BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg495521
Length=1071
Score E
Sequences producing significant alignments: (Bits) Value
AT5G54330.1 | Symbols: | Protein of unknown function (DUF295) ... 1901 0.0
AT5G55890.1 | Symbols: | Protein of unknown function (DUF295) ... 767 0.0
AT5G55880.1 | Symbols: | Protein of unknown function (DUF295) ... 767 0.0
AT5G54320.1 | Symbols: | Protein of unknown function (DUF295) ... 699 0.0
AT5G55870.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 586 1e-166
AT5G52940.1 | Symbols: | Protein of unknown function (DUF295) ... 577 9e-164
> AT5G54330.1 | Symbols: | Protein of unknown function (DUF295)
| chr5:22064993-22066063 FORWARD LENGTH=1071
Length=1071
Score = 1901 bits (1029), Expect = 0.0
Identities = 1057/1071 (99%), Gaps = 0/1071 (0%)
Strand=Plus/Plus
Query 1 ATGTCTCTGGTTCTCAACCAGCCCTTGAAGCTACTATGCTTTCGGAGGAAACCTGTACTG 60
||||||||| |||| ||||| || ||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGTCTCTGCTTCTAAACCAACCTTTGAAGCTACTATGCTTTCGGAGGAAACCTGTACTG 60
Query 61 GTAAGATCCTCTCTGATGCAAACCCCTCCTTGTTCAATCGTCGGCGTTCAACCTTGTGGA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 GTAAGATCCTCTCTGATGCAAACCCCTCCTTGTTCAATCGTCGGCGTTCAACCTTGTGGA 120
Query 121 GCTGATCATCTCGGGAGACTCGATGTTATGATGATGTCTCGACGCACTTGCTTGGAAAAG 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 GCTGATCATCTCGGGAGACTCGATGTTATGATGATGTCTCGACGCACTTGCTTGGAAAAG 180
Query 181 AAGGTGCCTCTAGAGTTGGTGCACAGTGATCCCATGGTAACGATCGGGTCATCCCATGGT 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 AAGGTGCCTCTAGAGTTGGTGCACAGTGATCCCATGGTAACGATCGGGTCATCCCATGGT 240
Query 241 TGGGTAGCTACTTTGAAGGACGACGGTATATTGCGTCTCCAAGATGATTTAAACCCGGCT 300
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 241 TGGGTAGCTACTTTGAAGGACGACGGTATATTGCGTCTCCAAGATGATTTTAACCCGGCT 300
Query 301 GCATCGGATATGAACCCTAAACGCATTCCCTTGCCTCCTCTTGTAACTCTGCCCCATTGC 360
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 GCATCGGATACGAACCCTAAACGCATTCCCTTGCCTCCTCTTGTAACTCTGCCCCATTGC 360
Query 361 CAAACTCAAATCGTCACCAATGTGTCAATGTCTTCATCTTCTCCCGAGGATGAGGACTGT 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 CAAACTCAAATCGTCACCAATGTGTCAATGTCTTCATCTTCTCCCGAGGATGAGGACTGT 420
Query 421 GTCGTGGCTGTCAAGTTCTTAGGACCTCAGCTCAGCTTTTGCAGACCGGCTCAACGTAAA 480
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 421 GTCGTGGCTGTCAAGTTCTTAGGACCTCAGCTCAGCTTTTGCAGACCAGCTCAACGTAAA 480
Query 481 CCCGAGTGGATCAACGTCAGAATCGCAAACCCCTGTTTCTACTCCTCCCGTGTCATGTAT 540
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 481 CCCGAGTGGATCAACGTCAGAATCGCAAACCCCTGTTTCTACTCCTCCAGTGTCATGTAT 540
Query 541 TCGGAGAAACATGACATGTTTCGCATTCCCGGATCTGGAGGCCATCTCATTGGATCATGG 600
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 TCGGAGAAAGATGACATGTTTCGCATTCCCGGATCTGGAGGCCATCTCATTGGATCATGG 600
Query 601 GATCTCGGTACACACATGCACACACCCAAGATTCAGAAGCTGCGATTTAAAAAGTTTCCC 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 601 GATCTCGGTACACACATGCACACACCCAAGATTCAGAAGCTGCGATTTAAAAAGTTTCCC 660
Query 661 AATCTTGCAAAGACCACACGGAAGCTTCTGGATTCTTGCTGTACAAGCGAGCACTTGGTG 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 AATCTTGCAAAGACCACACGGAAGCTTCTGGATTCTTGCTGTACAAGCGAGCACTTGGTG 720
Query 721 GAATCACGATCCACTGGTGGTGAAATGTTCTTGGTTAAGTGGTATAAGAGAACCTCTGAG 780
|||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct 721 GAATCACGATCCACTGGTGGTGAAATGTTCTTGGTTAAGTGGTACAAGAGAACCGCTGAG 780
Query 781 ATCGTCAATGGTGTTGCGAAAATGGGAACCGAAGCTTTAATGGTGTTCAAGCTTGACGAA 840
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 781 ATCGTCAATGGTGTTGCGAAAATGGGAACCGAAGCTTTGATGGTGTTCAAGCTTGACGAA 840
Query 841 CAAGGAAACGCGGTTTACACCCAAGACATTGGAGATCTCTGCATGTACCTCTCAAAATCT 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 841 CAAGGAAACGCGGTTTACACCCAAGACATTGGAGATCTCTGCATGTACCTCTCAAAATCT 900
Query 901 GAACCTTTTTGTGTCCCTGCTAGTTCCTTTCCAGGTCTCCCCTCTAACCAGGTTATAATC 960
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 901 GAACCATTTTGTGTCCCTGCTAGTTCCTTTCCAGGTCTCCCCTCTAACCAGGTTATAATC 960
Query 961 TATGATTTCGACGAAGCAGGATTTTTCTTTCTGGATAATTTACGCTTCATTGGTGGTAAT 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 961 TATGATTTCGACGAAGCAGGATTTTTCTTTCTGGATAATTTACGCTTCATTGGTGGTAAT 1020
Query 1021 TCTACATTTAGGGCTCCTTTCCATATTCCACCTCCAAATATGAACAACTAG 1071
|||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1021 TCTACATTTAAGGCTCCTTTCCATATTCCACCTCCAAATATGAACAACTAG 1071
> AT5G55890.1 | Symbols: | Protein of unknown function (DUF295)
| chr5:22622737-22623837 REVERSE LENGTH=1101
Length=1101
Score = 767 bits (415), Expect = 0.0
Identities = 668/785 (85%), Gaps = 38/785 (5%)
Strand=Plus/Plus
Query 165 CACTTGCTTGGAAAAGAAGGTGCCTCTAGAGTTGGTGCACAGTGATCCCATGGTAACGAT 224
||||| ||||||||||||||||||||| ||||||||| | | |||| |||||||||||
Sbjct 198 CACTTACTTGGAAAAGAAGGTGCCTCTGGAGTTGGTG--GA-TAATCCAATGGTAACGAT 254
Query 225 CGGGTCATCCCATGGTTGGGTAGCTACTTTGA---AGGACGACGGTATA-TTGCGTCTCC 280
|||||| ||||||||||||||||||||||||| |||||||||| ||| || |||||||
Sbjct 255 CGGGTCGTCCCATGGTTGGGTAGCTACTTTGAGTCAGGACGACGGAATACTT-CGTCTCC 313
Query 281 AAGATGATTTAAACCCGGCTGCATCGGATATGAACCCTAAACGCATTCCCTTGCCTCCTC 340
|||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 314 AAGATGATCTAAACCCGGCTGCATCGGATACAAACCCTAAACGCATTCCCTTGCCTCCTC 373
Query 341 TTGTAACTCTGCCCCATTGCCAAACTCAAATCGTCACCAATGTGTCAATGTCTTCATCTT 400
||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 374 TTGTAACTCTGCCTCATTGCCAAACTCAAATCGTCACCAATGTGTCAATGTCCTCATCTT 433
Query 401 CTCCCGAGGATGAGGACTGTGTCGTGGCTGTCAAGTTCTTAGGACCTCAGCTCAGCTTTT 460
||||||||||||| ||||||| ||||||||||||||||| |||||||| |||||||||
Sbjct 434 CTCCCGAGGATGAAAACTGTGTTGTGGCTGTCAAGTTCTTGGGACCTCAAATCAGCTTTT 493
Query 461 GCAGACCGGCTCAACGTAAACCC-GAGTGGATCAACGTCAGAATCGCAAACCCCTGTTTC 519
||||||||||||||||||| | | ||||||||||| ||||||||||||||||| ||||||
Sbjct 494 GCAGACCGGCTCAACGTAA-CTCTGAGTGGATCAATGTCAGAATCGCAAACCCTTGTTTC 552
Query 520 TACTCCTCCCGTGTCATGTATTCGGAGAAACATGACATGTTTCGCATTCCCGGATCTGGA 579
|||||||| |||||||||| |||||||||||||||| ||||||||||||||||||| |||
Sbjct 553 TACTCCTCTCGTGTCATGTTTTCGGAGAAACATGACTTGTTTCGCATTCCCGGATCAGGA 612
Query 580 GGCCATCTCATTGGATCATGGGATCTCGGTACACACATGCACACA---CCCAAGATTCAG 636
|||||| |||||| |||||||||||| | | ||| ||||| | |||||| |||||
Sbjct 613 GGCCATATCATTGCTTCATGGGATCTCCACAAAGACAAGCACAAAAATCCCAAGTTTCAG 672
Query 637 AAGCTGCGATTTAAAAAGTTTCCCAATCTTG-CAAAGACCACACG-GAAGCTTCTGGATT 694
| | |||| || |||| |||| || || | ||||||||| ||| || | || ||||||
Sbjct 673 AGGTTGCGGTTCCAAAACCTTCCAAAGCT-GACAAAGACCAAACGAGAGG-TTATGGATT 730
Query 695 CTTGCTGTACAAGCGAGCACTTGGTGGAATCACGATCCACTGGTGGTGAAA-TGTTCTTG 753
| |||| | |||||| ||||||||||| ||| || |||| |||| ||| | ||||||
Sbjct 731 CGTGCTACAAAAGCGAACACTTGGTGGAGTCAAGAACCACCGGTG---AAACT-TTCTTG 786
Query 754 GTTAAGTGGTATAAGA-GAACC-TCTG-AGATCGTCAATGGTGTTGCGAAAATGGGAACC 810
||||||||||| | || | || |||| ||| || | || | ||||| || | ||
Sbjct 787 GTTAAGTGGTACAGGAAGG-CCGTCTGGAGAG-GT-A-TG-T----CGAAATTGAGCACA 837
Query 811 GAAGCTTTAATGGTGTTCAAGCTTGACGAAC-AAGGAAACGCGGTTTACACCCAAGACAT 869
|||||||||||||||| | ||| ||||| | ||||||| || |||||||| |||||||
Sbjct 838 AAAGCTTTAATGGTGTTTAGGCTAGACGA-CGAAGGAAATGCTGTTTACACTAAAGACAT 896
Query 870 TGGAGATCTCTGCATGTACCTCTCAAAATCTGAACCTTTTTGTGTCCCTGCT-AGTTCCT 928
||||||||| ||||| | |||||||||||||||||||||||||||| || || || ||||
Sbjct 897 TGGAGATCTATGCATTTTCCTCTCAAAATCTGAACCTTTTTGTGTCTCT-CTTAGCTCCT 955
Query 929 TTCCA 933
| |||
Sbjct 956 TACCA 960
> AT5G55880.1 | Symbols: | Protein of unknown function (DUF295)
| chr5:22619104-22620204 REVERSE LENGTH=1101
Length=1101
Score = 767 bits (415), Expect = 0.0
Identities = 668/785 (85%), Gaps = 38/785 (5%)
Strand=Plus/Plus
Query 165 CACTTGCTTGGAAAAGAAGGTGCCTCTAGAGTTGGTGCACAGTGATCCCATGGTAACGAT 224
||||| ||||||||||||||||||||| ||||||||| | | |||| |||||||||||
Sbjct 198 CACTTACTTGGAAAAGAAGGTGCCTCTGGAGTTGGTG--GA-TAATCCAATGGTAACGAT 254
Query 225 CGGGTCATCCCATGGTTGGGTAGCTACTTTGA---AGGACGACGGTATA-TTGCGTCTCC 280
|||||| ||||||||||||||||||||||||| |||||||||| ||| || |||||||
Sbjct 255 CGGGTCGTCCCATGGTTGGGTAGCTACTTTGAGTCAGGACGACGGAATACTT-CGTCTCC 313
Query 281 AAGATGATTTAAACCCGGCTGCATCGGATATGAACCCTAAACGCATTCCCTTGCCTCCTC 340
|||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 314 AAGATGATCTAAACCCGGCTGCATCGGATACAAACCCTAAACGCATTCCCTTGCCTCCTC 373
Query 341 TTGTAACTCTGCCCCATTGCCAAACTCAAATCGTCACCAATGTGTCAATGTCTTCATCTT 400
||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 374 TTGTAACTCTGCCTCATTGCCAAACTCAAATCGTCACCAATGTGTCAATGTCCTCATCTT 433
Query 401 CTCCCGAGGATGAGGACTGTGTCGTGGCTGTCAAGTTCTTAGGACCTCAGCTCAGCTTTT 460
||||||||||||| ||||||| ||||||||||||||||| |||||||| |||||||||
Sbjct 434 CTCCCGAGGATGAAAACTGTGTTGTGGCTGTCAAGTTCTTGGGACCTCAAATCAGCTTTT 493
Query 461 GCAGACCGGCTCAACGTAAACCC-GAGTGGATCAACGTCAGAATCGCAAACCCCTGTTTC 519
||||||||||||||||||| | | ||||||||||| ||||||||||||||||| ||||||
Sbjct 494 GCAGACCGGCTCAACGTAA-CTCTGAGTGGATCAATGTCAGAATCGCAAACCCTTGTTTC 552
Query 520 TACTCCTCCCGTGTCATGTATTCGGAGAAACATGACATGTTTCGCATTCCCGGATCTGGA 579
|||||||| |||||||||| |||||||||||||||| ||||||||||||||||||| |||
Sbjct 553 TACTCCTCTCGTGTCATGTTTTCGGAGAAACATGACTTGTTTCGCATTCCCGGATCAGGA 612
Query 580 GGCCATCTCATTGGATCATGGGATCTCGGTACACACATGCACACA---CCCAAGATTCAG 636
|||||| |||||| |||||||||||| | | ||| ||||| | |||||| |||||
Sbjct 613 GGCCATATCATTGCTTCATGGGATCTCCACAAAGACAAGCACAAAAATCCCAAGTTTCAG 672
Query 637 AAGCTGCGATTTAAAAAGTTTCCCAATCTTG-CAAAGACCACACG-GAAGCTTCTGGATT 694
| | |||| || |||| |||| || || | ||||||||| ||| || | || ||||||
Sbjct 673 AGGTTGCGGTTCCAAAACCTTCCAAAGCT-GACAAAGACCAAACGAGAGG-TTATGGATT 730
Query 695 CTTGCTGTACAAGCGAGCACTTGGTGGAATCACGATCCACTGGTGGTGAAA-TGTTCTTG 753
| |||| | |||||| ||||||||||| ||| || |||| |||| ||| | ||||||
Sbjct 731 CGTGCTACAAAAGCGAACACTTGGTGGAGTCAAGAACCACCGGTG---AAACT-TTCTTG 786
Query 754 GTTAAGTGGTATAAGA-GAACC-TCTG-AGATCGTCAATGGTGTTGCGAAAATGGGAACC 810
||||||||||| | || | || |||| ||| || | || | ||||| || | ||
Sbjct 787 GTTAAGTGGTACAGGAAGG-CCGTCTGGAGAG-GT-A-TG-T----CGAAATTGAGCACA 837
Query 811 GAAGCTTTAATGGTGTTCAAGCTTGACGAAC-AAGGAAACGCGGTTTACACCCAAGACAT 869
|||||||||||||||| | ||| ||||| | ||||||| || |||||||| |||||||
Sbjct 838 AAAGCTTTAATGGTGTTTAGGCTAGACGA-CGAAGGAAATGCTGTTTACACTAAAGACAT 896
Query 870 TGGAGATCTCTGCATGTACCTCTCAAAATCTGAACCTTTTTGTGTCCCTGCT-AGTTCCT 928
||||||||| ||||| | |||||||||||||||||||||||||||| || || || ||||
Sbjct 897 TGGAGATCTATGCATTTTCCTCTCAAAATCTGAACCTTTTTGTGTCTCT-CTTAGCTCCT 955
Query 929 TTCCA 933
| |||
Sbjct 956 TACCA 960
> AT5G54320.1 | Symbols: | Protein of unknown function (DUF295)
| chr5:22062805-22063914 FORWARD LENGTH=1110
Length=1110
Score = 699 bits (378), Expect = 0.0
Identities = 708/860 (82%), Gaps = 52/860 (6%)
Strand=Plus/Plus
Query 164 GCACTTGC-TTGGAAAAGAAGGTGCCTCTAGAGTTGGTGCACAG-TGATCCCA-TGGTAA 220
|||||| | ||||| |||||||||||| | | |||| || | | | || | | ||||
Sbjct 206 GCACTT-CTTTGGATAAGAAGGTGCCTATGGCGTTGTTGTA-TGATAAT-GAACTTGTAA 262
Query 221 CGATCGGGTCATCCCATGGTTGGGTAGCTACTTTGA---AGGACGACGGTA-TATTGCGT 276
| ||||| ||||||||||| ||| |||||||||||| |||||||||| | || |||||
Sbjct 263 CCATCGGTTCATCCCATGGCTGGATAGCTACTTTGAGTCAGGACGACGG-ACTACTGCGT 321
Query 277 CTCCAAGATGATTTAAACCCGGCTGCATCGGATA-TGAACCCTAAACGCATTCCCTTGCC 335
|||||||| ||| ||||||||| ||||||||||| | ||||| |||||||||||| ||||
Sbjct 322 CTCCAAGACGATCTAAACCCGGTTGCATCGGATACT-AACCCGAAACGCATTCCCCTGCC 380
Query 336 TCCTCTTGTAACTCTGCCC-CATTGCCAAACTCAAATCGTCACCAATGTGTCAATGTCTT 394
||||||||||||||| ||| |||||||||||||||||||| |||||||||||| ||||
Sbjct 381 TCCTCTTGTAACTCT-CCCTCATTGCCAAACTCAAATCGTTACCAATGTGTCATTGTCCG 439
Query 395 CATCTTCTCCCGAGGATGAGGACTGTGTCGTGGCTGTCAAGTTCTTAGGACCTCAGCTCA 454
|||||||||| |||||||| |||||||| |||||||||||||| || |||||||||||||
Sbjct 440 CATCTTCTCCTGAGGATGAAGACTGTGTTGTGGCTGTCAAGTTTTTGGGACCTCAGCTCA 499
Query 455 GCTTTTGCAGACCGGCTCAACGTAAAC-CCGAGTGGATCAACGTCAGAATCGCAAACCCC 513
|||||||||||||||||||| |||| | |||||||||||||| ||||||||| ||||||
Sbjct 500 GCTTTTGCAGACCGGCTCAAAGTAA-CTCCGAGTGGATCAACATCAGAATCGAAAACCCT 558
Query 514 TGTTTCTACTCCTCCCGTGTCATGTATTCGGAGAAACATGACATGTTTCGCATTCCCGGA 573
|||||||||| || ||||||||||| || ||||| || |||||||| |||||||||||
Sbjct 559 TGTTTCTACTTATCTCGTGTCATGTACTCCAAGAAAGATAACATGTTTTGCATTCCCGGA 618
Query 574 TCTGGAGGCCATCTCATTGGATCATGGGATCTCGGTACACACATGCACACACCCAAGATT 633
|||||||| || ||||||||| ||||||||||| | ||||||| ||| | | |
Sbjct 619 TCTGGAGGACACCTCATTGGAACATGGGATCTCCGCACACACAAGCATA-ATTT--G--- 672
Query 634 CAGAAGCT-GC-GATTTAAAAAGTTTCCCAATCTTG-CAAAGACCACACGGAAGCTTCTG 690
|||| ||| || | ||| |||| ||||||| || | ||||||||| || |||||| |||
Sbjct 673 CAGA-GCTTGCAG-TTTCAAAACCTTCCCAAGCT-GACAAAGACCAAACAGAAGCTACTG 729
Query 691 GATTCTTGCTGTACA-AGCGAGCACTTGGTGGAATCACGATCCACTGGTGGTGAAA-TGT 748
||||| || || | | |||||||||||||| || |||| | | | |||||||| | |
Sbjct 730 GATTCATGTTGCA-AGAGCGAGCACTTGGTTGAGTCAC---C-A--GCTGGTGAAACT-T 781
Query 749 TCTTGGTTAAGTGGTATAAGAGAACCT-CT-G-A-GATCGTCAATGGTGTTGCGAAAATG 804
|||||||||||||||| |||| | || | | | |||| |||| ||| ||||| |||||
Sbjct 782 TCTTGGTTAAGTGGTACAAGA-AGTCTTCAAGCAAGATCATCAAGGGTATTGCGCAAATG 840
Query 805 GGAAC-CGAAGCTTTAATGGTGTTCAAGCTTGACGAACAAGGAAACGCGGTTTACACCCA 863
||| | ||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 841 AAAACAC-AAGCTTTAATGGTGTTCAAGCTTGACGAACAAGGAAACGCGGTTTACACTCA 899
Query 864 AGACATTGGAGATCTCTGCATGTACCTCTCAAAATCTGAACCTTTTTGTGTCCCTGCTAG 923
||| ||||||||||||||||| | || ||||| ||||||||||||||||||| ||||||
Sbjct 900 AGATATTGGAGATCTCTGCATTTTTCTTTCAAAGTCTGAACCTTTTTGTGTCCTTGCTAG 959
Query 924 TTCCTTTCCAGGTCTCC-CCTCTAACCAGGTTATAATCTATGATT-TCGACGAAG-CAGG 980
|| ||||| || || || ||||| | || ||| ||| ||| | | ||||||| | ||
Sbjct 960 CTCTTTTCCCGGACTGTGCC-CTAACAATGTCATACTCTTTGACTGT-GACGAAGGC-GG 1016
Query 981 ATTTTTCTTTCTGGATAATT 1000
|||||| ||||||| |||
Sbjct 1017 CTTTTTCGATCTGGATGATT 1036
Score = 91.6 bits (49), Expect = 1e-17
Identities = 61/67 (91%), Gaps = 0/67 (0%)
Strand=Plus/Plus
Query 7 CTGGTTCTCAACCAGCCCTTGAAGCTACTATGCTTTCGGAGGAAACCTGTACTGGTAAGA 66
||| |||||||||| ||||||||||||||||||||||||||||||||||| |||| |||
Sbjct 7 CTGCTTCTCAACCAACCCTTGAAGCTACTATGCTTTCGGAGGAAACCTGTGTTGGTGAGA 66
Query 67 TCCTCTC 73
|| ||||
Sbjct 67 TCATCTC 73
> AT5G55870.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana
protein match is: Protein of unknown function (DUF295)
(TAIR:AT5G54330.1); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink). | chr5:22612637-22613311 REVERSE LENGTH=675
Length=675
Score = 586 bits (317), Expect = 1e-166
Identities = 355/374 (95%), Gaps = 0/374 (0%)
Strand=Plus/Plus
Query 1 ATGTCTCTGGTTCTCAACCAGCCCTTGAAGCTACTATGCTTTCGGAGGAAACCTGTACTG 60
||||||||| |||| ||||| || ||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGTCTCTGCTTCTAAACCAACCTTTGAAGCTACTATGCTTTCGGAGGAAACCTGTACTG 60
Query 61 GTAAGATCCTCTCTGATGCAAACCCCTCCTTGTTCAATCGTCGGCGTTCAACCTTGTGGA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 GTAAGATCCTCTCTGATGCAAACCCCTCCTTGTTCAATCGTCGGCGTTCAACCTTGTGGA 120
Query 121 GCTGATCATCTCGGGAGACTCGATGTTATGATGATGTCTCGACGCACTTGCTTGGAAAAG 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 GCTGATCATCTCGGGAGACTCGATGTTATGATGATGTCTCGACGCACTTGCTTGGAAAAG 180
Query 181 AAGGTGCCTCTAGAGTTGGTGCACAGTGATCCCATGGTAACGATCGGGTCATCCCATGGT 240
||||| |||||||||||||| | |||||||| |||||||||||||||||||||||||||
Sbjct 181 AAGGTACCTCTAGAGTTGGTAAATAGTGATCCAATGGTAACGATCGGGTCATCCCATGGT 240
Query 241 TGGGTAGCTACTTTGAAGGACGACGGTATATTGCGTCTCCAAGATGATTTAAACCCGGCT 300
|||||||||||||||||||| || |||||||||||||||||||| ||| ||||||||| |
Sbjct 241 TGGGTAGCTACTTTGAAGGAGGATGGTATATTGCGTCTCCAAGACGATCTAAACCCGGTT 300
Query 301 GCATCGGATATGAACCCTAAACGCATTCCCTTGCCTCCTCTTGTAACTCTGCCCCATTGC 360
|||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct 301 GCATCGGATACAAACCCTAAACGCATTCCCCTGCCTCCTCTTGTAACTCTGCCTCATTGC 360
Query 361 CAAACTCAAATCGT 374
||||| ||||||||
Sbjct 361 CAAACCCAAATCGT 374
> AT5G52940.1 | Symbols: | Protein of unknown function (DUF295)
| chr5:21472201-21473602 FORWARD LENGTH=1402
Length=1402
Score = 577 bits (312), Expect = 9e-164
Identities = 622/770 (81%), Gaps = 27/770 (4%)
Strand=Plus/Plus
Query 172 TTGGAAAAGAAGGTGCCTCTAGAGTTGGTGCACAGTGATCCCATGGTAACGATCGGGTCA 231
|||||||||||||| || | ||||||||| | | | ||| |||||| ||||||||
Sbjct 299 TTGGAAAAGAAGGTACCAATGGAGTTGGTGGATGGAAAGGCCAGGGTAACTATCGGGTCC 358
Query 232 TCCCATGGTTGGGTAGCTACTTTGAAGGACGACGGTATATTGCGTCTCCAAGATGATTTA 291
|| ||||| ||||||||||||||||| ||||| || ||| ||||||||||||| ||| ||
Sbjct 359 TCTCATGGCTGGGTAGCTACTTTGAAAGACGATGGAATAGTGCGTCTCCAAGACGATCTA 418
Query 292 AACCCGGCTGCATCGGATATGA-ACCCTAAACGCATTCCCTTGCCTCCTCTTGTAACTCT 350
|||| || |||||| |||| | | || |||||||||||| ||||||||||||| |||||
Sbjct 419 AACCTGGTTGCATCTGATA-CAGATCCGAAACGCATTCCCCTGCCTCCTCTTGTGACTCT 477
Query 351 GCCCCATTGCCAAACTCAAA-TCGTCACCAATGT-GTCAATGTCTTCATCTTCTCCCGAG 408
||| ||||||||||| |||| | |||||||| || | | |||||||| |||||||| |||
Sbjct 478 GCCTCATTGCCAAAC-CAAAGTTGTCACCAACGTCG-CCATGTCTTCTTCTTCTCCTGAG 535
Query 409 GATGAGGACTGTGTCGTGGCTGTCAAGTTCTTAGGACCTCAGCTCAGCTTTTGCAGACCG 468
||||| |||||||| || ||| |||||||||||||||||||||||||||| || |||||
Sbjct 536 GATGAAGACTGTGTTGTCGCTCTCAAGTTCTTAGGACCTCAGCTCAGCTTATGTAGACCA 595
Query 469 GCTCAACGTAAAC-CCGAGTGGATCAACGTCAGAATCGCAAACCCCTGTTTCTACTCCTC 527
|||||| | |||| ||||||||| |||| ||||||||| |||||| ||||||||||| ||
Sbjct 596 GCTCAAAG-AAACTCCGAGTGGACCAACATCAGAATCGAAAACCCATGTTTCTACTCATC 654
Query 528 CCGTGTCATGTATTCGGAGAAACATGACATGTTTCGCATTCCCGGATCTGGAGGCCATCT 587
|| ||| |||| ||| ||||| | | || |||||| |||| ||||||||||| || ||
Sbjct 655 CCCTGTTATGTTTTCCAAGAAAGACGGCACGTTTCGAATTCTTGGATCTGGAGGTCACCT 714
Query 588 CATTGGATCATGGGATCTCGGTACACACATGCACACACCCAAGATTCAGAAGCTGCGATT 647
||||||||||||||||||| | ||||| | ||| |||||||||||||| | |||||||
Sbjct 715 CATTGGATCATGGGATCTCCACAAACACAAGAACAAACCCAAGATTCAGAGGTTGCGATT 774
Query 648 TAAAAAGTTTCCCAATCTTGCAAAGACCACACGGAAGCTTCTGG-ATTCTTGCTGTACAA 706
||||| ||||| | || | ||||||| | || |||| || | |||| || || || |
Sbjct 775 CAAAAACCTTCCCGAGCTCACCAAGACCAAAAGGGAGCT-CTTGCATTCGTGTTGCACGA 833
Query 707 GCGAGCACTTGGTGGAATCA-CGATCCACTGGTGGTGAAATGTTCTTGGTTAAGTGGTAT 765
|| | |||||||| || ||| | | |||| || || | ||||||||||||||||||
Sbjct 834 GCCAACACTTGGTTGAGTCAACAA-CCACAAATGA-GAC-T-TTCTTGGTTAAGTGGTAT 889
Query 766 AAGAGAACCTCTGAGATCGTCAATGGTGTTGCGAAAATGGGAACC-GAAGCTTTAATGGT 824
| | ||| | | ||| |||||| || | ||||||| ||| || ||| |||||||
Sbjct 890 A-G-GAAGGAC--ACATC--CAATGGCGTGGTGAAAATGAAAACAAGA-GCTGTAATGGT 942
Query 825 GTTCAAGCT-TGACGAACAAGG-AAACGCGGTTTACACCCAAGACATTGGAGATCTCTGC 882
|||||||| | ||||| |||| ||| || |||||||| |||||||| ||||||||||||
Sbjct 943 CTTCAAGCTAT-ACGAAGAAGGGAAA-GCTGTTTACACTCAAGACATCGGAGATCTCTGC 1000
Query 883 ATGTACCTCTCAAAATCTGAACCTTTTTGTGTCCCTGCTAGTTCCTTTCC 932
|| | ||| ||||| |||||||| ||||||||| ||||||| ||||||||
Sbjct 1001 ATTTTCCTGTCAAAGTCTGAACCCTTTTGTGTCACTGCTAGCTCCTTTCC 1050
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 52459569525
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5