BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg495032
Length=2347
Score E
Sequences producing significant alignments: (Bits) Value
AT5G49720.1 | Symbols: ATGH9A1, TSD1, DEC, KOR, RSW2, IRX2, KOR... 3762 0.0
AT4G24260.1 | Symbols: ATGH9A3, KOR3, GH9A3 | glycosyl hydrolas... 1160 0.0
> AT5G49720.1 | Symbols: ATGH9A1, TSD1, DEC, KOR, RSW2, IRX2, KOR1,
GH9A1 | glycosyl hydrolase 9A1 | chr5:20197391-20200288
REVERSE LENGTH=2360
Length=2360
Score = 3762 bits (2037), Expect = 0.0
Identities = 2258/2363 (96%), Gaps = 21/2363 (1%)
Strand=Plus/Plus
Query 1 ACATTTCTTCACTT-C-CACAC----ACTTC-TT-TCTC-TCT-TT-TCTTCTCCAGATC 49
|||||||||||||| | ||||| ||||| || |||| ||| || |||||||||||||
Sbjct 1 ACATTTCTTCACTTCCACACACTTTTACTTCTTTCTCTCTTCTCTTCTCTTCTCCAGATC 60
Query 50 TGAATCCCAAAACTGTGATTCATTGTTGTTGTTCTCTGCTACTTCATCGGAGAGCATCAT 109
|| |||||||| || ||||||||||||||||||||||||| ||| ||| |||||||||||
Sbjct 61 TG-ATCCCAAACCTTTGATTCATTGTTGTTGTTCTCTGCTGCTTTATCAGAGAGCATCAT 119
Query 110 CATGTACGGACGAGATCCATGGGGAGGTCCATTGGAGATCAACACTGCAGATTCCGCCAC 169
|||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 120 CATGTACGGAAGAGATCCATGGGGAGGTCCATTGGAGATAAACACTGCAGATTCCGCCAC 179
Query 170 CGACGATGATCGTAGTCGGAATTTGAACGATTTAGATCGTGCGGCTCTTTCACGGCCACT 229
|||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||
Sbjct 180 CGACGATGATCGTAGTCGGAATTTAAACGATTTGGATCGTGCGGCTCTTTCACGTCCACT 239
Query 230 CGATGAGACGCAGCAGAGTTGGTTACTTGGTCCAACGGAGCAGAAGAAGAAGAAGTATGT 289
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 240 AGATGAGACGCAGCAGAGTTGGTTACTTGGTCCAACGGAGCAGAAGAAGAAGAAGTACGT 299
Query 290 CGATCTCGGTTGTATTATCGTTAGCCGCCAGATATTTGTCTGGACTGTTGGTACTCTTGT 349
|||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||
Sbjct 300 CGATCTCGGTTGTATTATCGTTAGCCGCAAGATCTTCGTCTGGACTGTTGGTACTCTTGT 359
Query 350 TGCCGCCGCGTTACTCGCCGGATTTATCACCTTGATCGTTAAAACTGTGCCGCGACATCA 409
|||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||
Sbjct 360 TGCCGCCGCGTTACTCGCCGGATTCATTACCTTGATCGTTAAAACTGTGCCGCGTCATCA 419
Query 410 TCCTAAGAGTCCGCCGCCGGATAATTATACAT-TAGCTCTTCATAAAGCTCTTAAGTTCT 468
|||||||| ||||||||||||||||||||| | ||||||| || ||||||||||||||||
Sbjct 420 TCCTAAGACTCCGCCGCCGGATAATTATAC-TATAGCTCTACACAAAGCTCTTAAGTTCT 478
Query 469 TCAATGCTCAGAAATCTGGGAAATTGCCAAAGCATAATAACGTATCGTGGAGAGGTAATT 528
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct 479 TCAATGCTCAGAAATCTGGGAAATTGCCAAAGCATAATAACGTGTCATGGAGAGGTAATT 538
Query 529 CTGGGCTTCAAGATGGGAAAGGTGAAACAGGAAGCTTCTATAAAGATTTGGTGGGAGGTT 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 539 CTGGGCTTCAAGATGGGAAAGGTGAAACAGGAAGCTTCTATAAAGATTTGGTGGGAGGTT 598
Query 589 ATTATGATGCTGGTGATACTATCAAGTTCAATTTCCCCATGGCTTATGCTATGACTATGT 648
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 599 ATTATGATGCTGGTGATGCTATCAAGTTCAATTTCCCCATGGCTTATGCTATGACTATGT 658
Query 649 TGAGCTGGAGTGTTATTGAGTATAGTGCTAAATACGAAGCTGCGGGTGAGCTCACTCATG 708
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct 659 TGAGCTGGAGTGTTATTGAATATAGTGCTAAATACGAAGCTGCTGGTGAGCTCACTCATG 718
Query 709 TTAAGGAGCTTATCAAATGGGGAACTGATTACTTTCTCAAGACTTTCAATAGTACTGCTG 768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 719 TTAAGGAGCTTATCAAATGGGGAACTGATTACTTTCTCAAGACTTTCAATAGTACTGCTG 778
Query 769 ACTCCATTGATGATCTTGTGTCACAGGTTGGATCAGGGAATACTGAGGATGGAAATACAG 828
| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 779 ATTCCATTGATGATCTTGTGTCACAGGTTGGATCAGGGAATACTGATGATGGAAATACAG 838
Query 829 ATCCTAATGACCATTACTGTTGGATGCGGCCTGAGGATATGGACTATAAAAGGCCTGTGA 888
|||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct 839 ATCCTAATGACCATTACTGTTGGATGCGACCTGAGGATATGGACTATAAAAGGCCCGTGA 898
Query 889 CTACGTGTAATGGTGGATGTTCGGATCTCGCTGCAGAGATGGCAGCTGCTCTGGCTTCAG 948
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 899 CTACTTGTAATGGTGGATGTTCGGATCTCGCTGCAGAGATGGCAGCTGCTCTGGCTTCAG 958
Query 949 CGTCTATTGTATTCAAGGATAACAAGGAATATTCTAAAAAGCTTGTTCATGGTGCTAAGA 1008
| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 959 CATCTATTGTATTCAAGGATAACAAGGAATATTCTAAAAAGCTTGTCCATGGTGCTAAGG 1018
Query 1009 CGGTTTATCAGTTTGGAAGGACTCGGAGAGGGAGATATAGTGCAGGCACTGCGGAATCTA 1068
||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1019 TGGTGTATCAGTTTGGAAGGACGAGGAGAGGGAGATATAGTGCAGGCACTGCGGAATCTA 1078
Query 1069 GCAAGTTTTATAATTCAAGCATGTATTGGGATGAGTTCATTTGGGGTGGTGCTTGGTTGT 1128
||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||
Sbjct 1079 GCAAGTTCTATAATTCAAGTATGTATTGGGATGAGTTCATTTGGGGTGGTGCTTGGATGT 1138
Query 1129 ACTATGCTACAGGAAATGTAACCTATCTCAATCTAATCACCCAACCCACTATGGCCAAGC 1188
| |||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct 1139 ATTATGCTACCGGAAATGTAACGTATCTCAATCTAATCACCCAACCTACTATGGCCAAGC 1198
Query 1189 ATGCTGGTGCCTTCTGGGGTGGTCCTTACTATGGTGTATTTAGCTGGGACAACAAGCTTG 1248
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1199 ATGCTGGTGCCTTCTGGGGTGGCCCTTACTATGGTGTATTTAGCTGGGACAACAAGCTTG 1258
Query 1249 CTGGTGCTCAGCTGCTGTTGAGCCGGTTGAGGTTGTTTCTGAGTCCTGGATATCCATATG 1308
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CTGGTGCTCAGTTGCTGTTGAGCCGGTTGAGGTTGTTTCTGAGTCCTGGATATCCATATG 1318
Query 1309 AAGAAATTCTAAGGACCTTCCACAATCAGACTAGCATAGTCATGTGCTCATACTTGCCTG 1368
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1319 AAGAAATTCTAAGGACCTTCCACAATCAGACCAGCATAGTCATGTGCTCATACTTGCCTA 1378
Query 1369 TTTTCAACAAATTTAATAGAACCAACGGAGGTTTAATAGAGTTGAATCATGGAGCCCCTC 1428
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||| || |
Sbjct 1379 TTTTCAACAAATTTAACAGAACCAATGGAGGTTTAATAGAGTTGAATCATGGAGCTCCAC 1438
Query 1429 AGCCTCTGCAGTATTCTGTGAATGCAGCTTTCCTAGCGACACTATACAGTGATTATCTGG 1488
|||| ||||| |||||||| |||||||||||| ||||||| |||||||||||||||||||
Sbjct 1439 AGCCGCTGCAATATTCTGTAAATGCAGCTTTCTTAGCGACTCTATACAGTGATTATCTGG 1498
Query 1489 ATGCTGCTGATACTCCTGGATGGTACTGTGGACCTAATTTCTATTCAACTAGTGTGCTAC 1548
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct 1499 ATGCTGCTGATACTCCTGGATGGTACTGTGGACCTAATTTCTATTCGACAAGTGTGCTAC 1558
Query 1549 GTGACTTTGCTAGATCCCAGATTGATTATGTACTCGGTAAAAACCCTCGGAAAATGAGTT 1608
||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct 1559 GTGACTTTGCTAGATCCCAGATTGATTATATACTGGGTAAAAACCCTCGGAAAATGAGTT 1618
Query 1609 ATGTCGTTGGTTTTGGCACAAAATACCCAAAACATGTGCATCACAGAGGAGCTTCGATAC 1668
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1619 ATGTCGTTGGTTTTGGCACAAAATACCCAAGACATGTGCATCACAGAGGAGCTTCGATAC 1678
Query 1669 CCAAGAACAAAGTCAAATATAACTGCAAAGGAGGATGGAAATGGAGAGACAGCAAGAAAC 1728
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1679 CCAAGAACAAAGTCAAGTATAACTGCAAAGGAGGATGGAAATGGAGAGACAGCAAGAAAC 1738
Query 1729 CAAACCCAAACACGATTGAAGGAGCCATGGTTGCTGGTCCTGACAAGCGCGACGGGTTCC 1788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1739 CAAACCCAAACACGATTGAAGGAGCCATGGTTGCTGGTCCTGACAAGCGCGACGGGTACC 1798
Query 1789 GTGATGTCCGTATGAACTACAACTACACTGAACCGACTCTTGCAGGCAATGCTGGTCTAG 1848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1799 GTGATGTCCGTATGAACTACAACTACACTGAACCGACTCTTGCAGGCAATGCTGGTCTAG 1858
Query 1849 TCGCAGCTCTCGTGGCATTGTCGGGTGAAGCAGAAGCCACCGGTAAGATAGACAAAAACA 1908
|||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||
Sbjct 1859 TCGCAGCTCTTGTGGCATTATCGGGTGAAGAAGAAGCCACCGGTAAGATAGACAAAAACA 1918
Query 1909 CTATTTTCTCAGCTGTTCCTCCATTGTTCCCTACTCCACCGCCTCCACCAGCACCATGGA 1968
|||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct 1919 CTATTTTCTCAGCTGTTCCTCCTTTGTTCCCTACTCCACCACCTCCACCAGCACCATGGA 1978
Query 1969 AACCTTGAGAAAGCTAGACTTGTGTGATTCTGTCGCCGCTGCCAGAAAAGAATGAATGAG 2028
|||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||
Sbjct 1979 AACCTTGAGAAAGCTAGACTTGTGTGATTCTGTCGCTGCTGCCAAAAAA-AATGAATGAG 2037
Query 2029 GTAAG--G-ATTTTGGGTGTGAGACCAGAAGATTAGAAGCTAAACACAAGTCAGCCATAA 2085
||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2038 GTAAGAAGGATTT-GGGTGTGAGACCAGAAGATTAGAAGCTAAACACAAGTCAGCCATAA 2096
Query 2086 CCAA-CTACTAAGGATTTCATTTGGCTTTACTAGATACAAACCCGGGGTGGGTTGCTTTA 2144
|||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 2097 CCAAACTACTAAGGATTTCATTTGGCTTTACTAGATACAAACACGGGGTGGGTTACTTTA 2156
Query 2145 CCACAAGCATTGTCTTTCTTTTCTTTTTTGGGGTTGCTCTTTTGTTCTTGTGAGATATCA 2204
||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct 2157 CCACAAGCATTGTCTTTCTTTTCTTTTTTTGGGTTGCTGTTTTGTTCTTGTGAGATATCA 2216
Query 2205 TATATATCTATGCGTTTTACTCTGTATATGTTTGATACCAAACTTGTATTCTTTGAAAAA 2264
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2217 TATATATCTATGCGTTTTACTCTGTATATGTTTGATACCAAACTTGTATTCTTTGATAAA 2276
Query 2265 CAATTTAATGAACTGTCTTAAACTCTTAACTATGGGGGTATTGTGCAAGTGTGAGATCAA 2324
|||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||
Sbjct 2277 CAATTTAATGAACTGTATTAAACTTTTAACTATGTTT-TATTGTGCAAGTGTGAGATCAA 2335
Query 2325 CTTGGAATAAAAACTGTAGTCTA 2347
| |||||||| ||||||||||||
Sbjct 2336 CCTGGAATAACAACTGTAGTCTA 2358
> AT4G24260.1 | Symbols: ATGH9A3, KOR3, GH9A3 | glycosyl hydrolase
9A3 | chr4:12577871-12580133 REVERSE LENGTH=1863
Length=1863
Score = 1160 bits (628), Expect = 0.0
Identities = 1514/1926 (79%), Gaps = 123/1926 (6%)
Strand=Plus/Plus
Query 111 ATGTACGGACGAGATCCATGGGGAGGTCCAT-TGGAGATCAACACTGCAGATTCCGCCAC 169
||||||||||| ||||||||||| ||||| | | |||||||| | || || ||| ||
Sbjct 1 ATGTACGGACGTGATCCATGGGGTGGTCC-TCTAGAGATCAATGCGGCGGACTCCATGAC 59
Query 170 CGACGATGATCGTAGTCGGAA-TTTGAACGA-TTTAGATCGTGCGGCTCTTTCACGGCCA 227
||||| ||||||||||| || | || || || || |||||| ||| ||| ||||||
Sbjct 60 AGACGACGATCGTAGTCGAAACCTACAA-GACCTT-GACCGTGCGACTCCTTCGCGGCCA 117
Query 228 CTCGATGAGACGCAGCAGAGTTGG-TTACTTGGTCCAACGGAGCAGAAGAAGAAGAAGTA 286
||||| || ||||| ||||||||| || ||||| |||| | || |||||||| |||||
Sbjct 118 CTCGACGAAACGCAACAGAGTTGGCTT-CTTGGACCAAAAGTGCTTAAGAAGAAAAAGTA 176
Query 287 TGTCGATCTCGGTTGTAT-TATCGTTAGCCGCCAGATATTTGTCTGGACTGTTGGTACTC 345
|||||||| || ||||| | | || ||||| |||| ||| | |||||| |||| || |
Sbjct 177 CGTCGATCTTGGATGTATCT-TAGTCAGCCGTAAGATCTTTCTTTGGACTCTTGGAAC-C 234
Query 346 -TTGTTGCCGCCGCGT-TACTCGCCGGATTTATCACCTTGATCGTTAAAAC-TGTGCCGC 402
|||| | | || | | ||| | ||||| || || |||||||||||||| | |||| |
Sbjct 235 ATTGTAGTAACTGC-TCTTCTCTCTGGATTCATAACTTTGATCGTTAAAACAT-TGCCAC 292
Query 403 GA-CATCATCC-TAA-GAGTCCGCCGCCGGATAATTATACAT-TAGCTCTTCATAAAGCT 458
| || || || || || || || ||||||||||| || | | ||||| | || ||||
Sbjct 293 -ACCACCA-CCACAAGGA-ACCACCACCGGATAATTACAC-TATCGCTCTCCGTACAGCT 348
Query 459 CTTAAGTTCTTCAATGCTCAGA-AATCTGGGAAA-TTGCCAAAG--CA-TAATAACGTAT 513
|| ||||||||||||||||| | ||||||||||| || |||||| || | |||| ||||
Sbjct 349 CTCAAGTTCTTCAATGCTCA-ACAATCTGGGAAACTT-CCAAAGAACATTTATAATGTAT 406
Query 514 CGTGGAGAG-GTAATTCTGGGCTTCAAGATGGGAAAGGTGAAACAGGA-AGCTTCTATAA 571
| ||||| | | ||||| | || |||||||| || || || ||||| | | ||| ||
Sbjct 407 CATGGAG-GCATGATTCTTGTCTACAAGATGGTAAGGGAGATCCAGGACA-ATGCTACAA 464
Query 572 AGATTTGGTGGGAGGTTATTATGATGCTGGTGATACTATCAAGTTCAATTTCCCCATGGC 631
||||||||| |||||||| ||||||||||| ||| ||||||| ||||| ||||| ||| |
Sbjct 465 AGATTTGGTAGGAGGTTACTATGATGCTGGAGATTCTATCAAATTCAACTTCCCAATGTC 524
Query 632 TTATGCTATGACTATGTTGAGCTGGAGTGTTATTGAGTATAGTGCTAAA-TACGAAGCTG 690
|||||||||||||||||||||||||||||| || || || || || ||| ||| ||||||
Sbjct 525 TTATGCTATGACTATGTTGAGCTGGAGTGTAATCGAATACAGCGC-AAAGTACCAAGCTG 583
Query 691 CGGGTGAGCTC-ACTCATGTTAAGGAGCTTATCAAATGGGGAACTGATTACTTTCTCAAG 749
| || ||||| | |||||||| || || ||||||||||||||||| ||||||||||||
Sbjct 584 CTGGCGAGCTTGAA-CATGTTAAAGAACTCATCAAATGGGGAACTGACTACTTTCTCAAG 642
Query 750 ACTTTCAATAGTACTGCTGACTC-CAT-TGATGATCTTGTGTCACAGGTTGGATCAGGGA 807
||||||||||||| |||||| | ||| | ||| | | ||| |||||| ||||| || |
Sbjct 643 ACTTTCAATAGTAGTGCTGA-TAACATCT-ATGTTATGGTGGAACAGGTCGGATCTGG-A 699
Query 808 AT-A-C--T-GAGGATG-GAAATACAGATCCTAATGACCATTACTGTTGGATGCGGCCTG 861
| | | | ||||| | ||| | || | ||||||||||||||||||||||| ||||
Sbjct 700 GTTAGCGGTAGAGGAAGTGAATTGCA---C--AATGACCATTACTGTTGGATGCGTCCTG 754
Query 862 AGGATATGGACTATAAAAGGCCTGTGA-CT-ACGTGTAATGGTGGATGTTCGGATCTCGC 919
||||||| | ||||||||| |||| | || | ||| | || | || || ||||| ||
Sbjct 755 AGGATATTCATTATAAAAGGACTGT-ATCTCAA-TGTTACAGTAGCTGCTCTGATCTTGC 812
Query 920 TGCAGAGATGGCAGCTGCTCTGGCTTCAGCGTCTATTGTATTCAAGGATAACA-AGGAAT 978
||||||||||||||||||||||||||| || || |||||||||||||| |||| | | |
Sbjct 813 TGCAGAGATGGCAGCTGCTCTGGCTTCTGCATCCATTGTATTCAAGGACAACAGATTA-T 871
Query 979 ATTCTAAAAAGCTTGTTCATGGTGCTAAGACGGTTTATCAG-TTTGGAAGGACT-C--GG 1034
|||| ||||| ||||||||||||||||||||| ||||| || |||| || ||| | ||
Sbjct 872 ATTCGAAAAATCTTGTTCATGGTGCTAAGACGCTTTAT-AGGTTTGCAACTACTTCTAGG 930
Query 1035 AGAGGGAGATATAGTGCAGGCACTGCGGAA----TCTAGCAAGTTTTATAATTCAAGCAT 1090
| | ||||| ||| || | || | || |||||||| |||||||| || |||||
Sbjct 931 A-AT--AGATACAGT-CAAA-A-TG-GTAAAGAGTCTAGCAAATTTTATAACTCTAGCAT 983
Query 1091 GTATTG-GGATGAGTTCATT-TGGGGTGGTGCTTGGTTGTACTATGCTACAGGAAATGTA 1148
|| ||| ||||||| | ||| ||||||||||||||| |||| |||||||| |||||||||
Sbjct 984 GT-TTGAGGATGAGCT-ATTATGGGGTGGTGCTTGGCTGTATTATGCTACTGGAAATGTA 1041
Query 1149 ACCTATCTC-AATCTAATCACCCAA-C-CCACTATGGCCAAGCATGCTGGTGCCTTCTGG 1205
|| ||||| || | | | ||| | | |||| ||||| || | |||||||||||| ||
Sbjct 1042 ACTTATCTAGAA-CGAGTTACC-AGTCACCAC-ATGGCTGAGAAAGCTGGTGCCTTC-GG 1097
Query 1206 GG-TGGTCCTTACTATGGTGTATTTAGCTGGGACAACAAGCTTGCTGGTGCTCAGCTGCT 1264
| | ||||||| ||||| |||||||||||||||||||||||| | || |||||| ||||
Sbjct 1098 GAATAGTCCTTATTATGGCGTATTTAGCTGGGACAACAAGCTTCCAGGGGCTCAGTTGCT 1157
Query 1265 GTTGAGC-CGGTTGAGGTTGTTTCTGAGTCCTGGATATCCATATGAAGAAAT-TCTAAG- 1321
||| | | ||| ||||| |||||||||| |||||||||||||||||||| || | ||||
Sbjct 1158 GTTAA-CACGGATGAGGCTGTTTCTGAGCCCTGGATATCCATATGAAGACATGT-TAAGC 1215
Query 1322 GACCTTCCACAATCAGACTAG-CATAGTCATGTGCTCATACTTGCCTGTTTT-CAACAAA 1379
|| ||| | || || || || || ||| |||||||| ||||||||| | || ||| |||
Sbjct 1216 GAATTTC-ATAACCAAAC-AGGCAGAGTTATGTGCTCTTACTTGCCT-TATTACAAGAAA 1272
Query 1380 TTTAATAGAACCAACGGAGGTTTAATAGAGTTGAATCATGGAGCCCCTCAGCCTCTGCAG 1439
||||| |||||||| |||||||| || ||||||| |||||||| || |||||||| ||
Sbjct 1273 TTTAACAGAACCAATGGAGGTTTGATTCAGTTGAACCATGGAGCTCCACAGCCTCTTCAA 1332
Query 1440 TAT-TCTGTGAATGCAGCTTTCCTAGCGACACTATACAGTGATTATCTGGATGCTGCTGA 1498
||| | || ||||| |||||| ||||| |||||| |||||||||||| || ||||||||
Sbjct 1333 TATGT-TGCAAATGCGGCTTTCTTAGCGGCACTATTCAGTGATTATCTAGAGGCTGCTGA 1391
Query 1499 TACTCCTGGATGGTACTGTGGACCTAATTTCTATTCAACT-AGTGTGCTACGTGACTTTG 1557
|||||| |||||||||||||| ||||| |||||| | ||| | | | ||||| |||||
Sbjct 1392 TACTCCCGGATGGTACTGTGGTCCTAACTTCTATACTACTGAAT-TCCTACGCAACTTTT 1450
Query 1558 CTAGATCCCAGATTGATTATGTACTCGGTAAAAACCCTCGGAAAATGAGTTATGTCGTTG 1617
| ||||| |||||||||||| |||| ||||||||||||||||| ||||||||||| || |
Sbjct 1451 CAAGATCGCAGATTGATTATATACTTGGTAAAAACCCTCGGAAGATGAGTTATGTTGTGG 1510
Query 1618 GTTTTGGCACAAAA-TACCCAAAACATGTGCATCACAGAGGAGCTTCGATACCCAAGAAC 1676
||| ||| ||| ||||| ||||| |||||||||||||||||||| || || ||||||
Sbjct 1511 GTTATGGG-CAACGGTACCCGAAACAAGTGCATCACAGAGGAGCTTCAATTCCAAAGAAC 1569
Query 1677 AAAGTCAAATATAAC-TGCAAAGGAGGATGGAAATGGAGAGACAGCAAGAAACCA-AACC 1734
| | ||| | ||| |||| |||||||| ||||||| | | ||||| ||| | ||||
Sbjct 1570 AT-G--AAAGA-AACCTGCACAGGAGGATTTAAATGGAAAAAGAGCAA-AAAGAATAACC 1624
Query 1735 CAAACACGATTGAA-GGAGCCATGGTTGCTGGTCCTGACAAGCGCGACGGGTTCCGTGAT 1793
||||| | ||| || ||||| ||||||||||| || ||||||| ||||| |||| ||
Sbjct 1625 CAAACGCTATT-AATGGAGCAATGGTTGCTGGACCAGACAAGCATGACGGATTCCACGAC 1683
Query 1794 GTCCGTATGAACTACAACTACACTGAACCGACTCTTGCAGGCAATGCTGGTCTAGTCGCA 1853
| || | || |||||||| || || |||||||| || || |||||||||||||||||
Sbjct 1684 ATACGAACAAATTACAACTATACAGAGCCGACTCTAGCGGGAAATGCTGGTCTAGTCGCC 1743
Query 1854 GCTCTCGTGGCATTGTC-GGGTGAAGCAGAAGCCACCGGTAAG-ATAGACAAAAACACTA 1911
||||| ||||| || || ||| ||| | |||| ||| | || |||||||||||||
Sbjct 1744 GCTCTGGTGGCTTTATCAGGG-GAA--A-AAGCGGTTGGTG-GTATTGACAAAAACACTA 1798
Query 1912 TTTTCTCAGCTGTTCCTCCATTG-TTCCCTACTCCACCGCCTCCACCAGCACCATGGAAA 1970
| ||||| || || ||||||||| || || ||||||| || |||||||| |||| |
Sbjct 1799 TGTTCTCTGCCGTACCTCCATTGGTTATGG-CTACACCGCCGCCTCCAGCACCTTGGACA 1857
Query 1971 CCTTGA 1976
||||||
Sbjct 1858 CCTTGA 1863
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 116515464945
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5