCCAACTGCTGGATACAGAGGATACCAAAGAATT 439
Query 402 GGAGTAAATTTTACAAGTGGGAAACAAGATATGCACGAAGCCATTGATTGTTACAGAGAG 461
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 440 GGAGTAAATTTTACGAGTGGGAAACAAGATATGCACGAAGCCATTGATTGTTACAGAGAG 499
Query 462 TTCAAGCAAGGGAGGTATGGGGACATTGGAAAGGTCTTGGAAGGGTCAAACCATTGGCCA 521
||||||||||||| |||||||||| |||||||||||||||||| ||||||| ||||||
Sbjct 500 TTCAAGCAAGGGAAACATGGGGACATCGGAAAGGTCTTGGAAGGGCCAAACCAGTGGCCA 559
Query 522 GGGAATCCTCAAGAGTACAAAGATTTGATGGAGGAGTACATTAAGCTATGCACAGATCTT 581
|| ||||||||||||||||||||||| |||||| |||| |||||||| ||||||||||||
Sbjct 560 GGAAATCCTCAAGAGTACAAAGATTTAATGGAGAAGTATATTAAGCTGTGCACAGATCTT 619
Query 582 TCTAGAAATATCTTAAGGGGAATCTCCTTAGCCCTTGGTGGATCACCTTATGAGTTCGAG 641
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 620 TCTAGAAATATCTTAAGGGGAATCTCATTAGCCCTTGGTGGATCACCTTATGAGTTTGAG 679
Query 642 GGAAAGATGCTTAGCGACCCTTTTTGGGTAATGCGTATCATTGGTTATCCAGGTGTAAAC 701
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 680 GGAAAGATGCTTAGAGACCCTTTTTGGGTAATGCGTATCATTGGTTATCCAGGTGTAAAC 739
Query 702 CAAGAAAATGTTATTGGATGTGGAGCTCACACTGACTATGGCTTGTTGACACTTATAAAT 761
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 740 CAAGAAAATGTTATTGGATGTGGAGCTCACACTGACTATGGCTTGTTGACGCTTATAAAT 799
Query 762 CAAGATGATGATAAAACTGCTCTTCAGGTGAAAAACGTGGACGGTGATTGGATACCAGCT 821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 800 CAAGATGATGATAAAACTGCTCTTCAGGTGAAAAACGTGGACGGTGATTGGATACCAGCT 859
Query 822 ATTCCGATCCCTGGATCGTTTATCTGCAACATCGGTGACATGTTAACGATACTATCAAAC 881
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 860 ATTCCGATCCCTGGATCATTTATCTGCAACATCGGTGACATGTTAACGATACTATCAAAC 919
Query 882 GGAGTTTACCAATCCACACTACATAAAGTAATCAACAACTCTCCTAAATACCGTGTTTGT 941
||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct 920 GGAGTTTACCAATCCACACTACATAAAGTAATCAATAACTCTCCTAAATACCGTGTATGT 979
Query 942 GTTGCATTCTTCTACGAGACTAACTTCGAGGCGGAGGTGGAGCCACTGGATATCTTCAAA 1001
|||||||| ||||||||||||||||||||||||||||| |||||||| |||||||| |||
Sbjct 980 GTTGCATTTTTCTACGAGACTAACTTCGAGGCGGAGGTAGAGCCACTTGATATCTTTAAA 1039
Query 1002 GAGAAGTACCCAAGAAAAGAAACATCTCAAGTTGCCAAAAGAGTTGTCTATGGACAGCAT 1061
|||||| | ||| ||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1040 GAGAAGCATCCACGAAAAGAAACATCTCAAGTTGCCAAAAGAGTCGTCTATGGACAGCAT 1099
Query 1062 CTGATTAACAAAGTCCTGACTACCTTTGCAAATTTAGTGGAAAACAGTTAATATGGTTGG 1121
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1100 CTGATTAACAAAGTCCTGACAACCTTTGCAAATTTAGTGGAAAACAGTTAATATGGTTGA 1159
Query 1122 TTGGGCTTTGGATGGTAATTGTTTTACCTAA 1152
| |||||||||||||||||||||||||||||
Sbjct 1160 T-GGGCTTTGGATGGTAATTGTTTTACCTAA 1189
> AT3G49630.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent
oxygenase superfamily protein | chr3:18397759-18400255
FORWARD LENGTH=999
Length=999
Score = 1223 bits (662), Expect = 0.0
Identities = 886/995 (89%), Gaps = 12/995 (1%)
Strand=Plus/Plus
Query 124 ACTTCAAATCCCTACTACCAGTTATCGACATCAGTCCTTTACTGGCCAAATGTGATGATT 183
|||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||
Sbjct 11 ACTTCAAATCCCTATTACCAGTTATCGACATCAGTCCTTTAGTGGTCAAATGTGATGATG 70
Query 184 TCGACATGGCTAAGGATGCCGGGGTTGCGGAAGTTGTCAAAAAACTAGACAGGGCATGTC 243
| ||||||| |||||||||| || ||||| ||||| ||| || |||||||| ||||
Sbjct 71 CCAACATGGCGGAGGATGCCGGCGTGGCGGAGGTTGTGGGAAAGCTGGACAGGGCCTGTC 130
Query 244 GGGACGTC-GGATTCTTCTACGTGGTTGGTCATGGAATATCGGATGATCTTATAAAGAAG 302
|||||| | |||||||||||||| ||||||||||||||||||| ||| |||||| ||||
Sbjct 131 GGGACG-CAGGATTCTTCTACGTAATTGGTCATGGAATATCGGAGGATTTTATAAGGAAG 189
Query 303 GTGAGAGAGGTGACGCATCAATTTTTCGAGCTTCCTTATGAAGAGAAACTTAAGATCAAG 362
||||||| | || |||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 190 GTGAGAGTGATGTCGCATCAATTCTTCGAGCTTCCTTATGAAGAGAAACTTAAGATCAAG 249
Query 363 ATTACTCCAGCTGGTGGTTACAGAGGATATCAGAGAATTGGAGTAAATTTTAC-AAGTGG 421
||||||||||||| ||| |||||||||||||||||||| ||| |||| || || || |||
Sbjct 250 ATTACTCCAGCTGCTGGATACAGAGGATATCAGAGAATCGGACTAAACTTAACGAA-TGG 308
Query 422 GAAACAAGATATGCACGAAGCCATTGATTGTTACAGAGAGTTCAAGCAAGGGAGGTATGG 481
||||||||||||||||||||||||||||||||||| |||||| |||||||||| | ||||
Sbjct 309 GAAACAAGATATGCACGAAGCCATTGATTGTTACAAAGAGTTTAAGCAAGGGAAGCATGG 368
Query 482 GGACATTGGAAAGGTCT-TGGAAGGGTCAAACCATTGGCCAGGGAATCCTCAAGAGTACA 540
||||||||||||||| | |||||||| ||||||| ||||||| |||||||||||| ||||
Sbjct 369 GGACATTGGAAAGGT-TATGGAAGGGGCAAACCAGTGGCCAGAGAATCCTCAAGAATACA 427
Query 541 AAGATTTGATGGAGGAGTACATTAAGCTATGCACAGATCTTTCTAGAAATATCTTAAGGG 600
|||| |||||||||||||| |||||||| |||| ||||||||||||||||||||||||||
Sbjct 428 AAGAGTTGATGGAGGAGTATATTAAGCTCTGCATAGATCTTTCTAGAAATATCTTAAGGG 487
Query 601 GAATCTCCTTAGCCCTTGGTGGATCACCTTATGAGTTCGAGGGAAAGATGCTTAGC-GAC 659
||||||| ||||||||||||||||||||||||||||| |||||||||||||||| | ||
Sbjct 488 GAATCTCATTAGCCCTTGGTGGATCACCTTATGAGTTTGAGGGAAAGATGCTTA-CAGAT 546
Query 660 CCTTTTTGGGTAATGCGTAT-CATTGGTTATCCAGGTGTAAACCAAGAAAATGTTATTGG 718
|| |||||| |||||||||| | |||||||||||||||||||||||||||||||||| ||
Sbjct 547 CCGTTTTGGATAATGCGTATTC-TTGGTTATCCAGGTGTAAACCAAGAAAATGTTATCGG 605
Query 719 ATGTGGAGCTCACACTGACTATGGCTTGTTGACACTTATAAATCAAGATGATGATAAAAC 778
||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct 606 ATGTGGAGCTCACACTGACTATGGCTTGTTGTCACTTATAAATCAAGATGATGACAAAAC 665
Query 779 TGCTCTTCAGGTGAAAAACGTGGACGGTGATTGGATACCAGCTATTCCGATCCCTGGATC 838
|||||||||||||| | || ||| ||| ||||||||||||| ||||||||||||||||||
Sbjct 666 TGCTCTTCAGGTGAGAGACTTGGCCGGCGATTGGATACCAGTTATTCCGATCCCTGGATC 725
Query 839 GTTTATCTGCAACATCGGTGACATGTTAACGATACTATCAAACGGAGTTTACCAATCCAC 898
||| |||||||||||||||||||| ||| ||| || || |||||||||||| |||||||
Sbjct 726 ATTTGTCTGCAACATCGGTGACATGCTAAAGATTCTTTCTAACGGAGTTTACGAATCCAC 785
Query 899 ACTACATAAAGTAATCAACAACTCTCCTAAATACCGTGTTTGTGTTGCATTCTTCTACGA 958
||| |||| ||| ||||| |||||||| |||||||||||| || | |||||| |||||
Sbjct 786 ACTTCATAGAGTGATCAATAACTCTCCCCGATACCGTGTTTGCGTCGGATTCTTTTACGA 845
Query 959 GACTAACTTCGAGGCGGAGGTGGAGCCACTGGATATCTTCAAAGAGAAGTACCCAAGAAA 1018
||| |||||||| || | ||||||||| |||||||||||||||||||||||||| ||||
Sbjct 846 GACGAACTTCGACGCAGCGGTGGAGCCGTTGGATATCTTCAAAGAGAAGTACCCAGGAAA 905
Query 1019 AGAAACATCTCAAGTTGCCAAAAGAGTTGTCTATGGACAGCATCTGATTAACAAAGTCCT 1078
|| |||||| |||||| |||||||||||||||||| |||||||| || ||||| |||
Sbjct 906 AGGAACATCCCAAGTTTTCAAAAGAGTTGTCTATGGGGAGCATCTGGTTCACAAACTCCA 965
Query 1079 GACTACCTTTGCAAA-TTTAGTGGAAAACAGTTAA 1112
||| || ||| |||| |||||||||| ||||||||
Sbjct 966 GACCACTTTT-CAAAATTTAGTGGAACACAGTTAA 999
> AT3G50210.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent
oxygenase superfamily protein | chr3:18614170-18616452
REVERSE LENGTH=1390
Length=1390
Score = 863 bits (467), Expect = 0.0
Identities = 849/1027 (83%), Gaps = 51/1027 (5%)
Strand=Plus/Plus
Query 108 GAAATGGTGACTGCAGACTTCAAATCCCTACTACCAGTTATCGACATCAGTCCTTTACTG 167
||||||| ||| | |||||||| | || ||||||| ||||||||| || ||||||
Sbjct 221 GAAATGGCGAC-G--GACTTCAAGT--CT-TTACCAGTCATCGACATCTCTCGTTTACT- 273
Query 168 GC-CAAATGTGATGATTTCGACATGGCTA-AGGATGCCGGGGTTGCGGAAGTTGTCAAAA 225
| ||| ||||||||| ||||||||| | |||||| ||| || || || |||||| |
Sbjct 274 CCTCAAGTGTGATGATCCCGACATGGC-AGAGGATGTCGGTGTGGCCGAGGTTGTCCAGC 332
Query 226 AACTAGACAGGGCATGTCGGGACGTCGGATTCTTCTACGTGGTTGGTCATGGAATATCGG 285
|||| || | || |||||||||| |||||||||||||||| | || ||||||||||| |
Sbjct 333 AACTGGATAAAGCTTGTCGGGACGCCGGATTCTTCTACGTGATAGGCCATGGAATATCAG 392
Query 286 ATGATCTTATAAAGAAGGTGAGAGAGGTGACGCATCAATT-TTTCGAGCTTCCTTATGAA 344
| ||| |||| || ||||| |||||| | || | | | || ||| ||||||||||||||
Sbjct 393 AGGATGTTATTAACAAGGTTAGAGAGATCACTCGTGAGTTCTTT-AAGCTTCCTTATGAA 451
Query 345 GAGAAACTTAAGATCAAGATTACTCCAGCTGGTGGTTACAGAGGATATCAGAGAATTGGA 404
||||||||||| ||||| || |||||||||| ||| ||||||||||||||||||||||||
Sbjct 452 GAGAAACTTAAAATCAAAATGACTCCAGCTGCTGGATACAGAGGATATCAGAGAATTGGA 511
Query 405 GTAAATTTTA-CAAGTGGGAA-ACAAGATATGCACGAAGCCATTGATTGTTACAGAGAG- 461
| |||| | | ||| |||| || |||||| || ||||||||||||||||||||||||
Sbjct 512 GAAAATGTGACCAA--AGGAATACCAGATATTCATGAAGCCATTGATTGTTACAGAGAGA 569
Query 462 TTCAAGCAAGGGAGGTATGGGGACATTGG-AAAGGTCT-TGGAAGGGTCAAACCATTGGC 519
|| ||||| |||| ||||||||| || || ||| || | |||||||| ||||||| ||||
Sbjct 570 TT-AAGCAGGGGAAGTATGGGGATATAGGCAAA-GT-TATGGAAGGGCCAAACCAGTGGC 626
Query 520 CAGGGAATCCTCAAGAGTACAAAGATTTGATGGAGGAGTACATTAAGCTATGCACAGATC 579
||| ||||||||| |||| ||||| |||||||||||||| ||||||||||| |||||||
Sbjct 627 CAGAGAATCCTCAGGAGTTTAAAGAGTTGATGGAGGAGTATATTAAGCTATGTACAGATC 686
Query 580 TTTCTAGAAATATCTTAAGGGGAATCTCCTTAGCCCTTGGTGGATCACCTTATGAGTTCG 639
|||||||||| || || || |||||||||||||| |||| ||||||||||||||||||||
Sbjct 687 TTTCTAGAAAGATTTTGAGAGGAATCTCCTTAGCTCTTGCTGGATCACCTTATGAGTTCG 746
Query 640 AGGGAAAGATG-CTTAGCGACCCTTTTTGGGTAATGCGTATCATTGGTTATCCAGGTG-T 697
||||||||||| || | || ||||||||||| |||||| | |||||||||||||||| |
Sbjct 747 AGGGAAAGATGGCTG-GTGATCCTTTTTGGGTGATGCGTCTTATTGGTTATCCAGGTGCT 805
Query 698 -A----A-A-----CCAA---GAAAATGTTATTGGATGTGGAGCTCACACTGACTATGGC 743
| | | |||| ||||||| |||||||||||||||||||||||||||||||
Sbjct 806 GAGTTCACAAATGGCCAACCTGAAAATGATATTGGATGTGGAGCTCACACTGACTATGGC 865
Query 744 TTGTTGACACTTATAAATCAAGATGATGATAAAACTGCTCTTCAGGTGAAAAACGTGGAC 803
||||| || ||| | |||||||||||||| ||||||||||||||||||| |||| ||| |
Sbjct 866 TTGTTAACTCTTGTGAATCAAGATGATGACAAAACTGCTCTTCAGGTGAGAAACTTGGGC 925
Query 804 GGTGATTGGATACCAGCTATTCCGATCCCTGGATCGTTTATCTGCAACATCGGTGACATG 863
||||| |||||| |||| ||||| ||||||||||||||| | ||||||||||||||||||
Sbjct 926 GGTGAGTGGATATCAGCCATTCCAATCCCTGGATCGTTTGTTTGCAACATCGGTGACATG 985
Query 864 TTAACGATACTATCAAACGGAGTTTACCAATCCACACTACATAAAGTAATCAACAACTCT 923
|||| |||||| ||||||||||| ||| |||||||||| |||| ||| ||||| ||||||
Sbjct 986 TTAAAGATACTTTCAAACGGAGTATACGAATCCACACTTCATAGAGTGATCAATAACTCT 1045
Query 924 CCTAAATACCGTGTTTGTGTTGCATTCTTCTACGAGACTAACTTCGAGGCGGAGGTGGAG 983
||| |||||||||||||||| ||||||||||| |||||||||||||| |||| |||||||
Sbjct 1046 CCTCAATACCGTGTTTGTGTCGCATTCTTCTATGAGACTAACTTCGACGCGGTGGTGGAG 1105
Query 984 CCACTGGATATCT-TCAAAGAGAAGTACCCAAGAAA-AGAA-AC-AT-CTCAAGTTGCCA 1038
||| ||||||| | | ||| |||||||||| || ||| | || | |||||| ||
Sbjct 1106 CCATTGGATATATGT-AAACAGAAGTACCCGGGAGGGAGAGGAGGATGC-CAAGTTTTCA 1163
Query 1039 AAAGAGTTGTCTATGGACAGCATCT-GATTAAC-AAAGTCCTGACTACCTTTGCAAATTT 1096
|||||| ||| |||||| ||||||| | | || ||||||| ||| | |||||| | | |
Sbjct 1164 AAAGAGCTGTGTATGGAGAGCATCTCG-T-AAGTAAAGTCCAGACCAACTTTGCTA-TGT 1220
Query 1097 AGTGGAA 1103
| |||||
Sbjct 1221 AATGGAA 1227
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 58282832745
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5