BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg494982 Length=485 Score E Sequences producing significant alignments: (Bits) Value AT1G36925.1 | Symbols: | unknown protein; Has 69 Blast hits to... 750 0.0 > AT1G36925.1 | Symbols: | unknown protein; Has 69 Blast hits to 69 proteins in 22 species: Archae - 0; Bacteria - 2; Metazoa - 45; Fungi - 4; Plants - 8; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). | chr1:13986436-13987289 FORWARD LENGTH=525 Length=525 Score = 750 bits (406), Expect = 0.0 Identities = 459/485 (95%), Gaps = 1/485 (0%) Strand=Plus/Plus Query 1 ATGGCGATTCGTTCCAAGAAGAAAAACAATCAAACAGAAAATCAGGATACAGAAAACATT 60 ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct 40 ATGGCTATTCGTTCCAAGAAGAAAAACAATCAAACAGAAAATCAGGATAAAGAAAACGTT 99 Query 61 CCTCCTAATTCTGAAGCTAACCCCATATCACCAATGCAACCAAACAGAGTTTCACCTAAT 120 ||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||| Sbjct 100 CCTCCTAGTTCTGAAGCTAACTCCATATCACCAATGCAACCAAAGAGAGTTTCACCTAAT 159 Query 121 AGCTTGAGTGATATTACAAATGAATGTGAATCTCCAAGGATGAAACGAATGCGTATTATA 180 ||||||||||||||||||||||||||||||||||||||||| ||||| ||| || ||||| Sbjct 160 AGCTTGAGTGATATTACAAATGAATGTGAATCTCCAAGGATAAAACGGATGTGTGTTATA 219 Query 181 AAGGAGACGAAAGATAAAAGAAAGAAAGGAGAATCATCTCCAAGTACTAACTTGGACCAA 240 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 220 AAGGAGACTAAAGAGAAAAGAAAGAAAGGAGAATCATCTCCAAGTACTAACTTGGACCAA 279 Query 241 AACTTGGACGAGACGACACAGAACGGCAAGAGCAATGGCAATGGATTTCCATGTACTGCA 300 || ||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||| Sbjct 280 AAGTTGGACGAGACGACACAGAACGGCAAGGGCAAGGGCAACAGATTTCCATGTACTGCA 339 Query 301 GCAAGTAGGAGGAAAACAAACGTGCATAAGGAACCATATATGCAAGAATCAAGACATGAT 360 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 340 ACAAGTAGAAGGAAAACAAACGTGCATAAGGAACCATATATGCAAGAATCAAGACAAGAT 399 Query 361 AATCACAAAGAAGCTCCATCTAAAGACCATGCATCATCCTCACGTTCACATAATTCACTA 420 ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 400 AATTACAAAGAAGCTCCATCTAAAGACCATGCATCATCGTCACGTTCACATAATTCACTA 459 Query 421 TATAACTCTGAAGAGTATGATGACAATGGGGATGCAATCTACAACTGTGAACACTGTGGA 480 |||||| |||| |||||||||||||||||||||||| |||||||||||||||| |||||| Sbjct 460 TATAACACTGACGAGTATGATGACAATGGGGATGCA-TCTACAACTGTGAACATTGTGGA 518 Query 481 GCTTT 485 ||||| Sbjct 519 GCTTT 523 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 23107707620 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5