BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg495621
Length=1244
Score E
Sequences producing significant alignments: (Bits) Value
AT5G55380.1 | Symbols: | MBOAT (membrane bound O-acyl transfer... 1744 0.0
AT5G55370.1 | Symbols: | MBOAT (membrane bound O-acyl transfer... 488 5e-137
> AT5G55380.1 | Symbols: | MBOAT (membrane bound O-acyl transferase)
family protein | chr5:22446624-22447898 REVERSE LENGTH=1275
Length=1275
Score = 1744 bits (944), Expect = 0.0
Identities = 1152/1247 (92%), Gaps = 35/1247 (3%)
Strand=Plus/Plus
Query 1 CGACAGATCTGAGATATGGAAGAAAAGTTTAGAAACTTAATCGAGGTATGGATCTCTGCT 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 13 CGACAGATCTGAGAAATGGAAGAAAAGTTTAGAAACTTAATCGAGGTATGGATCTCTGCT 72
Query 61 CTAATCTCTCTATCTTACTGTTATTACATATCATCTAAACTCTCCAAAGGTGTTCTTCGT 120
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 73 TTAATCTCTCTATCTTACTGTTATTACATATCGTCTAAACTCTCCAAAGGTGTTCTTCGT 132
Query 121 CTCCTCTCTATTCTTCCAATCTGCATTCTGTTTTTTGTTCTTCCTCTGTTCCTCTCTTGT 180
|||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct 133 CTCCTCTCTATTCTTCCAGTCTGCATTCTGTTTCTTGTTCTTCCTCTGTTCCTCTCTTGT 192
Query 181 GTGCACTGTTGCGCCATTTCAGCTCTTTTTCTCTCATGGCTTGCAAACTTCAAGCTTCTT 240
||||||| |||||||||||||| ||||||||| ||||||||||||||||| |||||||||
Sbjct 193 GTGCACTTTTGCGCCATTTCAGTTCTTTTTCTTTCATGGCTTGCAAACTTTAAGCTTCTT 252
Query 241 CTCTTTGCCTTTGATGAAGGACCTTTGTTCCCACTTCCCCCAAAACTCTCCCGTTTCATC 300
|| |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct 253 CTATTTGCCTTTGATGAGGGACCTTTGTTCCCACTTCCTCCAAAACTCTCCCGTTTCATC 312
Query 301 TGCTTCGCTTGTTTGCCCATCAAAATCAGACATA-ACCCTTCTCCAAATGCGATCA-CAA 358
|||||||||||||| ||||||||||||||||| | ||||||||||||||||||| | |||
Sbjct 313 TGCTTCGCTTGTTTACCCATCAAAATCAGACA-AGACCCTTCTCCAAATGCGAT-ACCAA 370
Query 359 ATCTTCATCTTCGTAAGCATGAACCTATGCCTAAATGGGTTTTGGCTGTCAAAATTTTGG 418
||||||||| | | | |||||||||||||||||||||||||||| ||||||||||
Sbjct 371 ATCTTCATC--C-T----A--AACCTATGCCTAAATGGGTTTTGGCTGTTAAAATTTTGG 421
Query 419 TCTTGGGCGTCTTGTTACATGTCTATGAATACAGGGATGGTTTGCCTCGGTTCGTTGTCT 478
|||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 422 TCTTGGGCGTCTTGTTACATGTTTATGAATACAGGGATGGTTTGCCTCGGTTTGTTGTCT 481
Query 479 TGGCTCTCTATTGTCTCCATATATACCTTGAGGTAGAACTTGTCTTGGTGTTTGTTGGGG 538
|||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |
Sbjct 482 TGGCTCTCTATTGTCTCCATATTTACCTTGAGGTAGAACTTGTCTTGGTCTTTGTTGGAG 541
Query 539 CTGTGGTATCTACTCTTCTTGGGTGTAACATCGAGCCAGTGTTCAATGAGCCCTACCTAG 598
| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 542 CCGTGGTATCTACTCTTCTTGGGTGTAACATCGAGCCGGTGTTCAATGAGCCCTACCTAG 601
Query 599 CTACCTCTCTACAGGACTTCTGGAGCCGCAGATGGAACCTCATGGTTTCAGCTGTCCTAC 658
||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 602 CTACCTCCCTACAAGACTTCTGGAGCCGCAGATGGAACCTCATGGTTTCAGCCGTCCTAC 661
Query 659 GCTCAACTGTCCACATTCCCGTTCAGCGTTTTTTCAAACGCTTGCTCAGTCCAAACGGGG 718
||||||| || |||||||| ||||||||||||||||||||| | ||||||||| ||||||
Sbjct 662 GCTCAACCGTTCACATTCCGGTTCAGCGTTTTTTCAAACGCATACTCAGTCCAGACGGGG 721
Query 719 CTATGTTTGCTGGGGTCATGGCCTCGTTCTTTGTCTCGGGCTTGATGCATGAGCTGCTCT 778
|||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct 722 CTATGTTTGCTGGGGTCATGGCATCGTTCTTTGTCTCAGGCTTGATGCATGAGCTGCTCT 781
Query 779 ACTTCTACATGATCCGTAAGCCGCCAACTTGGGAAGTCACTTGTTTCTTTGTGTTGCATG 838
|||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 782 ACTTTTACATGATCCGTAAGCCTCCAACTTGGGAAGTCACTTGTTTCTTTGTGTTGCATG 841
Query 839 GTGCTGCCACTGCCACTGAGATAGGGGTGAAGAGAACACAATGGTGGAGGCCACCGCACC 898
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 842 GTGCTGCCACTGCCACTGAGATAGCGGTGAAGAGAACACAATGGTTGAGGCCACCGCACC 901
Query 899 GGGCTGTCTCCGGTCTTGCAGCTCTGACGTTTGTGAGTGTGACGGGCGTTTGGCTATTCC 958
|||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct 902 GGGCTGTCTCTGGTCTTGTAGTTCTGACGTTTGTGAGTGTGACGGGCGTTTGGCTATTCC 961
Query 959 TCCCTCAAGTGCTGAGAAACAATGTCCATGAGAAAGCGATTAGTGAATGTTTATTGGTTC 1018
|| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct 962 TCGCTCAAGTGCTGAGAAACAATGTCCATGAGAAAGCGATTGGAGAATGTTTATTGGTTC 1021
Query 1019 TTGACCTTGTCAAACGCAAGTTATTCACTTCGTCATGATTCTTTATTAAAGGCCAAGAGC 1078
||||||| | | | |||||||||||||| ||||||||||||||||||||| ||||||
Sbjct 1022 TTGACCTAG-C---C--AAGTTATTCACTTCTTCATGATTCTTTATTAAAGGCAAAGAGC 1075
Query 1079 AGTAGCAGAGCAACCAAACTTATTACTTTATTAGTGTCTCTTCATTGTGTGAAAACGTAT 1138
|||||||||||||||||||| | ||| ||||||||||| |||||||||||
Sbjct 1076 GGTAGCAGAGCAACCAAACTT-TG--TTT--------CTCTTCATTGTTTGAAAACGTAT 1124
Query 1139 ATAGAAGTGTGAGACACGTTGGGTGGTGTGAGACATTCATT-ACATGGAACTAAATTGAA 1197
||||||||||||||||||| | | |||||| |||||| || ||||| | |||||||||
Sbjct 1125 ATAGAAGTGTGAGACACGTCGTCTAGTGTGAAACATTC-TTGACATGCTATTAAATTGAA 1183
Query 1198 TCAAGCGCAACAAtttttttATAAAATATGGCGTAAATGTTTTCTAA 1244
|||||| |||||| || ||||| |||||||||||||||||||||
Sbjct 1184 TCAAGCTCAACAAATTCA--ATAAA-TATGGCGTAAATGTTTTCTAA 1227
> AT5G55370.1 | Symbols: | MBOAT (membrane bound O-acyl transferase)
family protein | chr5:22445085-22446116 REVERSE LENGTH=1032
Length=1032
Score = 488 bits (264), Expect = 5e-137
Identities = 805/1054 (76%), Gaps = 86/1054 (8%)
Strand=Plus/Plus
Query 16 ATGGAAGAAAAGTTTAGAAACTTAATCGAGGTATGGATCTCTG-CTCTAATCTCTC-TAT 73
||||||||| |||| |||||| ||||| |||| |||||||||| || ||||||| | |||
Sbjct 1 ATGGAAGAAGAGTTGAGAAACCTAATCAAGGTTTGGATCTCTGCCT-TAATCTC-CATAT 58
Query 74 CTTACTGTTATTACATATCATCTAAACTCTCCAAAGGTGTTCTTCGTCTCCTCTCTATTC 133
|||||||||| ||||| ||||| ||| ||||||||||||||||||||||||||||| |||
Sbjct 59 CTTACTGTTACTACATCTCATCAAAAATCTCCAAAGGTGTTCTTCGTCTCCTCTCTCTTC 118
Query 134 TTCCAATCTGCATTC-TGTTTTTTGTTCTTCCTCTGTTCCTCTCTTGTGTGCACTGT-TG 191
|||| |||| ||| | | ||| || |||||||||| ||| |||||| ||| |||| | ||
Sbjct 119 TTCCCATCTTCAT-CATCTTTCTTCTTCTTCCTCTCTTCTTCTCTTCTGTCCACT-TCTG 176
Query 192 CGCCATTTCAGCTCTTTTTCT-CTCATGGCTTGCAAACTTCAAGCTTCTT-CTCTTTGCC 249
|| ||| |||| | || |||| | ||||||| ||||| |||||||| ||| ||||||||
Sbjct 177 CGTCATCTCAGGT-TTCTTCTTCACATGGCTCGCAAATTTCAAGCT-CTTTCTCTTTGC- 233
Query 250 TTT-GATGAAGGACCTTTGTTCCCACTTCCCCCAAAACTCTCCCGTTTCATCTGCTTCGC 308
||| ||| ||| |||||| |||||||||| |||| ||| |||||||| ||||||||||
Sbjct 234 TTTCGATCAAGAACCTTTAAGCCCACTTCCCTCAAATCTCACCCGTTTCTTCTGCTTCGC 293
Query 309 TTGTTTGCCCATCAAAATCAGACATAA-CCCTTCTCCAAATGCGATCACAAATCTTCATC 367
|||||| ||||||||||||| | | || ||||||| ||||| ||| | || || |
Sbjct 294 TTGTTTCCCCATCAAAATCA-ATAAAAACCCTTCTTCAAAT-CGA--A----TC--CA-C 342
Query 368 TTCGTAAGCATGAACCTATGCCTAAATGGGTT-TTGGCTGTCAAAATTTTGGTCTTGGGC 426
|| || |||||||| |||||||||| ||| || ||||| ||||| |||| |
Sbjct 343 -----AA-CA--AACCTATGTCTAAATGGGTCCTTG-CTTTCAAACTTTTGATCTTTTCC 393
Query 427 GTCTTGTTACATGTCTAT-GAAT-A-C-AGGGAT---GGTTTGCCTCGGTTCG-TTGTCT 478
|||| |||||||| ||| ||| | | | | || ||||| | ||||||| || |||
Sbjct 394 TTCTTATTACATGTGTATAGAAACAACTATG-ATTCCGGTTTATCACGGTTCGCTT-TCT 451
Query 479 TGGCTCTCTATTGTC-TCCATATATACCTTGAGGTAGAACTTGTCTTGGTGTTTGTTGGG 537
||||||||| || | | ||| | ||||| |||| ||||||| |||| || || || ||
Sbjct 452 TGGCTCTCT-TTACCATTCATGTTTACCTCGAGGCAGAACTTATCTTAGTCTTCGTCGGT 510
Query 538 GC-TGTGGTATCTACT-CTTCTTGGGTGT-AACATCGAGCCAGTGTTCAATGAGCCCTAC 594
|| | || | |||| | |||||||| ||| || || || || || |||||||| || |||
Sbjct 511 GCCT-TGATGTCTA-TGCTTCTTGGTTGTGAA-ATGGAACCGGTATTCAATGATCCTTAC 567
Query 595 CTAGCTACCTCTCTACAGGACTTCTGGAGCCGCAGATGGAACCTCATGGTTTCAGCTGTC 654
|||| || ||| |||| || || |||||||| ||||||||||||||||| |||| ||
Sbjct 568 TTAGCCACTTCTTTACAAGAGTTTTGGAGCCGTAGATGGAACCTCATGGTCCCAGCCGTA 627
Query 655 CTACGCTCAA-CTGTCCACATTCCCGTTCAGCGTTTTT-T-CAAACGCTTGCTCAGTCCA 711
|| || || | | |||||||| || |||||||| |||| | || || || ||| ||| |
Sbjct 628 CTCCG-TCCAGCCGTCCACATACCGGTTCAGCGATTTTGTGCAC-CG-TTACTCGGTCTA 684
Query 712 AACGGGGCTATGTTT--GCTGGGGTCATGGCCTCGTTCT-TTGTCTCGGGCTTGATGCAT 768
|| ||||| | ||| ||||| | | ||| |||| | ||||||| || || ||||||
Sbjct 685 CACCGGGCT-T-TTTACGCTGGAATGTTAGCCACGTT-TATTGTCTCTGGTTTAATGCAT 741
Query 769 GAGCTGCTCTACTTCTACATGATCCGTAAGCCGCCAACTTGGGAAGTCACTTGTTTCTTT 828
|||||| | ||||| || | ||||| || | |||||||||||||||||||| ||||||
Sbjct 742 GAGCTGATTTACTTTTATGTTATCCGCAAATCTCCAACTTGGGAAGTCACTTGCTTCTTT 801
Query 829 GTGTTGCATGGTGCTGCCACT-GCC-ACTGAGATAGGGGTGAAGAGAACACAATGGTGGA 886
| |||||||| | || ||| ||| | ||||||| | ||||||| | | |||||
Sbjct 802 CTTTTGCATGGAGTTGTAACTTGCCTA--GAGATAGCGATGAAGAGGATGC---GGTGGC 856
Query 887 GGCC-ACCGC-AC--CGGGCTGTCTCCGGTCTTGCAGCT-CTGACGTTTGTGAGT-GTGA 940
|| || || || ||||| ||||| ||||||||| | | | |||| || | || |
Sbjct 857 TTCCTAC-GCCACGTCGGGCGGTCTCGGGTCTTGCAATTACGGT-GTTTTTGC-TCGTTA 913
Query 941 CGGGC-GTTTGGCTATTCCT-CCCTCAAGTGCTGAGAAACAATGTCCATGAGAAAGCGAT 998
| | | | |||| | || | ||||||| || | ||||| |||| ||| ||| || |||
Sbjct 914 CAG-CTGGTTGGTTGTTT-TACCCTCAAATGTTAAGAAATGATGTGCATAAGAGAGTGAT 971
Query 999 TAGTGAATGTTTATTGGTTCTTGACCTTGTCAAA 1032
||||||||||| |||||| ||||| |||| |||
Sbjct 972 AAGTGAATGTTTGTTGGTTATTGACGTTGTTAAA 1005
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 61144263810
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5