BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg495325
Length=1551
Score E
Sequences producing significant alignments: (Bits) Value
AT5G52552.1 | Symbols: CPuORF14 | conserved peptide upstream op... 1700 0.0
AT5G52550.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 1700 0.0
AT4G25672.1 | Symbols: CPuORF12 | conserved peptide upstream op... 121 3e-26
AT4G25670.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 121 3e-26
> AT5G52552.1 | Symbols: CPuORF14 | conserved peptide upstream
open reading frame 14 | chr5:21327712-21330136 REVERSE LENGTH=1739
Length=1739
Score = 1700 bits (920), Expect = 0.0
Identities = 1182/1297 (91%), Gaps = 63/1297 (5%)
Strand=Plus/Plus
Query 301 AAGAAGAAGCAAGTTTTTACAAAAGCCAGGCAAACAAAGACTTTTAGCAATCATGGATAA 360
|||||||||| || || |||||||| |||||||||||||||| |||||||||||||||
Sbjct 405 AAGAAGAAGCCAG--TTAACAAAAGCAAGGCAAACAAAGACTTGTAGCAATCATGGATAG 462
Query 361 CAGTAGCTCGA--TG----C-AGC-C-G---ATTGTTAGAAAAGCCAGGAAGAAGAAAGT 408
||||||||||| || | ||| | | ||||||||||||||||||||||| |||||
Sbjct 463 CAGTAGCTCGATGTGCAAACAAGCTCAGCCAATTGTTAGAAAAGCCAGGAAGAAAAAAGT 522
Query 409 AAAACATGAAGTGGACCGAATCAAACAAGCTGAGAAGAAAAAGAGATGTCTTGAGAAAGC 468
|||| || |||||||| ||| |||||||||||||||||||| ||| |||||||||||||
Sbjct 523 AAAAGGTGTAGTGGACCCAATTAAACAAGCTGAGAAGAAAAATAGACGTCTTGAGAAAGC 582
Query 469 TATTGCTACTTCTGCAGCGATTCGGGCTGAGCTAGAGAAGAAGAAGCAAATGAAGAAGGA 528
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 583 TATTGCTACTTCTGCAGCAATTCGGGCTGAGCTAGAGAAGAAGAAGCAAATGAAGAAGGA 642
Query 529 AGGACAGCTAGACGCAGCAGTTGAAGAAGATTCAGCAGATGCTGCAAAGAATAAGCAGGA 588
|||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct 643 AGGACAGCTAGAGGCAGCAGATGAAGAAGATTCAGCAGATGCTGCAAAGAAGAAGCAGGA 702
Query 589 GAGAGACGAACTGGAGCGTAGCAAACAAGCAGAGAAGAAAAATAAAAATATTCGGCTGGA 648
|||||||||||||||||||| ||||||||| || || |||||||| | |||||||||
Sbjct 703 GAGAGACGAACTGGAGCGTATCAAACAAGC--AG-AG---AATAAAAAGAATCGGCTGGA 756
Query 649 GAAATCCATCGCTACTTCTGCAGCCATCATGGCTGAGCTAGAGAAGAAGAAGCTTAGAAA 708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 757 GAAATCCATCGCTACTTCTGCAGCCATCATGGCTGAGCTAGAGAAGAAGAAGCTTAGAAA 816
Query 709 ACTTGAGGAACAAAAGAGATTGGATGAGGAAGGTGCCGCCATTGCTGAGAAGAAAAAGAG 768
||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||
Sbjct 817 ACTTGAGGAACAAAAGAGATTGGCTGAGGAAGGTGCTGCCATTGCTGAGAAGAAAAAGAG 876
Query 769 ACGTCTTGAGAGAGCTATTGCTACTTCTGCAGCGATCCGCGCTGAGCTAGAGAAGAAGAA 828
||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 877 ACGTCTTGAGAAAGCTATTGCTACTACTGCAGCGATCCGCGCTGAGCTAGAGAAGAAGAA 936
Query 829 GCAAATGAAGAAGGAAGGACAGCTAGACGCAGCAGTTGAAGAAGATT---C--A----GC 879
||||||||||||||||||||||||||||||||||||||||||||||| | | ||
Sbjct 937 GCAAATGAAGAAGGAAGGACAGCTAGACGCAGCAGTTGAAGAAGATTCAGCATATGCTGC 996
Query 880 AAAGAATAAGCAGGAGAGAGACGAACTGGAGCGTATCAAACAAGCAGAGAGGAAAAAGAG 939
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 997 AAAGAAGAAGCAGGAGAGAGAGGAACTGGAGCGTATCAAACAAGCAGAGAGGAAAAAGAG 1056
Query 940 ACGTCTTGAGAAATCCATCGCTACTTCTGCTGCCATCAGGGCTGAGCTAGAGAAGAAGAA 999
|||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1057 ACGTATTGAGAAATCCATCGCTACTTCTGCAGCCATCAGGGCTGAGCTAGAGAAGAAGAA 1116
Query 1000 GCTTAGAAAACTTGAGGAACAAAGGAGATTGGATGAGGAAGGTGCCGCCATAGCAGAGGC 1059
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1117 GCTTAGAAAACTTGAGGAACAAAGGCGATTGGATGAGGAAGGTGCCGCCATAGCAGAGGC 1176
Query 1060 TGTTGCTCTGCACGTCTTACTTGGCGAAGATTGTGATGACTCATACCGAAACACGCTAAA 1119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1177 TGTTGCTCTGCACGTCTTACTTGGCGAAGATTGTGATGACTCATACCGAAACACGCTAAA 1236
Query 1120 CCAAGAAACAGGTTTCAAGCCATGGGACTCA-ACTACCAAATTCAATCTTTTTAGTGGTG 1178
||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||
Sbjct 1237 CCAAGAAACAGGTTTCAAGCCATGGGACT-ATACTACCAAAATCAATCTTTTTAGTGGTG 1295
Query 1179 GTAGAAACATATTTTTTCCTCACCAACGGTGCTCGAGCTATGCGGTTCTT-AGTAATAAC 1237
| | ||||| ||| |||||||||||||||||||| ||||| ||||||| | | ||| |||
Sbjct 1296 GAATAAACAGATTCTTTCCTCACCAACGGTGCTCAAGCTACGCGGTTCATGA-TAACAAC 1354
Query 1238 AGAACAAGAGAGAGTAACTGGTCGTCAGTCTCATATGAGCCTTTCCCAAGGGGATGGGAT 1297
||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1355 AGAACAAGAGACAGTAACTGGTCGTCAGTCTCATATGAGCCTTTCGCAAGGGGATGGGAT 1414
Query 1298 AATaacaacaacaacaacaacaTGAGAATATCAGCTGATTTGATTGCTGCTCAAGCTGTG 1357
|| |||||||||||||| || ||||||||||||||||| ||| | |||||||||||
Sbjct 1415 AA---CAACAACAACAACA---TGGGAATATCAGCTGATTTGTTTGATACTCAAGCTGTG 1468
Query 1358 TCGTCACTACAGATCTCTGAGAATACTGACGTTGACGCCATTGTCTTCAATGGGATGTTC 1417
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1469 TCGTCACTACAGATCTCTGAGAATACTGACGTTGACGCAATTGTCTTCAATGGGATGTTC 1528
Query 1418 AGAAGATGAC-A----A-------------GCATTTGTAACTTATTAAAAGTT-GTG--C 1456
|||||||||| | | ||||||||||||||||||||||| ||| |
Sbjct 1529 AGAAGATGACGACTGTATCATAATTCCCAAGCATTTGTAACTTATTAAAAGTTTGTGTGC 1588
Query 1457 TGTTTTT-ATTTTACATA-CCaaaaaaaCATTTTCGTCTCTTACACTGTGAAAATACTTT 1514
||||||| |||||||| | |||||| ||| |||||||||||||||||||| |||| |||
Sbjct 1589 TGTTTTTTATTTTACACAACCAAAACAACTTTTTCGTCTCTTACACTGTGCAAATCCTT- 1647
Query 1515 CATCTCTCTTTGGGTTTTTAGTGAAGTGAGACTCATA 1551
||||||||||| | |||||||||||||||||||||||
Sbjct 1648 CATCTCTCTTTAGCTTTTTAGTGAAGTGAGACTCATA 1684
Score = 455 bits (246), Expect = 6e-127
Identities = 297/321 (93%), Gaps = 6/321 (2%)
Strand=Plus/Plus
Query 437 GCTGAGAAGAAAAAGAGATGTCTTGAGAAAGCTATTGCTACTTCTGCAGCGATTCGGGCT 496
|||||||||||||||||| ||||||||||||||||||||||| |||||||||| || |||
Sbjct 860 GCTGAGAAGAAAAAGAGACGTCTTGAGAAAGCTATTGCTACTACTGCAGCGATCCGCGCT 919
Query 497 GAGCTAGAGAAGAAGAAGCAAATGAAGAAGGAAGGACAGCTAGACGCAGCAGTTGAAGAA 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 920 GAGCTAGAGAAGAAGAAGCAAATGAAGAAGGAAGGACAGCTAGACGCAGCAGTTGAAGAA 979
Query 557 GATTCAGCAGATGCTGCAAAGAATAAGCAGGAGAGAGACGAACTGGAGCGTAGCAAACAA 616
||||||||| ||||||||||||| |||||||||||||| ||||||||||||| |||||||
Sbjct 980 GATTCAGCATATGCTGCAAAGAAGAAGCAGGAGAGAGAGGAACTGGAGCGTATCAAACAA 1039
Query 617 GCAGAGAAGAAAAATAAAAATATTCGGCTGGAGAAATCCATCGCTACTTCTGCAGCCATC 676
||||||| |||||| | | |||| | |||||||||||||||||||||||||||||
Sbjct 1040 GCAGAGAGGAAAAAGAGACGTATT-G-----AGAAATCCATCGCTACTTCTGCAGCCATC 1093
Query 677 ATGGCTGAGCTAGAGAAGAAGAAGCTTAGAAAACTTGAGGAACAAAAGAGATTGGATGAG 736
| |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct 1094 AGGGCTGAGCTAGAGAAGAAGAAGCTTAGAAAACTTGAGGAACAAAGGCGATTGGATGAG 1153
Query 737 GAAGGTGCCGCCATTGCTGAG 757
|||||||||||||| || |||
Sbjct 1154 GAAGGTGCCGCCATAGCAGAG 1174
Score = 407 bits (220), Expect = 2e-112
Identities = 286/316 (91%), Gaps = 11/316 (3%)
Strand=Plus/Plus
Query 752 GCTGAGAAGAAAAAGAGACGTCTTGAGAGAGCTATTGCTACTTCTGCAGCGATCCGCGCT 811
|||||||||||||| ||||||||||||| ||||||||||||||||||||| || || |||
Sbjct 551 GCTGAGAAGAAAAATAGACGTCTTGAGAAAGCTATTGCTACTTCTGCAGCAATTCGGGCT 610
Query 812 GAGCTAGAGAAGAAGAAGCAAATGAAGAAGGAAGGACAGCTAGACGCAGCAGTTGAAGAA 871
|||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct 611 GAGCTAGAGAAGAAGAAGCAAATGAAGAAGGAAGGACAGCTAGAGGCAGCAGATGAAGAA 670
Query 872 GATT---C--A----GCAAAGAATAAGCAGGAGAGAGACGAACTGGAGCGTATCAAACAA 922
|||| | | |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 671 GATTCAGCAGATGCTGCAAAGAAGAAGCAGGAGAGAGACGAACTGGAGCGTATCAAACAA 730
Query 923 GCAGAGAGGAAAAAGAGA-CGTCTTGAGAAATCCATCGCTACTTCTGCTGCCATCAGGGC 981
||||||| ||||||| | || || ||||||||||||||||||||||| ||||||| |||
Sbjct 731 GCAGAGAATAAAAAGA-ATCGGCTGGAGAAATCCATCGCTACTTCTGCAGCCATCATGGC 789
Query 982 TGAGCTAGAGAAGAAGAAGCTTAGAAAACTTGAGGAACAAAGGAGATTGGATGAGGAAGG 1041
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct 790 TGAGCTAGAGAAGAAGAAGCTTAGAAAACTTGAGGAACAAAAGAGATTGGCTGAGGAAGG 849
Query 1042 TGCCGCCATAGCAGAG 1057
||| ||||| || |||
Sbjct 850 TGCTGCCATTGCTGAG 865
Score = 346 bits (187), Expect = 4e-94
Identities = 208/218 (95%), Gaps = 1/218 (0%)
Strand=Plus/Plus
Query 84 GTCGA-ATAGTCTGCTTCTATGCCATTTTGCCGAGAAAATGGGAGAAGTTAAGGGATGTT 142
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 136 GTCGAGGTAGTCTGCTTCTATGCCATTTTGCCGAGAAAATGGGAGAAGTTAAGGGATGTT 195
Query 143 GGAAATTAAGACCAATGCTTCCAAGGGATAAGTCTGCAAACTCCTACAACGTCTCCCTTC 202
|||||||| ||| ||||||| ||| |||||| ||||||||||||||||||||||||||||
Sbjct 196 GGAAATTAGGACGAATGCTTTCAAAGGATAACTCTGCAAACTCCTACAACGTCTCCCTTC 255
Query 203 TGTTATCTCCTGTTGTTTCTGTTTGGGATTGTATCGTCCGTAAAATGAGGTATACCTACA 262
| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 256 TCTTATCTCCTGTTGTTTCTGTTTGGGATTGTATTGTCCGTAAAATGAGGTATACCTACA 315
Query 263 TACCTGAGTGGGTGTAGTAGTCAATGAGATCATCGCGC 300
||||||||||||||||||||||| ||||||||||||||
Sbjct 316 TACCTGAGTGGGTGTAGTAGTCATTGAGATCATCGCGC 353
> AT5G52550.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT4G25670.2);
Has 30201 Blast hits to 17322 proteins in 780 species: Archae
- 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants
- 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink). | chr5:21327712-21330136 REVERSE LENGTH=1739
Length=1739
Score = 1700 bits (920), Expect = 0.0
Identities = 1182/1297 (91%), Gaps = 63/1297 (5%)
Strand=Plus/Plus
Query 301 AAGAAGAAGCAAGTTTTTACAAAAGCCAGGCAAACAAAGACTTTTAGCAATCATGGATAA 360
|||||||||| || || |||||||| |||||||||||||||| |||||||||||||||
Sbjct 405 AAGAAGAAGCCAG--TTAACAAAAGCAAGGCAAACAAAGACTTGTAGCAATCATGGATAG 462
Query 361 CAGTAGCTCGA--TG----C-AGC-C-G---ATTGTTAGAAAAGCCAGGAAGAAGAAAGT 408
||||||||||| || | ||| | | ||||||||||||||||||||||| |||||
Sbjct 463 CAGTAGCTCGATGTGCAAACAAGCTCAGCCAATTGTTAGAAAAGCCAGGAAGAAAAAAGT 522
Query 409 AAAACATGAAGTGGACCGAATCAAACAAGCTGAGAAGAAAAAGAGATGTCTTGAGAAAGC 468
|||| || |||||||| ||| |||||||||||||||||||| ||| |||||||||||||
Sbjct 523 AAAAGGTGTAGTGGACCCAATTAAACAAGCTGAGAAGAAAAATAGACGTCTTGAGAAAGC 582
Query 469 TATTGCTACTTCTGCAGCGATTCGGGCTGAGCTAGAGAAGAAGAAGCAAATGAAGAAGGA 528
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 583 TATTGCTACTTCTGCAGCAATTCGGGCTGAGCTAGAGAAGAAGAAGCAAATGAAGAAGGA 642
Query 529 AGGACAGCTAGACGCAGCAGTTGAAGAAGATTCAGCAGATGCTGCAAAGAATAAGCAGGA 588
|||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct 643 AGGACAGCTAGAGGCAGCAGATGAAGAAGATTCAGCAGATGCTGCAAAGAAGAAGCAGGA 702
Query 589 GAGAGACGAACTGGAGCGTAGCAAACAAGCAGAGAAGAAAAATAAAAATATTCGGCTGGA 648
|||||||||||||||||||| ||||||||| || || |||||||| | |||||||||
Sbjct 703 GAGAGACGAACTGGAGCGTATCAAACAAGC--AG-AG---AATAAAAAGAATCGGCTGGA 756
Query 649 GAAATCCATCGCTACTTCTGCAGCCATCATGGCTGAGCTAGAGAAGAAGAAGCTTAGAAA 708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 757 GAAATCCATCGCTACTTCTGCAGCCATCATGGCTGAGCTAGAGAAGAAGAAGCTTAGAAA 816
Query 709 ACTTGAGGAACAAAAGAGATTGGATGAGGAAGGTGCCGCCATTGCTGAGAAGAAAAAGAG 768
||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||
Sbjct 817 ACTTGAGGAACAAAAGAGATTGGCTGAGGAAGGTGCTGCCATTGCTGAGAAGAAAAAGAG 876
Query 769 ACGTCTTGAGAGAGCTATTGCTACTTCTGCAGCGATCCGCGCTGAGCTAGAGAAGAAGAA 828
||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 877 ACGTCTTGAGAAAGCTATTGCTACTACTGCAGCGATCCGCGCTGAGCTAGAGAAGAAGAA 936
Query 829 GCAAATGAAGAAGGAAGGACAGCTAGACGCAGCAGTTGAAGAAGATT---C--A----GC 879
||||||||||||||||||||||||||||||||||||||||||||||| | | ||
Sbjct 937 GCAAATGAAGAAGGAAGGACAGCTAGACGCAGCAGTTGAAGAAGATTCAGCATATGCTGC 996
Query 880 AAAGAATAAGCAGGAGAGAGACGAACTGGAGCGTATCAAACAAGCAGAGAGGAAAAAGAG 939
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 997 AAAGAAGAAGCAGGAGAGAGAGGAACTGGAGCGTATCAAACAAGCAGAGAGGAAAAAGAG 1056
Query 940 ACGTCTTGAGAAATCCATCGCTACTTCTGCTGCCATCAGGGCTGAGCTAGAGAAGAAGAA 999
|||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1057 ACGTATTGAGAAATCCATCGCTACTTCTGCAGCCATCAGGGCTGAGCTAGAGAAGAAGAA 1116
Query 1000 GCTTAGAAAACTTGAGGAACAAAGGAGATTGGATGAGGAAGGTGCCGCCATAGCAGAGGC 1059
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1117 GCTTAGAAAACTTGAGGAACAAAGGCGATTGGATGAGGAAGGTGCCGCCATAGCAGAGGC 1176
Query 1060 TGTTGCTCTGCACGTCTTACTTGGCGAAGATTGTGATGACTCATACCGAAACACGCTAAA 1119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1177 TGTTGCTCTGCACGTCTTACTTGGCGAAGATTGTGATGACTCATACCGAAACACGCTAAA 1236
Query 1120 CCAAGAAACAGGTTTCAAGCCATGGGACTCA-ACTACCAAATTCAATCTTTTTAGTGGTG 1178
||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||
Sbjct 1237 CCAAGAAACAGGTTTCAAGCCATGGGACT-ATACTACCAAAATCAATCTTTTTAGTGGTG 1295
Query 1179 GTAGAAACATATTTTTTCCTCACCAACGGTGCTCGAGCTATGCGGTTCTT-AGTAATAAC 1237
| | ||||| ||| |||||||||||||||||||| ||||| ||||||| | | ||| |||
Sbjct 1296 GAATAAACAGATTCTTTCCTCACCAACGGTGCTCAAGCTACGCGGTTCATGA-TAACAAC 1354
Query 1238 AGAACAAGAGAGAGTAACTGGTCGTCAGTCTCATATGAGCCTTTCCCAAGGGGATGGGAT 1297
||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1355 AGAACAAGAGACAGTAACTGGTCGTCAGTCTCATATGAGCCTTTCGCAAGGGGATGGGAT 1414
Query 1298 AATaacaacaacaacaacaacaTGAGAATATCAGCTGATTTGATTGCTGCTCAAGCTGTG 1357
|| |||||||||||||| || ||||||||||||||||| ||| | |||||||||||
Sbjct 1415 AA---CAACAACAACAACA---TGGGAATATCAGCTGATTTGTTTGATACTCAAGCTGTG 1468
Query 1358 TCGTCACTACAGATCTCTGAGAATACTGACGTTGACGCCATTGTCTTCAATGGGATGTTC 1417
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1469 TCGTCACTACAGATCTCTGAGAATACTGACGTTGACGCAATTGTCTTCAATGGGATGTTC 1528
Query 1418 AGAAGATGAC-A----A-------------GCATTTGTAACTTATTAAAAGTT-GTG--C 1456
|||||||||| | | ||||||||||||||||||||||| ||| |
Sbjct 1529 AGAAGATGACGACTGTATCATAATTCCCAAGCATTTGTAACTTATTAAAAGTTTGTGTGC 1588
Query 1457 TGTTTTT-ATTTTACATA-CCaaaaaaaCATTTTCGTCTCTTACACTGTGAAAATACTTT 1514
||||||| |||||||| | |||||| ||| |||||||||||||||||||| |||| |||
Sbjct 1589 TGTTTTTTATTTTACACAACCAAAACAACTTTTTCGTCTCTTACACTGTGCAAATCCTT- 1647
Query 1515 CATCTCTCTTTGGGTTTTTAGTGAAGTGAGACTCATA 1551
||||||||||| | |||||||||||||||||||||||
Sbjct 1648 CATCTCTCTTTAGCTTTTTAGTGAAGTGAGACTCATA 1684
Score = 455 bits (246), Expect = 6e-127
Identities = 297/321 (93%), Gaps = 6/321 (2%)
Strand=Plus/Plus
Query 437 GCTGAGAAGAAAAAGAGATGTCTTGAGAAAGCTATTGCTACTTCTGCAGCGATTCGGGCT 496
|||||||||||||||||| ||||||||||||||||||||||| |||||||||| || |||
Sbjct 860 GCTGAGAAGAAAAAGAGACGTCTTGAGAAAGCTATTGCTACTACTGCAGCGATCCGCGCT 919
Query 497 GAGCTAGAGAAGAAGAAGCAAATGAAGAAGGAAGGACAGCTAGACGCAGCAGTTGAAGAA 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 920 GAGCTAGAGAAGAAGAAGCAAATGAAGAAGGAAGGACAGCTAGACGCAGCAGTTGAAGAA 979
Query 557 GATTCAGCAGATGCTGCAAAGAATAAGCAGGAGAGAGACGAACTGGAGCGTAGCAAACAA 616
||||||||| ||||||||||||| |||||||||||||| ||||||||||||| |||||||
Sbjct 980 GATTCAGCATATGCTGCAAAGAAGAAGCAGGAGAGAGAGGAACTGGAGCGTATCAAACAA 1039
Query 617 GCAGAGAAGAAAAATAAAAATATTCGGCTGGAGAAATCCATCGCTACTTCTGCAGCCATC 676
||||||| |||||| | | |||| | |||||||||||||||||||||||||||||
Sbjct 1040 GCAGAGAGGAAAAAGAGACGTATT-G-----AGAAATCCATCGCTACTTCTGCAGCCATC 1093
Query 677 ATGGCTGAGCTAGAGAAGAAGAAGCTTAGAAAACTTGAGGAACAAAAGAGATTGGATGAG 736
| |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct 1094 AGGGCTGAGCTAGAGAAGAAGAAGCTTAGAAAACTTGAGGAACAAAGGCGATTGGATGAG 1153
Query 737 GAAGGTGCCGCCATTGCTGAG 757
|||||||||||||| || |||
Sbjct 1154 GAAGGTGCCGCCATAGCAGAG 1174
Score = 407 bits (220), Expect = 2e-112
Identities = 286/316 (91%), Gaps = 11/316 (3%)
Strand=Plus/Plus
Query 752 GCTGAGAAGAAAAAGAGACGTCTTGAGAGAGCTATTGCTACTTCTGCAGCGATCCGCGCT 811
|||||||||||||| ||||||||||||| ||||||||||||||||||||| || || |||
Sbjct 551 GCTGAGAAGAAAAATAGACGTCTTGAGAAAGCTATTGCTACTTCTGCAGCAATTCGGGCT 610
Query 812 GAGCTAGAGAAGAAGAAGCAAATGAAGAAGGAAGGACAGCTAGACGCAGCAGTTGAAGAA 871
|||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct 611 GAGCTAGAGAAGAAGAAGCAAATGAAGAAGGAAGGACAGCTAGAGGCAGCAGATGAAGAA 670
Query 872 GATT---C--A----GCAAAGAATAAGCAGGAGAGAGACGAACTGGAGCGTATCAAACAA 922
|||| | | |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 671 GATTCAGCAGATGCTGCAAAGAAGAAGCAGGAGAGAGACGAACTGGAGCGTATCAAACAA 730
Query 923 GCAGAGAGGAAAAAGAGA-CGTCTTGAGAAATCCATCGCTACTTCTGCTGCCATCAGGGC 981
||||||| ||||||| | || || ||||||||||||||||||||||| ||||||| |||
Sbjct 731 GCAGAGAATAAAAAGA-ATCGGCTGGAGAAATCCATCGCTACTTCTGCAGCCATCATGGC 789
Query 982 TGAGCTAGAGAAGAAGAAGCTTAGAAAACTTGAGGAACAAAGGAGATTGGATGAGGAAGG 1041
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct 790 TGAGCTAGAGAAGAAGAAGCTTAGAAAACTTGAGGAACAAAAGAGATTGGCTGAGGAAGG 849
Query 1042 TGCCGCCATAGCAGAG 1057
||| ||||| || |||
Sbjct 850 TGCTGCCATTGCTGAG 865
Score = 346 bits (187), Expect = 4e-94
Identities = 208/218 (95%), Gaps = 1/218 (0%)
Strand=Plus/Plus
Query 84 GTCGA-ATAGTCTGCTTCTATGCCATTTTGCCGAGAAAATGGGAGAAGTTAAGGGATGTT 142
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 136 GTCGAGGTAGTCTGCTTCTATGCCATTTTGCCGAGAAAATGGGAGAAGTTAAGGGATGTT 195
Query 143 GGAAATTAAGACCAATGCTTCCAAGGGATAAGTCTGCAAACTCCTACAACGTCTCCCTTC 202
|||||||| ||| ||||||| ||| |||||| ||||||||||||||||||||||||||||
Sbjct 196 GGAAATTAGGACGAATGCTTTCAAAGGATAACTCTGCAAACTCCTACAACGTCTCCCTTC 255
Query 203 TGTTATCTCCTGTTGTTTCTGTTTGGGATTGTATCGTCCGTAAAATGAGGTATACCTACA 262
| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 256 TCTTATCTCCTGTTGTTTCTGTTTGGGATTGTATTGTCCGTAAAATGAGGTATACCTACA 315
Query 263 TACCTGAGTGGGTGTAGTAGTCAATGAGATCATCGCGC 300
||||||||||||||||||||||| ||||||||||||||
Sbjct 316 TACCTGAGTGGGTGTAGTAGTCATTGAGATCATCGCGC 353
> AT4G25672.1 | Symbols: CPuORF12 | conserved peptide upstream
open reading frame 12 | chr4:13085218-13087090 REVERSE LENGTH=1213
Length=1213
Score = 121 bits (65), Expect = 3e-26
Identities = 100/117 (85%), Gaps = 2/117 (2%)
Strand=Plus/Plus
Query 1313 aacaacaTGAGAATATCAGCTGATTTGATTGCTGCTCAAGCTGTGTCGTCACTACAGATC 1372
||||||||| |||||||||||||||||||||||||||| ||||| ||| | ||||||||
Sbjct 887 AACAACATGGGAATATCAGCTGATTTGATTGCTGCTCAGGCTGTCTCGGCGCTACAGATA 946
Query 1373 TCTGAGAATACTGACGTTGA-CGCCATTGTCTTCAATGGGATGTTCAGAAGATGACA 1428
||||| ||| |||| | || |||| |||| ||||||||||||||| | |||||||
Sbjct 947 TCTGAAAATGCTGATGG-GAACGCCTTTGTGTTCAATGGGATGTTCCGGGGATGACA 1002
> AT4G25670.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT4G25690.2);
Has 30201 Blast hits to 17322 proteins in 780 species: Archae
- 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants
- 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink). | chr4:13085218-13087090 REVERSE LENGTH=1213
Length=1213
Score = 121 bits (65), Expect = 3e-26
Identities = 100/117 (85%), Gaps = 2/117 (2%)
Strand=Plus/Plus
Query 1313 aacaacaTGAGAATATCAGCTGATTTGATTGCTGCTCAAGCTGTGTCGTCACTACAGATC 1372
||||||||| |||||||||||||||||||||||||||| ||||| ||| | ||||||||
Sbjct 887 AACAACATGGGAATATCAGCTGATTTGATTGCTGCTCAGGCTGTCTCGGCGCTACAGATA 946
Query 1373 TCTGAGAATACTGACGTTGA-CGCCATTGTCTTCAATGGGATGTTCAGAAGATGACA 1428
||||| ||| |||| | || |||| |||| ||||||||||||||| | |||||||
Sbjct 947 TCTGAAAATGCTGATGG-GAACGCCTTTGTGTTCAATGGGATGTTCCGGGGATGACA 1002
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 76555831125
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5