BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg495619
Length=1057
Score E
Sequences producing significant alignments: (Bits) Value
AT5G55340.1 | Symbols: | MBOAT (membrane bound O-acyl transfer... 1548 0.0
AT5G55360.1 | Symbols: | MBOAT (membrane bound O-acyl transfer... 580 7e-165
> AT5G55340.1 | Symbols: | MBOAT (membrane bound O-acyl transferase)
family protein | chr5:22439851-22441005 REVERSE LENGTH=1155
Length=1155
Score = 1548 bits (838), Expect = 0.0
Identities = 988/1060 (93%), Gaps = 12/1060 (1%)
Strand=Plus/Plus
Query 1 ACAAACAAAGATCTGAGAGATGGATGAAGAACTCAAGAACTTGATCAAAGTATGGTTTTC 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1 ACAAACAAAGATCTGAGAGATGGATGAAGAACTCAAGAACTTGATCAAAGTATGGGTTTC 60
Query 61 AGCAATAATCTCGATATCTTATTGTTACTACTTACCACCTAGAATCAAATCTGGTgttcc 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct 61 TGCAATAATCTCGATATCTTATTGTTACTACATACCACCTAGAATCAAATCTGGTGCTCC 120
Query 121 tcgattcctctctgtttcccctgttcttgctctgtttcttgttcttcctctgtttttctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 TCGATTCCTCTCTGTTTCCCCTGTTCTTGCTCTGTTTCTTGTTCTTCCTCTGTTTTTCTC 180
Query 181 ctctctgCATTTATCTTTAATCACAGCGTTTTTCCTCACATGGCTTGCTAATTTCAAACT 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 CTCTCTGCATTTATCTTTAATCACAGCGTTTTTCCTCACATGGCTTGCTAATTTCAAACT 240
Query 241 CATCCTCTTCTCCTTCGATAAAGGTCCTTTAATCCCAATTCCGACCAATCTCTCTCGATT 300
|||||||||||||||||||||||||||||||||||||||||| || ||| || |||||||
Sbjct 241 CATCCTCTTCTCCTTCGATAAAGGTCCTTTAATCCCAATTCCAACAAATTTCCCTCGATT 300
Query 301 CTTCTGCTTCACTTGCTTCCCCATCAATGTTCAGCAAAACCCTAAATCTCAAAACCATTT 360
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 301 CTTCTGCTTCACTTGCTTCCCCATCAAGGTTCAGCAAAACCCTAAATCTCAAAACCATTT 360
Query 361 GCCTAAATTGGTTTTCGCCATTAAAGTTGCAATCTTTGGTGTGTTGTTACATTTGTATGG 420
||| ||||||||||||||||||||| |||||||||||| ||| | |||||||||||| |
Sbjct 361 GCCCAAATTGGTTTTCGCCATTAAACTTGCAATCTTTGCAGTGCTATTACATTTGTATAG 420
Query 421 TTACAGACAAAATCTGTCTCCGACTGTACTACTAGGTCTCTATTTTGTGCATCTATACTT 480
|||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||
Sbjct 421 CTACAGACAAAATCTGTCTCCGACTATACTATTAGGTCTCTATTTTGTGCATCTCTACTT 480
Query 481 AGAGATTGAGATTATTTTAACGTTCGTTAAAGTTGTTGTTTTTATCTCTCTTGGCTGCGA 540
||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 481 AGAGATTGAGATTATATTAACGTTTGTTAAAGTTGTTGTTTTTATCTCTCTTGGCTGCGA 540
Query 541 TCTTGAACCACAGTCCAATAAACCATACTTAGCCACATCTCTACAAGACTTTTGGGGTCG 600
|||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct 541 TCTTGAGCCACAGTCCAATAAACCGTACTTAGCCACATCTCTACAAGACTTCTGGGGTCG 600
Query 601 TCGGTGGAATCTTATGGTTCCGGCGATTCTCCGTCCAGCAGTTTACGCTCCAATGCGGCG 660
||||||||||| |||||||||||||||||||| ||||| |||||||| |||||||||||
Sbjct 601 CCGGTGGAATCTCATGGTTCCGGCGATTCTCCGGCCAGCCGTTTACGCACCAATGCGGCG 660
Query 661 AGTCTCTGAACGCAAAATGAGTTCCGGGTGGGCTCTGTTTCCGGGGATTTTAGCGGCGTT 720
||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||
Sbjct 661 AGTCTCTGAACGCAAAATGAGTTCCGGTTGGGCTCTGTTTCCGGGGATTTTGGCAGCGTT 720
Query 721 CATCGTATCTGGTTTGGTTCATGAATTGCTCTTCTTCTATATGATACGTGAGATGCCCAC 780
||||| || ||||||||||| |||||||||||||||||| |||||||||||||||| ||
Sbjct 721 TATCGTCTCCGGTTTGGTTCACGAATTGCTCTTCTTCTATTTGATACGTGAGATGCCTAC 780
Query 781 TGGAGAAGTTACTCTGTTCTTTGTGTTACATGGCGTATGTACTGCGGCT-GAATTGGCGG 839
||||||||||||||||||||||||||||||||||| |||||||| | | ||||||||||
Sbjct 781 AGGAGAAGTTACTCTGTTCTTTGTGTTACATGGCGTTTGTACTGCTG-TAGAATTGGCGG 839
Query 840 TTAAGAAGAAGACAACGGTGATGCA--GCGGTGGAGGTTAAGTCCGGCGGTTTCGCGGCT 897
| |||||||| || ||||| | ||| ||||||| |||| ||||||| ||| |||||| |
Sbjct 840 TGAAGAAGAAAACGACGGT-A-GCACAGCGGTGGCGGTTGAGTCCGGGGGTGTCGCGGGT 897
Query 898 GATTACGGTGGGGTTTGTGTTTGTGAGTGGTGGTTGGTTGTTTACACCTCAGCTTAAAAG 957
| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 898 TCTCACGGTGGGGTTTGTGTTTGTGACTGGTGGTTGGTTGTTTACACCTCAGCTTAAAAG 957
Query 958 GAGCGGCGTGATGGAGAGATTCACATATGAAGCTGTGTTGTTCGTTGAGTTCGTTAAGCA 1017
|||||| ||||||||||||||||||| ||||||||||||| ||||||||||| ||||||
Sbjct 958 GAGCGGGGTGATGGAGAGATTCACATCTGAAGCTGTGTTGCTCGTTGAGTTCATTAAGC- 1016
Query 1018 CAAGTTATAAGTTATTTTAGTTACTTTGTTGGGGATATTT 1057
| ||||||||||||| |||| |||||||||||||||
Sbjct 1017 ---G--ATAAGTTATTTTATTTACGTTGTTGGGGATATTT 1051
> AT5G55360.1 | Symbols: | MBOAT (membrane bound O-acyl transferase)
family protein | chr5:22443724-22444752 REVERSE LENGTH=1029
Length=1029
Score = 580 bits (314), Expect = 7e-165
Identities = 808/1038 (78%), Gaps = 68/1038 (7%)
Strand=Plus/Plus
Query 20 ATGGATGAAGAACTCAAGAACTTGATCAAAG-TATGGTTTTCAGCAATAATCTCGATATC 78
||||| ||||||||||||||||| ||| ||| | ||| |||||||||||||||| |||||
Sbjct 1 ATGGAAGAAGAACTCAAGAACTTCATC-AAGCTTTGGATTTCAGCAATAATCTCCATATC 59
Query 79 TTATTGTTACTACTTACCACCTA-GAATCAAATCTGGTgttcctcgattcctctctgttt 137
||| |||||||||||| || | | |||||||| |||||||| |||||| ||||||| ||
Sbjct 60 TTACTGTTACTACTTATCAAC-AGGAATCAAAGCTGGTGTTTTTCGATTACTCTCTG-TT 117
Query 138 c-ccctgttct-tgctctgtttcttgttcttcctctgtttttctcctctctgCATTTATC 195
| |||| | | |||||||||||||||| |||||||||||||||||| | | || || ||
Sbjct 118 CTTCCTG-TATGTGCTCTGTTTCTTGTTTTTCCTCTGTTTTTCTCCTATGTTCACTTCTC 176
Query 196 TTTAAT-CACAGCGTTTTTCCTCACATGGCTTGCTAATTTCAAACTCATCCTCTTCTCCT 254
| | || || ||||||||| ||||||| || |||||||||||||||||||||||||
Sbjct 177 -TGGTTGCATGGCTTTTTTCCTCTCATGGCTCGCAAATTTCAAACTCATCCTCTTCTCCT 235
Query 255 TCGATAAAGGTCCT-TTAATCCCAA-TTCCGACCAA-TCTCTCTCGATTCTTCTGCTTCA 311
||||| |||||||| || |||| | |||| | || |||||| |||||| | ||| |||
Sbjct 236 TCGATCAAGGTCCTCTT--TCCCCACTTCCT-CGAACTCTCTCCCGATTCATATGCATCA 292
Query 312 CTTGCTTCCCCATCAATGT-TCAGCAAAACCCTAA-ATCTCAAAACCATT---TGCCTAA 366
|||||||||||||||| | ||| ||||||||||| || |||||| || | || |
Sbjct 293 CTTGCTTCCCCATCAA-GCCTCAACAAAACCCTAATAT-TCAAAATTATAAAATCCCCAT 350
Query 367 ATTGG-TTTTCGCCATTAAAGTTG-CAATCTTTGGTGTGTTGTTACATTTGTATGGTTAC 424
|| || |||||||||||||||||| || |||||| ||| |||||||| |||||| |||
Sbjct 351 AT-GGCTTTTCGCCATTAAAGTTGTCA-TCTTTGTTGTCTTGTTACAAATGTATGAATAC 408
Query 425 AGACAAAATCTGTCTCCGACTGTACTACTAGGTCTCTATTT-TGTGCATCTATACTTAGA 483
| |||| ||||||||||| || || || | ||| | || || | | ||| ||| ||| ||
Sbjct 409 AAACAATATCTGTCTCCGGCTTTATTATT-GGTTTTTAATTCTCTACATATATTCTTGGA 467
Query 484 GATTGAGATTAT-TTTAACGTTCGTTAAAGTTGTTGTT-TTTATCTCTCTTGGCTGCGAT 541
| |||||||| | |||| | |||| |||| ||| | |||||| ||||||||||||||
Sbjct 468 GCTTGAGATTGTCTTTAT-GCTCGTCAAAGCA-TTGGTCTTTATCACTCTTGGCTGCGAT 525
Query 542 CTTGAACCACAGTCCAATAAACCATACTTAGCCACATCTCTACAAGACTTTTGGGGTCGT 601
|| || |||||||||||| |||||||||||||||| ||||| |||||||| |||||||||
Sbjct 526 CTAGAGCCACAGTCCAATGAACCATACTTAGCCACTTCTCTTCAAGACTTCTGGGGTCGT 585
Query 602 CGGTGGAATCTTATGGTTCCGGCGATTCTCCGTCCAGCAGTTTACGCTCCAATGCG-G-C 659
|||||||| || ||||| |||||||||||||| || || || ||| |||| ||| | |
Sbjct 586 CGGTGGAACCTCATGGTCCCGGCGATTCTCCGGCCGGCTGTCTAC-CTCCCG-GCGAGAC 643
Query 660 GAGTCTC-TGAACGCAAAATGAGTTCCGGGTG-GGCTCTGTTTCCGGGGA-TTTTAGCGG 716
|| | | || || ||| | | |||| | |||| |||| | |||| |||| || |
Sbjct 644 GAATGGCCTGT-CGGAAAGTTAACTCCGA-TCAGGCTATGTT-CTTGGGAGTTTTCGCAG 700
Query 717 CGTT-CATCGTATCTGGTTTGGTTCATGA-ATTGCTCTTCTTCTATATGATACGTGAGAT 774
|||| | |||| || ||| ||||||||| || ||||||||||||| | | |||||| |
Sbjct 701 CGTTTC-TCGTCTCCGGTGCGGTTCATGAGAT-GCTCTTCTTCTATCTTACCCGTGAGGT 758
Query 775 GCCCACTGGAGAAGTTACTCTG-TTCTTTGTGTTACATGGCGTATGTACTGCGGCTGAAT 833
|| || || ||||| ||| || |||||| |||||||||| || || || | ||| |||
Sbjct 759 TCCTACAGGGGAAGTCACT-TGGTTCTTTTTGTTACATGGAGTTTGCACGGTGGCGGAAG 817
Query 834 TGGCGGTTAAGAAGAAG-ACAACGGTGATGC-AGCGGTGGAG-GTTAAGTCCGGCGGTTT 890
||||||| ||||||| | ||| ||| || | ||||||| || | ||||| |||| |
Sbjct 818 TGGCGGTGAAGAAGA-GTACATTTGTGCGGCGAT-GGTGGAGAGTGA-GTCCGACGGTGT 874
Query 891 CGCGGCTGATTACGGTGGGGTTTGT-GTTTGTGA-GTGGTGGTTGGTTGTTTA-CACCTC 947
| || || | ||||| || ||||| ||| |||| | | ||||||||| ||| | ||||
Sbjct 875 CACGTCTTCTGACGGTCGGTTTTGTTGTT-GTGACGAG-TGGTTGGTTCTTTTTC-CCTC 931
Query 948 AGCTTAAAAGGAGCGGCGTGATGGAGAGATTCACATAT-GAAGC-TGTGTTGTTCGTTGA 1005
||| |||||| ||| | || || ||| || | || ||||| | | ||| | ||||
Sbjct 932 ---TTATAAGGAGTGGCATCATCGAAAGACTCGC-TAGCGAAGCCT-TAATGTGCATTGA 986
Query 1006 GTTCGTTAAGCACAAGTT 1023
||||| |||||||||||
Sbjct 987 TTTCGTCAAGCACAAGTT 1004
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 51841639704
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5