BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg495116
Length=1678
Score E
Sequences producing significant alignments: (Bits) Value
AT5G50520.1 | Symbols: | Major facilitator superfamily protein... 2619 0.0
AT5G50630.1 | Symbols: | Major facilitator superfamily protein... 2619 0.0
> AT5G50520.1 | Symbols: | Major facilitator superfamily protein
| chr5:20569563-20571615 REVERSE LENGTH=1768
Length=1768
Score = 2619 bits (1418), Expect = 0.0
Identities = 1598/1685 (95%), Gaps = 11/1685 (1%)
Strand=Plus/Plus
Query 1 ATGACCTGGTGGCGTCACAAACTAGAGCTCCTAGTCAACGACCGATGGCTAGTCTTCGTC 60
||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 32 ATGACTTTGTGGCGTCACAAACTAGAGCTCCTAGTCAACGACCGATGGCTAGTTTTCGTC 91
Query 61 TGCGCCATGTGGATCCAATCCGTCGCCGGCGTCGGTTACCTATTCGGCGGCTCTATGTCT 120
|||||||||||| ||||||||||||||||||| || || |||||||||||||||||||||
Sbjct 92 TGCGCCATGTGGGTCCAATCCGTCGCCGGCGTTGGCTATCTATTCGGCGGCTCTATGTCT 151
Query 121 CCGGCAATCAAGACTTCCCTTGGCTACAATCAGAAACAAATCGCTCTTCTCGGTGTTGCT 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||
Sbjct 152 CCGGCAATCAAGACTTCCCTTGGCTACAATCAGAAACAGATCGCTCTTCTCGGCGTAGCT 211
Query 181 AAAAACCTCGGTGACGCTATCGGATTCGTCTCCGGTGCTTTATCTGAGGTCTCACCTTCC 240
||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 212 AAAAACCTCGGTGACGCCATCGGATTCGTCTCCGGTGCTTTATCTGAAGTCTCACCTTCC 271
Query 241 TGGGTTGTTCTACTCGTCGGTGCAACTCAGAACCTTGTT-GGCTACGGTGTTGTTTGGCT 299
||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 272 TGGGTGGTTCTACTCGTCGGTGCAACTCAGAACCTT-TTCGGCTACGGTGTTGTTTGGCT 330
Query 300 CGTCGTCACTGGTCAATTGCCTAATTTGCCTCTCTGGATGTTGTTTGTTGCTATATTCGT 359
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 331 CGTCGTCACTGGCCAATTGCCTAATTTGCCTCTCTGGATGTTGTTTGTTGCTATATTCGT 390
Query 360 GGGAACAAATGGTGAAACTTACTACAATACAGCATCGCTTGTGTCATGCATTCATAACTT 419
|||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct 391 GGGAACAAATGGGGAAACATACTACAATACAGCGTCGCTTGTGTCATGCATTCATAACTT 450
Query 420 CCCTGAAAGTCGTGGTCCTGTGGTGGGAATCTTGAAAGGGTTTTCTGGTTTGAGTGGAGC 479
||| ||||| || |||||||||||||||||| |||||||||||||||| |||||||||||
Sbjct 451 CCCAGAAAGCCGAGGTCCTGTGGTGGGAATCCTGAAAGGGTTTTCTGGCTTGAGTGGAGC 510
Query 480 AATCTTGACTCAGGTTTATTTGATGTTCAATCCTTCTCATGATTCTTCGGTTATTCTCAT 539
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 511 AATCTTGACTCAGGTTTATTTGATGTTCAACCCTTCTCATGATTCTTCGGTTATTCTCAT 570
Query 540 GGTTGCTCTTGGACCACCAGTAGTGGTTGTTGCTTTACTATTCGTTGTTAGACCAGTGGA 599
||||||||||||||||||||| |||||| ||||| ||||||| |||||||||| |||||
Sbjct 571 GGTTGCTCTTGGACCACCAGTCGTGGTTCTTGCTCTACTATTTATTGTTAGACCCGTGGA 630
Query 600 AAGAAGTTGCAGAACGAACTTTCGATCTGATGATTTACGATTCTTGGCTATTTACGGTTT 659
||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||
Sbjct 631 AAGAAGTTGCAGAACGAACTTGCGATCTGATGATTTAAGATTCCTGGCTATTTACGGTTT 690
Query 660 CTGTGTTGTCCTTGCAGTATATTTACTAGGATTGTTGGTACTTCAGAGTCTTTTTGATAT 719
||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 691 CTGTGTTGTCCTTGCGGTATATTTACTAGGATTGTTGGTACTTCAGAGTGTTTTTGATAT 750
Query 720 AACTCAAACAATTATCACAACCTCTGGAGCCATCCTTGTTGTTTTCATGGTTGTTCCAGT 779
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 751 GACTCAAACGATTATCACAACCTCTGGAGCCATCCTTGTCATTTTCATGGTTGTTCCAGT 810
Query 780 TCTTGTTCCGTTTTCATCGGTTTTCATCTCGGGTAATAATGTCACCTTAGTGAAGTCC-G 838
|||||| || ||||||||||||||||||||||||||||||||||||| ||||||| || |
Sbjct 811 TCTTGTCCCTTTTTCATCGGTTTTCATCTCGGGTAATAATGTCACCTCAGTGAAG-CCTG 869
Query 839 AAGAAGGAACTTCTC-ATGTGGATCAGCATGAGGTTAAAACTTTAATTGAGAGAAGTGAC 897
||||||||||||| | |||||||||||||||||| || ||||||||||||||||||||||
Sbjct 870 AAGAAGGAACTTC-CAATGTGGATCAGCATGAGGCTAGAACTTTAATTGAGAGAAGTGAC 928
Query 898 ATATTGCCGGAAAA-AAGAAGAGCGCCGTGTATAGGAGAAGATTTCACCTTGTTACAAGC 956
| | ||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct 929 AGACCGCCGGAAAAGAA-AAGAGCGCCGTGTATAGGAGAAGATTTCACCTTGTTACAAGC 987
Query 957 TTTGGGACAAGCCGACTTTTGGCTTATATTTATATCTCTGGTTCTAGGTGTAGGTTCGGG 1016
|||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct 988 TTTGGGACAAGCTGACTTCTGGCTTATATTTATGTCTCTGGTTCTAGGTGTAGGTTCGGG 1047
Query 1017 AATAACGGTTATAGATAATCTTGGTCAGATTTGTTATTCCCTCGGGTACAACAACACCAA 1076
||| ||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1048 AATCACGATTATAGACAATCTTGGTCAGATTTGTTATTCCCTCGGGTACAGCAACACCAA 1107
Query 1077 AATATTTGTCTCACTGATCAGCATCTCCAATTTTCTCGGCCGTGTTGCTGGTGGCTACTT 1136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1108 AATATTTGTCTCACTGATCAGCATCTCCAATTTTCTCGGCCGTGTTGCTGGTGGCTACTT 1167
Query 1137 CTCAGAGCTAATCATAAGAAAACTCTCACTTCCAAGAACATTGGCAATGTCTGTGGTTCA 1196
||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct 1168 CTCTGAGCTAATCATAAGGAAACTCTCACTTCCAAGAACGTTGGCAATGTCTGTGGTTCA 1227
Query 1197 GGCGATAATGTCTTTAGGGCTCATCTACTATGCCATAGACTGGCCAGGGAAGATCTACGT 1256
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1228 GGCGATAATGTCTTTGGGGCTCATCTACTATGCCATAGATTGGCCAGGGAAGATCTACGT 1287
Query 1257 AGTGACCATTGTAATAGGAATGGGTTATGGCGCTCACTGGGCGATCGCTCCTGCTTCAGT 1316
|||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct 1288 AGTGACCATTGTGATAGGAATGGGTTATGGCGCTCATTGGGCGATTGCTCCTGCTTCAGT 1347
Query 1317 GTCTGACATTTTTGGCCTGAAGAGCTTTGGTTCTCTCTACAATTTCCAGATCACAGCTTT 1376
|||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||
Sbjct 1348 CTCTGACATTTTTGGCCTGAAGAGCTTCGGTTCTCTTTACAATTTCCAGATTACAGCTTT 1407
Query 1377 GCCTATTGGGTCATTTGTGTTCTCAGGTGTGATTGCTAGTAACATCTATGACTACTACGC 1436
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1408 GCCTATTGGGTCATTTGTGTTCTCAGGTGTGATCGCTAGTAACATCTATGACTACTACGC 1467
Query 1437 CAGAAAGCAAGCCGGACCCTCCACAGAAACTGAGTCGCTTGTCTGCACGGGCTCGGTGTG 1496
||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||
Sbjct 1468 CAGAAAGCAAGCCGGACCCACCACAGAGACTGAGTCGCTCGTCTGCACGGGCTCGGTGTG 1527
Query 1497 TTATTCAGTCACGTGCGGTCTTATGTCCATGTTGTGTCTACTGGCTATGGTTTTTAGTTT 1556
|||||||||||||||| |||| |||||||||||||||||| ||||||||||||| |||||
Sbjct 1528 TTATTCAGTCACGTGCAGTCTCATGTCCATGTTGTGTCTAATGGCTATGGTTTTGAGTTT 1587
Query 1557 GAGTGTGGTTTATAGGACGAGGAAGTTTTACTTGAGGCTT-A--ACCGAGTCTCAAAGAC 1613
|||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct 1588 GAGTGTGGTTTATAGGACGAGGAAGTTTTACTTGAGGCTTCATCACCGAGTCTCAAAGAC 1647
Query 1614 TTGAAGATAGTGTAACTGTGTAAGCAATTTTCATTTTGTCTTTGGAAGATACATGTAAGC 1673
||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||
Sbjct 1648 TTGAAGATAGTGTAATTGTGTAAGCAATTTTCATTTGGTCTTTGGAAGATATATGTAAGC 1707
Query 1674 AATTT 1678
|||||
Sbjct 1708 AATTT 1712
> AT5G50630.1 | Symbols: | Major facilitator superfamily protein
| chr5:20602921-20604956 REVERSE LENGTH=1751
Length=1751
Score = 2619 bits (1418), Expect = 0.0
Identities = 1598/1685 (95%), Gaps = 11/1685 (1%)
Strand=Plus/Plus
Query 1 ATGACCTGGTGGCGTCACAAACTAGAGCTCCTAGTCAACGACCGATGGCTAGTCTTCGTC 60
||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 32 ATGACTTTGTGGCGTCACAAACTAGAGCTCCTAGTCAACGACCGATGGCTAGTTTTCGTC 91
Query 61 TGCGCCATGTGGATCCAATCCGTCGCCGGCGTCGGTTACCTATTCGGCGGCTCTATGTCT 120
|||||||||||| ||||||||||||||||||| || || |||||||||||||||||||||
Sbjct 92 TGCGCCATGTGGGTCCAATCCGTCGCCGGCGTTGGCTATCTATTCGGCGGCTCTATGTCT 151
Query 121 CCGGCAATCAAGACTTCCCTTGGCTACAATCAGAAACAAATCGCTCTTCTCGGTGTTGCT 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||
Sbjct 152 CCGGCAATCAAGACTTCCCTTGGCTACAATCAGAAACAGATCGCTCTTCTCGGCGTAGCT 211
Query 181 AAAAACCTCGGTGACGCTATCGGATTCGTCTCCGGTGCTTTATCTGAGGTCTCACCTTCC 240
||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 212 AAAAACCTCGGTGACGCCATCGGATTCGTCTCCGGTGCTTTATCTGAAGTCTCACCTTCC 271
Query 241 TGGGTTGTTCTACTCGTCGGTGCAACTCAGAACCTTGTT-GGCTACGGTGTTGTTTGGCT 299
||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 272 TGGGTGGTTCTACTCGTCGGTGCAACTCAGAACCTT-TTCGGCTACGGTGTTGTTTGGCT 330
Query 300 CGTCGTCACTGGTCAATTGCCTAATTTGCCTCTCTGGATGTTGTTTGTTGCTATATTCGT 359
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 331 CGTCGTCACTGGCCAATTGCCTAATTTGCCTCTCTGGATGTTGTTTGTTGCTATATTCGT 390
Query 360 GGGAACAAATGGTGAAACTTACTACAATACAGCATCGCTTGTGTCATGCATTCATAACTT 419
|||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct 391 GGGAACAAATGGGGAAACATACTACAATACAGCGTCGCTTGTGTCATGCATTCATAACTT 450
Query 420 CCCTGAAAGTCGTGGTCCTGTGGTGGGAATCTTGAAAGGGTTTTCTGGTTTGAGTGGAGC 479
||| ||||| || |||||||||||||||||| |||||||||||||||| |||||||||||
Sbjct 451 CCCAGAAAGCCGAGGTCCTGTGGTGGGAATCCTGAAAGGGTTTTCTGGCTTGAGTGGAGC 510
Query 480 AATCTTGACTCAGGTTTATTTGATGTTCAATCCTTCTCATGATTCTTCGGTTATTCTCAT 539
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 511 AATCTTGACTCAGGTTTATTTGATGTTCAACCCTTCTCATGATTCTTCGGTTATTCTCAT 570
Query 540 GGTTGCTCTTGGACCACCAGTAGTGGTTGTTGCTTTACTATTCGTTGTTAGACCAGTGGA 599
||||||||||||||||||||| |||||| ||||| ||||||| |||||||||| |||||
Sbjct 571 GGTTGCTCTTGGACCACCAGTCGTGGTTCTTGCTCTACTATTTATTGTTAGACCCGTGGA 630
Query 600 AAGAAGTTGCAGAACGAACTTTCGATCTGATGATTTACGATTCTTGGCTATTTACGGTTT 659
||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||
Sbjct 631 AAGAAGTTGCAGAACGAACTTGCGATCTGATGATTTAAGATTCCTGGCTATTTACGGTTT 690
Query 660 CTGTGTTGTCCTTGCAGTATATTTACTAGGATTGTTGGTACTTCAGAGTCTTTTTGATAT 719
||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 691 CTGTGTTGTCCTTGCGGTATATTTACTAGGATTGTTGGTACTTCAGAGTGTTTTTGATAT 750
Query 720 AACTCAAACAATTATCACAACCTCTGGAGCCATCCTTGTTGTTTTCATGGTTGTTCCAGT 779
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 751 GACTCAAACGATTATCACAACCTCTGGAGCCATCCTTGTCATTTTCATGGTTGTTCCAGT 810
Query 780 TCTTGTTCCGTTTTCATCGGTTTTCATCTCGGGTAATAATGTCACCTTAGTGAAGTCC-G 838
|||||| || ||||||||||||||||||||||||||||||||||||| ||||||| || |
Sbjct 811 TCTTGTCCCTTTTTCATCGGTTTTCATCTCGGGTAATAATGTCACCTCAGTGAAG-CCTG 869
Query 839 AAGAAGGAACTTCTC-ATGTGGATCAGCATGAGGTTAAAACTTTAATTGAGAGAAGTGAC 897
||||||||||||| | |||||||||||||||||| || ||||||||||||||||||||||
Sbjct 870 AAGAAGGAACTTC-CAATGTGGATCAGCATGAGGCTAGAACTTTAATTGAGAGAAGTGAC 928
Query 898 ATATTGCCGGAAAA-AAGAAGAGCGCCGTGTATAGGAGAAGATTTCACCTTGTTACAAGC 956
| | ||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct 929 AGACCGCCGGAAAAGAA-AAGAGCGCCGTGTATAGGAGAAGATTTCACCTTGTTACAAGC 987
Query 957 TTTGGGACAAGCCGACTTTTGGCTTATATTTATATCTCTGGTTCTAGGTGTAGGTTCGGG 1016
|||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct 988 TTTGGGACAAGCTGACTTCTGGCTTATATTTATGTCTCTGGTTCTAGGTGTAGGTTCGGG 1047
Query 1017 AATAACGGTTATAGATAATCTTGGTCAGATTTGTTATTCCCTCGGGTACAACAACACCAA 1076
||| ||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1048 AATCACGATTATAGACAATCTTGGTCAGATTTGTTATTCCCTCGGGTACAGCAACACCAA 1107
Query 1077 AATATTTGTCTCACTGATCAGCATCTCCAATTTTCTCGGCCGTGTTGCTGGTGGCTACTT 1136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1108 AATATTTGTCTCACTGATCAGCATCTCCAATTTTCTCGGCCGTGTTGCTGGTGGCTACTT 1167
Query 1137 CTCAGAGCTAATCATAAGAAAACTCTCACTTCCAAGAACATTGGCAATGTCTGTGGTTCA 1196
||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct 1168 CTCTGAGCTAATCATAAGGAAACTCTCACTTCCAAGAACGTTGGCAATGTCTGTGGTTCA 1227
Query 1197 GGCGATAATGTCTTTAGGGCTCATCTACTATGCCATAGACTGGCCAGGGAAGATCTACGT 1256
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1228 GGCGATAATGTCTTTGGGGCTCATCTACTATGCCATAGATTGGCCAGGGAAGATCTACGT 1287
Query 1257 AGTGACCATTGTAATAGGAATGGGTTATGGCGCTCACTGGGCGATCGCTCCTGCTTCAGT 1316
|||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct 1288 AGTGACCATTGTGATAGGAATGGGTTATGGCGCTCATTGGGCGATTGCTCCTGCTTCAGT 1347
Query 1317 GTCTGACATTTTTGGCCTGAAGAGCTTTGGTTCTCTCTACAATTTCCAGATCACAGCTTT 1376
|||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||
Sbjct 1348 CTCTGACATTTTTGGCCTGAAGAGCTTCGGTTCTCTTTACAATTTCCAGATTACAGCTTT 1407
Query 1377 GCCTATTGGGTCATTTGTGTTCTCAGGTGTGATTGCTAGTAACATCTATGACTACTACGC 1436
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1408 GCCTATTGGGTCATTTGTGTTCTCAGGTGTGATCGCTAGTAACATCTATGACTACTACGC 1467
Query 1437 CAGAAAGCAAGCCGGACCCTCCACAGAAACTGAGTCGCTTGTCTGCACGGGCTCGGTGTG 1496
||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||
Sbjct 1468 CAGAAAGCAAGCCGGACCCACCACAGAGACTGAGTCGCTCGTCTGCACGGGCTCGGTGTG 1527
Query 1497 TTATTCAGTCACGTGCGGTCTTATGTCCATGTTGTGTCTACTGGCTATGGTTTTTAGTTT 1556
|||||||||||||||| |||| |||||||||||||||||| ||||||||||||| |||||
Sbjct 1528 TTATTCAGTCACGTGCAGTCTCATGTCCATGTTGTGTCTAATGGCTATGGTTTTGAGTTT 1587
Query 1557 GAGTGTGGTTTATAGGACGAGGAAGTTTTACTTGAGGCTT-A--ACCGAGTCTCAAAGAC 1613
|||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct 1588 GAGTGTGGTTTATAGGACGAGGAAGTTTTACTTGAGGCTTCATCACCGAGTCTCAAAGAC 1647
Query 1614 TTGAAGATAGTGTAACTGTGTAAGCAATTTTCATTTTGTCTTTGGAAGATACATGTAAGC 1673
||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||
Sbjct 1648 TTGAAGATAGTGTAATTGTGTAAGCAATTTTCATTTGGTCTTTGGAAGATATATGTAAGC 1707
Query 1674 AATTT 1678
|||||
Sbjct 1708 AATTT 1712
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 82931300340
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5