BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg495608
Length=2127
Score E
Sequences producing significant alignments: (Bits) Value
AT5G55230.2 | Symbols: MAP65-1 | microtubule-associated protein... 1718 0.0
AT4G26760.1 | Symbols: MAP65-2 | microtubule-associated protein... 1609 0.0
> AT5G55230.2 | Symbols: MAP65-1 | microtubule-associated proteins
65-1 | chr5:22401997-22405381 FORWARD LENGTH=2224
Length=2224
Score = 1718 bits (930), Expect = 0.0
Identities = 1006/1042 (97%), Gaps = 8/1042 (1%)
Strand=Plus/Plus
Query 1037 AGGCTGAGGTGGAAGTGGATAGGCTTGACCAGCTTAAAGCTAGCCGAATGAAGGAAATTG 1096
|||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct 1154 AGGCTGAGGTGGAAGTTGATAGGCTTGACCAGCTGAAAGCTAGCCGAATGAAAGAAATTG 1213
Query 1097 CGTTCAAGAAGCAATCTGAGCTTGAAGAGATATATGCTCGTGCCCATGTAGAAATAAACC 1156
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 1214 CGTTCAAGAAGCAATCTGAGCTTGAAGAGATATATGCTCGTGCCCATGTAGAAGTTAACC 1273
Query 1157 CGGAATCTGCTCGTGAGAGAATCATGTCGCTGATTGATTCTGGAAACGTTGAGCCTACTG 1216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1274 CGGAATCTGCTCGTGAGAGAATCATGTCGCTGATTGATTCTGGAAACGTTGAGCCTACTG 1333
Query 1217 AATTATTGGCAGACATGGATAGCCAGATAGCAAAGGCTAAGGAAGAAGCATTTAGTAGAA 1276
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1334 AATTATTGGCAGACATGGATAGCCAGATATCAAAGGCTAAGGAAGAAGCATTTAGTAGAA 1393
Query 1277 AAGATATATTGGACCGAGTCGAGAAATGGATGTCAGCTTGTGAGGAAGAGAGCTGGCTAG 1336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1394 AAGATATATTGGACCGAGTCGAGAAATGGATGTCAGCTTGTGAGGAAGAGAGCTGGCTAG 1453
Query 1337 AAGACTACAATCGGGATCAGAACAGGTACAGTGCAAGCAGAGGCGCACACTTGAATCTCA 1396
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct 1454 AAGACTACAATCGGGATCAGAACAGGTACAGCGCAAGCAGAGGTGCACACTTGAATCTCA 1513
Query 1397 AGAGAGCTGAGAAAGCTCGGATTCTGGTTAGCAAGATTCCTGCCATGGTTGACACATTGG 1456
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1514 AGAGAGCTGAGAAAGCTCGGATTCTGGTTAGCAAGATTCCTGCCATGGTTGACACATTAG 1573
Query 1457 TTGCCAAGACCCGGGCGTGGGAAGAGGAACACAGCATGTCCTTTGCCTACGATGGTGTTC 1516
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1574 TTGCCAAGACCCGGGCTTGGGAAGAAGAACACAGCATGTCCTTTGCCTACGATGGTGTTC 1633
Query 1517 CTCTGCTAGCAATGCTAGACGAGTATGGTATGCTTAGGCAAGAACGAGAAGAGGAGAAAC 1576
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1634 CTCTGCTAGCTATGCTAGACGAGTACGGTATGCTTAGGCAAGAACGAGAAGAGGAGAAAC 1693
Query 1577 GGAGGCTGAGGGAACAAAAGAAGGTTCAAGAACAGCCACACATAGAGCAAGACTCTGCCT 1636
||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct 1694 GGAGGCTGAGGGAACAAAAGAAGGTTCAAGAACAGCCACACGTAGAGCAAGAATCTGCCT 1753
Query 1637 TTAGCACCAGGCCAAGCCCTGCTAGACCGGTCAGTGCTAAGAAAACGGTGGGGCCACGAG 1696
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1754 TTAGCACCAGGCCAAGCCCTGCAAGACCGGTCAGTGCTAAGAAAACGGTGGGGCCACGAG 1813
Query 1697 CTAACAACGGAGGAGCCAATGGAACACCA-AACCGGCGTTTATCTTTGAATGCAAACCAG 1755
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct 1814 CTAACAACGGAGGAGCCAATGGAACAC-ATAACCGGCGTTTATCTTTGAATGCAAACCAG 1872
Query 1756 AATGGAAGCAGGTCTACTGCAAAAGAAGCAGGGAGAAGGGAGACTCTCAACAGGCCGGCT 1815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1873 AATGGAAGCAGGTCTACTGCAAAAGAAGCAGGGAGAAGGGAGACTCTCAACAGGCCGGCT 1932
Query 1816 GCTCCCACAAACTACGTTGCCATTTCGAAAGAGGAAGCTGCTTCATCACCGGTTTCTAGT 1875
||||| ||||||||||||||||||||||||||||||||||||||||| || |||||| ||
Sbjct 1933 GCTCCTACAAACTACGTTGCCATTTCGAAAGAGGAAGCTGCTTCATCTCCAGTTTCTGGT 1992
Query 1876 GCTGTAGATCATCAAGTTCCAGCTTCACCATGATGATTTGaaaaaatgaaaaaaGATCTG 1935
|||| ||||||||||||||||||||||||||||||| | ||||||||||||| ||| ||
Sbjct 1993 GCTGCAGATCATCAAGTTCCAGCTTCACCATGATGAATA-AAAAAATGAAAAA-GATGTG 2050
Query 1936 TAATTTTCACTGTTTGAGTTTGGTTTAGGAAGAAAAGTCTCTATGAAACACCTGAAAGAA 1995
||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct 2051 TAATTTTCAGTGTTTGAGTT-GGTTTAGGAAGAAAAGGCTCTATGAAACACCTGAAAGAA 2109
Query 1996 GACAAAA-GACATTTGAGAGTAGAATGGTGTACTAGAAtgtgtatgtgtgtgtgt-ttt- 2052
||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2110 GACAAAAAGACATTTGAGAGTAGAATGGTGTACTAGAATGTGTATGTGTGTGTGTGTTTT 2169
Query 2053 gttagtgttgttttGATAGTTG 2074
|||| |||| ||||||||||||
Sbjct 2170 GTTAATGTTATTTTGATAGTTG 2191
Score = 1707 bits (924), Expect = 0.0
Identities = 1003/1041 (96%), Gaps = 5/1041 (0%)
Strand=Plus/Plus
Query 1 GATTTTATCTCACTCTCAATAGTGTGAGTTTTGTTATAGAGAGAGCTTCAGATCTAGAAG 60
||||||||||||||||||||||||| ||| |||| | ||||| |||||||||||||||||
Sbjct 32 GATTTTATCTCACTCTCAATAGTGTTAGTATTGTCACAGAGAAAGCTTCAGATCTAGAAG 91
Query 61 AAGAAGCAGAGTTTATAAGGACAAACCCATTCTAAACCCTTAGAAATCCAGTGTCAATCT 120
||||||||||||| |||| || ||||||||| ||||||| |||||||| |||||||||||
Sbjct 92 AAGAAGCAGAGTTCATAAAGAGAAACCCATTTTAAACCC-TAGAAATCAAGTGTCAATCT 150
Query 121 CGGAAACCTACTGATTTTGCGACAATGGCAGTCACAGATGCTGAAAGTCCTCATCTTGGG 180
||||||||| |||||| || ||||||||||| |||||| ||||||||||||||||||||
Sbjct 151 CGGAAACCTTCTGATTCCGCAACAATGGCAGTTACAGATACTGAAAGTCCTCATCTTGGG 210
Query 181 GAAATTACTTGTGGTACCTTACTTCAGAAGTTGCAGGAAATCTGGGATGAAGTTGGTGAG 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 211 GAAATTACTTGTGGTACCTTACTTGAGAAGTTGCAGGAAATCTGGGATGAAGTTGGTGAG 270
Query 241 AGTGATGA-GCAACGAGACAAACTGCTTCTTCAGATAGAGCAAGAGTGTCTTGATGTTTA 299
|||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 271 AGTGATGATG-AACGAGACAAACTGCTTCTTCAGATAGAGCAAGAGTGTCTTGACGTTTA 329
Query 300 CAAGAGAAAAGTCGAGCAGGCTGCGAAATCCCGAGCTGAGCTTCTTCAAACCTTGTCAGA 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 330 CAAGAGAAAAGTCGAGCAGGCTGCGAAATCCCGAGCTGAGCTTCTTCAAACCTTGTCAGA 389
Query 360 TGCTAATGCTGAACTTTCCAGCCTCACAACT-TCTCTTGGAGAAAAAAGCTTAGTTGGCA 418
||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||
Sbjct 390 TGCTAATGCTGAACTTTCCAGCCTCACAA-TGTCTCTTGGAGACAAAAGCTTAGTTGGCA 448
Query 419 TTCCGGATAAGTCTTCAGGAACGATTAAAGAACAACTTGCTGCTATAGCACCAGCTCTTG 478
||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct 449 TTCCGGATAAGTCTTCAGGAACGATTAAAGAACAACTTGCTGCAATAGCACCGGCTCTTG 508
Query 479 AACAACTGTGGCAACAGAAAGAGGAGAGAGTCCGAGAGTTCTCTGATGTACAATCACAAA 538
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 509 AACAACTGTGGCAACAGAAAGAGGAGAGAGTCCGAGAGTTCTCTGATGTACAATCACAGA 568
Query 539 TTCAGAAGATATGTGGAGAGATTGCTGGAGGTTTGAGCAATGAGGTTCCTATAGTCGATG 598
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 569 TTCAGAAGATATGTGGAGATATTGCTGGAGGTTTGAGCAATGAGGTTCCTATAGTCGATG 628
Query 599 AGTCTGATTTGTCACTGAAAAAATTAGACGATTTCCAGAGCCAACTCCAAGAGCTCCAGA 658
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 629 AGTCTGATTTGTCACTGAAGAAATTAGACGATTTCCAGAGCCAACTCCAAGAGCTCCAGA 688
Query 659 AAGAGAAGAGTGACAGGCTGCACAAGGTGTTAGAGTTTGTGAGTACTGTTCATGATCTAT 718
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 689 AAGAGAAGAGTGACAGGCTGCGCAAGGTGTTAGAGTTTGTGAGTACTGTTCATGATCTAT 748
Query 719 GTGCCGTTCTTGGTTTGGATTTCTTAAGCACCGTCACTGAAGTTCATCCGAGCTTAGATG 778
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 749 GTGCTGTTCTTGGTTTGGATTTCTTAAGCACCGTCACCGAAGTTCATCCGAGCTTAGATG 808
Query 779 AAGAAACCGGTGTCCAGTCTAAGAGCATTAGCAATGAGACACTTTCAAGGTTGGCTAAAA 838
|||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 809 AAGATACCAGTGTCCAGTCTAAGAGCATTAGCAATGAGACTCTTTCAAGGTTGGCTAAAA 868
Query 839 CCGTCTTGACTCTTAAAGATGATAAGAAGCAAAGACTTCAAAAGCTTCAAGAGCTGGCTA 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 869 CCGTCTTGACTCTTAAAGATGATAAGAAGCAAAGACTTCAAAAGCTTCAAGAGCTGGCTA 928
Query 899 CTCAGCTAATTGACCTGTGGAATCTGATGGATACTCCTGATGAGGAAAGGGAACTTTTTG 958
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 929 CTCAGCTAATTGACCTGTGGAATCTGATGGATACTCCTGATGAGGAAAGAGAGCTTTTTG 988
Query 959 ATCATGTTACCTGTAACATTTCATCTTCAGTCGATGAGGTCACTATGCCAGGTGCTCTTG 1018
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 989 ATCATGTTACCTGTAACATTTCATCTTCAGTCGATGAGGTCACTGTGCCAGGTGCTCTTG 1048
Query 1019 CACGTGATTTGATTGAGCAGG 1039
|||||||||||||||||||||
Sbjct 1049 CACGTGATTTGATTGAGCAGG 1069
> AT4G26760.1 | Symbols: MAP65-2 | microtubule-associated protein
65-2 | chr4:13478592-13481808 REVERSE LENGTH=2161
Length=2161
Score = 1609 bits (871), Expect = 0.0
Identities = 1413/1672 (85%), Gaps = 48/1672 (3%)
Strand=Plus/Plus
Query 122 GGAAACCTACTGATTTTGCGACAATGGCAGTCACAGATGCTGAAAGTCCTCATCTTGGGG 181
|||||||| ||| || | | ||||||||| ||||| || |||| ||||| |||||| |
Sbjct 160 GGAAACCTTTTGACTTCACAAGAATGGCAGTGACAGAAGCAGAAAATCCTCTTCTTGGTG 219
Query 182 AAATTACTTGTGGTACCTTACTTCAGAAGTTGCAGGAAATCTGGGATGAAGTTGGTGAGA 241
|||| |||||||| |||||||| |||||||||||||||||||||||||| ||||| ||||
Sbjct 220 AAATCACTTGTGGCACCTTACTACAGAAGTTGCAGGAAATCTGGGATGAGGTTGGGGAGA 279
Query 242 GTGATG-AGCAACGAGACAAACTGCTTCTTCAGATAGAGCAAGAGTGTCTTG-ATGTTTA 299
|||||| || ||||||||||||||||||| ||||| ||| ||||||||| || |||||||
Sbjct 280 GTGATGAAG-AACGAGACAAACTGCTTCTACAGATTGAGGAAGAGTGTC-TGAATGTTTA 337
Query 300 C-AAGAGAAAAGTCGAGC-AGGCTGCGAAATCCCGAGCTGAGCTTCTTCAAACCTTGTCA 357
| || || ||||| |||| | || || ||||| || || ||||||||||| || ||||||
Sbjct 338 CAAAAAG-AAAGTTGAGCTA-GCCGCAAAATCTCGTGCAGAGCTTCTTCAGACTTTGTCA 395
Query 358 GATGCTAATGCTGAACTTTCCAGCCTCACAACTTCTCTTGGAGAAAAAAGCT-TAGTTGG 416
||||| | || ||||||||||| ||||||||| |||| || |||||||||| || | |
Sbjct 396 GATGCCACTGTTGAACTTTCCAATCTCACAACTGCTCTCGGGGAAAAAAGCTATA-TCGA 454
Query 417 CATTCCGGATAAGTCTTCAGGAACGATTAAAGAACAACTTGCTGCTATAGCACCAGCTCT 476
|||||| |||||| ||||||||||||| |||||||||||| |||| |||||||| || ||
Sbjct 455 CATTCCTGATAAGACTTCAGGAACGATCAAAGAACAACTTTCTGCAATAGCACCTGCGCT 514
Query 477 TGAACAACTGTGGCAACAGAAAGAGGAGAGAGTCCGAG-AGTTCTCTGATGTACAATCAC 535
||||||||| ||||||||||||||||| || ||||| | | || ||||||||||||||||
Sbjct 515 TGAACAACTTTGGCAACAGAAAGAGGAAAGGGTCCGGGCA-TTTTCTGATGTACAATCAC 573
Query 536 AAATTCAGAAGATATGTGGA-GAGATTGCTGGAGGTTTGAGCAAT-GAGGTTCCTATAGT 593
| ||||||||||||||| || ||||| ||||| || |||| |||| || || | | ||
Sbjct 574 AGATTCAGAAGATATGT-GAGGAGATCGCTGGCGGATTGAACAATGGA-CCTCATGTGGT 631
Query 594 CGATGAGTCTGATTTGTCACTGAAA-AAATTAGACGATTTCCAGAGCCAACTCCAAGAGC 652
|||||| |||| ||||| || ||| | |||||| || |||||||| ||||||||||||
Sbjct 632 TGATGAGACTGACTTGTCTCT-AAAGAGATTAGATGACTTCCAGAGGAAACTCCAAGAGC 690
Query 653 TCCAGAAAGAGAAGAGTGACAGGCTGCACAAGGTGTTAGAGTTTGTGAGTACTGTTCATG 712
||||||||||||||||||| ||| | || |||||| | ||||||||||| || || ||||
Sbjct 691 TCCAGAAAGAGAAGAGTGATAGGTTACAGAAGGTGCTCGAGTTTGTGAGCACGGTGCATG 750
Query 713 ATCTATGTGCCGTTCTTGGTTTGGATTTCTTAAGCACCGTCACTGAAGTTCATCCGAGCT 772
||||||||||||| ||| |||| |||||||||||||| ||||| ||||||||||||||||
Sbjct 751 ATCTATGTGCCGTCCTTCGTTTAGATTTCTTAAGCACTGTCACCGAAGTTCATCCGAGCT 810
Query 773 TAGATGAAG-AAACCGGTGTCCAGTCTAAGAGCATTAGCAATGAGACACTTTCAAGGTTG 831
||||||| | ||| ||||| || | ||||||||||||||||| |||||| ||||||||
Sbjct 811 TAGATGAGGCAAA-TGGTGTTCAAACCAAGAGCATTAGCAATGAAACACTTGCAAGGTTG 869
Query 832 GCTAAAACCGTCTTGACTCTTAAAGATGATAAGAA-GCAAAGACTTCAA-AAGCTTCAAG 889
||||| || ||||||||||||||||| ||||| || |||||||||| || ||||||||||
Sbjct 870 GCTAAGACTGTCTTGACTCTTAAAGAAGATAA-AATGCAAAGACTT-AAGAAGCTTCAAG 927
Query 890 AGCTGGCTACTCAGCTAATTGACCTGTGGAATCTGATGGATACTCCTGATGAGGAAAGGG 949
| || ||||||||||||| ||| || |||||||||||||||||| |||||||||||||||
Sbjct 928 AACTAGCTACTCAGCTAACTGATCTATGGAATCTGATGGATACTTCTGATGAGGAAAGGG 987
Query 950 AACTTTTTGATCATGTTACCTGTAACATTTCATCTTCAG-TCGATGAGGTCACTATG-C- 1006
| |||||||| |||||||||| |||||||||| |||||| || |||| || || || |
Sbjct 988 AGCTTTTTGACCATGTTACCTCTAACATTTCAGCTTCAGTTC-ATGAAGTGAC--TGCCT 1044
Query 1007 CAGGTGCTCTTGCACGTGAT-TTGATTGAGCAGGCTGAGGTGGAAGTGGATAGGCTTGAC 1065
| |||||||| |||| |||| || || || |||||||||||||||||||||||||||||
Sbjct 1045 CTGGTGCTCTCGCACTTGATCTT-ATCGAACAGGCTGAGGTGGAAGTGGATAGGCTTGAT 1103
Query 1066 CAGCTTAAAGCTAGCCGAATGAAGGAAATTGCGTTCAAGAAGCAATCTGAGCTTGAAGAG 1125
|| || ||| ||||| |||||||||||||||| ||||| |||||||| |||||||| |||
Sbjct 1104 CAACTGAAATCTAGCAGAATGAAGGAAATTGCATTCAAAAAGCAATCAGAGCTTGAGGAG 1163
Query 1126 ATATATGCTCGTGCCCATGTAGAAATAAACCCGGA-ATCTGCTCGTGAGAGAATCATGTC 1184
|||||||||||||| || |||||||||| || || | || ||||||||| ||||||||
Sbjct 1164 ATATATGCTCGTGCTCACATAGAAATAAAACCAGAGGT-TGTTCGTGAGAGGATCATGTC 1222
Query 1185 GCTGATTGATTCT-GGAA-ACGTTGAGCCTACTGAATTATTGGCAGACATGGATAGCCAG 1242
| |||||||| || |||| || ||| |||||||| ||| |||| |||||||||||||||
Sbjct 1223 GTTGATTGATGCTGGGAATAC--TGAACCTACTGAGTTACTGGCTGACATGGATAGCCAG 1280
Query 1243 ATAGCAAAGGCTAAGGAAGAAGCATTTAGTAGAAAAGATATATTGGACCGAGTCGAGAAA 1302
|| |||||||| ||||| ||||| |||||||||||||| || || ||||| || ||||||
Sbjct 1281 ATCGCAAAGGCCAAGGAGGAAGCCTTTAGTAGAAAAGAAATTTTAGACCGTGTAGAGAAA 1340
Query 1303 TGGATGTCAGCTTGTGAGGAAGAGAGCTGGCTAGAAGACTACAATCGGGATCAGAACAGG 1362
|||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||
Sbjct 1341 TGGATGTCAGCTTGTGAGGAAGAGAGCTGGCTCGAAGATTACAATCGAGATCAGAACAGG 1400
Query 1363 TACAGTGCAAGCAGAGGCGCACACTTGAATCTCAAGAGAGCTGAGAAAGCTCGGATTCTG 1422
|| ||||||||| |||| || || ||||||||||||||||||||||||||||||||||||
Sbjct 1401 TATAGTGCAAGCCGAGGTGCGCATTTGAATCTCAAGAGAGCTGAGAAAGCTCGGATTCTG 1460
Query 1423 GTTAGCAAGATTCCTGCCATGGTTGACACATTGGTTGCCAAGACCCGGGCGTGGGAAGAG 1482
|| ||||||||| |||| ||||||||||| ||| |||| || |||||||| |||||||||
Sbjct 1461 GTCAGCAAGATTACTGCTATGGTTGACACGTTGATTGCTAAAACCCGGGCATGGGAAGAG 1520
Query 1483 GA-ACACAGCATGTCCTTTGCCTACGATGGTGTTCCTCTGCTAGCAATGCTAGACGAGTA 1541
|| | |||| |||||||||| |||||||| |||||| | || || |||||||| || ||
Sbjct 1521 GAGA-ACAGTATGTCCTTTGAGTACGATGGAGTTCCTTTACTCGCCATGCTAGATGAATA 1579
Query 1542 TGGTATGCTTAGGCAAGAACGAGAAGAGGAGAAACGGAGGCTGAGGGAACAAAAGAAGGT 1601
|||||||||||||||||||||||| ||||| |||||||||| ||||| ||||||
Sbjct 1580 CACTATGCTTAGGCAAGAACGAGAAGATGAGAAGCGGAGGCTGAAAGAACAGAAGAAGCA 1639
Query 1602 TCAAGAACAGCCACACATAGAGCAAGACTCTGCCTTTAGCACCAGGCCAAGCCCTGCTAG 1661
|||||||||||||||| ||| ||||| || |||||| | | | ||||||||||| ||
Sbjct 1640 GCAAGAACAGCCACACACAGATCAAGAATCCGCCTTTGGGTCTAAACCAAGCCCTGCAAG 1699
Query 1662 ACCGGTCAGTGCTAAGAAAACGGTGGGGCCACGAGCTAACAACGGAGGAG--C-CAATGG 1718
||| || ||||| |||||| ||||||| |||||| | ||| ||||||| | ||| |
Sbjct 1700 ACCCGTTAGTGCCAAGAAACCGGTGGGAACACGAG-T--CAATGGAGGAGGGCTCAACGA 1756
Query 1719 AACACCAAACCGGCGTTTATCTTTGAA-TGCAAACCAGAATGGAAGCAGGTC 1769
||| || | ||||||| ||| |||| | |||||||||| ||||||| |||
Sbjct 1757 AACTCCTATGAGGCGTTTGTCTATGAACT-CAAACCAGAACGGAAGCAAGTC 1807
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 105471345045
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5