BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg495054 Length=2310 Score E Sequences producing significant alignments: (Bits) Value AT5G49980.1 | Symbols: AFB5 | auxin F-box protein 5 | chr5:2033... 3535 0.0 AT4G24390.2 | Symbols: | RNI-like superfamily protein | chr4:1... 1456 0.0 > AT5G49980.1 | Symbols: AFB5 | auxin F-box protein 5 | chr5:20333964-20336665 REVERSE LENGTH=2450 Length=2450 Score = 3535 bits (1914), Expect = 0.0 Identities = 2206/2341 (94%), Gaps = 43/2341 (2%) Strand=Plus/Plus Query 1 AAATAAGCCCCAAATAATGGAGACGAAGTGGAGAGAGAAAGCTCCCACTCTCTCACACCC 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4 AAATAATCCCCAAATAATGGAGACGAAGTGGAGAGAGAAAGCTCCCACTCTCTCACACCC 63 Query 61 CAAAGcttcttcttcttcctcttcctcttcctcttcttcttctctaatctgaatccaaag 120 |||||||||||||||||| || || ||||||||||| ||||||||||||||||||||||| Sbjct 64 CAAAGCTTCTTCTTCTTCTTCCTCTTCTTCCTCTTCCTCTTCTCTAATCTGAATCCAAAG 123 Query 121 cctctctcttTATGACACAAGATCGCTCAGAAATGTCTGAAGATGACGACGACCAACAAT 180 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 124 CCTCTCTCTTTATGACACAAGATCGCTCAGAAATGTCTGAAGATGACGATGACCAACAAT 183 Query 181 CTTCACCGTTGGATCTACCCTCTACCGCC--A--T-A-----GCT--TCTTCCTCTACAC 228 || |||||||||||||||||||||||||| | | | ||| ||||||||| ||| Sbjct 184 CTCCACCGTTGGATCTACCCTCTACCGCCATAGCTGATCCTTGCTCATCTTCCTCTTCAC 243 Query 229 CAAACAAATCTCGTAACTGTATCTCAAAGTCTCAAACTTTCCCTGACCATGTTCTCGAAA 288 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 244 CAAACAAATCTCGTAACTGTATCTCAAATTCTCAAACTTTCCCTGACCATGTTCTCGAAA 303 Query 289 ACGTTCTTGAGAACGTTCTTCAGTTCCTAGATTCAAGATGTGACCGTAACGCTGCTTCTT 348 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 304 ACGTACTTGAGAACGTTCTTCAGTTCCTAGATTCAAGATGTGACCGTAACGCTGCTTCTC 363 Query 349 TAGTTTGCAAATCTTGGTGGCGTGTTGAAGCTTTGACTCGATCTGAGGTTTTTATTGGTA 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 364 TAGTTTGCAAATCTTGGTGGCGTGTTGAAGCTTTGACTCGATCTGAGGTTTTTATTGGTA 423 Query 409 ACTGTTACGCTCTTTCTCCGGCGAGGTTGACTCAGAGATTCAAGCGTGTTAGGTCACTTG 468 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 424 ACTGTTACGCTCTTTCTCCGGCGAGGTTGACTCAGAGATTCAAGCGTGTTAGGTCTCTTG 483 Query 469 TGCTTAAAGGGAAACCTAGGTTTGCTGATTTCAATCTCATGCCTCCTGATTGGGGTGCTA 528 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 484 TGCTGAAAGGGAAACCTAGGTTTGCTGATTTCAATCTCATGCCTCCTGATTGGGGTGCTA 543 Query 529 ATTTTGCTCCTTGGGTTTCTACTATGGCTAAAGCTTATCCTTGGCTTGAGAAAGTTGATT 588 ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 544 ATTTTGCTCCTTGGGTTTCTACTATGGCTCAAGCTTATCCTTGTCTTGAGAAAGTTGATT 603 Query 589 TGAAAAGGATGTTTGTTACTGATGATGATTTAGCTCTTCTTGCTGACTCTTTTCCTGGGT 648 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 604 TGAAGAGGATGTTTGTTACTGATGATGATTTAGCTCTTCTTGCTGACTCTTTTCCTGGGT 663 Query 649 TTAAAGAGCTTATCTTGGTTTGTTGTGAAGGTTTTGGTACTAGTGGTAT-TGCTATTGTT 707 ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 664 TTAAAGAGCTTATCTTGGTTTGTTGTGAAGGTTTTGGTACTAGTGGTATCT-CTATTGTT 722 Query 708 ACCAATAAGTGCAGAAAGCTGAAAGTGCTTGATTTGATTGAGTCTGAGGTTACGGATGAT 767 |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 723 GCCAACAAGTGCAGAAAGCTGAAAGTGCTTGATTTGATTGAGTCTGAGGTCACGGATGAT 782 Query 768 GAAGTGGATTGGATTTCTTGTTTCCCTGAGGATGTAACTAGTCTTGAA-TCTTTAGCTTT 826 |||||||||||||| |||||||||||||||||||||||| || ||| | ||||||||||| Sbjct 783 GAAGTGGATTGGATCTCTTGTTTCCCTGAGGATGTAACTTGT-TTGGAGTCTTTAGCTTT 841 Query 827 TGACTGTGTGGAAGCTCCTATCAATTTTAAGGCGCTTGAGGGTCTTGTTGCTAGGTCACC 886 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 842 TGACTGTGTGGAAGCTCCTATCAATTTTAAGGCGCTTGAGGGTCTTGTTGCTAGGTCACC 901 Query 887 GTTCTTGAAGAAACTTAGGCTGAACAGGTTTGTGTCCCTTGTGGAGCTACATCGTCTGCT 946 ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct 902 GTTCTTGAAGAAACTTAGGCTAAACAGGTTTGTGTCTCTTGTGGAGCTACATCGTCTGCT 961 Query 947 ACTTGGAGCTCCACAGCTTACTAGTCTTGGGACAGGTTCATTTAGCCATGATGAGGAACC 1006 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 962 ACTTGGAGCTCCACAGCTTACTAGTCTTGGGACTGGTTCATTTAGCCATGATGAGGAACC 1021 Query 1007 TCGGAGTGAGCAAGAACCAGATTATGCTGCTGCATTTCGTGCTTGTAAATCTGTTGTTTG 1066 || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1022 TCAGAGTGAGCAAGAACCAGATTATGCTGCTGCATTTCGTGCTTGTAAATCTGTAGTTTG 1081 Query 1067 CCTGTCAGGATTTAGGGAGTTGATGCCGGAGTATCTTCCAGCTATCTTTCCGGTGTGCGC 1126 | ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1082 CTTGTCAGGGTTTAGAGAGTTGATGCCGGAGTATCTTCCAGCTATCTTTCCGGTGTGCGC 1141 Query 1127 TAATCTCACTTCCTTGAACTTCAGTTATGCTAATATTTCTCCTGACATGTTTAAGCCCAT 1186 ||||||||| ||| ||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 1142 TAATCTCACCTCCCTGAACTTCAGTTATGCTAACATTTCTCCTGACATGTTCAAGCCCAT 1201 Query 1187 CATACTCAATTGCCACAAACTCCAGGTGTTCTGGGCTCTTGACTCAATATGTGATGAAGG 1246 |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct 1202 CATACTCAATTGCCACAAACTCCAGGTGTTCTGGGCCCTTGATTCAATATGTGATGAAGG 1261 Query 1247 ACTACAGGCAGTTGCTGCAACTTGCAAGGAACTCCGTGAACTCCGAATCTTCCCTTTTGA 1306 ||||||||||||||| || |||||||||||||||||||||||| | |||||||||||||| Sbjct 1262 ACTACAGGCAGTTGCAGCCACTTGCAAGGAACTCCGTGAACTCAGGATCTTCCCTTTTGA 1321 Query 1307 TCCTCGGGAAGACAGTGAAGGTCCCGTCTCTGAATTAGGCCTCCAAGCAATCTCTGAGGG 1366 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 1322 TCCTCGGGAAGACAGTGAAGGTCCTGTCTCTGAATTAGGCCTCCAAGCAATCTCCGAGGG 1381 Query 1367 TTGTAGGAAACTAGAATCTATTCTCTACTTTTGCCAGCGCATGACTAATGCTGCCGTGAT 1426 ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct 1382 TTGTAGGAAACTAGAATCTATTCTCTACTTTTGCCAGCGCATGACTAATGCCGCTGTGAT 1441 Query 1427 AGCCATGTCAGAAAACTGTCCTGAGCTTACTGTGTTTAGGCTGTGCATAATGGGTCGACA 1486 |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1442 AGCCATGTCAGAGAACTGTCCAGAGCTTACTGTGTTTAGGCTGTGCATAATGGGTCGACA 1501 Query 1487 TAGGCCTGACCATGTGACAGGGAAGCCTATGGACGAGGGTTTTGGTGCTATTGTTAAAAA 1546 ||||||||||||||| ||||| ||||||||||||||||| |||||||| ||||||||||| Sbjct 1502 TAGGCCTGACCATGTAACAGGAAAGCCTATGGACGAGGGATTTGGTGCCATTGTTAAAAA 1561 Query 1547 CTGCAAGAAGCTAACCCGACTTGCAGTGTCAGGCTTGCTGACAGATCAAGCTTTTAGGTA 1606 ||||||||||||||| || ||||||||||| || |||||||||||||||||||||||||| Sbjct 1562 CTGCAAGAAGCTAACTCGCCTTGCAGTGTCGGGATTGCTGACAGATCAAGCTTTTAGGTA 1621 Query 1607 TATGGGTGAGTATGGGAAATTGGTCCGTACGCTTTCAGTAGCTTTTGCTGGGGATAGTGA 1666 |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct 1622 TATGGGTGAGTATGGGAAATTGGTCCGTACGCTTTCAGTAGCTTTTGCAGGGGACAGTGA 1681 Query 1667 CATGGCTCTGAGACATGTCCTTGAAGGTTGCCCTAGACTGCAAAAACTTGAGATAAGGGA 1726 ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct 1682 CATGGCTCTGAGACATGTCCTAGAAGGTTGCCCTAGACTGCAGAAACTTGAGATAAGGGA 1741 Query 1727 CAGTCCGTTTGGAGATGTTGCGTTACGCTCTGGTATGCATCGTTATTACAACATGAGGTT 1786 |||||| |||||||||||||| ||||| |||||||||||||| ||||||||||||||||| Sbjct 1742 CAGTCCCTTTGGAGATGTTGCATTACGGTCTGGTATGCATCGCTATTACAACATGAGGTT 1801 Query 1787 TGTTTGGATGTCGGCATGTAGCTTGTCAAAGGGATGCTGCAAGGATATTGCACGCGTGAT 1846 |||||||||||| |||||||||||||| |||||||||||||||||||||||||| | || Sbjct 1802 TGTTTGGATGTCAGCATGTAGCTTGTCTAAGGGATGCTGCAAGGATATTGCACGAGCAAT 1861 Query 1847 GCCGAATCTAGTTGTGGAAGTAATTGGGTCAGATGATGATGACGACAATAGGGATTATGT 1906 ||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||| Sbjct 1862 GCCGAATCTAGTTGTGGAAGTAATTGGATCGGATGATGATGATGACAATAGGGATTATGT 1921 Query 1907 TGAGACTTTATACATGTATCGGTCTCTTGATGGTCCAAGAAATGATGCACCAAAGTTCGT 1966 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1922 CGAGACTTTATACATGTATCGGTCTCTTGATGGTCCAAGGAATGATGCACCAAAGTTCGT 1981 Query 1967 CACGATTTTATAGAACGAGGTGCATTTCCGTGTTACCGATTTTTAAGAAGGGGAGTGAAA 2026 |||||||||||||||||||| ||||||||||||| ||| ||||||||| ||| | ||||| Sbjct 1982 CACGATTTTATAGAACGAGGAGCATTTCCGTGTTTCCGTTTTTTAAGACGGGAA-TGAAA 2040 Query 2027 TGGGTAGGTGTAGGAGGCTCAAatgatgatgatgatgatggtgtcatcagaggcacacta 2086 |||||| |||||||| ||||| |||||||||| | ||||| |||||||||||||||| Sbjct 2041 TGGGTAAGTGTAGGAAGCTCA---GATGATGATG--G-TGGTGGCATCAGAGGCACACTA 2094 Query 2087 catgattgttgttgatgatgtgatgatgatgatgG---TTGGGAGGAATGCAAGATTGTT 2143 ||||||||||| |||||| ||||| || | ||| |||||||||||||||||||||| Sbjct 2095 CATGATTGTTGATGATGAA-TGATGGTGGT--TGGGACTTGGGAGGAATGCAAGATTGTT 2151 Query 2144 GTATCATTAttttctttttt-atttttGGGTTTAAAAGATCTTATTTGGTTGGTTAGGTG 2202 |||||||||||||||||||| ||||||||||| ||||||| |||||||| |||||||||| Sbjct 2152 GTATCATTATTTTCTTTTTTTATTTTTGGGTTCAAAAGATGTTATTTGGGTGGTTAGGTG 2211 Query 2203 GAACAATGGATGTATGTTTTGGGAGAAACAGTGTTAGTT-G---G-T---T-----CTAA 2249 ||||| ||||||||||||||||||| | | ||||||||| | | | | |||| Sbjct 2212 GAACAGTGGATGTATGTTTTGGGAGCATCGGTGTTAGTTAGACAGCTGAGTTGGTTCTAA 2271 Query 2250 TAAGCTGCACTTTTGGCTCTCTCTAGTTGTTGTTGTTGAGAAACTAATGAGACATTTCTC 2309 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 2272 TAAGCTGCACTTTTGGCTCTCTCTAGTTGTTGTTGTTGAGAAACTAATGAGACATCTCTC 2331 Query 2310 T 2310 | Sbjct 2332 T 2332 > AT4G24390.2 | Symbols: | RNI-like superfamily protein | chr4:12613590-12616117 REVERSE LENGTH=2342 Length=2342 Score = 1456 bits (788), Expect = 0.0 Identities = 1439/1747 (82%), Gaps = 69/1747 (4%) Strand=Plus/Plus Query 276 CATGTTCTCGAAAACGTTCTT-GAGAACGTTCTTCAGTTCCTAGA-TTCAAGATGTGACC 333 ||||| || || |||||| || |||||||| ||||||||||| | ||| ||||| || | Sbjct 308 CATGTCCTTGAGAACGTT-TTAGAGAACGTGCTTCAGTTCCT-CACTTCCAGATGCGATC 365 Query 334 GTAACGCTGCT-TCTTTAGTTTGCAAATCTTGGTGGCGTGTTGAAGCTTTGACTCGATCT 392 | ||||| | | || || || |||| ||| |||| || || || ||| |||||||| | Sbjct 366 GCAACGCAG-TCTCATTGGTCTGCAGATCGTGGTATCGCGTCGAGGCTCAGACTCGAT-T 423 Query 393 -GAGGTTTTTATTGGTAACTGTTACGCTCTTTCTCCGGCGAGG-TTGACTCAGAGATTCA 450 |||||||||||||| ||||||||| | || ||||| || || || | ||| | |||| Sbjct 424 AGAGGTTTTTATTGGAAACTGTTACTCGCTCTCTCCTGCTCGGCTT-ATTCACCGGTTCA 482 Query 451 AGCGTGTTAGGTCACTTGTGCTTAAAGGGAAACCTAGGTTTGCTGATTTCAATCTCATGC 510 ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 483 AGCGTGTTAGGTCTCTTGTGCTTAAAGGGAAACCTAGGTTTGCTGATTTTAATCTCATGC 542 Query 511 CTCCTGATTGGGGTGCT-AATTTTGCTCCTTGGGTTTCTACTATGGCTAAAGCTTATCCT 569 ||||| ||||||| ||| |||| | ||||||||||| || ||| ||||| ||||||||| Sbjct 543 CTCCTAATTGGGGAGCTCAATTCT-CTCCTTGGGTTGCTGCTACAGCTAAGGCTTATCCT 601 Query 570 TGGCTTGAGAAAGTTGATTTGAAAAGGATGTTTGTTACTGATGATGATTTAGCTCTTCTT 629 ||||| ||||| ||| ||||||| | ||||||||||| ||||||||||| ||||||||| Sbjct 602 TGGCTCGAGAAGGTTCATTTGAAGCGTATGTTTGTTACGGATGATGATTTGGCTCTTCTT 661 Query 630 GCTGACTCTTTTCCTGGGTTTAAAGAGCTTATC-TTGGTTTGTTGTGAAGGTTTTGGTAC 688 ||||| || ||||||||||| |||||||||| | ||||| || |||||||||||||| || Sbjct 662 GCTGAGTCGTTTCCTGGGTTCAAAGAGCTTA-CTTTGGTCTGCTGTGAAGGTTTTGGGAC 720 Query 689 TAGTGGTATTGCTATTGTTACCAATAAGTGCAGAAAGCTGAAA-GTGCTTGATTTGATTG 747 ||||||||||||||||||| | || || ||||| |||| ||| || ||||||||||| | Sbjct 721 TAGTGGTATTGCTATTGTTGCTAACAAATGCAGGCAGCT-AAAGGTCCTTGATTTGATGG 779 Query 748 AGTCTGAGGTTACGGATGATGAAG-TGGATTGGATTTCTTGTTTCCCTGAGGATGTAACT 806 |||| || || || ||||||| || ||||||||||||||||||| ||||||| || |||| Sbjct 780 AGTCAGAAGTCACAGATGATG-AGTTGGATTGGATTTCTTGTTTTCCTGAGGGTGAAACT 838 Query 807 -AGTCTTGAATCTTTAG-CTTTTGACTGTGTGGAAGCTCCTATCAATTTTAAGGCGCTT- 863 | ||| || ||||| | ||||||||||||| ||| | ||||||||||| ||||| || Sbjct 839 CA-TCTGGAGTCTTT-GTCTTTTGACTGTGTTGAATCCCCTATCAATTTCAAGGC-ATTG 895 Query 864 GAGG-GTCTTGTTGCTAGGTCACCGTTCTTGAAGAAACTTAG-GCTGAACAGGTTTGTGT 921 |||| | || || | ||||||||| ||||||||||||||||| | |||||||||||| | Sbjct 896 GAGGAG-CTCGTGGTTAGGTCACCATTCTTGAAGAAACTTAGAAC-GAACAGGTTTGTTT 953 Query 922 CCCTTGTGGAGCTACATCGTCTGCTACTTGGAGCTCCACAGCTT-ACTAGTCTTGGGACA 980 |||||| ||||| ||||| || | || |||| || ||| || || ||||||||||| Sbjct 954 CCCTTGAAGAGCTGCATCGACTAATGGTTCGAGCGCCGCAG-TTAACGAGTCTTGGGACG 1012 Query 981 GGTTCATTTAG-CCATGATGAGGAACCTC-GGAGTGAGCAAGAACCAGATTATGCTGCTG 1038 || |||||||| ||| || | | |||| || | || ||| |||| |||||||| |||| Sbjct 1013 GGGTCATTTAGTCCA-GACAATGTGCCTCAGG-GAGAACAACAACCGGATTATGCAGCTG 1070 Query 1039 CATTTCGTGCTTGTAAATCTGTTGTTTGCCTGTCAGGATTTAGGGAGTTGATG-CCGGAG 1097 | ||||||||||||||||| | ||||| || |||||||| ||||| || | | ||||| Sbjct 1071 CTTTTCGTGCTTGTAAATCCATAGTTTGTCTCTCAGGATTCAGGGAATTTA-GACCGGAA 1129 Query 1098 TATCTTCC-AGCTATCT-TTCCGGTGTGCGCTAATCTCACTTC-CTTGAACTTCAGTTAT 1154 || | ||| ||| |||| || | || || ||||||||||| || ||| |||||||||||| Sbjct 1130 TA-CCTCCTAGCCATCTCTT-CAGTTTGTGCTAATCTCACCTCTCTT-AACTTCAGTTAT 1186 Query 1155 GCTAATATTTCTCCTGACATGTTTAAGCCCATCATACTCAATTGCCACAA-ACTCCAG-G 1212 ||||| ||||||||| ||||| | |||||||||||| ||| || ||||| | ||| | | Sbjct 1187 GCTAACATTTCTCCTCACATGCTCAAGCCCATCATAAGCAACTGTCACAATA-TCC-GAG 1244 Query 1213 TGTTCTGGGCTCTTGACTCAATATGTGATGAAGGACTACAGGCAGTTGCTGCAACTTGCA 1272 | ||||||||||||||||| ||| |||||||||||||||||||||| ||||| || |||| Sbjct 1245 TCTTCTGGGCTCTTGACTCGATACGTGATGAAGGACTACAGGCAGTGGCTGCCACATGCA 1304 Query 1273 AGGAACTCCGTGAACTCCGAATCTTCCCTTTTGATCCTCGGGAAGACAGTGAAGGTCCCG 1332 |||| |||||||| || || || ||||||||||||||||| ||||||||||||||||| | Sbjct 1305 AGGAGCTCCGTGAGCTTCGGATTTTCCCTTTTGATCCTCGTGAAGACAGTGAAGGTCCTG 1364 Query 1333 TCTCTGAATTAGGCCTCCAAGCAATCTCTGAGGGTTGTAGGAAACTAGAATCTATTCTCT 1392 |||| | | |||||||||||||||| || ||||| ||||||||||| |||||||| || | Sbjct 1365 TCTCGGGAGTAGGCCTCCAAGCAATTTCAGAGGGCTGTAGGAAACTGGAATCTATCCTGT 1424 Query 1393 ACTTTTGCCAGCGCATGACTAATGCTGCCGTGATAGCCATGTCAGAAAACTGTCCTG-AG 1451 ||||||||||| ||||| |||| || |||| ||||||||| || ||||| || | || Sbjct 1425 ACTTTTGCCAGAATATGACCAATGGAGCTGTGACAGCCATGTCGGAGAACTG-CCCGCAG 1483 Query 1452 CTTACTGTGTTTAGGCTGTGCATAATGGGTCGACATAGGCCTGACCATGTGACAGGGAAG 1511 |||||||||||||| || |||||||||||||| |||||||||||||| |||||||| ||| Sbjct 1484 CTTACTGTGTTTAGACTTTGCATAATGGGTCGCCATAGGCCTGACCACGTGACAGGAAAG 1543 Query 1512 CCTATGGACGAGGGTTTTGGTGCTATTGTTAAAAACTGCAAGAAGCTAACCCGACTTGCA 1571 || |||||||| || |||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1544 CCAATGGACGATGGATTTGGTGCCATTGTTAAAAACTGCAAGAAGCTAACCCGACTTGCA 1603 Query 1572 GTGTCAGGCTTGCTGACAGATCAAGCTTTTAGGTATATGGGTGAGTATGGGAAATTGGTC 1631 || ||||| || || |||||| |||||||||| ||||| || || |||||||||||| || Sbjct 1604 GTATCAGGGTTACTAACAGATGAAGCTTTTAGCTATATAGGAGAATATGGGAAATTGATC 1663 Query 1632 CGTACGCTTTCAGTAGCTTTTGCTGGGGATAGTGACATGGCTCTGAGACATGTCCTTGAA 1691 |||||||| || ||||| ||||||||| | ||||||| |||||||||| | || ||||| Sbjct 1664 CGTACGCTATCTGTAGCGTTTGCTGGGAACAGTGACAAGGCTCTGAGATACGTTCTTGAG 1723 Query 1692 GGTTGCCCTAGACTGCAAAAACTTGAGATAAGGGACAGTCCGTTTGGAGATGTTGCG-TT 1750 ||||| |||| ||| ||||| |||||||| ||||||||||| ||||||||||||| | || Sbjct 1724 GGTTGTCCTAAACTACAAAAGCTTGAGATCAGGGACAGTCCCTTTGGAGATGTTG-GATT 1782 Query 1751 ACGCTCTGGTATGCATCGTTATTACAACATGAGGTTTGTTTGGATGTCGGCATGTAGCTT 1810 ||||||||||||||||| |||| ||| ||||||||||||||| ||||| ||||| | | Sbjct 1783 GCGCTCTGGTATGCATCGGTATTCCAATATGAGGTTTGTTTGGTTGTCGTCATGTCTCAT 1842 Query 1811 GTCAAAG-GGATGCTGCAAGGATATTGCAC--GCGTGATGCCGAATCTAGTTGTGGAAGT 1867 || | ||| |||||| || | || | | || | |||| ||| |||| |||||||| Sbjct 1843 ATCCC-GTGGAGGCTGCAGGGGTGTTTCTCATGC-TC-TGCCTAATGTAGTCGTGGAAGT 1899 Query 1868 AATTGG-GTC-A-GATGATGATGACGAC-A-A-T---A--GGG-ATTATGTTGAGACTTT 1915 | |||| | | | | |||||||||||| | | | | ||| ||||||||||||| || Sbjct 1900 ATTTGGAGCCGATGGTGATGATGACGAAGACACTGTCACTGGGGATTATGTTGAGACATT 1959 Query 1916 ATACATGTATCGGTCTCTTGATGGTCCAAGAAATGATGCACCAAAGTTCGTCACGATTTT 1975 ||| ||||||| || |||||||| ||||| || ||||| |||||||| || || ||||| Sbjct 1960 GTACTTGTATCGATCCCTTGATGGCCCAAGGAAGGATGCTCCAAAGTTTGTAACAATTTT 2019 Query 1976 AT-AGAA 1981 || |||| Sbjct 2020 ATGAGAA 2026 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 114658044780 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5