BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg495263
Length=1983
Score E
Sequences producing significant alignments: (Bits) Value
AT5G51950.1 | Symbols: | Glucose-methanol-choline (GMC) oxidor... 3044 0.0
AT5G51930.1 | Symbols: | Glucose-methanol-choline (GMC) oxidor... 898 0.0
AT3G56060.1 | Symbols: | Glucose-methanol-choline (GMC) oxidor... 662 0.0
> AT5G51950.1 | Symbols: | Glucose-methanol-choline (GMC) oxidoreductase
family protein | chr5:21105909-21108605 REVERSE LENGTH=1991
Length=1991
Score = 3044 bits (1648), Expect = 0.0
Identities = 1881/1991 (94%), Gaps = 26/1991 (1%)
Strand=Plus/Plus
Query 1 TAAAGAATCAAACTTAATCTTTCACCCATAATGGGTTTACAAAGATTATGGTTATTTCGC 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 17 TAAAGAATCAAACTTAATCTTTCACCCATAATGGGTTTACAAATATTATGGTTATTTCGC 76
Query 61 ATAATTTTCATCGTAACATACATCTCCCATGCCTCGTGTT-TGCCAGATAAAGCTGGCTA 119
| ||| |||||| | |||||||||| |||||||||||||| | |||||||||||||||||
Sbjct 77 AAAATATTCATCATCACATACATCTTCCATGCCTCGTGTTCT-CCAGATAAAGCTGGCTA 135
Query 120 TTACAGTTTTATGAAAGATGCAACATCGGCACCAATGTTCGCTCGGTTTGATTACATAGT 179
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 136 TTACAGTTTTATGAAAGATGCAACATTAGCACCAATGTTCGCTCGGTTTGATTACATAAT 195
Query 180 CATCGGAGGAGGAACTTCGGGTTGCTCGTTAGCCGCAACGCTAGCTCAAAACGCTAGCGT 239
|||||||||||| |||||||||||| |||||||||| |||||| ||||||||||||||||
Sbjct 196 CATCGGAGGAGGGACTTCGGGTTGCGCGTTAGCCGCGACGCTATCTCAAAACGCTAGCGT 255
Query 240 TTTGGTTCTTGAACGTGGTGGCGCTCCCTACGACAATCCGACGGCAACGGATATCGAAAA 299
||||||||||||||| ||||| ||||||||||||||||| |||||||| |||||||||||
Sbjct 256 TTTGGTTCTTGAACGCGGTGGTGCTCCCTACGACAATCCTACGGCAACAGATATCGAAAA 315
Query 300 CTTTGCCACCACACTCTCAAACACATCACCCAATTCTTGGTCGCAGCTTTTTGTCTCCGA 359
|||||||||||||||||||||||||||||| || ||||||||||| |||||| |||||||
Sbjct 316 CTTTGCCACCACACTCTCAAACACATCACCGAAATCTTGGTCGCAACTTTTTATCTCCGA 375
Query 360 GGACGGCGTTTACAACACTCGTGCACGCGTCCTCGGTGGTGGCTCGGTGTTAAACGCCGG 419
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 376 GGACGGCGTTTACAACACTCGTGCACGCGTCCTCGGTGGTGGCTCCGTGTTAAACGCCGG 435
Query 420 GTTCTACACTCGTGCGGGAGAAGAGTACGTTAAGGAGACTGAGTGGAAGAGC-GATGAAG 478
||||||||| ||||||||||| |||||||| ||||||||||||||||||| | |||||||
Sbjct 436 GTTCTACACACGTGCGGGAGATGAGTACGTGAAGGAGACTGAGTGGAAGA-CTGATGAAG 494
Query 479 TGGAAGCTGCTTACGAGTGGGTCGAGAAGAAAGTGGCGTTTCAACCGCCGGTGATGGGAT 538
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 495 TGGAAGCTGCTTACGAGTGGGTCGAGAAGAAAGTGGCGTTTCAACCGCCGGTTCTGGGAT 554
Query 539 GGCAAACGGCGTTTAAAGATGGGCTTTTGGAGGCTGGTGAGTTTCCGTACAACGGTTTCA 598
|||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct 555 GGCAAACGGCGTTTAAAGATGGGCTTTTGGAGGCTGGTGAGTTTCCTTACAATGGTTTCA 614
Query 599 CGTATGATCATATTTATGGGACTAAGATCGGTGGTACGATCTTTGACCGTGCTGGTCATA 658
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 615 CGTATGATCATATCTATGGGACTAAGATCGGTGGTACGATCTTTGACCGTGCTGGTCATA 674
Query 659 GACACACGGCCGCTGATTTGTTGGAATATGCTAATCCGGGCAACATCGTTGTCTACTTGC 718
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 675 GACACACGGCCGCTGATTTGTTGGAATATGCTAATCCGGGCAACATTGTTGTCTACTTGC 734
Query 719 ATGCCTCTGTTCACAAGATCCTCTTCACCACCAAAGGACGGCCAAGGCCAAAAGCATACG 778
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 735 ATGCCTCTGTTCACAAGATCCTCTTCACCACCAAAGGAAGGCCAAGGCCAAAAGCATACG 794
Query 779 GAGTGATATTTCAAGACGCCAACGGTGTGATACACAAGGCAGAGTTAGAGAAGAATGCAA 838
||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||| |||
Sbjct 795 GAGTGATATTTCAAGACGCGAACGGAGTGTTACACAAGGCAGAGTTAGAGAAGAATTCAA 854
Query 839 TGAATGAGGTGATTTTGTCCGCGGGGGCCATTGGGAGCCCGCAATTGTTGATGCTGAGTG 898
|||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 855 TGAACGAGGTGATTTTGTCCGCGGGGGCGATTGGGAGCCCGCAATTGTTGATGCTGAGCG 914
Query 899 GCATAGGTCCCGCGGCTCATCTCACAGCTCACGGGATTAAACCGGTGGTCTTAGATCATC 958
||||||||||||| ||||||||| | |||||||||||||||||| |||||||||||||||
Sbjct 915 GCATAGGTCCCGCAGCTCATCTCGCGGCTCACGGGATTAAACCGTTGGTCTTAGATCATC 974
Query 959 CGATGGTAGGGCAAGGGATGGGAGATAATCCGATGAATGCCATATTTATTCCGTCTCCTA 1018
|||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||
Sbjct 975 CGATGGTAGGGCAAGGTATGGGAGATAATCCCATGAATGCCATATTTATTCCTTCTCCTA 1034
Query 1019 CGCCCGTCGAGGTTTCTCTAATACAAGTCGTTGGGATCACAAAGTTTGAAAGTTACATTG 1078
||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct 1035 CGCCCGTGGAGGTTTCTCTAATACAAGTCGTTGGAATCACAAAGTTTGAAAGTTACATAG 1094
Query 1079 AAGGAGCAAGTGGTGTCATCTTCTCTTATAGTTGGACTCGTAGATTTTTCGATGGTGTTT 1138
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1095 AAGGAGCAAGTGGTGTAATCTTCTCATATAGTTGGACTCGTAGATTTTTCGATGGTGTTT 1154
Query 1139 TGAATTATCTCAACGAGATTCAGACAAGCCGTACTACGAGTACTACATCTCCAACACTGT 1198
||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 1155 TGAATTATCTCAACGAGATGCAGACAAGCCGTACTACTAGTACTACATCTCCAACACTGT 1214
Query 1199 CGACCCAATCCATCACAGATTTTTTCAAATCC-A--A-TCCTCTATTGAATGCGACCACA 1254
|||||||||||||||||||||||||||| ||| | | ||||||||||||||| |||||
Sbjct 1215 CGACCCAATCCATCACAGATTTTTTCAA-TCCCATCAATCCTCTATTGAATGCTACCACG 1273
Query 1255 AGAGCCGGTTTGATCCTCCAAAAAATTGCGGGACCAATCTCGAGAGGTCATTTGGAGCTT 1314
|||||||||||||||||||| ||||| |||||||| ||||||||||||||||| ||||||
Sbjct 1274 AGAGCCGGTTTGATCCTCCAGAAAATCGCGGGACCGATCTCGAGAGGTCATTTAGAGCTT 1333
Query 1315 AGGAACACAAACCCAGATGATAATCCTTCAGTAAGGTTCAACTATTATCAAGAGCCAGAG 1374
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1334 AGGAACACAAACCCGGATGATAATCCTTCAGTAAGGTTCAACTATTATCAAGAGCCAGAG 1393
Query 1375 GATCTACAGATATGTGTTGAAGGGATCAACACCATTATCAAAGTGATCAACTCCAAGGCA 1434
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1394 GATCTACAGATATGTGTTGAAGGGATCAACACCATTATTAAAGTGATCAACTCCAAGGCA 1453
Query 1435 TTCTCCAAATTCAAGTACCCGGACGCGACGATACATGGACTACTTGATCTAATGCTAAGC 1494
||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 1454 TTCTCCAAATTCAAGTACCCGGACGCGACCATACATGGACTACTCGATCTAATGCTAAGC 1513
Query 1495 GTTCCTACCAATCTGAGGCCGCGGCACATAACCTCGATGTTCAATTTGAAG-CAGTTTTG 1553
|||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||
Sbjct 1514 GTTCCTACCAATCTGAGGCCGCGGCATATAACCTCGATGTTCAATTT-AAGGCAGTTTTG 1572
Query 1554 CATAGACACTGTGATGACAATTTGGCACTACCATGGAGGTTGCCAAGTTGGAAGAGTGGT 1613
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1573 CATTGACACTGTGATGACAATTTGGCACTACCATGGAGGTTGCCAAGTTGGAAGAGTGGT 1632
Query 1614 TGACAAGAATTACAGAATCTTAGGCATCGATTCATTAAGGGTCATCGATGGATCCACATT 1673
|||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||
Sbjct 1633 TGACAAGAATTACAGAGTCTTAGGCATTGATTCCTTAAGGGTCATCGATGGATCCACATT 1692
Query 1674 TCTCAAGTCTCCGGGGACTAATCCTCAAGCTACGGTTATGATGCTCGGAAGGTACATGGG 1733
||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct 1693 TCTCAAGTCTCCGGGGACTAATCCTCAAGCTACTGTTATGATGCTCGGAAGGTATATGGG 1752
Query 1734 CCAAAGGATTCTTCAAGAGAGGGCGA-ATTACCGCAAAACGGATAAAGAAGCGTGAGATA 1792
||||||||||||||||||||||| || || || |||| |||||||||||||||||||||
Sbjct 1753 CCAAAGGATTCTTCAAGAGAGGGAGATAT-ACAACAAACCGGATAAAGAAGCGTGAGATA 1811
Query 1793 TTACTTAGAGACATTTGCTAAGAAAATCTTGATCTTGGAATTGTTCTAATCAATGTATGA 1852
|||||| | |||| | |||||||||||||||||||||||| ||||||||||||||
Sbjct 1812 TTACTT-GT----TTTG--A-GAAAATCTTGATCTTGGAATTGTTTTAATCAATGTATGA 1863
Query 1853 TGAACTTAAAGAGTATGAATGTGTACATCTGTCCATGTTCTGTTTCTAATATGTATAATA 1912
| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1864 TTAACTTAAAGAGTATGAATGTGTACATCTGTTCATGTTCTGTTTCTAATATGTATAATA 1923
Query 1913 ATGATATAGGGGAATTATGGAACTTGGGGCTTCTAGTTTTGCAAAATTTAGGAATATGAT 1972
||| | || |||||||| |||||||||||||||||||||| ||||| |||||||||
Sbjct 1924 ATGGT---GG--AATTATGGTACTTGGGGCTTCTAGTTTTGCAGAATTTCGGAATATGAG 1978
Query 1973 TCCAGTATTAT 1983
|| ||||||||
Sbjct 1979 TCTAGTATTAT 1989
> AT5G51930.1 | Symbols: | Glucose-methanol-choline (GMC) oxidoreductase
family protein | chr5:21101123-21103568 FORWARD LENGTH=1749
Length=1749
Score = 898 bits (486), Expect = 0.0
Identities = 1295/1667 (78%), Gaps = 130/1667 (8%)
Strand=Plus/Plus
Query 110 AAGCTGGCTATTACAGTTTTATGAAAGATGCAACATCGGCACCAATG-TTCGCTCGGTTT 168
||||||| | |||| ||||||||||||||||||| |||||||| | | ||| ||||
Sbjct 163 AAGCTGGAGACTACA--TTTATGAAAGATGCAACATTGGCACCAAAGAAT-GCT-AGTTT 218
Query 169 -GATTACATAGTCATCGGAGGAGGAACTTCGGGTTGCT-CGTTAGCCGCAACGCTAGCTC 226
|| |||||| |||||||||||||||| | ||||| | | |||||||||||||| |||
Sbjct 219 CGACTACATAATCATCGGAGGAGGAACCGCAGGTTG-TGCATTAGCCGCAACGCTCTCTC 277
Query 227 AAAACGCTAGCGTTTTGGTTCTTGAACGTGGTGGCGCTC-CC-TACGACAATCCGACGGC 284
||||||| |||||||||||||||||||| || || | || || || || || || |||||
Sbjct 278 AAAACGCCAGCGTTTTGGTTCTTGAACGCGGCGG-G-TCGCCATATGAGAACCCCACGGC 335
Query 285 AACGGATATCGAAAACTTTGCCACCACACTCTCAAAC-ACATCACCCAATTCTTGGTCGC 343
|| ||||| | |||| | || |||||||| |||| ||| |||| || || |||||||
Sbjct 336 CACTGATATGGGCAACTCCGTCAACACACTCTTAAACAACA-CACCAAACTCATGGTCGC 394
Query 344 AGCTTTTTGTCTCCGAGGACGGCGTTTACAACACTCGTG-CACGCGTCCTCGGTGGTGGC 402
||||||| ||||||| ||||||||||||||||| || | |||| ||||||||||| ||
Sbjct 395 AGCTTTTCATCTCCGAAGACGGCGTTTACAACACGCG-GCCACGTGTCCTCGGTGGAGGG 453
Query 403 TCGGTGTTAAACGCCGGGTTCTACACTCGTGCGGGAGAA-GAGTACGTTAAGG-AGACTG 460
|||||| |||||| || |||||| | |||||||| || || ||||| ||| || |||
Sbjct 454 TCGGTGATAAACGGAGGATTCTACTCGCGTGCGGG-CAATGATTACGTGGAGGAAG-CTG 511
Query 461 AGTGGAAGA-GCGATGAAGTGGAAGCTGCTTACGAGTGGGTCGAGAAGAAAGTGGCGTTT 519
||||| ||| | || |||||||||||||||||||||||||||||||||||| | | |||
Sbjct 512 AGTGGGAGATG-GAAGAAGTGGAAGCTGCTTACGAGTGGGTCGAGAAGAAACTTGTGTT- 569
Query 520 CAA-CCGCCGGTGATGGGATGGCAAACGGCGTTTAAAGATGGGCTTTTGGAGGCTGGTGA 578
| | || | || || | |||||||| ||||||||||||||||||| |||||||||| ||
Sbjct 570 CGAGCCACAAGTAATAGAATGGCAAAAGGCGTTTAAAGATGGGCTTCTGGAGGCTGGAGA 629
Query 579 GTTTCCGTACAACGGTTTCACGTATGATCATATTTATGGGACTAAGATCGGTGGTACGAT 638
|| |||| |||||||||||||||| |||||||| || || ||||||||||||||||| ||
Sbjct 630 GTCTCCGGACAACGGTTTCACGTACGATCATATCTACGGCACTAAGATCGGTGGTACAAT 689
Query 639 CTTTGACCGTGCTGGTCATAGACACACGGCCGCTGATT-TGTTGGAATATGCTAATCCGG 697
|||||||||||||||||||||||| || || || || | |||| || |||||||||||
Sbjct 690 CTTTGACCGTGCTGGTCATAGACATACCGCGGC-GAATCTGTTAGAGTATGCTAATCC-- 746
Query 698 GCAAC---ATCGTTGTCTACTTGCATGCCTCTGTTCACAA-GATCCTCTTCACCACCAAA 753
|||| || ||||| ||||||||||| ||||||||||| | ||||||||||||||
Sbjct 747 -CAACCGGATTGTTGTTTACTTGCATGCTTCTGTTCACAAAG-TCCTCTTCACCACC--- 801
Query 754 GGACGGCCAAGGCCAAAAGCATACGGAGTGATATTTCAAGACGCCAACGGTGTGATACAC 813
| | | | | | || | |||| ||||| | || || || || ||| | |||
Sbjct 802 G-A-----A-G-C-----GTAT--GAAGTGCTATTTGAGGATGCAAATGGAGTGTTCCAC 846
Query 814 AAGGCAGAGT-TAG-AGAAGAATGCAATGAATGAGGTGATTTTGTCCGCGGGGGCCATTG 871
|||||| | | ||| | || || |||| ||| || ||||| ||||| || || ||| | |
Sbjct 847 AAGGCAAA-TCTAGCA-AATAAGGCAACGAACGAAGTGATCTTGTCAGCTGGAGCCCT-G 903
Query 872 GG-AGCCCGCAATTGTTGATGCTGAGTGGCA-TAGGTCCCGCGGCTC-ATCTCACAG-CT 927
|| ||||| ||| | || ||| ||||||| | ||||||| || | || |||| || ||
Sbjct 904 GGTAGCCCACAACTATTAATGTTGAGTGG-AGTAGGTCCTGCCG-TCCATCTTG-AGGCT 960
Query 928 CACGG-GATTAAACCGGTGGTCTTAGATCATCCGATGGTAGGGCAAGGGATGGGAGATAA 986
||||| | | || || | ||| ||||||| || ||||| ||||| ||||||| |||||
Sbjct 961 CACGGCG-TGAACCCACTCGTCCTAGATCAGCCCATGGTTGGGCAGGGGATGGCTGATAA 1019
Query 987 TCCGATGAA-TGCCATATTTATTCCGTCTCCTACGCCC-GTCGAGGTTTCTCTAATACAA 1044
||| ||||| | || ||||| |||||| | || || || | || || ||||||
Sbjct 1020 TCCCATGAACTTTG-TAGCCATTCCTTCTCCT-CAACCAGTAGAACTATCCCTCATACAA 1077
Query 1045 G-TCGTTGGGATCACAAAGTTTGAAAGTTACATTGAAGGAGC-AAGTGG-TGTCA-TCTT 1100
| | |||||||||||||||||||| |||||||||||||| | |||||| | | | |||
Sbjct 1078 GCT-GTTGGGATCACAAAGTTTGATAGTTACATTGAAGGT-CTAAGTGGCT-TGAGTCT- 1133
Query 1101 CTCTTATAGTTGGA-CTCGTAGATTTTTCGATGGTGTTTTGAAT-TATCTCAACGAGATT 1158
||||| | | | | ||||||| ||||||||||||||||||||| | | | |||||||
Sbjct 1134 CTCTTTT-GATATAACTCGTAGGTTTTTCGATGGTGTTTTGAATCTTT-TAAACGAGA-- 1189
Query 1159 CAGACAAGCCGTACTACGAGTACTAC-ATCTCCAA-CACTGTCGACCCAATCCATCACAG 1216
|| | | | |||||| | | ||| | || | ||| ||||||||||| |||
Sbjct 1190 CA-A---GTCATACTAC-A-T-CTAGGAA----AATC-CTG---ACCCAATCCATTGCAG 1234
Query 1217 ATT-TTTTCAAATCCAATCCTCT-A--TTG-AATGCGACCAC-AA-GAGCCGGTTTGATC 1269
| |||| ||||| | | | | ||| || | || | || | | |||||||||
Sbjct 1235 -TCCTTTTAAAATCTTTTGATGTTAAATTGGAA-GTGAGGATGAATGGG--GGTTTGATC 1290
Query 1270 CTCCAAAAAATTGCGGGACCAATCTCGAGAGGTCATTTGGAGCTTA-GGAACACAAACCC 1328
| |||||| | | ||||| ||| | ||| ||| || |||| | ||||||| |||||
Sbjct 1291 TTTCAAAAAGTCGATGGACCGGCCTCAAAAGGACATATGAAGCT-ACGGAACACGAACCC 1349
Query 1329 AGATG-ATAATCCTTCAGTAAGGTTCAACTATTATCAAGAGCCAGAGGATCT-A-CAGAT 1385
| | | ||||||||||||| | |||||||| |||||||| ||||||||| | | || |
Sbjct 1350 A-AGGGATAATCCTTCAGTGACATTCAACTACTATCAAGAACCAGAGGATTTGAACA-AG 1407
Query 1386 ATGTGTTGAAGGGATCAACACCATTATCA-AAGTGATCAACTCCAAGGCATTCTCCAAAT 1444
|||||| ||||| | ||||||||||| | || |||| || ||||| || |||||||| |
Sbjct 1408 -TGTGTTAAAGGGCTTAACACCATTATTAGAA-TGATAAATTCCAAAGCTTTCTCCAAGT 1465
Query 1445 TCAAGTACCCGGACGCGACGATACATGGACTACTTGATCTAATGCTAAGCG-TTCCTACC 1503
|||||| |||| | |||| || || ||| || |||| ||| | || |||| | |
Sbjct 1466 ACAAGTATCCGGGTGTGACGGCACGTGAACTGCTCAATCTCATGTTG-GCCCTTCCCATC 1524
Query 1504 AATCTGAGGCCGCGGCACATAACCTC-GATGTTCAATTTGAAGCAGTTTTGCATAGACAC 1562
||| ||||||| ||||| | ||||| | |||||| ||||||||||||||||| |||||
Sbjct 1525 AATTTGAGGCCAAGGCACGTGACCTCAGC-GTTCAACTTGAAGCAGTTTTGCATCGACAC 1583
Query 1563 TGTGATGACAATTTGGCACTACCATGGAGGTTGCCAAGTTGGAAGAGTGGTTGACAAGAA 1622
|||| || ||||||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct 1584 CGTGACGAGTGTTTGGCATTACCATGGAGGTTGCCAAGTTGGAAAAGTGGTTGACAAGAA 1643
Query 1623 TTACAGAA-TCTTAGGCATCGATT-CATTAAGGGTCATCGATGGATCCACATTTCTCAAG 1680
||||| || |||||||||| ||| | |||||||||||||||||||||||||||||||||
Sbjct 1644 TTACA-AAGTCTTAGGCATAGATGGC-TTAAGGGTCATCGATGGATCCACATTTCTCAAG 1701
Query 1681 TCTCCGGGGACTAATCCTCAAGCTACGGTTATGATGCTCGGAAGGTA 1727
||||| ||||||||||||||||| ||||| |||||||| ||||||||
Sbjct 1702 TCTCCCGGGACTAATCCTCAAGCCACGGTCATGATGCTTGGAAGGTA 1748
> AT3G56060.1 | Symbols: | Glucose-methanol-choline (GMC) oxidoreductase
family protein | chr3:20803133-20806013 REVERSE LENGTH=1959
Length=1959
Score = 662 bits (358), Expect = 0.0
Identities = 854/1090 (78%), Gaps = 48/1090 (4%)
Strand=Plus/Plus
Query 81 CATCTCCCATGCCTCGTGTT-TGCCAGATAAAGCTGGCTATTACAGTTTTATGAAAGATG 139
||||| ||| | |||||||| | || ||| ||||||| | || || |||||||||||||
Sbjct 81 CATCTTCCACGACTCGTGTTATTCC-GATGAAGCTGGAAACTATAGATTTATGAAAGATG 139
Query 140 CAACATCGGCACCAATGTTCGCTCGGTTTGATTACATAGTCATCGGAGGAGGAACTTCGG 199
|||||| ||||||| ||| ||| || || |||||| |||||||||||||||| | |
Sbjct 140 CAACATTAGCACCAAAGTTATCTCACTTCGACTACATAATCATCGGAGGAGGAACCGCTG 199
Query 200 GTTGCT-CGTTAGCCGCAACGCTAGCTCAAAACGCTAGCGTTTTGGTTCTTGAACGTGGT 258
| || | | |||||||||||||| |||||||||| | |||| | || || ||||| ||
Sbjct 200 GATG-TGCATTAGCCGCAACGCTCTCTCAAAACGCAACCGTTCTAGTCCTCGAACGCGGA 258
Query 259 GGCGCTCCC-TACGACAATCCGA-CGGCAACGGATATCGAAAACTTTGCCACCACACTCT 316
|| | ||| |||||| |||| | ||||||| || |||| |||||| || | ||||||||
Sbjct 259 GGTTC-CCCTTACGACGATCC-AGCGGCAACAGACATCGGAAACTTCGCAAACACACTCT 316
Query 317 CAAACACATCACCCAATTCTTGGTCGCAGCTTTTTGTCTCCGAGGACGGCGTTTACAACA 376
|||| | | || || || |||||||||||||| ||||||| |||||||||| ||||
Sbjct 317 TGAACATAACTCCAAACTCATGGTCGCAGCTTTTCATCTCCGAAGACGGCGTTTTCAACT 376
Query 377 CTCGTGCACGCGTCCTCGGTGGTGGCTCGGTGTTAAACGCCGGGTTCTACACTCGTGCGG 436
| || || || || |||||||| ||| | || ||||||| || |||||| | |||||||
Sbjct 377 CACGCGCTCGTGTACTCGGTGGAGGCACAGTCATAAACGCAGGATTCTACTCACGTGCGG 436
Query 437 GAGAAGAGTACGTTAAGG-AGAC-TGAGTGGAAGAGCGATGAAGTGGAAGCTGCTTACGA 494
|||||| | ||| || || | || ||| |||| || || || ||||| ||||||||
Sbjct 437 AAGAAGATTTCGTGGCGGAAG-CAGGA-TGGGAGAGAGACGAGGTCGAAGCGGCTTACGA 494
Query 495 GTGGGTCGAGAAGAAAGTGGCGTTTCAACCGCCGGTGATGGGATGGCAAACGGCGTTTAA 554
|||||||||||||||||||| ||| |||| ||||| | ||||||| | ||||||
Sbjct 495 GTGGGTCGAGAAGAAAGTGGTTTTTGAACCACCGGTTAACAAATGGCAATCAGCGTTTCG 554
Query 555 AGATGGGCTTTTGGAGGCTGGTGAGTTTCCGTACAACGGTTTCACGTATGATCATATT-T 613
||||||||||||||| ||||||| | ||| ||||| ||||||||||| || ||||| |
Sbjct 555 AGATGGGCTTTTGGAAGCTGGTGTGACTCCATACAATGGTTTCACGTACGAACATATCGT 614
Query 614 ATGGGACTAAGATC-GGTGGTACGATCTTTGACCGTGCTGGTCATAGACACACGGCCGCT 672
||||||||| || ||||||||||| |||||||| | |||||||||||||||||| ||
Sbjct 615 -TGGGACTAA-ATTTGGTGGTACGATATTTGACCGGGATGGTCATAGACACACGGCGGC- 671
Query 673 GA-TTTGTTGGAATATGCTAATCCGGGCAACATCGTTGTCTACTTGCATGCCTCTGTTCA 731
|| ||||||||| |||||||||||| || || ||||||||||||||||| ||||| ||
Sbjct 672 GAATTTGTTGGAGTATGCTAATCCGAACATGATAGTTGTCTACTTGCATGCTTCTGTCCA 731
Query 732 CAAGATCCTCTTCACCACCAAAGG-ACGGCCA-AGGCCAAAAGCATACGGAGTGATATTT 789
|||||||||||||| | ||||| | ||| ||||| |||||||| || |||||||||
Sbjct 732 TAAGATCCTCTTCACTATTAAAGGTAA--CCAGAGGCCCAAAGCATATGGGGTGATATTT 789
Query 790 CAAGACGCCAACGGTGTGATAC-ACAAGGCAGAGTTAG-A--G-AAGAAT-G-CAATGAA 842
| ||||| || || ||| | | |||||||||| || | | | |||| | | ||||||
Sbjct 790 CTGGACGCAAATGGAGTG-TCCTACAAGGCAGAATTGGCAACGCAAGACTCGACAATGAG 848
Query 843 TGAGGTGATTTTGTCCGCGGGGGCCATTGGGAGCCCGCAATTGTTGATGCTGAGTGGCAT 902
||||||||| || || || || ||||| | |||||| ||| | |||||||| ||||| |
Sbjct 849 TGAGGTGATCTTATCAGCAGGTGCCATCGCGAGCCCTCAACTATTGATGCTAAGTGGTGT 908
Query 903 AGGTCCC-GCGGCTCATCTCACAGC-TCACGGGATTAAACC-GGTGGTCTTAGATCATCC 959
|| ||| ||||||||||| |||| | | | | | |||| ||| || ||||||| ||
Sbjct 909 GGG-CCCTGCGGCTCATCTTGCAGCCT-ATAG-AGTGAACCCGGTCATCGTAGATCAACC 965
Query 960 GATGGTAGGGC-AAGGGATGGGAGATAATCCGATGAATGCCA-TATTTATTCCGTCTCCT 1017
||||| |||| |||||||||| ||||| ||||||||| || | ||||| || ||||||
Sbjct 966 CATGGT-GGGCCAAGGGATGGGTGATAACCCGATGAAT-CCGGTTTTTATCCCTTCTCCT 1023
Query 1018 -ACGCCCGTCGAGGTTTCTCTAATACAAGTCGTTGGGATCACAAAGTTTGAAAGTTACAT 1076
| ||||| || || ||||| |||||| ||| || ||||| ||||||| ||||||||
Sbjct 1024 GAA-CCCGTAGAAGTGTCTCTTGTACAAGCCGTAGGAATCACCAAGTTTGGTAGTTACAT 1082
Query 1077 TGAAGGAGCAAGTGG-TGTCA-TCTTCTCTTAT-AGTTGGACTCGTAGATTTTTCGATGG 1133
|||||| | ||||| | | | ||| |||| || |||| ||| ||||| || ||||||||
Sbjct 1083 TGAAGGTGGAAGTGCCT-TAAGTCT-CTCT-ATTAGTTTGACCCGTAGCTTCTTCGATGG 1139
Query 1134 TGTTTTGAAT 1143
||||||||||
Sbjct 1140 TGTTTTGAAT 1149
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 98242466565
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5