BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg495124
Length=1173
Score E
Sequences producing significant alignments: (Bits) Value
AT5G50580.2 | Symbols: SAE1B, AT-SAE1-2 | SUMO-activating enzym... 1796 0.0
AT5G50680.1 | Symbols: ATSAE1B, SAE1B | SUMO activating enzyme ... 1796 0.0
AT4G24940.1 | Symbols: SAE1A, AT-SAE1-1, ATSAE1A | SUMO-activat... 857 0.0
> AT5G50580.2 | Symbols: SAE1B, AT-SAE1-2 | SUMO-activating enzyme
1B | chr5:20585349-20587620 FORWARD LENGTH=1333
Length=1333
Score = 1796 bits (972), Expect = 0.0
Identities = 1088/1144 (95%), Gaps = 8/1144 (1%)
Strand=Plus/Plus
Query 34 CTAGGGTTTCACTAAGAGAATGGACGGAGAAGAGCTCACCGAGCAAGAAACTGCTCTATA 93
|||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||| ||
Sbjct 133 CTAGGGTTTCACTACGAGAATGGACGGAGATGAGCTCACCGAGCAGGAAACTGCTCTTTA 192
Query 94 CGACCGCCAAATTAGGGTTTGGGGCGCTGGTGCTCAAAGAAGATTGAGTAAATCTCATGT 153
||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct 193 TGACCGTCAAATTAGGGTATGGGGAGCTGGTGCTCAAAGAAGATTGAGTAAATCTCATGT 252
Query 154 TTTGGTATCTGGAATTAAGGGGACTGTTGCTGAGTTTTGCAAGAACATTGTGTTGGCTGG 213
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||
Sbjct 253 TTTGGTATCTGGAATTAAGGGCACTGTTGCTGAGTTTTGTAAGAACATTGTGTTGGCAGG 312
Query 214 AGTTGGTAGTGTGACTCTATTGGATGATCGGTTGGTTACAACGGAAG-CATTCAACGCAA 272
||| |||||||||||||| ||||||||||| |||||||||||||||| | ||||||||||
Sbjct 313 AGTAGGTAGTGTGACTCTGTTGGATGATCGATTGGTTACAACGGAAGTC-TTCAACGCAA 371
Query 273 ACTTCTTGATTCTTCCTGATGAAAATGCTTATGTAGGCAAAACCGTAGCTGAGATTTGTT 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 372 ACTTCTTGATTCTTCCTGATGAAAATGCTTATGTAGGCAAAACCGTAGCTGAGATTTGTT 431
Query 333 GTGATTCACTTAAGGAATTTAACCCTATGGTCCATGTTTCAATAGA-AACAGGTGATTTG 391
|||||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||
Sbjct 432 GTGATTCACTTAAGGATTTTAACCCTATGGTTCATGTTTCAATAGAGAA-AGGTGATTTG 490
Query 392 TCAACATTTGGCGTTGATTTTTTCGAGAAGTTTGATGTTGTGGTTATCGGCTACAGTTCT 451
|||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 491 TCAACACTTGGTGTTGATTTTTTCGAGAAGTTTGATGTTGTGGTTATCGGCTACAGTTCT 550
Query 452 CGTGCTACTAAGAAAGCAGTTAATGAAAAATGTAGGAACCTAGCAAAACG-TGTGGCGTT 510
||||||||||||||||||||||||||||| |||||||||||||||||| | ||| |||||
Sbjct 551 CGTGCTACTAAGAAAGCAGTTAATGAAAAGTGTAGGAACCTAGCAAAA-GATGTAGCGTT 609
Query 511 CTATACAGTTGATTGTAGAGGCTCATGTGGCGAAATATTTGTCGACCTGCAGAATTATAA 570
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 610 CTATACAGTTGATTGTAGAGGCTCATGTGGCGAAATATTTGTCGACCTTCAGAATTATAA 669
Query 571 GTACACAAAGAAAAAGCTTGATGAAACAGTGGAATGTGAACTAACATTTCCAAGTTTTGA 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 670 GTACACAAAGAAAAAGCTTGATGAAACAGTGGAATGTGAACTAACATTTCCAAGTTTTGA 729
Query 631 GGAGGCAGTTTCAGCACCATGGAAACCGATTCCAAGGAGAACAGCAAAGCTCTACTTTGC 690
|||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 730 GGAGGCAGTTTCAGTACCGTGGAAACCGATGCCAAGGAGAACAGCAAAGCTCTACTTTGC 789
Query 691 AATCAGAGTGATAGAACTATTTGAGGAAACTGAAGGGCGTAAACCTGGGGAATGTTCGCT 750
||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 790 AATGAGAGTGATAGAACTATTTGAGGAAACTGAAGGACGTAAACCTGGGGAATGTTCGCT 849
Query 751 GTCTGATCTCCCAAGAGTTTTGAAACTCAAAAAGGAACTCTGTGAGGGAAATTCGGTTAG 810
||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||
Sbjct 850 GTCTGATCTCCCAAGAGTTTTGAAACTCAAAAAGGAACTATGTGAAGGAAATTCGGTCAG 909
Query 811 CGAGAAACATATTCCAGATAGCCTCCTGGAGAGACTAGTATCTGGTAACACAGAATTCCC 870
|||||| ||||||||||||| |||| |||||||||| |||||| |||||||||||||||
Sbjct 910 CGAGAATCATATTCCAGATATCCTCTTGGAGAGACTCGTATCTAATAACACAGAATTCCC 969
Query 871 ACCAGCTTGTGCCATCATTGGAGGGATTCTAGGACAGGAGGTGATAAAAGTTATATCGGG 930
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 970 ACCGGCTTGTGCCATCATTGGAGGGATTCTAGGACAGGAGGTGATAAAAGTTATATCAGG 1029
Query 931 CAAAGGAGAGCCGTTGAAGAACTTCTTCTACTTTGATGCAGAGGATGGGAAAGGTGTAAT 990
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1030 CAAAGGAGAGCCGTTGAAGAACTTCTTCTACTTTGATGCAGAGGATGGGAAAGGTGTAAT 1089
Query 991 CGAAGACCTATCTAACAAGCTTTAACTTCCAAACCTTAAAGGTGCTGTGAAATGCTGCTC 1050
||| |||||||| |||||||||||||||||||| | ||||||||||||||| |||||||
Sbjct 1090 CGAGGACCTATCCCACAAGCTTTAACTTCCAAACATGAAAGGTGCTGTGAAACGCTGCTC 1149
Query 1051 TTAGTAATTAGTTCCTTGTTGAATATTGTATTGGAAATTAGACTTTAGAGTGCTTAGAAC 1110
||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||
Sbjct 1150 TTAGTAATTAGTTCCTTGTTGAAGATTGTATTGGAAATTAGACTTTAGAGTACTTAGAAC 1209
Query 1111 TTGGCTCCTTGTCTTTTGTATCTACTAACTTGGTTCAG-TCCAAAAGACAATCTGAAATC 1169
|||||||||||||||||||||||||||||||||||| | ||| |||||||||||| || |
Sbjct 1210 TTGGCTCCTTGTCTTTTGTATCTACTAACTTGGTTC-GCTCCTAAAGACAATCTGTAACC 1268
Query 1170 CACT 1173
||||
Sbjct 1269 CACT 1272
> AT5G50680.1 | Symbols: ATSAE1B, SAE1B | SUMO activating enzyme
1B | chr5:20618743-20620937 FORWARD LENGTH=1256
Length=1256
Score = 1796 bits (972), Expect = 0.0
Identities = 1088/1144 (95%), Gaps = 8/1144 (1%)
Strand=Plus/Plus
Query 34 CTAGGGTTTCACTAAGAGAATGGACGGAGAAGAGCTCACCGAGCAAGAAACTGCTCTATA 93
|||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||| ||
Sbjct 81 CTAGGGTTTCACTACGAGAATGGACGGAGATGAGCTCACCGAGCAGGAAACTGCTCTTTA 140
Query 94 CGACCGCCAAATTAGGGTTTGGGGCGCTGGTGCTCAAAGAAGATTGAGTAAATCTCATGT 153
||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct 141 TGACCGTCAAATTAGGGTATGGGGAGCTGGTGCTCAAAGAAGATTGAGTAAATCTCATGT 200
Query 154 TTTGGTATCTGGAATTAAGGGGACTGTTGCTGAGTTTTGCAAGAACATTGTGTTGGCTGG 213
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||
Sbjct 201 TTTGGTATCTGGAATTAAGGGCACTGTTGCTGAGTTTTGTAAGAACATTGTGTTGGCAGG 260
Query 214 AGTTGGTAGTGTGACTCTATTGGATGATCGGTTGGTTACAACGGAAG-CATTCAACGCAA 272
||| |||||||||||||| ||||||||||| |||||||||||||||| | ||||||||||
Sbjct 261 AGTAGGTAGTGTGACTCTGTTGGATGATCGATTGGTTACAACGGAAGTC-TTCAACGCAA 319
Query 273 ACTTCTTGATTCTTCCTGATGAAAATGCTTATGTAGGCAAAACCGTAGCTGAGATTTGTT 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 320 ACTTCTTGATTCTTCCTGATGAAAATGCTTATGTAGGCAAAACCGTAGCTGAGATTTGTT 379
Query 333 GTGATTCACTTAAGGAATTTAACCCTATGGTCCATGTTTCAATAGA-AACAGGTGATTTG 391
|||||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||
Sbjct 380 GTGATTCACTTAAGGATTTTAACCCTATGGTTCATGTTTCAATAGAGAA-AGGTGATTTG 438
Query 392 TCAACATTTGGCGTTGATTTTTTCGAGAAGTTTGATGTTGTGGTTATCGGCTACAGTTCT 451
|||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 439 TCAACACTTGGTGTTGATTTTTTCGAGAAGTTTGATGTTGTGGTTATCGGCTACAGTTCT 498
Query 452 CGTGCTACTAAGAAAGCAGTTAATGAAAAATGTAGGAACCTAGCAAAACG-TGTGGCGTT 510
||||||||||||||||||||||||||||| |||||||||||||||||| | ||| |||||
Sbjct 499 CGTGCTACTAAGAAAGCAGTTAATGAAAAGTGTAGGAACCTAGCAAAA-GATGTAGCGTT 557
Query 511 CTATACAGTTGATTGTAGAGGCTCATGTGGCGAAATATTTGTCGACCTGCAGAATTATAA 570
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 558 CTATACAGTTGATTGTAGAGGCTCATGTGGCGAAATATTTGTCGACCTTCAGAATTATAA 617
Query 571 GTACACAAAGAAAAAGCTTGATGAAACAGTGGAATGTGAACTAACATTTCCAAGTTTTGA 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 618 GTACACAAAGAAAAAGCTTGATGAAACAGTGGAATGTGAACTAACATTTCCAAGTTTTGA 677
Query 631 GGAGGCAGTTTCAGCACCATGGAAACCGATTCCAAGGAGAACAGCAAAGCTCTACTTTGC 690
|||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 678 GGAGGCAGTTTCAGTACCGTGGAAACCGATGCCAAGGAGAACAGCAAAGCTCTACTTTGC 737
Query 691 AATCAGAGTGATAGAACTATTTGAGGAAACTGAAGGGCGTAAACCTGGGGAATGTTCGCT 750
||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 738 AATGAGAGTGATAGAACTATTTGAGGAAACTGAAGGACGTAAACCTGGGGAATGTTCGCT 797
Query 751 GTCTGATCTCCCAAGAGTTTTGAAACTCAAAAAGGAACTCTGTGAGGGAAATTCGGTTAG 810
||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||
Sbjct 798 GTCTGATCTCCCAAGAGTTTTGAAACTCAAAAAGGAACTATGTGAAGGAAATTCGGTCAG 857
Query 811 CGAGAAACATATTCCAGATAGCCTCCTGGAGAGACTAGTATCTGGTAACACAGAATTCCC 870
|||||| ||||||||||||| |||| |||||||||| |||||| |||||||||||||||
Sbjct 858 CGAGAATCATATTCCAGATATCCTCTTGGAGAGACTCGTATCTAATAACACAGAATTCCC 917
Query 871 ACCAGCTTGTGCCATCATTGGAGGGATTCTAGGACAGGAGGTGATAAAAGTTATATCGGG 930
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 918 ACCGGCTTGTGCCATCATTGGAGGGATTCTAGGACAGGAGGTGATAAAAGTTATATCAGG 977
Query 931 CAAAGGAGAGCCGTTGAAGAACTTCTTCTACTTTGATGCAGAGGATGGGAAAGGTGTAAT 990
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 978 CAAAGGAGAGCCGTTGAAGAACTTCTTCTACTTTGATGCAGAGGATGGGAAAGGTGTAAT 1037
Query 991 CGAAGACCTATCTAACAAGCTTTAACTTCCAAACCTTAAAGGTGCTGTGAAATGCTGCTC 1050
||| |||||||| |||||||||||||||||||| | ||||||||||||||| |||||||
Sbjct 1038 CGAGGACCTATCCCACAAGCTTTAACTTCCAAACATGAAAGGTGCTGTGAAACGCTGCTC 1097
Query 1051 TTAGTAATTAGTTCCTTGTTGAATATTGTATTGGAAATTAGACTTTAGAGTGCTTAGAAC 1110
||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||
Sbjct 1098 TTAGTAATTAGTTCCTTGTTGAAGATTGTATTGGAAATTAGACTTTAGAGTACTTAGAAC 1157
Query 1111 TTGGCTCCTTGTCTTTTGTATCTACTAACTTGGTTCAG-TCCAAAAGACAATCTGAAATC 1169
|||||||||||||||||||||||||||||||||||| | ||| |||||||||||| || |
Sbjct 1158 TTGGCTCCTTGTCTTTTGTATCTACTAACTTGGTTC-GCTCCTAAAGACAATCTGTAACC 1216
Query 1170 CACT 1173
||||
Sbjct 1217 CACT 1220
> AT4G24940.1 | Symbols: SAE1A, AT-SAE1-1, ATSAE1A | SUMO-activating
enzyme 1A | chr4:12823496-12826200 FORWARD LENGTH=1353
Length=1353
Score = 857 bits (464), Expect = 0.0
Identities = 804/965 (83%), Gaps = 36/965 (4%)
Strand=Plus/Plus
Query 51 GAATGGACGGAGAAGAGCTCACCGAGCAAGAAACTG-CTCTATACGACCGCCAAATTAGG 109
||||||||||||||||||| |||||||| || |||| || | ||||||||||| ||||||
Sbjct 154 GAATGGACGGAGAAGAGCTTACCGAGCAGGAGACTGCCT-TGTACGACCGCCAGATTAGG 212
Query 110 GTTTGGGGCGCTGGTGCTCAAAGAAGATTGAGTAAATCTCATGTTTTGGTATCTGGAATT 169
|||||||||||| |||||| |||||||||| ||| ||||| | |||||||||||||||
Sbjct 213 GTTTGGGGCGCTAATGCTCAGAGAAGATTGACCAAAGCTCATATCTTGGTATCTGGAATT 272
Query 170 AAGGGGACTGTTGCTGAGTTTTGCAAGAACATTGTGTTGGCTGGAGTTGGTAGTGTGACT 229
|||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||
Sbjct 273 AAGGGGACTGTTGCTGAGTTTTGCAAGAACATTGTGCTGGCAGGAGTTGGTTCAGTGACT 332
Query 230 CTATTGGATGATCGGTTGGTTA-CAACGGAAGCATTCAACGCAAACTTCTTGATTCTTCC 288
|| |||||||||| || | | || ||| || || ||||| ||||| ||||||| ||
Sbjct 333 TTAATGGATGATCGTTTAGCAAACAT-GGAGGCCTTGAACGCTAACTTTTTGATTCCGCC 391
Query 289 TGATGAAAATGCTTAT-GTAGGCAAAACCGTAGCTGAGATTTGTTGTGATTCACTTAAGG 347
||||||||||| ||| || |||||||| || |||||||||||| |||||||||| ||||
Sbjct 392 TGATGAAAATGTTTACAGT-GGCAAAACTGTGGCTGAGATTTGTAGTGATTCACTCAAGG 450
Query 348 AATTT-AACCCTATGGTCCATGTTTCAATAGA-AACAGGTGATTTGTCAACATTTGGCGT 405
| ||| ||||||||||||| |||||| |||| || |||||||||||||| |||||
Sbjct 451 A-TTTCAACCCTATGGTCCGTGTTTCCGTAGAGAA-AGGTGATTTGTCAATGCTTGGCAC 508
Query 406 TGATTTTTTCGAGAAGTTTGATGTTGTGGTTATCGGCTACAGTTCTCGTGCTACTAAGAA 465
||||||||| ||| |||||||||| || ||||| ||||| ||||||||||||| || ||
Sbjct 509 TGATTTTTTTGAGCAGTTTGATGTCGTAGTTATAGGCTATGGTTCTCGTGCTACCAAAAA 568
Query 466 AGCA-GTTAATGAAAAATGTAGGAACCTAGCA-AAACGTGTGGCGTTCTATACAGTTGAT 523
| | || |||||||||||| |||| || | |||||||| || ||||||||||| |||
Sbjct 569 AT-ATGTCAATGAAAAATGTCGGAAGTTAA-AGAAACGTGTCGCATTCTATACAGTCGAT 626
Query 524 TGTAGAGGCTCATGTGGCGAAATATTTGTCGACCTGCA-GAATTATAAGTACACAAAGAA 582
||||||| ||||||||| ||||| ||||| ||||| || || ||| ||||||||||||||
Sbjct 627 TGTAGAGACTCATGTGGTGAAATCTTTGTGGACCTCCAAGA-TTACAAGTACACAAAGAA 685
Query 583 AAAGCTTGATGAAACAGTGGAATGTGAACTAACATTT-CCAAGTTTTGAGGAGGC-AGTT 640
||||||||| || | |||||||| ||||||| |||| ||||||||| |||| || | |
Sbjct 686 AAAGCTTGAAGAGATGGTGGAATGCGAACTAA-ATTTTCCAAGTTTTCAGGAAGCTA-TA 743
Query 641 TCAGCACCATGGAAACCGATTCCAAGGAGAACAGCAAAGCTCTACTTTGCAATCAGAGTG 700
|| | |||||||||||||||||| ||||||||||||||||||||||||| || |||||
Sbjct 744 TCGGTACCATGGAAACCGATTCCTCGGAGAACAGCAAAGCTCTACTTTGCTATGAGAGTA 803
Query 701 ATAGAACTATTTGAGGAAACTGAAGGGCGTAAACCTGGGGAATGTTCGCTG-TCTGATCT 759
|||||| | ||||| || | |||||||||||||| ||| ||||||||||| || |||||
Sbjct 804 ATAGAAGTGTTTGAAGAGAGTGAAGGGCGTAAACATGGAGAATGTTCGCTACTC-GATCT 862
Query 760 C-CCAAGAGTTTTG-AAACTCAAAAAGGAACTCTGTGAGGGAAATTCGGTTAGCGAGAAA 817
||| |||| ||| ||| |||||||| |||||||||||| ||| || || |||||||
Sbjct 863 TGCCA-GAGTCTTGGAAA-TCAAAAAGCAACTCTGTGAGGCAAACTCTGTGAGCGAGAGC 920
Query 818 CATATTCCAGATAGCCTCCTGGAGAGACTAGTATC--TGGTAAC-ACAGAATTCCCACCA 874
||||| ||||||| ||| |||||||||| |||| ||||| | || |||||||| |||
Sbjct 921 CATATACCAGATATTCTCTTGGAGAGACT--TATCACTGGTA-CTACTGAATTCCCGCCA 977
Query 875 GCTTGTGCCATCATTGGAGGGAT-TCTAGGACAGGAGGTGATAAAAGTTA-TATCGGGCA 932
| ||||||||| | ||||| || | ||| |||||||||||| |||| | |||| ||||
Sbjct 978 GTTTGTGCCATTGTGGGAGGAATAT-TAGCACAGGAGGTGATCAAAGC-AGTATCAGGCA 1035
Query 933 AAGGAGAGCCGTTGAAGAACTTCTTCTACTTTGATGCAGAGGATGGGAAAGGTGTAATCG 992
||||||| |||||||| ||||||||||||| ||||| || |||||||||||||| || |
Sbjct 1036 AAGGAGACCCGTTGAAAAACTTCTTCTACTATGATGGTGAAGATGGGAAAGGTGTGATGG 1095
Query 993 AAGAC 997
|||||
Sbjct 1096 AAGAC 1100
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 57580025115
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5