BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg495376
Length=1265
Score E
Sequences producing significant alignments: (Bits) Value
AT5G53090.1 | Symbols: | NAD(P)-binding Rossmann-fold superfam... 1855 0.0
AT5G53100.1 | Symbols: | NAD(P)-binding Rossmann-fold superfam... 826 0.0
> AT5G53090.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr5:21523379-21525697 FORWARD LENGTH=1309
Length=1309
Score = 1855 bits (1004), Expect = 0.0
Identities = 1173/1254 (94%), Gaps = 13/1254 (1%)
Strand=Plus/Plus
Query 1 TCTCTCATCAATCATCTCaagaaggaagaagaagatgagcagtgaaacattgtcgttgac 60
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct 12 TCTCTCATCAATCATCTCAAGAAGGAAGAAGAAGATGAGCAGTGAAACGTCGTCGTTGAC 71
Query 61 ---------gaagaagaagaaggaagCTTTGGGATGGATAGAGTTGATCAGAGGATGGGG 111
||||||||||||||||| ||||||||||||||||| || | ||||||| |
Sbjct 72 GAAGAAGATGAAGAAGAAGAAGGAAGGTTTGGGATGGATAGAGTCAATTAAAGGATGGAG 131
Query 112 TTGTGTTTTCCACGAGTTTCTCTTCCAAAGATTCATGGCGTCTCATTTACAAAATCCACT 171
|||||| |||||||||||||||||||| ||||||||||| |||||| |||| ||||||||
Sbjct 132 TTGTGTGTTCCACGAGTTTCTCTTCCAGAGATTCATGGCTTCTCATCTACAGAATCCACT 191
Query 172 TCCTCTTCCTTCTCTGAATCACCTCACCTGCATTGTCACTGGCTCCACTAGCGGCATTGG 231
|||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 192 TCCTCTACCTTCACTGAATCACCTCACCTGCATTGTCACTGGCTCCACTAGTGGCATTGG 251
Query 232 TCGCGAAACAGCTAGGCAGCTTGCAGTAGCTGGTGCTCATGTTGTAATGGCTGTGAGGAA 291
||||||||| |||||||||||||||| ||||||||||| |||||| ||||| ||||||||
Sbjct 252 TCGCGAAACCGCTAGGCAGCTTGCAGAAGCTGGTGCTCGTGTTGTTATGGCGGTGAGGAA 311
Query 292 TACAAAAGCAGCTCATGAGCTGATTCAACAATGGCAGAAGGACTGGTCTGGTAAAGGCAT 351
||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct 312 TACTAAAGCAGCTCATGAGCTGATTCAGCAATGGCAGAAGGAGTGGTCTGGTAAAGGCAT 371
Query 352 TCCTCTTAATCTTGAGGCTATGGAACTTGATCTTCTCTCTCTGGGTTCCGTCGTCGAATT 411
||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||| |||
Sbjct 372 CCCTCTTAATCTCGAGGCTATGGAACTTGATCTTCTCTCTCTGGATTCTGTCGTCGGATT 431
Query 412 TTGCAATGTGTGGAACGCGCGATTATCCCCTTTGCATGTTCTGATCAACAATGCCGGCAT 471
||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 432 TTGCAATCTGTGGAACGCGCGATTATCCCCTTTGCATGTTCTGATTAACAATGCCGGCAT 491
Query 472 ATTTTCCATGGGAGAGGAACAGAAGTTCTCAAAGGATGAATATGAGCAGCACATGCAAGT 531
|||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct 492 ATTTTCCATGGGAGAGGAACAGAAGTTCTCAAAGGATGGATATGAGCAACACATGCAAGT 551
Query 532 GAACCATTTAGCTCCAGCGCTGCTTTCACTACTCCTTTTGCCCTCGCTTATCCGAGGCAC 591
|||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |
Sbjct 552 GAACCATTTAGCTCCAGCTCTGCTTTCACTACTCCTTTTGCCCTCACTTATCCGAGGCTC 611
Query 592 CCCAAGCCGGATCATTAATGTGAACTCTGTTATGCACTATGTTGGTTTCGTTGACCCGGA 651
||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 612 CCCAAGCAGGATCATTAATGTGAATTCTGTTATGCACTATGTTGGTTTCGTTGACCCGGA 671
Query 652 TGATATGAATGTTGTTTCTGGGAAACGAAAGTTTACAAGCCTCGTTGGATATTCTGGCAG 711
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 672 TGACATGAATGTTGTTTCTGGGAAACGAAAGTTTACAAGCCTCGTTGGATATTCTGGCAG 731
Query 712 CAAGCTTGCACAGGTTATGTTTAGCAATGTTCTCTTGAAAAGGCTGCCACTAGAAACTCG 771
|||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||
Sbjct 732 CAAGCTTGCACAGGTTATGTTTAGCAATGTACTTTTGAAAAGGCTGCCTCTAGAAACTCG 791
Query 772 CATTAGTGTTGTTTGTTTATCCCCCGGGATTGTCCTAACAAATGTTGCGAGGGATCTACC 831
|||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 792 CATTAGCGTTGTTTGTTTATCCCCCGGGATTGTCCTAACAAATGTTGCGAGAGATCTGCC 851
Query 832 AAGATATGTTCAAGTTCAATACGCGTTGATACCTTATTTCATCTTTTCGCCTCAAGAAGG 891
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 852 GAGATATGTTCAAGTTCAATACGCGTTGATACCTTATTTCATCTTTTCGCCTCAAGAAGG 911
Query 892 TTGTAGAAGCACACTTTTCTCAGCGACAGACTCTCAGATTCCAAAGCATTGTGAAAAGCT 951
| ||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||
Sbjct 912 CTCTAGAAGCACACTTTTCTCAGCTACAGACGCTCAGATTCCAGAGCATTGTGAAAAGCT 971
Query 952 AAAAACCGGCGATAAGCCCATTTGTACATTCATATCTCAAGATTGCAAGCACACAAAGCC 1011
|||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct 972 AAAAACCGAAGATAAGCCCGTTTGTACATTCATATCTCAAAATTGCAAGCACACAAAGCC 1031
Query 1012 TTCAGAAGAAGCACACAACGTAGAAACAGC-GAACAGAGTTTGGGAAAAGACGATAGAGA 1070
|||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| ||
Sbjct 1032 TTCAGAAGAAGCACACAACGTAGAAACAGCAGAA-AGAGTATGGGAAAAGACGATAAAGC 1090
Query 1071 TGATCGGTCTTCCTCTTGATGCACTGGAGAGGCTTATAGAAGGAGAAGAGGTCCAATGTC 1130
|||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |
Sbjct 1091 TGATCGGTCTTCCTCTTGATGCTGTAGAGAGGCTTATAGAAGGAGAAGAGGTCCAATGCC 1150
Query 1131 GGTATGGGACTCATCAACAATAAAGTCTTT-T-ACAAGTCTCTCTCTTCTTTCCTCCAAT 1188
|||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||
Sbjct 1151 GGTATGGGACTCATCAACAATAAAGTCTTTCTCACAAGTCTCTATCTTCTTTCCTCCAAT 1210
Query 1189 TTGTACTTGCTAGAAGATTCTAGAATTTGACCTTAAAGCTGCATTACACTACAC 1242
||||||||| |||| | |||||||| ||||||| ||||||||||||||||||||
Sbjct 1211 TTGTACTTGTTAGATGTTTCTAGAACTTGACCTCAAAGCTGCATTACACTACAC 1264
> AT5G53100.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr5:21526250-21528323 FORWARD LENGTH=1095
Length=1095
Score = 826 bits (447), Expect = 0.0
Identities = 897/1109 (81%), Gaps = 51/1109 (5%)
Strand=Plus/Plus
Query 64 gaagaagaaggaagCTTT-GGGATGGATAGAGTTGATCAGAGGATGGGGTT-GTGTTTTC 121
||||||||| || | ||| ||| ||||| ||| ||| ||||||| || || |||| |
Sbjct 3 GAAGAAGAATGATGGTTTAGGG-TGGATTCAGTGGATGAGAGGAT-GGTTTAATGTTGTG 60
Query 122 CACGAGTTTCTCTTCCAAAGATTCATGGCGTCTCATTTACAAAATCCACTTCCTCTTCCT 181
|| ||| |||| || || ||| | ||||| ||||| ||||||| |||| ||| |||||||
Sbjct 61 CAAGAGATTCTTTTGCAGAGAATAATGGCTTCTCACTTACAAATTCCATTTCATCTTCCT 120
Query 182 TCTCTGAATCACCTCACCTGCATTGTCACTGGCTCCACTAGCGGCATTGG-TCGCGAAAC 240
|| | || ||| | || || |||||||||||||| ||||| |||||||| || ||| ||
Sbjct 121 CCTTTAAACCACTTAACTTGTATTGTCACTGGCTCAACTAGTGGCATTGGCTC-CGAGAC 179
Query 241 AGCTAGGCAGCTTGCAGTA-GCTGGTGCTCATGTTGTAATGGCTGTGAGGAATACAAAAG 299
|||||||| ||||||| | ||||||||||||||||| ||||| || ||||| | |||||
Sbjct 180 CGCTAGGCAACTTGCAG-AGGCTGGTGCTCATGTTGTTATGGCGGTTAGGAACATAAAAG 238
Query 300 CAGCTCATGAGCTGATTCAACAATGGCAG---AA--GGACTGGT-CTGGTAAAGGCA-TT 352
||||||||||||||||||||||||||||| || || ||| | |||| ||| | |
Sbjct 239 CAGCTCATGAGCTGATTCAACAATGGCAGACCAAGTGGTCTGCTAGTGGT-GAGGGACTC 297
Query 353 CCTCTTAATCTTGAGGCTATGGAACTTGATCTTCTCTCTCTGGGTTCCGTCGTCGA-ATT 411
|| |||||| || |||| ||||||||||| ||||||||| | | |||||||||| | |||
Sbjct 298 CCACTTAATATTCAGGCAATGGAACTTGACCTTCTCTCTTTAGATTCCGTCGTC-AGATT 356
Query 412 TTGCAATGTGTGGAACGCGCGATTATCCCCTTTGCATGTTCTGATCAACAATGCCGGCAT 471
| |||||| |||||| || || || ||||||||||||||||||| || |||||||||||
Sbjct 357 TAGCAATGCGTGGAATGCACGGCTAGCCCCTTTGCATGTTCTGATTAATAATGCCGGCAT 416
Query 472 ATTTTCCATGGGAGAGGAACAGAAGTTCTCA-AAGGATGAATATGAGCAGCACATGCAAG 530
||| | ||||||| || ||| || |||||| || |||| |||||| |||||||||||||
Sbjct 417 GTTTGCTATGGGAGGGGCACAAAAATTCTCAGAA-GATGGATATGAACAGCACATGCAAG 475
Query 531 TGAACCATTTAGCTCCAGCGCTGCTTTCACTACTCCTTTTGCCCTCGCTTATCCGAGGCA 590
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |
Sbjct 476 TGAACCATTTAGCTCCAGCTCTGCTTTCACTACTCCTTTTGCCTTCGCTTATCCGAG-CT 534
Query 591 CCCCA-AGCCGGATCATTAATGTGAACTCTGTTATGCACTATGTTGGTTTCGTTGACCCG 649
||| || || ||||||||||| || ||||||||||| ||||||||||| ||||| ||
Sbjct 535 TCCCGGAGTCGAATCATTAATGTTAATTCTGTTATGCATTATGTTGGTTTTGTTGATCCA 594
Query 650 GATGATATGAATGTTGTTTCTGGGAAACGAAAGTTTACAAGCCTCGTTG-G-ATATTCTG 707
||||||||||| |||||||||| |||||||||||| ||||| | | | | |||||||
Sbjct 595 AATGATATGAATTTTGTTTCTGGTAAACGAAAGTTTTCAAGCTT-GA-GCGCATATTCTA 652
Query 708 GCAGCAAGCTTGCACAGGTTATGTTTAGCAATGTTCTCTTGAAAAGGCTGCCACTAGAAA 767
||||||| || || ||||||||||||| ||||||||| || |||| ||||| | ||||
Sbjct 653 GCAGCAAACTCGCTCAGGTTATGTTTAACAATGTTCTTTTAAAAAAACTGCCTTTGGAAA 712
Query 768 CTCG-CATTAGTGTTGTTTGTTTATCCCCCGG-GATTGTCCTAACAAATGTTGCGAGGGA 825
| || |||||| || ||||||||||| || || | |||||| ||| || || | || ||
Sbjct 713 C-CGGCATTAGCGTCGTTTGTTTATCTCCTGGTG-TTGTCCAAACTAACATTACAAGAGA 770
Query 826 TCTACCAAGATATGTTC-AAGTTCAATACGC-G--TTGATACCTTATTTCATCTTTTCGC 881
||| ||||||| || || ||| || ||| | | ||| ||||||||||||||||| |
Sbjct 771 TCTTCCAAGAT-TGGTCCAAGATCTTTACTCAGCCTTG---CCTTATTTCATCTTTTCAC 826
Query 882 CTCAAGAAGGTTGTAGAAGCACACTTTTCTCAGCGACAGACTC-TCAGATTCCAAAGCAT 940
| |||||||||||||||||| | |||||||| |||||||| || |||||||||||| |||
Sbjct 827 CACAAGAAGGTTGTAGAAGCTCGCTTTTCTCGGCGACAGA-TCCTCAGATTCCAAACCAT 885
Query 941 TGTGAAAAGCTAAAAACCGGCGATAAGCCCATTTGTACATT---CATATCTC-AAGATTG 996
| |||||||||||||| || || | |||| ||||| |||||||| || ||||
Sbjct 886 TACCAAAAGCTAAAAACCAATGAGAAATCTGTTTGCACATTATTCATATCTCTAA-ATTG 944
Query 997 CAAGCACACAAAGCCTTCAGAAGAAGCACACAACGTAGAAACAGCGAACAGAGTTTGGGA 1056
||| | ||| || ||| |||||||| || ||||| |||||||| ||||||||||||||
Sbjct 945 CAAACTCACGAATTGTTCTGAAGAAGCTCAAAACGTTGAAACAGCTAACAGAGTTTGGGA 1004
Query 1057 AAAGACGAT-AGAGATGATCGGTCTTCCT-CTTGATGCACTGGAGAGGCTTATAGAAGGA 1114
|||||| || |||| |||||||||||||| || ||| || |||| |||||| | || |||
Sbjct 1005 AAAGAC-ATTAGAGTTGATCGGTCTTCCTTCT-GATACAGTGGAAAGGCTTGTGGAGGGA 1062
Query 1115 GAAGAGGTCCAA-TGTCGGTATGGGACTC 1142
|||| |||| || ||||| ||| | ||||
Sbjct 1063 GAAGTGGTC-AAGTGTCGTTATCGAACTC 1090
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 62198475255
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5