BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg495591 Length=1324 Score E Sequences producing significant alignments: (Bits) Value AT5G55090.1 | Symbols: MAPKKK15 | mitogen-activated protein kin... 1969 0.0 AT4G26890.1 | Symbols: MAPKKK16 | mitogen-activated protein kin... 568 7e-161 > AT5G55090.1 | Symbols: MAPKKK15 | mitogen-activated protein kinase kinase kinase 15 | chr5:22356852-22358198 REVERSE LENGTH=1347 Length=1347 Score = 1969 bits (1066), Expect = 0.0 Identities = 1249/1337 (93%), Gaps = 14/1337 (1%) Strand=Plus/Plus Query 1 ATGGAGGAACTAAACTGGATAAGAGGACCAATCATAGGCCGAGGCTCAACAGCTACTGTC 60 |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1 ATGGAGGAACAAAACTGGATAAGAGGACCAATCATAGGTCGAGGCTCAACAGCTACTGTC 60 Query 61 TCACTTGCAATCACAAACTCCGGTGACTTCTTCGCCGTCAAATCCACCGAGTTTTCTTCA 120 ||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||| Sbjct 61 TCACTTGGAATCACAAATTCCGGTGACTTCTTCGCCGTCAAATCCGCCGAGTTTTCTTCA 120 Query 121 TCGGCGTTTTTGCAGAGAGAACAATCGATTTTATCGAATTTGAGCTCTCCTTATATAGTC 180 |||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||| Sbjct 121 TCGGCGTTTTTGCAGAGAGAACAATCGATTTTGTCGAAGTTGAGCTCTCCTTACATAGTC 180 Query 181 AAGTACATTGGTTCTAATGTAACGACGGAGAACGACAAATTGATGTATAATCTCTTGCTG 240 ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| || Sbjct 181 AAGTACATTGGTTCTAATGTAACGAAGGAGAACGACAAGTTGATGTATAATCTCTTAATG 240 Query 241 GAATATGTTTCCGGCGGGAGTATGCACGATTTGATGAAGAATTCCGGCGGGAAGTTGCCG 300 || ||||||||||| |||||| | ||||||||||| |||||||||||||||||||| ||| Sbjct 241 GAGTATGTTTCCGGTGGGAGTCTTCACGATTTGATCAAGAATTCCGGCGGGAAGTTACCG 300 Query 301 GAGCCGGTGATTAGATCCTACACGCGTCAGATATTAAAAGGTTTGATGTATCTTCATGAT 360 |||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct 301 GAGCCGTTGATTAGATCCTACACACGTCAGATATTGAAAGGTTTGATGTATCTTCATGAT 360 Query 361 CAAGGTATTGTTCATTGCGATTTGAAGAGCCAGAATGTGATGATCGGAGGAGAGATTGCA 420 ||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 361 CAAGGAATCGTTCATTGCGATGTGAAGAGCCAGAATGTGATGATCGGAGGAGAGATTGCG 420 Query 421 AAGATCGTTGATTTGGGCTGTGCTAAAACGGTGGAAGAGGATGAGAATTTGGAATTTTCC 480 |||||||| |||||||| ||||||||||||||||||||| ||||||| |||||||||||| Sbjct 421 AAGATCGTCGATTTGGGTTGTGCTAAAACGGTGGAAGAGAATGAGAACTTGGAATTTTCC 480 Query 481 GGTACACCGGCGTTTATGTCGCCGGAAGTAGCACGTGGTGAAGAACAGAGTTTTCCAGCT 540 |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct 481 GGTACACCGGCGTTTATGTCACCGGAGGTAGCACGTGGTGAAGAACAGAGTTTTCCAGCT 540 Query 541 GATGTATGGGCTTTGGGGTGTACGGTGATAGAGATGGCTACTGGGACAAGTCCTTGGCCG 600 ||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||| Sbjct 541 GATGTTTGGGCTTTGGGGTGTACGGTGATAGAGATGGCTACAGGGTCAAGTCCTTGGCCG 600 Query 601 GAGTTAAACGACGTCGTTGCTGCGATTTATAAGATTGGTTTCACCGGTGAGTCGCCGGAG 660 ||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||| | Sbjct 601 GAGCTAAACGACGTCGTTGCTGCTATTTATAAGATTGGTTTCACCGGCGAGTCGCCGGTG 660 Query 661 ATTCCGGTTTGGTTATCGGATAAAGGTCAAGACTTTTTGAGGAAATGTTTGAGAAAAGAT 720 |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct 661 ATTCCGGTTTGGTTATCGGAGAAAGGTCAAGACTTTTTGAGGAAGTGTTTGAGAAAAGAT 720 Query 721 TCAAAACAGAGATGGAGTGTTCAAGAATTGCTTCAACATCCGTTTCTTGATGAAGAAG-- 778 | ||||||||||||| |||| ||||||||||||||||||||||||| || ||||||| Sbjct 721 CCGAAACAGAGATGGACTGTTGAAGAATTGCTTCAACATCCGTTTCTCGACGAAGAAGAC 780 Query 779 -ACGAC---GACGAAGCTCGTAATTGTCTGAATTCTTCATCTCCAAGTACTGTGTTGGAT 834 ||||| ||| || || |||| |||||||||||||||||||| ||||||||||||||| Sbjct 781 AACGACAGTGACCAAACTGGTAACTGTCTGAATTCTTCATCTCCTAGTACTGTGTTGGAT 840 Query 835 CAA-GGTTTTTGGGATTTATGTGAAACTTCAAGAAGTCGATTCATTAAAGCGGATCACGA 893 ||| || ||||||||||||||||||||||| |||||| |||||||||||| ||||||||| Sbjct 841 CAACGG-TTTTGGGATTTATGTGAAACTTCGAGAAGTAGATTCATTAAAGAGGATCACGA 899 Query 894 AGACCCATTTGCAAATTCTACAAATTTCTTATGGGAT---GATTCGTTACCGGGTGATCG 950 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 900 AGACCCATTTGCAAATTCTACAAATTTCTTATGGGATGACGATTCTTTACCGGGTGATCG 959 Query 951 GATCAAGAAACTCGCCGGAGATGAGAATTCCGGTGAACTAGAGTGGGAAACGAACGGTTG 1010 ||||||||||||||||||||| |||| ||||||||||| ||| ||||||||||||||||| Sbjct 960 GATCAAGAAACTCGCCGGAGACGAGAGTTCCGGTGAACCAGACTGGGAAACGAACGGTTG 1019 Query 1011 GATTGAAGTTAGAGGAGAGATAGAGAAACGTAACGAAGAAGAAGATGAGAATTGCGTTGA 1070 ||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1020 GATTGAAGTAAGGGGAGAGATAGAGAAACGTAACGAGGAAGAAGATGAGAATTGCGTTGA 1079 Query 1071 AGCAACGTCATTGGAGGA-G--GAAGAAGAAGTGGGAGGATTTGAGAATTGGATCTTGGA 1127 |||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||| Sbjct 1080 AGCAACGTCATTGGAGGAGGACGAAGAAGAAGTGGGAGGATTTGAGAATTGGATCTGGGA 1139 Query 1128 TCAACAAGACAGCTTGTTCTTGGAATATTCCCCTGAGGACAACATTAATTATTTTTACTC 1187 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1140 TCAACAAGACAGCTTGTTCTTGGAATATTCCCCTGAGGACAACATTTATTATTTTTACTC 1199 Query 1188 TTATAATAACATCTTTCATGAAGATATAATTCTATATTATGATCATCTTGAAGATGGTTT 1247 |||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct 1200 TTATTATAACATCTTTGATGAAGATATAATTCTATATTATGATCATCTTGAAGATTGTTT 1259 Query 1248 TGTACTAAAAGATGATGATAATAATAAGAAAATTCGTTTCTTTAGCCACATTTCAAGTTC 1307 |||||||||| |||||||||||||||||| ||| |||||||||||||||| ||| ||| Sbjct 1260 TGTACTAAAATTTGATGATAATAATAAGAAGATTTTTTTCTTTAGCCACATTACAAATTC 1319 Query 1308 TTGTTTTGAGATTACTA 1324 ||||||||||||||||| Sbjct 1320 TTGTTTTGAGATTACTA 1336 > AT4G26890.1 | Symbols: MAPKKK16 | mitogen-activated protein kinase kinase kinase 16 | chr4:13511839-13513406 FORWARD LENGTH=1568 Length=1568 Score = 568 bits (307), Expect = 7e-161 Identities = 938/1227 (76%), Gaps = 105/1227 (9%) Strand=Plus/Plus Query 16 TGGATAAGAGGACCAATCATAGGCCGAGGCTCAACAGCTACTGTCTC-ACTTGCAATCAC 74 |||| ||||||||||||||| || |||||||| || || |||||||| | | |||||| | Sbjct 246 TGGACAAGAGGACCAATCATCGGTCGAGGCTCTACCGCCACTGTCTCTA-TAGCAATCTC 304 Query 75 AAACTCCGGTGA-CTTCTTCGCCGTCAAATCCACCGAGTTTTCTTCATCGGCGTTTTTGC 133 || ||||||||| | |||||||||||||||| |||| || ||||| ||| | || |||| Sbjct 305 AAGCTCCGGTGAGC-TCTTCGCCGTCAAATCTGCCGACTTATCTTCTTCGTCCTTGTTGC 363 Query 134 AGAGAGAACAATCGATTTTATCGA-ATTTGAGCTCTCCTTATATAGTCAAGTACATTGGT 192 ||| ||| ||||| || || || | | |||||||||||| | || ||||| ||||| || Sbjct 364 AGAAAGAGCAATCAATCTTGTCTACA-TTGAGCTCTCCTCACATGGTCAAATACATAGGC 422 Query 193 TCTAATGTAACGACG-GAGAACGACAAATTGATGTATAATCT-CTTGCTGGAATATGTTT 250 || | ||||| || |||| | || |||| |||| ||| | | || ||||||| |||| Sbjct 423 ACTGGTTTAACG-CGCGAGAGCAACGGATTGGTGTACAATATAC-TGATGGAATACGTTT 480 Query 251 CCGGCGGGAGTATGCACGATTTGATGAAGAATTCCGGCGGGAAGTTGCCGGAGCCGGTGA 310 | || || | | | |||||||| || || ||||||||||| |||||||||||||||| || Sbjct 481 CTGGTGGAAATCTTCACGATTTAATCAAAAATTCCGGCGGTAAGTTGCCGGAGCCGGAGA 540 Query 311 TTAGATCCTACACGCGTCAGA-TATTAAAAGGTTTGATGTATCTTCATGATCA-AGGTAT 368 | ||||| ||||| ||||||| | || || |||||| |||||||||| || | ||| || Sbjct 541 TAAGATCATACACTCGTCAGATTCTT-AACGGTTTGGTGTATCTTCACGA-GAGAGGGAT 598 Query 369 TGTTCATTGCGATTTGAAGAGCCAGAATGTGAT-GAT-CGGAGGA--GAG-ATTGCAAAG 423 |||||| ||||| ||||||||||| || || | | | ||| | | | ||| ||| Sbjct 599 TGTTCACTGCGACTTGAAGAGCCATAACGTTCTGGTTGAGGAAAATGGCGTTTTG-AAA- 656 Query 424 ATCGTTGATTTGGGCTGTGCTAAAACGGTGGAAGAGGATGAGAATTTGGAATTTTCCGGT 483 |||| || |||| ||||||||| |||| ||| || | ||||||||||||| Sbjct 657 ATCGCCGACATGGGTTGTGCTAAATCGGT---------TGACAAGTCGGAATTTTCCGGT 707 Query 484 ACACCGGCGTTTATGTCGCCGGAAGTAGCACGTGGTGAAGAACAGAGTTTTCCAGCTGAT 543 ||||||||||||||| | || ||||| || ||||||||||||||||| ||||| |||||| Sbjct 708 ACACCGGCGTTTATGGCCCCAGAAGTTGCTCGTGGTGAAGAACAGAGGTTTCCGGCTGAT 767 Query 544 GTATGGGCTTTGGGGTGTACGGTGATAGAGATGGCT-ACTGGGA-CAAGTCCTTGGCCGG 601 || ||||||||||| |||||| |||| ||||| | | ||| ||| |||| |||||||||| Sbjct 768 GTGTGGGCTTTGGGATGTACGATGATCGAGAT-GATGACT-GGATCAAGCCCTTGGCCGG 825 Query 602 AGTTAAACGACGTCGTTGCTGCGATTTATAAGATTGG-TTT-CACCGGTGAGTCGCCGGA 659 |||||||||||||||||||||| || ||||||||||| ||| || || |||||||||| Sbjct 826 AGTTAAACGACGTCGTTGCTGCAATGTATAAGATTGGATTTTCA--GGCGAGTCGCCGGC 883 Query 660 GATTCCGGTTTGGTTATCGGATAAAGGTCAAGACTTTTTGAGGAAATGTTTGA-GAAAAG 718 |||||| | ||| |||||||||||| | |||||||| ||| ||| ||||| | | || | Sbjct 884 GATTCCCGCGTGGATATCGGATAAAGCTAAAGACTTTCTGAAGAATTGTTTAAAGGAA-G 942 Query 719 ATTCAAAA-CAGAGATGGAGTGTTCAAGAATTGCTTCAACATCCGTTTCTTGATGAAGAA 777 || ||||| |||||||||| ||| ||||||| ||| ||||||| ||||||||||| || Sbjct 943 AT-CAAAAACAGAGATGGACTGTGGAAGAATTACTTAAACATCCATTTCTTGATGACGAC 1001 Query 778 GACGACGACGAAG-CTCGTAATTGTCTGAATT-C-----TTCATCTCCAAGTACTGTGTT 830 || || | || | || ||||| |||| | ||| |||||||| |||||||| Sbjct 1002 GAAGAAT-CTCAGACAAGTGATTGTTTGAAGAACAAGACTTCTTCTCCAAGCACTGTGTT 1060 Query 831 GGATCAAGGTTTTTGGGATTTATGTGAAA-CTTCAAGAAGTCGA-TTCA-TTAA-AGCGG 886 ||||||| | |||||||||| ||| |||| || ||| ||||| | || | || | | Sbjct 1061 GGATCAACGATTTTGGGATTCATGCGAAAGCTCCAA-AAGTC-ACTT-AGTTTCGATTG- 1116 Query 887 ATCACGAAGACCCATTTGCA-AATTCTACA-AATTTCTTATGGGATGATTCGTTACCGGG 944 |||| |||||||| ||||| ||| || | ||| ||| ||| || | | ||||| Sbjct 1117 ATCATGAAGACCCTTTTGCTGAATACT-CGGAAT--CTT-TGG-AT--T-C---ACCGGC 1165 Query 945 TGATCGGATCAAGAAACTCGCCGGAGATGAGAATTCCGG-TGAACTAGAGTGGGAAACG- 1002 |||||||||| |||||||||||||||||||| ||| | | | || || ||||| ||| Sbjct 1166 TGATCGGATCGAGAAACTCGCCGGAGATGAGTTTTCAAGCTTA-CTTGATTGGGATACGG 1224 Query 1003 AA--CGGT------TGGATTGAAGTTAGAGGAGAGA----TAGAGAAAC-GT-AA-CGA- 1046 || || | |||||| |||| ||||| |||| || |||||| | || || Sbjct 1225 AAGACGATGGCGGATGGATTCAAGTGAGAGGCGAGAAACATAAAGAAACCGAGAAACGCG 1284 Query 1047 A-GA--A-GAAGATGAGAATTGCGTTGAAGCAACGTCATTGGAGGAGGAAGAAGAAGTGG 1102 | | | ||||| | || |||||||||||||||||||| | | | || || || Sbjct 1285 ACGGCGACGAAGACGTGATTTGCGTTGAAGCAACGTCATCGTCGCA--AAC--GAT-TGA 1339 Query 1103 GAGGATTTGA-GAATTGGATCTTGGATCAACAAGACAGCTTGTTCTTGGAATATTCCCCT 1161 || | |||| || |||||| || || | |||||||||||||||| |||||||||| || Sbjct 1340 -AGAAGTTGAAGA-TTGGAT-TTCGA--ATCAAGACAGCTTGTTCTCGGAATATTCCTCT 1394 Query 1162 GAGGACAACATTAATTATTTTTACTCT 1188 || |||| ||||||| |||| |||||| Sbjct 1395 GACGACATCATTAATAATTTCTACTCT 1421 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 65160307410 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5