BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg495093 Length=1652 Score E Sequences producing significant alignments: (Bits) Value AT5G50330.1 | Symbols: | Protein kinase superfamily protein | ... 2560 0.0 AT4G24810.2 | Symbols: | Protein kinase superfamily protein | ... 1280 0.0 > AT5G50330.1 | Symbols: | Protein kinase superfamily protein | chr5:20485223-20488684 REVERSE LENGTH=1744 Length=1744 Score = 2560 bits (1386), Expect = 0.0 Identities = 1537/1609 (96%), Gaps = 13/1609 (1%) Strand=Plus/Plus Query 1 CGATCTCTATCAACTTCATCGTTTCTTCCGTTAAAGCTTTCAAATTTGATACGTTCGAAA 60 ||||||| ||||||||||||| |||||||| |||||||||| |||||||| || ||| Sbjct 18 CGATCTCGATCAACTTCATCGCTTCTTCCG--AAAGCTTTCACATTTGATA---TCAAAA 72 Query 61 TCGAGATACACAAATTGAAAACAATCTG-TTCTCCaaaagaaaaagaaaaaaaTGCATGG 119 |||||| ||| ||||||||||||||||| ||| || || |||||||| ||||||||||| Sbjct 73 TCGAGAAACAAAAATTGAAAACAATCTGTTTCACC--AA-AAAAAGAACAAAATGCATGG 129 Query 120 GTTCGATTTCAAAGAGATTCAGGAGAAGATCTCCGAGAGCTTTCGTCCATGGCAACGCTC 179 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct 130 GTTCGATTTCAAAGAGATCCAGGAGAAGATCTCCGATAGCTTTCGTCCATGGCAACGCTC 189 Query 180 TTTTCATTTCTGGGTTCGAGCTACTAATATCTACACAGGCTACAAGGTGTTTCAACTTCG 239 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 190 TTTTCAATTCTGGGTTCGAGCTACTAATATCTACACAGGCTACAAGGTGTTTCAACTTCG 249 Query 240 AGTGAGTTTAGTGAAAGATGCAAAGAAGCAAGAGGAAATGTGGGAAAGACAACATGAGCA 299 ||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct 250 AGTAAGTTTAGTAAAAGATGCAAAGAAGCAAGAGGAAATGTGGGAAAGACAACATGAACA 309 Query 300 AGCTGCTGATAAAATCTACTTCATGTGCTCTGACCTTGGGGGTTTCTTCCTTAAGATTGC 359 |||||||||||| || ||||||||||||||||| ||||| |||||||||||||||||||| Sbjct 310 AGCTGCTGATAAGATTTACTTCATGTGCTCTGATCTTGGTGGTTTCTTCCTTAAGATTGC 369 Query 360 TCAACTTTTAGCAAAACCTGACATGGCACCAGCTGCTTGGGTGAAAAAGCTTGTAACTTT 419 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct 370 TCAACTTTTAGCAAAACCTGACATGGCACCAGCTGCGTGGGTGAAAAAGCTTGTCACTTT 429 Query 420 GTGTGATCAAGCTCCTGCGACGCCGTTTGATGCAATTCAACTTGTTCTAGAGAAGGAGTT 479 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 430 GTGTGATCAAGCTCCTGCGACGCCGTTTGATGCGATTCAACTTGTTCTAGAGAAGGAGTT 489 Query 480 AGGTAAAAGCATTGGTGAAATCTTTGAAACATTTGATGAAAAGCCGCTTGGTTCTGCTTC 539 |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct 490 AGGTAAAAGCATTGGTGAAATCTTTGAAACGTTTGATGAAAAGCCTCTTGGTTCTGCTTC 549 Query 540 TATTGCTCAGGTTCACAGAGCAAGAGTAAAGGGTAACAAGATGAATGTTGTTGTAAAGGT 599 ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| Sbjct 550 TATTGCTCAGGTTCATAGAGCAATAGTAAAGGGTAACAAGATGAATGTTGTTGTAAAGGT 609 Query 600 TCAACACCCTGGCATCGAAAGGTTGATGATGACAGACATTAGAAACTTGCAACTATTCGC 659 |||||| |||||||| ||||| ||||||||||||||||| |||||||||||||||||||| Sbjct 610 TCAACATCCTGGCATTGAAAGATTGATGATGACAGACATAAGAAACTTGCAACTATTCGC 669 Query 660 CTTATACATGCAGAGAACAGATATCAAATTTGACCTGCATTCCATAACCAAGGAAATGGA 719 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 670 CTTATACATGCAGAGAACAGATATCAAATTTGACCTGCATTCCATAACAAAGGAAATGGA 729 Query 720 GAAACAGATTGGTTATGAATTTGACTTCAAAAGGGAGGCCAGTGCAATGGAAAGAATTCG 779 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 730 GAAACAGATTGGTTATGAATTTGACTTCAAAAGGGAGGCCAATGCAATGGAAAGAATTCG 789 Query 780 ATGTTTTCTTTATGAGAACAACAAAAAGTCTCCTGTTTTGGTACCAAGAGTTCTGCGAGA 839 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 790 ATGTTTTCTTTATGAGAACAACAAAAAGTCTCCTGTTTTGGTACCAAGAGTTCTGCGAGA 849 Query 840 TATGGTGACTAAGAGGGTTTTGGTGATGGAATACATTAATGGAATTCCAATTCTGAGCAT 899 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 850 TATGGTGACTAAGAGGGTTTTGGTGATGGAATACATTAATGGAATTCCAATCCTGAGCAT 909 Query 900 TGGTGATGAGATGGCTAAAAGAGGGATAAATCCTCATGGTAAGATTGCAGAGGCAGCAAA 959 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 910 TGGTGATGAGATGGCTAAAAGAGGGATAAATCCTCATGGTAAGATTGCAGAGGCAGCAAA 969 Query 960 GCACAATATACTTAGCAGTTTATCCCGTGCGTATGGCCAAATGATACTGAAAAGTGGTTT 1019 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 970 GCACAATATACTTAACAGTTTATCCCGTGCGTATGGCCAAATGATACTGAAAAGTGGTTT 1029 Query 1020 CTTTCATGCGGATCCACATCCTGGAAATATCTTGATTTGCAAAGGTCAAGAGGTTGCACT 1079 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1030 CTTTCATGCGGATCCACATCCTGGAAATATCTTGATTTGCAAAGGTCAAGAGGTTGCATT 1089 Query 1080 GCTGGACTATGGTCAAGTGAAGGAACTACCCGACAAGTTGAGACTTGGTTATGCGAATTT 1139 ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| Sbjct 1090 GCTGGACTATGGTCAAGTGAAGGAACTACCCAACAAGTTGAGACTTGGTTATGCAAATTT 1149 Query 1140 GGTCATTGCCATGGCTGATGACAATGCTTCAGGAGTATCACAGAGCTTTTGGGAAATGGG 1199 ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct 1150 GGTCATTGCCATGGCTGATAACAATGCTTCACGAGTATCACAGAGCTTTTGGGAAATGGG 1209 Query 1200 TTTGCGTACAGTGGCCAAGTGTGTGAACGAGCAGCAAGAACTTCTGCGGTTAGCACAAAC 1259 ||| | ||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct 1210 TTTACATACAGTGGCCAAGTGTGAGAATGAGCAGCAAGAACTTCTGCGGTTAGCACAAAC 1269 Query 1260 ACTTTTCGATACAAAGATGCC-AGCTGGTCAGACAGTTTTGCAACCATTCTCAGATGACT 1318 |||||| |||||||||||||| | |||||||||||||||| ||||| ||||||||||||| Sbjct 1270 ACTTTTTGATACAAAGATGCCTA-CTGGTCAGACAGTTTTACAACCTTTCTCAGATGACT 1328 Query 1319 CTTCGATTAAAAAGATAGCCGTTGAGACATTTCCAGAGGAACTGTTCTCTGTACTTCGTA 1378 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1329 CTTCGATTAAAAAGATAGCCGTTGAGACATTTCCAGAGGAACTGTTCTCTGTACTTCGCA 1388 Query 1379 CTGTGGTTCTGTTAAGAGGACTCAGTGTTGGGATGAGAGTTAATTACTCATGTGCACAAC 1438 ||||||||||||||||||||||||||||||||||| |||||||||| || |||||| ||| Sbjct 1389 CTGTGGTTCTGTTAAGAGGACTCAGTGTTGGGATGGGAGTTAATTATTCGTGTGCAGAAC 1448 Query 1439 AGTGGAGATCAATGGCCGAAGAGGCTTTACTTGCATCTGGAAGAATAACAAGAGATGGCA 1498 | |||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct 1449 AATGGAGAGCAATGGCCGAAGAGGCTTTACTTGCATCTGGAAGAGTGACAAGAGATGGCA 1508 Query 1499 AAGGAAGATCTCGTAGACAGGCTTCTCT-CGGAAGGCTACGCCCAGGAAGTTAGGAAAAG 1557 ||| |||||||||||||| ||||||||| || |||||||||| |||||||||||||||| Sbjct 1509 AAGAAAGATCTCGTAGACGGGCTTCTCTACG-AAGGCTACGCACAGGAAGTTAGGAAAAA 1567 Query 1558 GATAGGAGTATTTATCATCACTTAGACTCTCCCATGAGCAGGATCTGAG 1606 ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1568 GATAGGAGTATTTCTCATCACTTAGACTCTCCCATGAGCAGGATCTGAG 1616 Score = 82.4 bits (44), Expect = 1e-14 Identities = 46/47 (98%), Gaps = 0/47 (0%) Strand=Plus/Plus Query 1606 GTGAGAATTTGAATGATAGGAGAAGTTGGATAAGACTTGAATGTAAT 1652 ||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1644 GTGAGAATTTGAATGATAGGAGAAGTTGGATAACACTTGAATGTAAT 1690 > AT4G24810.2 | Symbols: | Protein kinase superfamily protein | chr4:12786627-12789713 REVERSE LENGTH=1725 Length=1725 Score = 1280 bits (693), Expect = 0.0 Identities = 1165/1392 (84%), Gaps = 36/1392 (3%) Strand=Plus/Plus Query 109 aaaaTGCATGGGTTCGATTTCAAAGAGATTCAGGAGAAGATCTCCGA-GAGCTTTCGTCC 167 |||||||||| | |||||||||||||||||||||||||| |||| || | | || || || Sbjct 113 AAAATGCATGCGATCGATTTCAAAGAGATTCAGGAGAAGCTCTCTGATG-GATTCCGGCC 171 Query 168 ATGGCAACGCTCTTTTCATTTCTGGGTTCGAGCTACTAATATCTACACAGGCTACAAGGT 227 |||||||| || ||||| ||||||| ||| || ||| |||||||||| || |||||||| Sbjct 172 TTGGCAACGATCGTTTCAGTTCTGGGCTCGTGCCACTGATATCTACACCGGATACAAGGT 231 Query 228 GTTTCAACTTCG-AGTGAGTTTAGTGAAAGATGCAAAGAAGCAAGAGGAAATGTGGGAAA 286 ||||||||||| | ||| || || || |||| || ||||| ||||| |||||||| | Sbjct 232 ATTTCAACTTCGTA-TGAACTTCGTCAAGGATGTTAATAAGCACGAGGAGATGTGGGAGA 290 Query 287 GACAACATGAGCAAGCTGCTGATAAAATCTACTTC-ATGTGCTCTGACCTTGGGGGTTTC 345 |||||||||| | |||||| ||||| | || ||| ||||||||||||||||| |||||| Sbjct 291 GACAACATGAACTTGCTGCTCATAAAGTTTA-TTCTATGTGCTCTGACCTTGGTGGTTTC 349 Query 346 TTCCTTAAGATTGCTCAACTTTTAGCAAAACCTGACATGGCACCAGCTGCTTGGGTGA-A 404 |||||||||||||| ||| || ||| ||||||||| |||| |||||||||||||||| | Sbjct 350 TTCCTTAAGATTGCACAAATTCTAGGGAAACCTGACTTGGCTCCAGCTGCTTGGGTGAGA 409 Query 405 AAAGCTTGTAACTTTGTGTGATCAAGCTCCTGCGACGCCGTTTGATGCAATTCAACTTGT 464 ||| || || ||||||||||||||||||||||| || || |||||||| ||| | |||| Sbjct 410 AAA-CTCGTCACTTTGTGTGATCAAGCTCCTGCCACACCATTTGATGCCGTTCGAGTTGT 468 Query 465 TCTAGAGAAGGAGTTAGGTAAAAGCATTGGTGAAATCTTTGAAACATTTGATGAAAAGCC 524 || ||||| ||||||||||||||||| | || | ||||||||||||||||| ||||| Sbjct 469 CCTGGAGAAAGAGTTAGGTAAAAGCATCGAACAAGTGTTTGAAACATTTGATGAGAAGCC 528 Query 525 GCTTGGTTCTGCTTCTATTGCTCAGGTTCACAGAGCAAGAGTAAAGGGTAACAAGATGAA 584 ||||| |||||||||||||||||||| ||| ||||||||||||||||| |||||| | | Sbjct 529 TCTTGGCTCTGCTTCTATTGCTCAGGTACACCGAGCAAGAGTAAAGGGTGACAAGAGGGA 588 Query 585 TGTTGTTGTAAAGGTTCAACACCCTGGCATCGA-AAGGTTGATGATGACAGACATTAGAA 643 ||||||||||||||| ||||| |||||| | || || |||||||||| || || |||| Sbjct 589 TGTTGTTGTAAAGGTCCAACATCCTGGCGTTGAGAA-GTTGATGATGGTTGATATCAGAA 647 Query 644 ACTTGCAACTATTCGCCTTATACATGCAGAGAACAGATATCAAATTTGACCTGCAT-TCC 702 |||||||| |||| || ||||||||||||| ||| ||||||||||||||| || | ||| Sbjct 648 ACTTGCAAATATTTGCATTATACATGCAGAAAACTGATATCAAATTTGACTTG-TTCTCC 706 Query 703 ATAACCAAGGAAATGGAGAAACAGATTGGTTATGAATTTGACTTCAAAAGGGAGGCCAGT 762 || || |||||||| ||||| |||||||| |||||||| ||||| ||||||||||||| | Sbjct 707 ATGACAAAGGAAATAGAGAAGCAGATTGGGTATGAATTCGACTTTAAAAGGGAGGCCAAT 766 Query 763 GCAATGGA-AAGAATTCGATGTTTTCTTTATGAGAACAACAAAAAGTCTCCTGTTTTGGT 821 |||||||| ||| || ||| ||||||| ||||| ||||| | |||| ||||||| |||| Sbjct 767 GCAATGGAGAAG-ATCCGACGTTTTCTATATGATAACAATAGAAAGAGTCCTGTTCTGGT 825 Query 822 ACCAAGAGT-TCTGCGAGATATGGTGACTAAGAGGGTTTTGGTGATGGAATACATTAATG 880 || || || | | | | || ||||||| | || |||| |||| ||||||| ||| || | Sbjct 826 TCCCAGGGTGT-TTCCAAATTTGGTGACCAGGAAGGTTCTGGTTATGGAATTCATGAACG 884 Query 881 GAATTCCAATTC-TGAGCATTGGTGATGAGATGGCTAAAAGAGGGATAAATCCTCATGGT 939 |||| || | || ||||| |||||||||||||||| |||||||||||||||||||||||| Sbjct 885 GAATCCCGA-TCTTGAGCCTTGGTGATGAGATGGCAAAAAGAGGGATAAATCCTCATGGT 943 Query 940 AAGATTGCAGAGGCAGCAAAGCACAATATACTTA-GCAGTTTATCCCGTGCGTATGGCCA 998 || || |||||||||||||| |||||||| || |||||| |||| || |||||||| Sbjct 944 AAAATGGCAGAGGCAGCAAAATTCAATATAC-TACACAGTTTGTCCCAAGCATATGGCCA 1002 Query 999 AATGATACTGAAAAGTGGTTTCTTTCATGCGGATCCACATCCTGGAAATATCTTGATTTG 1058 |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| | Sbjct 1003 AATGATACTGAAGAGTGGTTTCTTTCATGCGGATCCACATCCTGGGAATATCTTGATTGG 1062 Query 1059 CAAAGGT-CAAGAGGTTGCACTGCTGGACTATGGTCAAGTGAAGGAACTACCC-GACAAG 1116 |||||| || |||||||||||||||||||||||||||||||| ||||| ||| ||| | Sbjct 1063 TAAAGGTTCA-GAGGTTGCACTGCTGGACTATGGTCAAGTGAAAGAACT-CCCTGACCAC 1120 Query 1117 TTGAGACTTGGTTATGCGAATTTGGTCATTGCCATGGCTGATGACAATGCTTCA--GGAG 1174 |||||||||||||||| |||||||| |||||||| |||||| ||||||| ||| || | Sbjct 1121 CTGAGACTTGGTTATGCAAATTTGGTAATTGCCATCGCTGATAACAATGCGTCATTGGCG 1180 Query 1175 TATCACAGAGCTTTTGGGAAATGGGTTT-GCGTACAGTGGCCAAGTGTGTGAACGAGCAG 1233 | | |||||||||| ||||| | ||| | || |||||| ||||||||| ||| ||||| Sbjct 1181 T-T-ACAGAGCTTTAGGGAACTTGGTATAGC-TACAGTAGCCAAGTGTAAGAATGAGCAA 1237 Query 1234 CAAGAACTTCTGCGGTTAGCACAAACACTTTTCGATACAAAGATGCCAGCTGGT-CAGAC 1292 ||||| ||||| | ||||||| ||||| | ||||| ||| ||||||| ||||| | ||| Sbjct 1238 CAAGAGCTTCTCCAGTTAGCAAAAACAATGTTCGACACAGAGATGCCTCCTGGTAC-GAC 1296 Query 1293 AGTTTTGCAACCATTCTCAGATGACTCTTCGATTAAAAAGATAGCCGTTGAGACATTTCC 1352 | | ||||||| |||||||| ||||||||||| |||||||| | |||||| ||||||| Sbjct 1297 AACTCTGCAACCTTTCTCAGAAGACTCTTCGATCAAAAAGATTTCGGTTGAGGCATTTCC 1356 Query 1353 AGAGGAACTGTTCTCTGTACTTCGTACTGTGGTTCTGTTAAGAGGACTCAGTGTTGGGAT 1412 ||||||||| |||||||| ||||| || || |||||||||||||||||||| || ||||| Sbjct 1357 AGAGGAACTCTTCTCTGTTCTTCGCACAGTAGTTCTGTTAAGAGGACTCAGCGTAGGGAT 1416 Query 1413 -GAG-AGTTAATTACTCATGTGCACAACAGTGGAGATCAATGGCCGAAGAGGCTTTACTT 1470 | | | |||||||||| || || ||||| ||||| | ||||| ||||||||||| | | Sbjct 1417 TG-GCA-TTAATTACTCCTGCGCTCAACACTGGAGGGCTATGGCAGAAGAGGCTTTGCAT 1474 Query 1471 GCATCTGGAAGA 1482 |||||||||||| Sbjct 1475 GCATCTGGAAGA 1486 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 81626086170 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5