BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg495168
Length=1111
Score E
Sequences producing significant alignments: (Bits) Value
AT5G51030.1 | Symbols: | NAD(P)-binding Rossmann-fold superfam... 1753 0.0
> AT5G51030.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr5:20747759-20749506 REVERSE LENGTH=1202
Length=1202
Score = 1753 bits (949), Expect = 0.0
Identities = 1060/1114 (95%), Gaps = 6/1114 (1%)
Strand=Plus/Plus
Query 1 TGGGGGATTGCACCTTTTGACCCACAAAAAGGATGAGAAAATTACGTAAGAGGGAGATGA 60
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct 2 TGGGGGATTGCACCTTTTGACCCACAAAAAGGATGAGAAAATTATGTGAGAGGGAGATGA 61
Query 61 GAACGACGACGAAGCTCTGTGTTCGTTCGTGCCTCCTCTTGTCG-AAAAATAAAACAAAC 119
|||||||||||||||||||||||| ||| ||||||||||| ||| ||||| ||||| ||
Sbjct 62 GAACGACGACGAAGCTCTGTGTTCTTTCTTGCCTCCTCTTATCGTGAAAAT-AAACATAC 120
Query 120 TTAGGATCGTga-aagagagaaaataaggagaaatatggtaggaagcaaagaaaaatcga 178
|||||||||| | ||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct 121 TTAGGATCGT-AGAAGAGAGAAAATAAGAAGAAAGATGGTAGGAAGCAAAGAAAAATCGA 179
Query 179 aagagaaacgagaTAAGAGACTCCAAGAGATCTCCCTCCTACGTACAATTCCCTACTCTG 238
|||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||
Sbjct 180 AAGAGAAACGAGATAAGAGACTCCAAGAGATCTCCCTCCTTCGTACTATTCCCTATTCTG 239
Query 239 ATCACCAGAGGTGGTGGACCTCTGAAACCGTGGCGGTGGTAACAGGTGCAAATAGAGGGA 298
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 240 ATCACCAGAGGTGGTGGACCTCTGAAACCGTGGCGGTGGTAACAGGTGCGAATAGAGGAA 299
Query 299 TAGGATTTGAGATGGTGAGACAATTGGCTGGACATGGATTAACAGTTATTCTAACATCAA 358
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 300 TAGGATTTGAGATGGTGAGACAATTGGCTGGACATGGACTAACAGTTATTCTAACATCAA 359
Query 359 GAGACGAGAATGTAGGTGTCGAAGCCGCCAAGATCCTTCAAGAAGGTGGATTCAATGTTG 418
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 360 GAGACGAGAATGTAGGCGTCGAAGCCGCCAAGATCCTTCAAGAAGGTGGATTCAATGTTG 419
Query 419 ATTTCCACCGCCTCGATATCTTGGACTCTTCCTCAATTCAAGAGTTTTGC-ATATGGATT 477
||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||
Sbjct 420 ATTTCCACCGCCTCGATATCTTGGACTCTTCCTCAATCCAAGAGTTTTGCGA-ATGGATT 478
Query 478 AAAGAAAAATATGGATTGATTGATGTTTTAATAAATAATGCAGGAGTAAACTACAATGTT 537
||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct 479 AAAGAAAAATATGGATTTATTGATGTTTTAATTAATAATGCAGGAGTAAACTACAATGTT 538
Query 538 GGATCAGATAACTCCGTTGAGTTCTCGCATATGGTTATATCTACCAACTACTATGGTACC 597
|||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 539 GGATCAGATAACTCTGTTGAATTCTCGCATATGGTTATATCTACCAACTACTATGGCACC 598
Query 598 AAGAACATAATCAAAGCCATGATTCCATTGATGAGACATGCTTGTCAAGGAGCTCGTATT 657
|||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||
Sbjct 599 AAGAACATAATCAACGCCATGATTCCACTAATGAGACATGCTTGTCAAGGAGCTCGTATT 658
Query 658 GTCAATGTCACTTCAAGGCTCGGTAGATTAAAAGGCCGACACAGTAAACTTGAGAATGAA 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 659 GTCAATGTCACTTCAAGGCTCGGTAGATTAAAAGGCCGACACAGTAAACTTGAGAATGAA 718
Query 718 GCCGTGAGAGCGAAGCTTATGGATGTGGATTCTCTAACAGAAGAAATCGTTGACAAAACA 777
| ||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct 719 GACGTGAGAGCCAAGCTTATGGATGTGGACTCTCTAACTGAAGAAATCGTTGACAAAACA 778
Query 778 GTCTCAGAGTTTTTGAAACAAGTGGAAGAAGGAACATGGGAATCTGGAGGTTGGCCACAT 837
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 779 GTATCAGAGTTTTTGAAACAAGTGGAAGAAGGAACATGGGAATCTGGAGGTTGGCCACAT 838
Query 838 TCTTTCACAGACTACTCTGTCTCGAAAATGGCGGTGAATGCATACACAAGAGTACTAGCA 897
|| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct 839 TCCTTCACAGACTACTCTGTCTCCAAAATGGCGGTGAACGCATACACAAGAGTACTAGCT 898
Query 898 AAAGAACTATCTGAGAGACCAGAGGGAGAGAAAATATATGCAAACTGCTTTTGTCCCGGT 957
||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct 899 AAAGAACTATCCGAGAGACCAGAGGGAGAGAAGATATATGCAAACTGTTTTTGTCCCGGT 958
Query 958 TGGGTGAAAACCGCAATGACGGGTTATGCAGGGAACATCTCAGCAGAAGATGGAGCTGAC 1017
|||||||||||||||||||| || |||||||||||| | |||||||||||||||||||||
Sbjct 959 TGGGTGAAAACCGCAATGACAGGCTATGCAGGGAACGTTTCAGCAGAAGATGGAGCTGAC 1018
Query 1018 ACTGGGGTTTGGCTTGCATTGCTTCCTGATCAAGCTATCACCGGAAAGTTCTTTGCTGAG 1077
||||| || |||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct 1019 ACTGGAGTCTGGCTTGCATTGCTTCCTGATCAAGCTATCACCGGAAAGTTCTTCGCCGAG 1078
Query 1078 AGACGTGAGATCAATTTCTAAAGAGAAGATTGGA 1111
||||||||||||| ||||||| || |||||||||
Sbjct 1079 AGACGTGAGATCAGTTTCTAAGGAAAAGATTGGA 1112
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 54467591325
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5