BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg495199
Length=2159
Score E
Sequences producing significant alignments: (Bits) Value
AT5G51290.1 | Symbols: | Diacylglycerol kinase family protein ... 3295 0.0
> AT5G51290.1 | Symbols: | Diacylglycerol kinase family protein
| chr5:20843998-20848340 REVERSE LENGTH=2264
Length=2264
Score = 3295 bits (1784), Expect = 0.0
Identities = 2021/2137 (95%), Gaps = 10/2137 (0%)
Strand=Plus/Plus
Query 1 TCCGTCTCGGCTCCGCCGTTCGGTTTCCGTTACTATTTTCCAAAATCA-TTCATTTTCTC 59
||||||| |||||||||||||||||||||||| |||||| |||||||| ||||||||||
Sbjct 60 TCCGTCTTGGCTCCGCCGTTCGGTTTCCGTTAATATTTTACAAAATCATTTCATTTTCTT 119
Query 60 TTTTAACTTCC-AAAAATCGAATTTGAGTTGAATCTTCTAAGCTCAAGCT-ATATCGATT 117
||||||||||| ||||||||||||| ||||||||||||||||||||||| ||| |||||
Sbjct 120 TTTTAACTTCCAAAAAATCGAATTT-TGTTGAATCTTCTAAGCTCAAGCTAATACCGATT 178
Query 118 TCGAAATGGAGGAAGGTCGTGACGACGAGGATTCTAGTTTTTCTAATTCCGGCGATCGCG 177
||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct 179 TCGAAATGGAGGAAGGTCGTGACGACGAGTATTGTAGTTTTTCTAATTCCGGCGATCGCG 238
Query 178 ACGGTGGATTGAGCGGTTGTTTTTTCTTGGATCATGTTGGCGAAGTTTTTCTTTCTCGGA 237
||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |
Sbjct 239 ACGGTGGATTGAGCGGTTGTTTTTTCTTGGATCATGTTGGCCAAGTTTTGCTTTCTCGAA 298
Query 238 ATCATGATGGTTTGTCCTGGAAATGTTCGGATTCTTCAGATTGTGAGGGAACAACTTGTT 297
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 299 ATCATGATGGTTTGTCCTGGAAATGTTTGGATTCTTCAGATTGTGAGGGAACAACTTGTT 358
Query 298 TAGGAATTAGAAACTGCGAGAATTTCGAAACTGAGATCAAATTCTCTGATATTTATGCTG 357
| ||||||| || |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 359 TGGGAATTATAATTTGCGAGAATTCCGAAACTGAGATCAAATTCTCTGATATTTATGCTG 418
Query 358 TGGAGTTTGTTAACTATGGTTTGGTGCATAGTCCAAAGTCAGGCCTTAGACATGCCAAAG 417
|||||||||||| |||||| ||||||||||||||||||| ||| ||||||||||||||||
Sbjct 419 TGGAGTTTGTTAGCTATGGCTTGGTGCATAGTCCAAAGTTAGGACTTAGACATGCCAAAG 478
Query 418 AATGTTTCCGGGAACGCTTGTTATATACTCAAGAGATGTATCGGTTCACTGTGCATGGTT 477
||||||||||||||||||||||| |||||||||||||||||||||||||||| || || |
Sbjct 479 AATGTTTCCGGGAACGCTTGTTAAATACTCAAGAGATGTATCGGTTCACTGTCCACGGAT 538
Query 478 TTCAAAGTTCACCAAAGGAGCCTTGTCTTTGGAAACTTGCCGCTTTCACTTTTGGCCATA 537
|||||||||||||||| ||||||||||||||||| ||||| || ||||||||||| ||||
Sbjct 539 TTCAAAGTTCACCAAAAGAGCCTTGTCTTTGGAACCTTGCTGCATTCACTTTTGGACATA 598
Query 538 TGGATTTGCAGACGTGCCAGAGTTGGATGGATCAATTGAATTACTCTTTGATTAAGGAAG 597
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 599 TGGATTTGCAGACGTGCCAGAGTTGGATGGATCAATTGAATTACTCTTTGATCAAGGAGG 658
Query 598 TAGAAAGACCAAGATATCTTTTGGTATTCGTCCATCCAAAAAGTGGCAAAGGAAATGGCT 657
|||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct 659 TAGAAAGACCAAGAAATCTTTTGGTATTTGTCCATCCAAAAAGTGGTAAAGGAAATGGCT 718
Query 658 CCAAGGTCTGGGAAACTGTTTCCCAGATTTTTATTCGCGCTAAAGTTAATACCAAGGTGA 717
||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||
Sbjct 719 CCAAGGTCTGGGAAACTGTTTCCAAGATTTTCATTCGCGCTAAAGTTAATACAAAGGTGA 778
Query 718 TTGTAACAGAACGAGCAGGACATGCATTTGATGTAATGGCATCTATCCAAAACAAAGAGC 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 779 TTGTAACAGAACGAGCAGGACATGCATTTGATGTAATGGCATCTATCCAAAACAAAGAGC 838
Query 778 TCCATTCATATGATGGCATCATAGCTGTTGGTGGGGATGGTTTCTTCAACGAAATCCTTA 837
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 839 TCCATACATATGATGGCATCATAGCTGTTGGTGGGGATGGTTTCTTCAACGAAATCCTTA 898
Query 838 ATGGATATCTTTTGTCGAGACTTAAAGTCCCTCTTCCACCAAGTCCTTCAGATTCCTTCA 897
|||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 899 ATGGGTATCTCTTGTCGAGACTTAAAGTCCCTCTTCCACCTAGTCCTTCAGATTCCTTCA 958
Query 898 ATTCTGCTCAAAGTAGAGCTAGCTCCTCAGTTGCAGAATCAGGAGATGCAGTTCATGAGA 957
|||||| ||||||||||| ||||||||||||| ||||| ||||||||| |||||||||||
Sbjct 959 ATTCTGTTCAAAGTAGAGGTAGCTCCTCAGTTCCAGAACCAGGAGATGAAGTTCATGAGA 1018
Query 958 CTGACCAAAAGGAACACTATCCTCTACTTCCTGACTCAGTTCAAGAGGTTATGAATTTCA 1017
||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||
Sbjct 1019 CTGACCAAAAGGAACACTATCCTCTTCTTCCTGATTCAGTTCAAGAGGTCATGAATTTCA 1078
Query 1018 GGACAGTCAATGGCTCATGTGAAGGAATTGAATATCTTGATCATCCCTTCACTGGTGGAA 1077
||||||||||||| |||||||||||||||||| ||| ||||||||||||| | ||| ||
Sbjct 1079 GGACAGTCAATGGGTCATGTGAAGGAATTGAAGATCCCGATCATCCCTTCAGTAGTGAAA 1138
Query 1078 GGCCTCGATTTGGCCTCATCCCGGCAGGTTCAACTGATGCAATAGTTATGTGCACCACAG 1137
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1139 GGCCTCGATTCGGCCTCATCCCGGCAGGTTCAACTGATGCAATAGTTATGTGCACCACAG 1198
Query 1138 GAGCTCGTGATCCTGTAACATCTTCGCTGCATATCATTCTAGGAAGAAAGCTCTTCCTTG 1197
|||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct 1199 GAGCTCGTGATCCTGTAACATCAGCGCTGCATATCATTCTAGGTAGAAAGCTCTTCCTTG 1258
Query 1198 ATGCAATGCAGGTTGTGCGGTGGAAAACAGCATCAACCTCGACGATTGAACCTTACATTC 1257
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1259 ATGCAATGCAGGTTGTGCGGTGGAAAACAGCATCAACCTCGACGATTGAACCTTATATTC 1318
Query 1258 GTTATGCAGCCTCATTCGCTGGATACGGGTTTTATGGTGATGTCATTTCAGAAAGTGAAA 1317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1319 GTTATGCAGCCTCATTCGCTGGATACGGGTTTTATGGTGATGTCATTTCAGAAAGTGAAA 1378
Query 1318 AATATCGGTGGATGGGTCCCAAACGCTATGATTACGTTGGAACTAAGATATTCTTGAAGC 1377
||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct 1379 AATATCGGTGGATGGGTCCCAAACGCTATGACTATGTTGGAACTAAGATATTCTTGAAGC 1438
Query 1378 ACAGATCATATGAGGCAGAGGTAACGTATGAAGAAGCTGAATCAGAGAACTCTAAAGCTT 1437
|||||||||| ||||||||||||| || ||||||||||||||||||||| ||||||||||
Sbjct 1439 ACAGATCATACGAGGCAGAGGTAATGTTTGAAGAAGCTGAATCAGAGAATTCTAAAGCTT 1498
Query 1438 CCCTACACT-CGCGGAGTAAGACATGGCCATTTCGAAATACCTCAAGATCAGAGAAAATA 1496
||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1499 CCCTACA-TACGCGGAGTAAGACATGGCCATTTCGAAATACCACAAGATCAGAGAAAATA 1557
Query 1497 CTATGTCGTGCGAACTGCA-GCATATGTAACAGTAAGGTTGGTGGGAATATTGTAAGCAC 1555
||||||||||| || |||| | || |||||||||||||||||| |||| | || ||||||
Sbjct 1558 CTATGTCGTGCAAATTGCAAG-ATTTGTAACAGTAAGGTTGGTTGGAACAGTGCAAGCAC 1616
Query 1556 AACACCCAACTCCTGTCCAGAAAAAACAAGATGGTGTAGAACGAAAGGGCGGTTTTTGAG 1615
||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1617 AACACTTAACCCCTGTCCAGAAAAAACAAGATGGTGTAGAACGAAAGGACGGTTTTTGAG 1676
Query 1616 TATAGGTGCTGCAGTGATGTCAAACCGAAATGAAAGAGCACCTGATGGGCTTGTCGTGGA 1675
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1677 TATAGGTGCTGCAGTGATGTCAAACCGAAATGAAAGAGCACCTGATGGGCTTGTTGTGGA 1736
Query 1676 TGCACATCTTTCAGATGGTTTCCTTCACCTCATACTCATTAAGGATTGTTCTCGTCCCAA 1735
|||||| || || || ||||||||||| ||||||||||| || |||||||||||||||||
Sbjct 1737 TGCACACCTCTCCGACGGTTTCCTTCATCTCATACTCATAAAAGATTGTTCTCGTCCCAA 1796
Query 1736 GTACTTATGGCACCTTACCGAGCTTGCGAAAAGAGGTGGAGAACCTTTGAACTTCGAGTT 1795
||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1797 GTACTTATGGCACCTAACCGAGCTTGCAAAAAGAGGTGGAGAACCTTTGAACTTCGAGTT 1856
Query 1796 TGTGGAATATCACAAGACGCGAGCTTTCACATTTACATCATTTGGGGAAGAGAGTGTGTG 1855
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1857 TGTGGAATATCACAAGACGCGAGCTTTCACGTTTACATCATTTGGGGAAGAGAGTGTGTG 1916
Query 1856 GAATTTGGACGGAGAGATCTTTGAGGCTCACCAATTATCAGCTCAAGTCTTGCGTGGCCT 1915
|||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 1917 GAATTTGGACGGAGAGATCTTTGAGGCTCACCAATTATCAGCCCAAGTATTGCGTGGCCT 1976
Query 1916 TATACCTCTGTTCGCATCTGGTCCAGAGATATAACAACATGCATGTGAATGTGGTTTTAT 1975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1977 TATACCTCTGTTCGCATCTGGTCCAGAGATATAACAACATGCATGTGAATGTGGTTTTAT 2036
Query 1976 ATGGAGCGTT-GTGCATAGTTAGTGACCCAAGTGAAAAAGCTATATGAGATTGGAAACTA 2034
||| ||| || |||||||||||||||||||||||||||||| | |||||| |||||||||
Sbjct 2037 ATGAAGCTTTTGTGCATAGTTAGTGACCCAAGTGAAAAAGCCAAATGAGACTGGAAACTA 2096
Query 2035 GAAAAGTATAATAGTGAACATCACAATGTTGCCAAAAAAGGAACAAGGCAAACATATTAT 2094
||||||| | ||||||||||| ||||||||||||||||| ||||| ||||||||||||||
Sbjct 2097 GAAAAGTCTTATAGTGAACATGACAATGTTGCCAAAAAAAGAACATGGCAAACATATTAT 2156
Query 2095 AGTATCCAAGAACTTCAAGATGTAACCATTGAAGATT 2131
||||||||| || ||| |||||||||||||| |||||
Sbjct 2157 AGTATCCAAAAA-TTCGAGATGTAACCATTGGAGATT 2192
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 107077762485
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5