BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg495302
Length=1662
Score E
Sequences producing significant alignments: (Bits) Value
AT5G52320.1 | Symbols: CYP96A4 | cytochrome P450, family 96, su... 2547 0.0
AT1G65340.1 | Symbols: CYP96A3 | cytochrome P450, family 96, su... 1567 0.0
> AT5G52320.1 | Symbols: CYP96A4 | cytochrome P450, family 96,
subfamily A, polypeptide 4 | chr5:21244978-21246682 REVERSE
LENGTH=1705
Length=1705
Score = 2547 bits (1379), Expect = 0.0
Identities = 1576/1670 (94%), Gaps = 18/1670 (1%)
Strand=Plus/Plus
Query 1 ACTCATACAAAAATCCATTATTTTTG-TTGA-CTaaaaaaaaCAACTCCTTTTTGTGTTG 58
||||||| ||||||||||| ||||| |||| | |||||||| || || |||||||| ||
Sbjct 1 ACTCATATGAAAATCCATTA-TTTTGTTTGACCAAAAAAAAAAAAATCATTTTTGTG-TG 58
Query 59 -AATAATGGCTTTGATCATAGGCTTACTTGAAATCTTCATAACCTTCATTTTCTTCCTTG 117
||||||||| |||||||||||||||||||||||||||| | |||||||||||| |||
Sbjct 59 CAATAATGGCGATGATCATAGGCTTACTTGAAATCTTCATCGCATTCATTTTCTTCTTTG 118
Query 118 CCTACCAGTGTTTCTCGCTCCACAAGAAAACTCCAAAGCATATGGTTACGAACTGGCCGG 177
||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct 119 TCTACCAGTGTTTCTCGCTCCACAAGAAAACTCCAAAGCATATGGTCATGAACTGGCCGG 178
Query 178 TCCTTGGGATGCTTCCGGGTGTGGTCCTCCACATCCCTCGTGTCTATGACTTGGTCACTG 237
||||||||||||||||||||||| || |||| ||||||||| |||| ||||| || || |
Sbjct 179 TCCTTGGGATGCTTCCGGGTGTGCTCTTCCAAATCCCTCGTATCTACGACTTTGTTACGG 238
Query 238 AGGCTCTTGAGGGAGAAAATATGACGGGTTGTTTCATAGGGCCATGGTTTAGTGGAACAG 297
|||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 239 AGGCTCTTGAGGCAGAAAATATGACGGGTTGTTTCATAGGGCCATGGCTTAGTGGAACAG 298
Query 298 ACATATTAATCACTGCTGACCCGGTGAATATCCAGTACATTCTAAGTTCAAACTTCGTTA 357
||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||| |
Sbjct 299 ACATATTGCTCACTGTTGACCCGGTGAATATCCAGTATATTCTAAGTTCAAACTTCGTGA 358
Query 358 ATTACCCTAAAGGGAAGAAGTTTAACAAGATCTTTGAATTCTTGGGAGATGGGATTTTCA 417
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 359 ATTACCCCAAAGGGAAGAAGTTTAACAAGATCTTTGAATTCTTGGGAGATGGGATTTTCA 418
Query 418 ACGTTGACTCGGGTTTGTGGGAGGATATGAGAATCTCGTCTCATGCGATTTTCAGCCATC 477
||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 419 ACGTTGACTCGGGCTTGTGGGAGGATATGAGAAACTCGTCTCATGCGATTTTCAGCCATC 478
Query 478 AAGATTTCCAAAGTTTTTCGGTGAGCACAAGCGTAAGCAAATTAAGGCAAGGGCTTGTTC 537
||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct 479 AAGATTTCCAAAGTTTTTCGGTGAGTACAAGCGTAAGCAAATTAAGTCAAGGGCTTGTTC 538
Query 538 CTATTCTTGATAACGCTGTTGAGAAACACATTCTTGTCGACTTGCAAGATGTGTTCCAGA 597
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 539 CTATTCTTGATAACGCTGTTGAGAAACACATTCTTGTCGACTTGCAAGATTTGTTCCAGA 598
Query 598 GATTCTTGTTTGACACATCTTCGACTTTGATGACTGGGTATGATCCAAAATCTCTCTCCA 657
|||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct 599 GATTCTTGTTTGACACATCTTCTACTTTGATGGCTGGGTATGATCCAAAATCTCTCTCCG 658
Query 658 TTGAAATGCCTAAGGTTGAGTTCGCTGATGCGATGGATGGAGTTGCAGATGCGATGTTCT 717
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 659 TTGAAATGCCTAAGGTTGAGTTCGCTGATGCGATGGATGGAGTTGCAGATGCCATGTTCT 718
Query 718 ATAGACATCTCAAGCCGGCTTTCCTGTGGGAG-CTCCAATCTTGGATCGGTGTAGGAGTA 776
||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||
Sbjct 719 ATAGACATCTCAAGCCGGCTTTCCTGT-GGAGTATCCAATCTTGGATCGGTGTAGGAATA 777
Query 777 GAGAAGAAGATGAGAAGAGGTCTCG-CGGTTTTCGATCAAATGCTAGGGAAGATCATATC 835
||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct 778 GAGAAGAAGATGAGAAGAGGTCTCGAC-GTTTTCGATCAAATGCTAGGGAAGATCATATC 836
Query 836 GGCTAAACGAGAGGAGATCAAAAGTCATGGGATTCATGACTCGAAAGGAGAGGAGGCCAT 895
|||||||||||||||||||||| |||||||||||||||||| ||| | || ||||||||
Sbjct 837 AGCTAAACGAGAGGAGATCAAAAATCATGGGATTCATGACTC-AAAAG-GA-GAGGCCAT 893
Query 896 GGACGTTTTAACATATTACATGACTATAGACACGACCAAATATAAACACTTGAAACCGAG 955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 894 GGACGTTTTAACATATTACATGACTATAGACACGACCAAATATAAACACTTGAAACCGAG 953
Query 956 TAACGATAAATTCATCAGAGACACTATTTTGGGTTTTTTGATAGCGGCAAGAGACACAAC 1015
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct 954 TAACGATAAATTCATCAGAGACACTATTTTGGGTCTTGTGATAGCGGCAAGAGACACAAC 1013
Query 1016 AAGATCAGCTCTCACTTGGTTATTCTGGCTTCTCTCTAAGAACCCTGAAGCAATGACCAA 1075
|| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1014 CAGCTCAGCTCTCACTTGGTTTTTCTGGCTTCTCTCTAAGAACCCTGAAGCAATGACCAA 1073
Query 1076 GATCCGACAAGAGATTAACAAGAAGATGCCAAAGTTTAATCCCGCAGATTTAGACAAGCT 1135
||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||
Sbjct 1074 GATCCGACAAGAGATTAACAAGAAGATGCCAAAGTTTGATCCGGCAGATTTAGACAAGCT 1133
Query 1136 CGTGTATCTAGATGGTGCCGTGTGTGAAACGCTAAGGCTATACCCATCAGTCCCATTTAA 1195
|||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 1134 CGTGTACCTAGACGGTGCCGTGTGTGAGACGCTAAGGCTATACCCATCAGTCCCATTCAA 1193
Query 1196 CCACAAGTCACCGGCAAAGCCAGATGTTCTTCCAAGTGGGCATAGAGTCGATGAGAATTG 1255
|||||||||||||||||||||||| || ||||||||||| |||| ||| ||| |||||||
Sbjct 1194 CCACAAGTCACCGGCAAAGCCAGACGTGCTTCCAAGTGGTCATAAAGTTGATAAGAATTG 1253
Query 1256 GAGGGTAGTAATCCCTATTT-TTGCAGTGGGGAGGATGAAATCTGTTTGGGGAGATGACG 1314
|||||||||||||||||||| || || | || ||||||||||||||||||||||||||||
Sbjct 1254 GAGGGTAGTAATCCCTATTTATT-CATTAGGCAGGATGAAATCTGTTTGGGGAGATGACG 1312
Query 1315 CAGAAGATTTTCGACCAGAGAGATGGATTTCAGACAGTGGAATGTTGAGACAAGAATCTT 1374
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1313 CAGAAGATTTTCGACCAGAGAGATGGATTTCAGACAGTGGAATGTTGAGACAAGAGTCTT 1372
Query 1375 CATATAAGTTTTTGGCATTTAACGCTGGTCCAAGAACTTGCTTGGGGAAAAGGTTAACAT 1434
|||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1373 CATATAAGTTTTTGGCGTTTAACGCTGGTCCAAGAACTTGCTTGGGGAAAAGATTAACAT 1432
Query 1435 TCTTGCAGGTGAAGACAGTAGCGGTCGAAATCATAAGAAACTATGACATTAAGGTCGTTG 1494
|||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1433 TCTTGCAGATGAAGACAGTAGCGGTCGAAATCATTAGAAACTATGACATTAAGGTCGTTG 1492
Query 1495 AAGGGCACAAACCCAAACCAGTTCCTTCCGTTCTTCTTCGCATGCAACATGGTCTCAAAG 1554
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1493 AAGGGCACAAACCAAAACCAGTTCCTTCCGTTCTTCTTCGCATGCAACATGGTCTCAAAG 1552
Query 1555 TTAGTGTCACTAAGATTTAGTGA-ACTTTTATTTTTGTTTTATGTTA-AATAAAATACTC 1612
||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||| ||
Sbjct 1553 TTAGTGTCACTAAGATTTAGTGATA-TTTTATTTTTGTTTTATGTTACAATAAAATATTC 1611
Query 1613 CAGTTGTGAAAGGAGATTAATGGGTAAAGATTAAGAACCTCATGATAATA 1662
|| ||||||||| | ||| ||||||||||||| |||||||||||||||||
Sbjct 1612 CA-TTGTGAAAGAATATTTATGGGTAAAGATTTAGAACCTCATGATAATA 1660
> AT1G65340.1 | Symbols: CYP96A3 | cytochrome P450, family 96,
subfamily A, polypeptide 3 | chr1:24268135-24269646 REVERSE
LENGTH=1512
Length=1512
Score = 1567 bits (848), Expect = 0.0
Identities = 1297/1515 (86%), Gaps = 26/1515 (2%)
Strand=Plus/Plus
Query 73 TCATAGGCTTACTTGAAATCTTCATAACCTTCATTTTCTTCCTTGCCTACCAGTGTTTCT 132
||||||| |||||||||||||||| | | || |||||||| || || ||| ||||| |
Sbjct 11 TCATAGGTTTACTTGAAATCTTCACAGCATTTGTTTTCTTCATTTTCTTCCAATGTTTAT 70
Query 133 CGCTCCACAAGAAAACTCCAAAGCATATGGTTACGAACTGGCCGGTCCTTGGGATGCTTC 192
||||||||||||||||| |||| | || | ||||||||||||| ||||||||||||||
Sbjct 71 TACTCCACAAGAAAACTCCCAAGCCTTTGCTCACGAACTGGCCGGCCCTTGGGATGCTTC 130
Query 193 CGGGTGTGGTCCTCCACA-TCCCTCGTGTCTATGACTTGG-TCACTGAGGCTCTTGAGGG 250
||||| | ||||||| | | |||||| |||| ||| ||| |||| |||| |||||| ||
Sbjct 131 CGGGTCTACTCCTCCA-AGTGCCTCGTATCTACGAC-TGGATCACCGAGGTTCTTGA-GG 187
Query 251 AGA-AAATATGACGGGTTGTTTCATAGGGCCATGGT-TTAGTGGAACAGACATATTAATC 308
|| | |||||||| |||||||| ||| |||| || |||| |||| ||||| || |
Sbjct 188 CGACAGATATGACGTTTTGTTTCAAAGGTCCAT-GTCTTAGCGGAATGGACATCTTGCTT 246
Query 309 ACTGCTGACCCGGTGAATATCCAGTACATTCTAAGTTCAAACTTCGTTAATTACCCTAAA 368
|||| ||| |||||||||||||| ||||||||||| ||||| || | ||| ||||| |||
Sbjct 247 ACTGTTGATCCGGTGAATATCCACTACATTCTAAGCTCAAATTTTGCTAACTACCCCAAA 306
Query 369 GGGAA-GAAGTTTAACAAGATCTTTGAATTCTTGGGAGATGGGATTTTCAACGTTGACTC 427
|||| | |||| || |||||||| ||| || |||| ||| |||||||||||||||||
Sbjct 307 -GGAATGGAGTTCAAGAAGATCTTCGAAGTCGTGGGTGATTCAATTTTCAACGTTGACTC 365
Query 428 GGGTTTGTGGGAGGATATGA-GAATCTCGTCTCATGCGATTTTCAGCCATCAAGATTTCC 486
|||||||||||||||||||| ||| |||||||||||| ||||| || ||||||||||||
Sbjct 366 GGGTTTGTGGGAGGATATGAGGAA-CTCGTCTCATGCCATTTTTAGTAATCAAGATTTCC 424
Query 487 AAAGT-TTTTCGGTGAGCACAAGCGTAAGCAAATTAAGGCAAGGGCTTGTTCCTATTCTT 545
||| | || | |||||| ||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 425 AAA-TGTTCTGGGTGAGTACAAGTGTAAGAAAATTAAGGCAAGGGCTTGTTCCTATTCTT 483
Query 546 GATAACGCTGTTGAGAAACACATTCTTGTCGACTTGCAAGATGTGTTCCAGAGATTCTTG 605
|| ||||| | ||| ||| | || |||||||||||||||||| |||||||||||||||||
Sbjct 484 GAAAACGCAGCTGATAAAAATATCCTTGTCGACTTGCAAGATTTGTTCCAGAGATTCTTG 543
Query 606 TTTGACACATCTTCGACTTTGATGACTGGGTATGATCCAAAATCTCTCTCCATTGAAATG 665
||||| ||||||| || ||||||||| |||||||||||||||| | | ||| ||||||||
Sbjct 544 TTTGATACATCTTTGATTTTGATGACCGGGTATGATCCAAAATGTTTATCCGTTGAAATG 603
Query 666 CCTAAGGTTGAGTTCGCTGATGCGATGGATGGAGTTGCAGATGCGATGTTCTATAGACAT 725
|||||||||||||||| ||| ||| | ||||| ||| | || | | | ||||||||||||
Sbjct 604 CCTAAGGTTGAGTTCGGTGACGCGGTCGATGGTGTTTCTGACGGGGTTTTCTATAGACAT 663
Query 726 CTCAAGCCGGCTTTCCTGTGGGA-GCTCCAATCTTGGATCGGTGTAGGAGTAGAGAAGAA 784
| ||||||| |||| ||| ||| |||||||| || ||| ||||||||||||||||| ||
Sbjct 664 GTTAAGCCGGTTTTCTTGT-GGAGGCTCCAATATTTGATTGGTGTAGGAGTAGAGAA-AA 721
Query 785 GA-TGAGAAGAGGTCTCGCGGTTTTCGATCAAATGCTAGGGAAGATCATATCGGCTAAAC 843
|| ||| ||||||||| ||||| ||||||||| | || | |||||||||| |||||||||
Sbjct 722 GATTGAAAAGAGGTCTAGCGGTATTCGATCAACTACTCGAGAAGATCATAACGGCTAAAC 781
Query 844 GAGAGGAGATCAAAAGTCATGGGATTCATGA-CTCGAAAGGA-GAGGAGGCCATGGACGT 901
||||||||||||| |||||||||| |||| | | | || || || |||||||| |||||
Sbjct 782 GAGAGGAGATCAATAGTCATGGGACTCATCATCCCTCAA-GAGGA-GAGGCCATAGACGT 839
Query 902 TTTAACATATTACATGACTATAGACACGACCAAATATAAACACTTGAAACCGAGTAACGA 961
|| ||||| ||||||||||| ||||||||||||||||| ||||| |||| ||| | ||
Sbjct 840 GTTGACATACTACATGACTATGGACACGACCAAATATAAGTACTTGGAACCAAGTGATGA 899
Query 962 TAAATTCATCAGAGACACTATTTTGGGTTTTTTGATAGCGGCAAGAGACACAACAAGATC 1021
|| |||||||| |||||||||||||||||| ||||||||||||||||| |||||||| ||
Sbjct 900 TAGATTCATCAAAGACACTATTTTGGGTTTCTTGATAGCGGCAAGAGATACAACAAGTTC 959
Query 1022 AGCTCTCACTTGGTTATTCTGGCTTCTCTCTAAGAACCCTGAAGCAATGACCAAGATCCG 1081
||| ||||||||||| ||||||||| | || ||||||||||| ||||| | |||||||||
Sbjct 960 AGCACTCACTTGGTTCTTCTGGCTTATGTCCAAGAACCCTGAGGCAATAAACAAGATCCG 1019
Query 1082 ACAAGAGATTAACAAGAAGATGCCAAAGTTTAATCCCGCAGATTTAGACAAGCTCGTGTA 1141
||||||| |||||||||||||||| | |||| |||||||||||||||| |||||||||||
Sbjct 1020 ACAAGAGGTTAACAAGAAGATGCCGAGGTTTGATCCCGCAGATTTAGAAAAGCTCGTGTA 1079
Query 1142 TCTAGATGGTGCCGTGTGTGAAACGCTAAGGCTATACCCATCAGTCCCATTTAACCACAA 1201
|||| | |||||||||||||| ||||||||| |||||||| |||| ||||||||||||||
Sbjct 1080 TCTACACGGTGCCGTGTGTGAGACGCTAAGGTTATACCCACCAGTTCCATTTAACCACAA 1139
Query 1202 GTCACCGGCAAAGCCAGATGTTCTTCCAAGTGGGCATAGAGTCGATGAGAATTGGAGGGT 1261
|||||||||||||||||| || |||||||||||||||||||| |||||||| |||| | |
Sbjct 1140 GTCACCGGCAAAGCCAGACGTACTTCCAAGTGGGCATAGAGTAGATGAGAAATGGAAGAT 1199
Query 1262 AGTAATCCCTATTTTTGCAGTGGGGAGGATGAAATCTGTTTGGGGAGATGACGCAGAAGA 1321
|| || |||| | |||| | ||||||||||||||||||||||||||||||||||||||
Sbjct 1200 TGTCATATCTATGTATGCATTAGGGAGGATGAAATCTGTTTGGGGAGATGACGCAGAAGA 1259
Query 1322 TTTTC-GACCAGAGAGATGGATTTCAGACAGTGGAATGTTGAGACAAGAATCTTCATATA 1380
||| | |||||||||||||||||||||||||||||| ||| | ||| ||| |||||||||
Sbjct 1260 TTT-CAGACCAGAGAGATGGATTTCAGACAGTGGAAGGTTAAAACATGAACCTTCATATA 1318
Query 1381 AGTTTTTGGCATTTAACGCTGGTCCAAGAACTTGCTTGGGGAAAAGGTTAACATTCTTGC 1440
|||| ||||| |||||||| ||||||||| ||||||||||||||| |||||| ||||| |
Sbjct 1319 AGTTCTTGGCGTTTAACGCCGGTCCAAGAGCTTGCTTGGGGAAAAAGTTAACGTTCTTAC 1378
Query 1441 AGGTGAAGACAGTAGCGGTCG-AAATCATAAGAAACTATGACATTAAGGTCGTTGAAGGG 1499
|| |||||||||| || | || |||||||| ||||||||||||| |||||||||||||||
Sbjct 1379 AGATGAAGACAGTGGCTG-CGGAAATCATACGAAACTATGACATCAAGGTCGTTGAAGGG 1437
Query 1500 CACAAACCCAAACCAGTTCCTTCCGTTCTTCTTCGCATGCAACATGGTCTCAAAGTTAGT 1559
|||||| || ||||||||||||| |||||| |||| |||||||||||||||||||||| |
Sbjct 1438 CACAAAACCGAACCAGTTCCTTCTGTTCTTTTTCGTATGCAACATGGTCTCAAAGTTAAT 1497
Query 1560 GTCACTAAGATTTAG 1574
|||||| ||| |||
Sbjct 1498 ATCACTAGGATCTAG 1512
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 82128091620
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5