BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg495057
Length=1590
Score E
Sequences producing significant alignments: (Bits) Value
AT5G50012.1 | Symbols: CPuORF36 | conserved peptide upstream op... 1703 0.0
AT5G50011.1 | Symbols: CPuORF37 | conserved peptide upstream op... 1703 0.0
AT5G50010.1 | Symbols: | sequence-specific DNA binding transcr... 1703 0.0
> AT5G50012.1 | Symbols: CPuORF36 | conserved peptide upstream
open reading frame 36 | chr5:20348615-20350830 FORWARD LENGTH=1858
Length=1858
Score = 1703 bits (922), Expect = 0.0
Identities = 1350/1541 (88%), Gaps = 91/1541 (6%)
Strand=Plus/Plus
Query 1 CAAAGCAATAACATGCGGTGGTGGTTGAGTCTTTCTGCTTATGTTTTTCGTAC---ACTA 57
|||||||| | |||||||||||||||| ||||||||||||||||||||||||| | ||
Sbjct 121 CAAAGCAACAGCATGCGGTGGTGGTTGTGTCTTTCTGCTTATGTTTTTCGTACAGTAGTA 180
Query 58 GTCTTCTGTCGTGTGATTCTGTAAACTGAGATCTTGCTTTAGACACAGCTCTTTTTCTTT 117
|||||||||||||||||||||||||||| |||||| ||| ||||| || | | |||
Sbjct 181 GTCTTCTGTCGTGTGATTCTGTAAACTGCGATCTTACTTCAGACATAG--C----T-TTT 233
Query 118 GTGTGTGTAATGGGGTGGTCTTCTTTTTTCTTCACAGTCCATTGCTTTGTCCGCCAAATT 177
| | |||||| || |||| ||||||||||||||| ||| || ||||||||||||||||
Sbjct 234 -T-TATGTAAT--GG-GGTCGTCTTTTTTCTTCACATTCCCTTACTTTGTCCGCCAAATT 288
Query 178 ATTTGAGATAC-TCTTTTGGATACTCTGTTTT-GG-TAAGGAATCAGTTGGTGAGAAAGT 234
|||| | | || || ||||||||||||||||| || |||||||||||||| ||||||||
Sbjct 289 ATTT-A-AGACTTCGTTTGGATACTCTGTTTTGGGAGAAGGAATCAGTTGGGGAGAAAGT 346
Query 235 AGTTATGGTTTGTCAATCAGCGGGACAGACAAGATTTCGAACACTCAAACACGAACACGG 294
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 347 AGTTATGGTTTGTCAATCAGCGGGACAGACAAGATTTCGTACACTCAAACACGAACACGG 406
Query 295 TATCTCAGGAAACATAGTAGTTAGAGTCATTGCATGCTTTCAACCTCTCCAAGATTGCCA 354
|||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 407 TATCACAGGAAACATTGTAGTTAGAGTCATTGCATGCTTTCAACCTCTCCAAGATTGCCA 466
Query 355 GGCTGAATATTTTCGTCAATTGTTGAAGCCCGTCACGTAGAGTAGCTGGATATTTCTCCT 414
|||||||||||| |||||||||||||||||||||||||||||||||| |||| || || |
Sbjct 467 GGCTGAATATTTCCGTCAATTGTTGAAGCCCGTCACGTAGAGTAGCTCGATACTTATCGT 526
Query 415 TCTTATTTCAAGCCTTAGTTTCtt-tttttATTCATTTATTGATTTGTTTAGTGTTGGAT 473
|||| ||||||||| ||||||||| | | ||| | || |||||||||||||||||||||
Sbjct 527 TCTTGTTTCAAGCC-TAGTTTCTTCTATCCATTTAGTTGTTGATTTGTTTAGTGTTGGAT 585
Query 474 GGGACAAGATCGT-GGTTTGTGGTTTCCTAGTCAGCGGTTGAGCTCATTGACTTCCCTAC 532
||||||||||||| |||||| ||||||||| |||||| ||| | || ||| ||||||||
Sbjct 586 GGGACAAGATCGTGGGTTTG-GGTTTCCTACTCAGCGCTTGTGTTCCTTGTCTTCCCTAG 644
Query 533 CTCTGTCTCATCTCGGGAATCAAGACTTG-----A--ATC-----CATGC-G-G------ 572
||||||||||||||||||| ||||||||| | ||| | ||| | |
Sbjct 645 CTCTGTCTCATCTCGGGAAGCAAGACTTGAATTTAGTATCTAAAACCTGCGGCGACACCA 704
Query 573 -CGACATGTTTTCTACTCGTGGATCTTATCAAGTTTCT-----A----CTCAATCCTATT 622
||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct 705 CCGACATGTTTTCTACTCGTGGATCTTATCAAGTTTCTACCCAAGTCTCTCAATCCTATT 764
Query 623 TTGATGGCTCTTATGGTTGGGTTCATGGACCATCCCACTTGCAGCAGCAGTTCTTGCCTC 682
||||||| | || ||| ||||||||||| |||||||| | |||||||||||||||||||
Sbjct 765 TTGATGGGTATTGTGGATGGGTTCATGGGTCATCCCACCTACAGCAGCAGTTCTTGCCTC 824
Query 683 CTCTAAATAAATGTATGAAGCATGTACCTCTTAAAGTAGACGGTTTTATATCTAAAGCTG 742
||| ||| ||||||||||||| ||||||||| ||||||||||| |||||||||||||||
Sbjct 825 CTCAAAACCAATGTATGAAGCAAGTACCTCTTCAAGTAGACGGTGTTATATCTAAAGCTG 884
Query 743 ATGGCGGTCAATGTAGTCAGAAGAGGTTCCTTGTGTTTGATCAGTCTGGTGATCCGACGA 802
| | | ||||||||||||||||||||||| ||||||||||||||||| |||| |||||
Sbjct 885 A--G-GAACAATGTAGTCAGAAGAGGTTCCTAGTGTTTGATCAGTCTGGAGATCAGACGA 941
Query 803 CTCTGCTTGTTACTTCCGATATCCGGAAATCTTTTGAGACCCTGAAACAGCCTGTCTGTC 862
|| |||| | |||||||||| |||||||||||||||||||| ||||||| || |||||
Sbjct 942 CTTTGCTACTCGCTTCCGATATACGGAAATCTTTTGAGACCCTAAAACAGCATGCCTGTC 1001
Query 863 CTGATATGAAGGAAGAAATCCAAAGAAGCAACAAAGATTTGTTTGTTTGTCAAGGAATGC 922
|||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||
Sbjct 1002 CTGATATGAAGGAAGAGCTCCAAAGAAGCAACAAAGATTTGTTTGTTTGTCACGGAATGC 1061
Query 923 ATGGAAATAGCGAACCGGATTTGAAGGAGGATACGGAAGAACTAAATGC-TCTGCTTTAC 981
| |||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||
Sbjct 1062 AAGGAAATAGCGAACCGGATTTGAAGGAGGATTCGGAAGAACTAAATGCAT-TGCTTTAC 1120
Query 982 TCGGAAGGTGAGAGTGATTATTGTTCTGAAGAAGATGAGGTTACAAGCTCAGACCATTCC 1041
|| |||| |||||||| |||||| |||||||||||||||||||||||| |||||||||||
Sbjct 1121 TCTGAAGATGAGAGTGGTTATTGCTCTGAAGAAGATGAGGTTACAAGCGCAGACCATTCC 1180
Query 1042 CCAAGCATTGTAGTATCAGCCCATGAGGGCCAAAAAGCATTTCTTGGAAGCTATGGACAA 1101
||||||||||||||||||| || ||||| ||||||| |||||||||||||||||||||||
Sbjct 1181 CCAAGCATTGTAGTATCAGGCCGTGAGGACCAAAAAACATTTCTTGGAAGCTATGGACAA 1240
Query 1102 TCATTAAATGCTAAAAAGAGAAAGACACTCGAAACCTCGAATGAGAATATGCGGGACGCT 1161
|||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct 1241 CCATTAAATGCTAAAAAGAGAAAGATACTCGAAACCTCGAATGAGAGTATGCGGGACGCT 1300
Query 1162 GAATCGAGCTGTGGTAGTTGTGACAATGACAACACAGGGATTAGTTT-CTTAAAACGTTC 1220
|||||||||||||||||||||||||| || || ||| |||||||| || ||| |||||
Sbjct 1301 GAATCGAGCTGTGGTAGTTGTGACAA---CA-CA-AGG-ATTAGTTTTCTGAAA-CGTTC 1353
Query 1221 AAAGAC-GTCTAGCAAGAAGATAGGAGAAGAGAAGATATTTGAGACTGTAAGCCTTTTGC 1279
||| | |||||| || |||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1354 TAAG-CTGTCTAGTAACAAGATAGGAGAAGAGAAGATATTTGAGACTGTAAGCCTCTTGC 1412
Query 1280 GCAGTATAGTCCCCGGGGAGGAACTGGCGGACCCGATCTTAGTCATCGATAGAGCCATTG 1339
||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1413 GCAGTGTAGTCCCCGGGGAGGAACTGGTGGACCCGATCTTAGTCATCGATAGAGCCATTG 1472
Query 1340 ATTACCTGAAATCATTGAAGATGGAAGTC-AAAAATCGAGGA-CATG-GGACTCTTTGTT 1396
||||||| ||||||||||||||||||| | |||||||||| | |||| || ||||||||
Sbjct 1473 ATTACCTTAAATCATTGAAGATGGAAG-CGAAAAATCGAGAAGCATGAGGT-TCTTTGTT 1530
Query 1397 TGCATGATA--T----C-TA--AG-A--G-----TGGACTTGTTTTCTAAACAAAGTAGT 1439
|| | |||| | | || || | | |||||||| |||||||||||||||||
Sbjct 1531 TGTAGGATACCTAAGACATATTAGCATTGGCAAGTGGACTTGGTTTCTAAACAAAGTAGT 1590
Query 1440 AGACATATTGGACCATGGTACTCTTGTCAAGCTACAAAGGG 1480
|||||||||||||| ||||||||||||||||||||||||||
Sbjct 1591 AGACATATTGGACCGTGGTACTCTTGTCAAGCTACAAAGGG 1631
Score = 119 bits (64), Expect = 1e-25
Identities = 102/119 (86%), Gaps = 8/119 (7%)
Strand=Plus/Plus
Query 1480 GGAGTTGCGAGAGAAGGAATCG-GATTAATATGCAAATTG-A-A--T-AT-TT-GTTGAT 1531
|||||||| ||||||||||| | ||||| |||||||||| | | | || || ||||||
Sbjct 1674 GGAGTTGCAAGAGAAGGAATTGATATTAAAATGCAAATTGAATATTTCATATTAGTTGAT 1733
Query 1532 GATTAAGCTGGATTGATAAATTTTTATTTTAGTCGTTTAGCTGTTTGTTATATCATGTA 1590
||||||| ||||||| ||||||| |||| |||||||||||||||||||||||||||||
Sbjct 1734 GATTAAGATGGATTGCGAAATTTTAATTTCAGTCGTTTAGCTGTTTGTTATATCATGTA 1792
> AT5G50011.1 | Symbols: CPuORF37 | conserved peptide upstream
open reading frame 37 | chr5:20348615-20350830 FORWARD LENGTH=1858
Length=1858
Score = 1703 bits (922), Expect = 0.0
Identities = 1350/1541 (88%), Gaps = 91/1541 (6%)
Strand=Plus/Plus
Query 1 CAAAGCAATAACATGCGGTGGTGGTTGAGTCTTTCTGCTTATGTTTTTCGTAC---ACTA 57
|||||||| | |||||||||||||||| ||||||||||||||||||||||||| | ||
Sbjct 121 CAAAGCAACAGCATGCGGTGGTGGTTGTGTCTTTCTGCTTATGTTTTTCGTACAGTAGTA 180
Query 58 GTCTTCTGTCGTGTGATTCTGTAAACTGAGATCTTGCTTTAGACACAGCTCTTTTTCTTT 117
|||||||||||||||||||||||||||| |||||| ||| ||||| || | | |||
Sbjct 181 GTCTTCTGTCGTGTGATTCTGTAAACTGCGATCTTACTTCAGACATAG--C----T-TTT 233
Query 118 GTGTGTGTAATGGGGTGGTCTTCTTTTTTCTTCACAGTCCATTGCTTTGTCCGCCAAATT 177
| | |||||| || |||| ||||||||||||||| ||| || ||||||||||||||||
Sbjct 234 -T-TATGTAAT--GG-GGTCGTCTTTTTTCTTCACATTCCCTTACTTTGTCCGCCAAATT 288
Query 178 ATTTGAGATAC-TCTTTTGGATACTCTGTTTT-GG-TAAGGAATCAGTTGGTGAGAAAGT 234
|||| | | || || ||||||||||||||||| || |||||||||||||| ||||||||
Sbjct 289 ATTT-A-AGACTTCGTTTGGATACTCTGTTTTGGGAGAAGGAATCAGTTGGGGAGAAAGT 346
Query 235 AGTTATGGTTTGTCAATCAGCGGGACAGACAAGATTTCGAACACTCAAACACGAACACGG 294
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 347 AGTTATGGTTTGTCAATCAGCGGGACAGACAAGATTTCGTACACTCAAACACGAACACGG 406
Query 295 TATCTCAGGAAACATAGTAGTTAGAGTCATTGCATGCTTTCAACCTCTCCAAGATTGCCA 354
|||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 407 TATCACAGGAAACATTGTAGTTAGAGTCATTGCATGCTTTCAACCTCTCCAAGATTGCCA 466
Query 355 GGCTGAATATTTTCGTCAATTGTTGAAGCCCGTCACGTAGAGTAGCTGGATATTTCTCCT 414
|||||||||||| |||||||||||||||||||||||||||||||||| |||| || || |
Sbjct 467 GGCTGAATATTTCCGTCAATTGTTGAAGCCCGTCACGTAGAGTAGCTCGATACTTATCGT 526
Query 415 TCTTATTTCAAGCCTTAGTTTCtt-tttttATTCATTTATTGATTTGTTTAGTGTTGGAT 473
|||| ||||||||| ||||||||| | | ||| | || |||||||||||||||||||||
Sbjct 527 TCTTGTTTCAAGCC-TAGTTTCTTCTATCCATTTAGTTGTTGATTTGTTTAGTGTTGGAT 585
Query 474 GGGACAAGATCGT-GGTTTGTGGTTTCCTAGTCAGCGGTTGAGCTCATTGACTTCCCTAC 532
||||||||||||| |||||| ||||||||| |||||| ||| | || ||| ||||||||
Sbjct 586 GGGACAAGATCGTGGGTTTG-GGTTTCCTACTCAGCGCTTGTGTTCCTTGTCTTCCCTAG 644
Query 533 CTCTGTCTCATCTCGGGAATCAAGACTTG-----A--ATC-----CATGC-G-G------ 572
||||||||||||||||||| ||||||||| | ||| | ||| | |
Sbjct 645 CTCTGTCTCATCTCGGGAAGCAAGACTTGAATTTAGTATCTAAAACCTGCGGCGACACCA 704
Query 573 -CGACATGTTTTCTACTCGTGGATCTTATCAAGTTTCT-----A----CTCAATCCTATT 622
||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct 705 CCGACATGTTTTCTACTCGTGGATCTTATCAAGTTTCTACCCAAGTCTCTCAATCCTATT 764
Query 623 TTGATGGCTCTTATGGTTGGGTTCATGGACCATCCCACTTGCAGCAGCAGTTCTTGCCTC 682
||||||| | || ||| ||||||||||| |||||||| | |||||||||||||||||||
Sbjct 765 TTGATGGGTATTGTGGATGGGTTCATGGGTCATCCCACCTACAGCAGCAGTTCTTGCCTC 824
Query 683 CTCTAAATAAATGTATGAAGCATGTACCTCTTAAAGTAGACGGTTTTATATCTAAAGCTG 742
||| ||| ||||||||||||| ||||||||| ||||||||||| |||||||||||||||
Sbjct 825 CTCAAAACCAATGTATGAAGCAAGTACCTCTTCAAGTAGACGGTGTTATATCTAAAGCTG 884
Query 743 ATGGCGGTCAATGTAGTCAGAAGAGGTTCCTTGTGTTTGATCAGTCTGGTGATCCGACGA 802
| | | ||||||||||||||||||||||| ||||||||||||||||| |||| |||||
Sbjct 885 A--G-GAACAATGTAGTCAGAAGAGGTTCCTAGTGTTTGATCAGTCTGGAGATCAGACGA 941
Query 803 CTCTGCTTGTTACTTCCGATATCCGGAAATCTTTTGAGACCCTGAAACAGCCTGTCTGTC 862
|| |||| | |||||||||| |||||||||||||||||||| ||||||| || |||||
Sbjct 942 CTTTGCTACTCGCTTCCGATATACGGAAATCTTTTGAGACCCTAAAACAGCATGCCTGTC 1001
Query 863 CTGATATGAAGGAAGAAATCCAAAGAAGCAACAAAGATTTGTTTGTTTGTCAAGGAATGC 922
|||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||
Sbjct 1002 CTGATATGAAGGAAGAGCTCCAAAGAAGCAACAAAGATTTGTTTGTTTGTCACGGAATGC 1061
Query 923 ATGGAAATAGCGAACCGGATTTGAAGGAGGATACGGAAGAACTAAATGC-TCTGCTTTAC 981
| |||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||
Sbjct 1062 AAGGAAATAGCGAACCGGATTTGAAGGAGGATTCGGAAGAACTAAATGCAT-TGCTTTAC 1120
Query 982 TCGGAAGGTGAGAGTGATTATTGTTCTGAAGAAGATGAGGTTACAAGCTCAGACCATTCC 1041
|| |||| |||||||| |||||| |||||||||||||||||||||||| |||||||||||
Sbjct 1121 TCTGAAGATGAGAGTGGTTATTGCTCTGAAGAAGATGAGGTTACAAGCGCAGACCATTCC 1180
Query 1042 CCAAGCATTGTAGTATCAGCCCATGAGGGCCAAAAAGCATTTCTTGGAAGCTATGGACAA 1101
||||||||||||||||||| || ||||| ||||||| |||||||||||||||||||||||
Sbjct 1181 CCAAGCATTGTAGTATCAGGCCGTGAGGACCAAAAAACATTTCTTGGAAGCTATGGACAA 1240
Query 1102 TCATTAAATGCTAAAAAGAGAAAGACACTCGAAACCTCGAATGAGAATATGCGGGACGCT 1161
|||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct 1241 CCATTAAATGCTAAAAAGAGAAAGATACTCGAAACCTCGAATGAGAGTATGCGGGACGCT 1300
Query 1162 GAATCGAGCTGTGGTAGTTGTGACAATGACAACACAGGGATTAGTTT-CTTAAAACGTTC 1220
|||||||||||||||||||||||||| || || ||| |||||||| || ||| |||||
Sbjct 1301 GAATCGAGCTGTGGTAGTTGTGACAA---CA-CA-AGG-ATTAGTTTTCTGAAA-CGTTC 1353
Query 1221 AAAGAC-GTCTAGCAAGAAGATAGGAGAAGAGAAGATATTTGAGACTGTAAGCCTTTTGC 1279
||| | |||||| || |||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1354 TAAG-CTGTCTAGTAACAAGATAGGAGAAGAGAAGATATTTGAGACTGTAAGCCTCTTGC 1412
Query 1280 GCAGTATAGTCCCCGGGGAGGAACTGGCGGACCCGATCTTAGTCATCGATAGAGCCATTG 1339
||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1413 GCAGTGTAGTCCCCGGGGAGGAACTGGTGGACCCGATCTTAGTCATCGATAGAGCCATTG 1472
Query 1340 ATTACCTGAAATCATTGAAGATGGAAGTC-AAAAATCGAGGA-CATG-GGACTCTTTGTT 1396
||||||| ||||||||||||||||||| | |||||||||| | |||| || ||||||||
Sbjct 1473 ATTACCTTAAATCATTGAAGATGGAAG-CGAAAAATCGAGAAGCATGAGGT-TCTTTGTT 1530
Query 1397 TGCATGATA--T----C-TA--AG-A--G-----TGGACTTGTTTTCTAAACAAAGTAGT 1439
|| | |||| | | || || | | |||||||| |||||||||||||||||
Sbjct 1531 TGTAGGATACCTAAGACATATTAGCATTGGCAAGTGGACTTGGTTTCTAAACAAAGTAGT 1590
Query 1440 AGACATATTGGACCATGGTACTCTTGTCAAGCTACAAAGGG 1480
|||||||||||||| ||||||||||||||||||||||||||
Sbjct 1591 AGACATATTGGACCGTGGTACTCTTGTCAAGCTACAAAGGG 1631
Score = 119 bits (64), Expect = 1e-25
Identities = 102/119 (86%), Gaps = 8/119 (7%)
Strand=Plus/Plus
Query 1480 GGAGTTGCGAGAGAAGGAATCG-GATTAATATGCAAATTG-A-A--T-AT-TT-GTTGAT 1531
|||||||| ||||||||||| | ||||| |||||||||| | | | || || ||||||
Sbjct 1674 GGAGTTGCAAGAGAAGGAATTGATATTAAAATGCAAATTGAATATTTCATATTAGTTGAT 1733
Query 1532 GATTAAGCTGGATTGATAAATTTTTATTTTAGTCGTTTAGCTGTTTGTTATATCATGTA 1590
||||||| ||||||| ||||||| |||| |||||||||||||||||||||||||||||
Sbjct 1734 GATTAAGATGGATTGCGAAATTTTAATTTCAGTCGTTTAGCTGTTTGTTATATCATGTA 1792
> AT5G50010.1 | Symbols: | sequence-specific DNA binding transcription
factors;transcription regulators | chr5:20348615-20350830
FORWARD LENGTH=1858
Length=1858
Score = 1703 bits (922), Expect = 0.0
Identities = 1350/1541 (88%), Gaps = 91/1541 (6%)
Strand=Plus/Plus
Query 1 CAAAGCAATAACATGCGGTGGTGGTTGAGTCTTTCTGCTTATGTTTTTCGTAC---ACTA 57
|||||||| | |||||||||||||||| ||||||||||||||||||||||||| | ||
Sbjct 121 CAAAGCAACAGCATGCGGTGGTGGTTGTGTCTTTCTGCTTATGTTTTTCGTACAGTAGTA 180
Query 58 GTCTTCTGTCGTGTGATTCTGTAAACTGAGATCTTGCTTTAGACACAGCTCTTTTTCTTT 117
|||||||||||||||||||||||||||| |||||| ||| ||||| || | | |||
Sbjct 181 GTCTTCTGTCGTGTGATTCTGTAAACTGCGATCTTACTTCAGACATAG--C----T-TTT 233
Query 118 GTGTGTGTAATGGGGTGGTCTTCTTTTTTCTTCACAGTCCATTGCTTTGTCCGCCAAATT 177
| | |||||| || |||| ||||||||||||||| ||| || ||||||||||||||||
Sbjct 234 -T-TATGTAAT--GG-GGTCGTCTTTTTTCTTCACATTCCCTTACTTTGTCCGCCAAATT 288
Query 178 ATTTGAGATAC-TCTTTTGGATACTCTGTTTT-GG-TAAGGAATCAGTTGGTGAGAAAGT 234
|||| | | || || ||||||||||||||||| || |||||||||||||| ||||||||
Sbjct 289 ATTT-A-AGACTTCGTTTGGATACTCTGTTTTGGGAGAAGGAATCAGTTGGGGAGAAAGT 346
Query 235 AGTTATGGTTTGTCAATCAGCGGGACAGACAAGATTTCGAACACTCAAACACGAACACGG 294
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 347 AGTTATGGTTTGTCAATCAGCGGGACAGACAAGATTTCGTACACTCAAACACGAACACGG 406
Query 295 TATCTCAGGAAACATAGTAGTTAGAGTCATTGCATGCTTTCAACCTCTCCAAGATTGCCA 354
|||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 407 TATCACAGGAAACATTGTAGTTAGAGTCATTGCATGCTTTCAACCTCTCCAAGATTGCCA 466
Query 355 GGCTGAATATTTTCGTCAATTGTTGAAGCCCGTCACGTAGAGTAGCTGGATATTTCTCCT 414
|||||||||||| |||||||||||||||||||||||||||||||||| |||| || || |
Sbjct 467 GGCTGAATATTTCCGTCAATTGTTGAAGCCCGTCACGTAGAGTAGCTCGATACTTATCGT 526
Query 415 TCTTATTTCAAGCCTTAGTTTCtt-tttttATTCATTTATTGATTTGTTTAGTGTTGGAT 473
|||| ||||||||| ||||||||| | | ||| | || |||||||||||||||||||||
Sbjct 527 TCTTGTTTCAAGCC-TAGTTTCTTCTATCCATTTAGTTGTTGATTTGTTTAGTGTTGGAT 585
Query 474 GGGACAAGATCGT-GGTTTGTGGTTTCCTAGTCAGCGGTTGAGCTCATTGACTTCCCTAC 532
||||||||||||| |||||| ||||||||| |||||| ||| | || ||| ||||||||
Sbjct 586 GGGACAAGATCGTGGGTTTG-GGTTTCCTACTCAGCGCTTGTGTTCCTTGTCTTCCCTAG 644
Query 533 CTCTGTCTCATCTCGGGAATCAAGACTTG-----A--ATC-----CATGC-G-G------ 572
||||||||||||||||||| ||||||||| | ||| | ||| | |
Sbjct 645 CTCTGTCTCATCTCGGGAAGCAAGACTTGAATTTAGTATCTAAAACCTGCGGCGACACCA 704
Query 573 -CGACATGTTTTCTACTCGTGGATCTTATCAAGTTTCT-----A----CTCAATCCTATT 622
||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct 705 CCGACATGTTTTCTACTCGTGGATCTTATCAAGTTTCTACCCAAGTCTCTCAATCCTATT 764
Query 623 TTGATGGCTCTTATGGTTGGGTTCATGGACCATCCCACTTGCAGCAGCAGTTCTTGCCTC 682
||||||| | || ||| ||||||||||| |||||||| | |||||||||||||||||||
Sbjct 765 TTGATGGGTATTGTGGATGGGTTCATGGGTCATCCCACCTACAGCAGCAGTTCTTGCCTC 824
Query 683 CTCTAAATAAATGTATGAAGCATGTACCTCTTAAAGTAGACGGTTTTATATCTAAAGCTG 742
||| ||| ||||||||||||| ||||||||| ||||||||||| |||||||||||||||
Sbjct 825 CTCAAAACCAATGTATGAAGCAAGTACCTCTTCAAGTAGACGGTGTTATATCTAAAGCTG 884
Query 743 ATGGCGGTCAATGTAGTCAGAAGAGGTTCCTTGTGTTTGATCAGTCTGGTGATCCGACGA 802
| | | ||||||||||||||||||||||| ||||||||||||||||| |||| |||||
Sbjct 885 A--G-GAACAATGTAGTCAGAAGAGGTTCCTAGTGTTTGATCAGTCTGGAGATCAGACGA 941
Query 803 CTCTGCTTGTTACTTCCGATATCCGGAAATCTTTTGAGACCCTGAAACAGCCTGTCTGTC 862
|| |||| | |||||||||| |||||||||||||||||||| ||||||| || |||||
Sbjct 942 CTTTGCTACTCGCTTCCGATATACGGAAATCTTTTGAGACCCTAAAACAGCATGCCTGTC 1001
Query 863 CTGATATGAAGGAAGAAATCCAAAGAAGCAACAAAGATTTGTTTGTTTGTCAAGGAATGC 922
|||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||
Sbjct 1002 CTGATATGAAGGAAGAGCTCCAAAGAAGCAACAAAGATTTGTTTGTTTGTCACGGAATGC 1061
Query 923 ATGGAAATAGCGAACCGGATTTGAAGGAGGATACGGAAGAACTAAATGC-TCTGCTTTAC 981
| |||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||
Sbjct 1062 AAGGAAATAGCGAACCGGATTTGAAGGAGGATTCGGAAGAACTAAATGCAT-TGCTTTAC 1120
Query 982 TCGGAAGGTGAGAGTGATTATTGTTCTGAAGAAGATGAGGTTACAAGCTCAGACCATTCC 1041
|| |||| |||||||| |||||| |||||||||||||||||||||||| |||||||||||
Sbjct 1121 TCTGAAGATGAGAGTGGTTATTGCTCTGAAGAAGATGAGGTTACAAGCGCAGACCATTCC 1180
Query 1042 CCAAGCATTGTAGTATCAGCCCATGAGGGCCAAAAAGCATTTCTTGGAAGCTATGGACAA 1101
||||||||||||||||||| || ||||| ||||||| |||||||||||||||||||||||
Sbjct 1181 CCAAGCATTGTAGTATCAGGCCGTGAGGACCAAAAAACATTTCTTGGAAGCTATGGACAA 1240
Query 1102 TCATTAAATGCTAAAAAGAGAAAGACACTCGAAACCTCGAATGAGAATATGCGGGACGCT 1161
|||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct 1241 CCATTAAATGCTAAAAAGAGAAAGATACTCGAAACCTCGAATGAGAGTATGCGGGACGCT 1300
Query 1162 GAATCGAGCTGTGGTAGTTGTGACAATGACAACACAGGGATTAGTTT-CTTAAAACGTTC 1220
|||||||||||||||||||||||||| || || ||| |||||||| || ||| |||||
Sbjct 1301 GAATCGAGCTGTGGTAGTTGTGACAA---CA-CA-AGG-ATTAGTTTTCTGAAA-CGTTC 1353
Query 1221 AAAGAC-GTCTAGCAAGAAGATAGGAGAAGAGAAGATATTTGAGACTGTAAGCCTTTTGC 1279
||| | |||||| || |||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1354 TAAG-CTGTCTAGTAACAAGATAGGAGAAGAGAAGATATTTGAGACTGTAAGCCTCTTGC 1412
Query 1280 GCAGTATAGTCCCCGGGGAGGAACTGGCGGACCCGATCTTAGTCATCGATAGAGCCATTG 1339
||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1413 GCAGTGTAGTCCCCGGGGAGGAACTGGTGGACCCGATCTTAGTCATCGATAGAGCCATTG 1472
Query 1340 ATTACCTGAAATCATTGAAGATGGAAGTC-AAAAATCGAGGA-CATG-GGACTCTTTGTT 1396
||||||| ||||||||||||||||||| | |||||||||| | |||| || ||||||||
Sbjct 1473 ATTACCTTAAATCATTGAAGATGGAAG-CGAAAAATCGAGAAGCATGAGGT-TCTTTGTT 1530
Query 1397 TGCATGATA--T----C-TA--AG-A--G-----TGGACTTGTTTTCTAAACAAAGTAGT 1439
|| | |||| | | || || | | |||||||| |||||||||||||||||
Sbjct 1531 TGTAGGATACCTAAGACATATTAGCATTGGCAAGTGGACTTGGTTTCTAAACAAAGTAGT 1590
Query 1440 AGACATATTGGACCATGGTACTCTTGTCAAGCTACAAAGGG 1480
|||||||||||||| ||||||||||||||||||||||||||
Sbjct 1591 AGACATATTGGACCGTGGTACTCTTGTCAAGCTACAAAGGG 1631
Score = 119 bits (64), Expect = 1e-25
Identities = 102/119 (86%), Gaps = 8/119 (7%)
Strand=Plus/Plus
Query 1480 GGAGTTGCGAGAGAAGGAATCG-GATTAATATGCAAATTG-A-A--T-AT-TT-GTTGAT 1531
|||||||| ||||||||||| | ||||| |||||||||| | | | || || ||||||
Sbjct 1674 GGAGTTGCAAGAGAAGGAATTGATATTAAAATGCAAATTGAATATTTCATATTAGTTGAT 1733
Query 1532 GATTAAGCTGGATTGATAAATTTTTATTTTAGTCGTTTAGCTGTTTGTTATATCATGTA 1590
||||||| ||||||| ||||||| |||| |||||||||||||||||||||||||||||
Sbjct 1734 GATTAAGATGGATTGCGAAATTTTAATTTCAGTCGTTTAGCTGTTTGTTATATCATGTA 1792
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 78513652380
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5