BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg495653
Length=2798
Score E
Sequences producing significant alignments: (Bits) Value
AT5G55660.1 | Symbols: | DEK domain-containing chromatin assoc... 3611 0.0
AT4G26630.1 | Symbols: | DEK domain-containing chromatin assoc... 1029 0.0
> AT5G55660.1 | Symbols: | DEK domain-containing chromatin associated
protein | chr5:22538613-22543474 FORWARD LENGTH=2830
Length=2830
Score = 3611 bits (1955), Expect = 0.0
Identities = 2590/2870 (90%), Gaps = 150/2870 (5%)
Strand=Plus/Plus
Query 1 GAAAGAGATCGGAGCGTTGGTA----TTATTT-GT-TCTGATTCGAACGGAATAAATAAG 54
|||||||||||||||||||||| || ||| | |||||||||||| |||||||||||
Sbjct 1 GAAAGAGATCGGAGCGTTGGTATCCCTTTTTTCTTCTCTGATTCGAACAGAATAAATAAG 60
Query 55 AACCCC-aaaaaaaaaaaaGCTCAGTGCTTTGAAGCCTTTGGATAGCGAAGCGTTCTGGT 113
|||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 61 AACCCCAAAAAAAAAAAAAGCTCACTGCTTTGAAGCCTTTGGATAGCGAAGCGTTCTGGT 120
Query 114 GTTTT-TGGCTTTAAGATCTACTGAACACT-GG-GTGAGCAATGGGGGAAGAAGATACAA 170
||||| |||||||||||||||||||||| | || ||||||||||||||||||||||||||
Sbjct 121 GTTTTCTGGCTTTAAGATCTACTGAACATTGGGTGTGAGCAATGGGGGAAGAAGATACAA 180
Query 171 AAGTCACTGTGGAGCCAACGGCAAATGGGACTAGCTCTCTTCAAAAGACATCAGATGCTA 230
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 181 AAGTCATTGTGGAGCCAACGGCAAATGGGACTAGCTCTCTTCAAAAGACATCAGATGCAA 240
Query 231 TCAGTGGAAAGGAAGTGCTGGAGAATGCTAGTGGCAAGGAAACACAGGAAAGTAAGAAAG 290
|||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||
Sbjct 241 TCAGTGGAAAGGAAGTGCAGGAGAATGCTAGTGGCAAGGAAGTGCAGGAGAGTAAGAAAG 300
Query 291 ACGAGGATACTGGACCT-GAGAAAATGGAGATAGATGATGAGAGTAAGCAACACCAAGGA 349
| |||||||||||| || |||||||||||||||||||||||| |||||||||| |||||
Sbjct 301 AAGAGGATACTGGA-CTCGAGAAAATGGAGATAGATGATGAGGGTAAGCAACATGAAGGA 359
Query 350 AAAAGTGAGACGGGAGATAAAGAGGCGGAGGTTACAGAAAAAGATAAGAAGGAAGAAGCA 409
|||||||||| ||||||||||||| ||||||||||| ||| ||||| ||| | |
Sbjct 360 GAAAGTGAGACAGGAGATAAAGAGGTGGAGGTTACAG---AAG--AAGAA--AAG-A--A 409
Query 410 GAGACTGCTAAAATAGACGAAGACAAGGAACAACCAGAAGCTGATAAAATGGATGAAGAC 469
||| || | | ||||||||||||||||||||||||||||||||||||||||||
Sbjct 410 -AGA-TG------TCGGTGAAGACAAGGAACAACCAGAAGCTGATAAAATGGATGAAGAC 461
Query 470 ACAGATGACAAGAACTTGAAAGCTGATGATGGTGTTTCTGGCGGTGCTACTGAGGTAGAT 529
||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct 462 ACAGATGACAAGAACTTGAAAGCTGATGATGGTGTTTCTGGCGTTGCTACTGAGGAAGAT 521
Query 530 ACTGTAATGGATGAAAATGTGGAGTCTACTGACAAGAAAGATGTAAAAGGCGCTGAAAAT 589
|||||||| | |||| |||||||||| ||||||| ||||| | || | ||||||
Sbjct 522 GCTGTAATGAAGGAAAGTGTGGAGTCTGCTGACAATAAAGA--T-----GC-C-GAAAAT 572
Query 590 CCAGAAGGAGACCAAGAGAAAACCGAGAAAGAATCAAAGGAGGAGAAACTagaaggaggg 649
|||||| | | |||| || |||||||||||||||||||||||||| |||||||||
Sbjct 573 CCAGAA-G-G----AGAG-CAA--GAGAAAGAATCAAAGGAGGAGAAACTGGAAGGAGGG 623
Query 650 aaagtaaatggaaacgaagaagggaataaggaagagatcaaagaggaagagaagTTGGTC 709
|||| |||||||||| ||| | |||| | ||| | |||||||||||||||
Sbjct 624 AAAGCAAATGGAAAC---GAA--G---AAGG--G-GAT---A-CGGAAGAGAAGTTGGTT 668
Query 710 GGTGGAGACAAAGGGGGCGATGTTGATGAGGATGAAAAGGTGGAGAATGTGGATGAAAG- 768
|||||||||||||||| |||||||||||||| ||||||||| ||||||||||||| |||
Sbjct 669 GGTGGAGACAAAGGGGACGATGTTGATGAGGCTGAAAAGGTAGAGAATGTGGATG-AAGA 727
Query 769 TGACAAAGAAGAGGCACCGAAGGA-AAGGAATGAGGGCGAACTAGCTGAAGAGG-GG--- 823
||||||||||||||||| |||||| || |||||||| |||||| |||||||||| ||
Sbjct 728 TGACAAAGAAGAGGCACTGAAGGAGAA-GAATGAGGCCGAACTGGCTGAAGAGGAGGAAA 786
Query 824 ------AA--AGAGG-AG-G-A--AA-CTAACAAAGGAGAGGAAGTGGAGGCAGACACTG 869
|| ||||| || | | || | ||||||| ||| || |||||||||||||||
Sbjct 787 CAAATAAAGGAGAGGAAGTGAAGGAAGCAAACAAAGAAGATGATGTGGAGGCAGACACTA 846
Query 870 AGGTCGATGAGCCAAAAGTGGAAGACaaaaaaaCAGAGAGTAAGGACgagaatgaaaatg 929
|||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||| ||
Sbjct 847 AGGTCGCTGAGCCAGAAGTGGAAGACAAAAAAACGGAGAGTAAGGACGAGAATGAAGAT- 905
Query 930 agataa-atga-cagcaaggatgagaatgaagagaaag-a-ggaagagaaggaagatgag 985
| | || | || || || |||||||| |||||| || | ||| || |||||||||||
Sbjct 906 AAAGAAGAAGAGAAGGAA-GATGAGAAAGAAGAG--AGTATGGATGATAAGGAAGATGA- 961
Query 986 aaa-gaagagag-tatg--gatgataaggaagatgaaaaagaagagagcaatgatgataa 1041
||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 962 AAAGGAAGAGAGCAATGATGATGATAAGGAAGATGAAAAAGAAGAGAGCAATGATGATAA 1021
Query 1042 ggaagacaaaaaagaagagatcaagaagTCTAACAAGCGAGGGAAAAGGAAGACTGAGAA 1101
|||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct 1022 GGAAGACAAAAAAGAAGATATCAAGAAGTCTAACAAGCGAGGGAAAGGGAAGACTGAGAA 1081
Query 1102 GGCTCGCGGGAAGATGAAGAGTGAGGAAGAAAAGAAGGATATAGAACCTAGGACTCC--- 1158
| |||||||||||| |||||||| ||||||||||||||||||||||||| ||||||
Sbjct 1082 GACTCGCGGGAAGACAAAGAGTGATGAAGAAAAGAAGGATATAGAACCTAAGACTCCTTT 1141
Query 1159 TTTCTCTGATCGCCCTGTCCGTGAGCGGAAGTCTGTTGAAAGGCTTGTTGCGGTGGTTGA 1218
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1142 TTTCTCTGATCGCCCTGTCCGTGAGCGAAAGTCTGTTGAAAGGCTTGTTGCGGTGGTTGA 1201
Query 1219 TAAAGATTCTTCAAAGGAATTCCATGTTGAAAAGGGAAAAGGGACACCTCTCAAAGATAT 1278
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1202 TAAAGATTCTTCAAGGGAATTCCATGTTGAAAAGGGAAAAGGGACACCTCTCAAAGATAT 1261
Query 1279 TCCCAATGTTGCTTACAGGGTATCAAGGAAGAAGTCTGATGAAGTTTTCAAGCAGTTACA 1338
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1262 TCCCAATGTTGCTTACAAGGTATCAAGGAAGAAGTCTGATGAAGTTTTCAAGCAGTTACA 1321
Query 1339 CTTC-ATTCTATTCGGTGGGAGGAGAGGAAAAGCTACTCAGCTCAAGGCAAACATATTAC 1397
| | |||||||||||||||| ||||| |||||||||||||||||||||| |||||||||
Sbjct 1322 C-ACAATTCTATTCGGTGGGAAGAGAGTAAAAGCTACTCAGCTCAAGGCACACATATTAC 1380
Query 1398 GCTTTTCTGGTTACAAATGGCAAGGAGATGAGgaaaaggcaaaattgaaagtgaaagaaa 1457
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1381 GCTTTTCTGGTTACAAATGGCAAGGAGATGAGGAAAAGGCAAAATTGAAAGTCAAAGAAA 1440
Query 1458 agattgagaaaatcaacaaagaaaaaTTGCTGGAGTTTTGCGATCTATTTGACATATCAG 1517
|| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1441 AGTTTGAGAAAATCAACAAAGAAAAATTGCTGGAGTTTTGCGATTTATTTGACATATCAG 1500
Query 1518 TTGCTAAGACTACCACAAAGAAGGAAGATATTGTCACAAAGCTGGTTGAGTTTTTGGAGA 1577
|||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1501 TTGCTAAGGCTACCACAAAGAAGGAAGATATTGTGACAAAGCTGGTTGAGTTTTTGGAGA 1560
Query 1578 AACCTCATGCAACAACTGA-----T-GTCAATGAGAAAGAGAAGGGAGCGAAGCGCAAAA 1631
||||||||||||||||||| | |||||||||||||||||||||| |||||||||||
Sbjct 1561 AACCTCATGCAACAACTGATGTTCTAGTCAATGAGAAAGAGAAGGGAGTGAAGCGCAAAA 1620
Query 1632 GAACTCCTAAGAAAAGTTCACCTGCAGCTGGAAGTTCATCTTCAAAACGATCAGCAAAGA 1691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1621 GAACTCCTAAGAAAAGTTCACCTGCAGCTGGAAGTTCATCTTCAAAACGATCAGCAAAGA 1680
Query 1692 GCCaaaaaaaGACCGAGGAAGCGACAAGGACTAA-AAA--GAGTTTACCTCATTCTGATG 1748
|||||||||||||||||||||| ||||||||||| ||| |||| || ||||||||||||
Sbjct 1681 GCCAAAAAAAGACCGAGGAAGCAACAAGGACTAACAAAAAGAGTGTAGCTCATTCTGATG 1740
Query 1749 ATGAGTCTgaagaagagaaagaggacgatgaagaagaagagaaagagcaggaggtagagg 1808
|||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct 1741 ATGAGTCTGAGGAAGAGAAAGAGGACGACGAAGAAGAAGAGAAAGAGCAGGAGGTTGAGG 1800
Query 1809 aggaagaggaggaaaatgaaaaTGGGATCCCTGATAAATCTGAGGACGAGGCGCCTCAGC 1868
||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 1801 AGGAAGAGGAGGAGAATGAAAATGGGATTCCTGATAAATCTGAGGACGAGGCTCCTCAGC 1860
Query 1869 CTTCTGAAAGTGAGGAGAAAGTTGAATCTGAGGAGGAGTCAGAGGAAGAAACTAAAAAGA 1928
|||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct 1861 TTTCTGAAAGTGAGGAGAATGTTGAATCCGAGGAGGAGTCAGAGGAAGAAACTAAAAAGA 1920
Query 1929 AGAAACGTGGTTCTAGGACATCATCTGGA-AAGAAAGAATCAGCAGGGAAATCCAGAAGC 1987
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct 1921 AGAAACGTGGTTCTAGGACATCATCTG-ATAAGAAAGAATCAGCAGGGAAATCCAGAAGC 1979
Query 1988 AAGAAAACTGCAGTCTCTACGAAATCCAGTCCACCAAAGAAAGCTACTCAAAAGCGCTCA 2047
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1980 AAGAAAACTGCAGTCCCTACGAAATCCAGTCCACCAAAGAAAGCTACTCAAAAGCGCTCA 2039
Query 2048 GCAGGTAAGCGGAAGAAGAGTGATGACGACAGTGATACAAGTCCAAAGGCATCCTCTAAG 2107
|||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2040 GCAGGTAAACGGAAGAAGAGTGATGACGACAGTGATACAAGTCCAAAGGCATCTTCTAAG 2099
Query 2108 AGGAAGAAGACTGAAAAACCGGCCAAGGAGCAGCCCTTGGCTCCTTcaaaatctgtatca 2167
||||||||||||||||||||||||||||||||| || || |||| |||||||||||||
Sbjct 2100 AGGAAGAAGACTGAAAAACCGGCCAAGGAGCAGGCCGCAGCCCCTTTAAAATCTGTATCA 2159
Query 2168 aaagagaagccaggaa-a--aa-gag-g-cggaaaagggaaagacaaaaccaaagaGCCT 2221
||||| ||||||| || | || ||| | |||||||||||||||||||| ||| ||||||
Sbjct 2160 AAAGAAAAGCCAGTAATAGGAAAGAGAGGCGGAAAAGGGAAAGACAAAAACAAGGAGCCT 2219
Query 2222 AGTGATGAAGAATTGAAAACTGCAATTATTGATATCTTGAAAGGGGTGGACTTCAACACG 2281
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2220 AGCGATGAAGAATTGAAAACTGCAATTATTGATATCTTGAAAGGGGTGGACTTCAACACG 2279
Query 2282 GCCACATTCACTGACATCCTCAAGCGACTAGATGATAAGTTCAAAATCAGTCTCGCCTCA 2341
||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct 2280 GCCACTTTCACTGACATCCTCAAGCGACTAGATGCTAAGTTCAACATCAGTCTCGCCTCA 2339
Query 2342 AAAAAGTCATCTATTAAGCTGATGATCCAAGATGAACTCACTAAGCTAGCagatgaagcc 2401
||||| |||||||| |||| ||||||||||||||| || |||||||||||||||||||||
Sbjct 2340 AAAAAATCATCTATAAAGCGGATGATCCAAGATGAGCTAACTAAGCTAGCAGATGAAGCC 2399
Query 2402 gaggatgaggaaggagaagaagaggatgctgagcatgaggaagaagaagagaaagagaaa 2461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2400 GAGGATGAGGAAGGAGAAGAAGAGGATGCTGAGCATGAGGAAGAAGAAGAGAAAGAGAAA 2459
Query 2462 gagaaagctggagaaTCTGGTGGTGGAGAGGAGGTTAAAGCTTAATCACAAAGCACATAA 2521
| |||| | | || ||||||||||||||||||||||||||||||||||| |||| |
Sbjct 2460 GCTAAAG--G-A---TCGGGTGGTGGAGAGGAGGTTAAAGCTTAATCACAAAGGACATGA 2513
Query 2522 ATCTAGTCGACCTGCTAGTTAATCTTGAAGGG-GTCTCTCCTCGATTGCCTAGCCTCCTC 2580
||||||| ||| | |||| ||||| | ||||| | | ||||||||||||||||||| |
Sbjct 2514 ATCTAGTTGACTTACTAGCTAATCGTCAAGGGTG-C-CTCCTCGATTGCCTAGCCT--TG 2569
Query 2581 AGTCATTAGGCAAATATATCAGAGAATGTAATTTGTTGGTTGTTTAGTCTGGAATTGTTT 2640
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2570 -GTCATTAGGCAAATATATCAGAGAATGTAATTTGTTGGTTGTTTAGTCTGGAATTGTA- 2627
Query 2641 CTACAATCAGAt-t-tttttttta--aaaaaaaCTTTTGGTAGAGTCGGAGGGAGGA--A 2694
|||||| ||||| | |||||||| |||||||||||||| || |||||||||||| |
Sbjct 2628 CTACAAGCAGATATATTTTTTTTTCTAAAAAAACTTTTGG-AG--TCGGAGGGAGGACGA 2684
Query 2695 -G---A-A-GTAGTAGTTTTAAGATAAGCAGCTTTGTTTGTGTGTATACCTTTTAACATA 2748
| | | |||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct 2685 CGCTGAGAAGTAGTAGTTTTAAGATAAGCAGCTTTGTTTGTGT--ATACCATTTAACATA 2742
Query 2749 AGCTCCTTTAGGATTCATGCCCAACTTGAACAGCCTTTTGATTTTTGGGT 2798
|||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2743 AGCTCCTTTAGGATTCATGCCCAACTTGAACACCCTTTTGATTTTTGGGT 2792
> AT4G26630.1 | Symbols: | DEK domain-containing chromatin associated
protein | chr4:13430527-13435770 REVERSE LENGTH=2805
Length=2805
Score = 1029 bits (557), Expect = 0.0
Identities = 1248/1567 (80%), Gaps = 105/1567 (7%)
Strand=Plus/Plus
Query 947 gatgagaatgaagagaaagaggaagagaagga-agatgagaaagaagagagtatggatg- 1004
||||| || |||| || ||||| ||||| || | |||| |||| ||||| | ||||
Sbjct 891 GATGAAAAAGAAGGGAGTGAGGATGAGAACGACA-ATGAAAAAGTGGAGAGCAAAGATGC 949
Query 1005 ataaggaagatgaaaaagaagagagc-aatgatgataaggaagacaaaaaagaagagatc 1063
| ||||||||||| ||||| |||| | ||||||||||| ||||| |||||||||||| |
Sbjct 950 A-AAGGAAGATGAGAAAGAGGAGA-CAAATGATGATAAAGAAGATGAAAAAGAAGAGAGC 1007
Query 1064 aagaag-TCTAACAAGCGAGGGAAAAGGA--AG-ACT-GA-G-AAGGCTCGCGGGAAG-A 1115
||| | ||||| ||||| |||||| ||| || || || | |||| ||||| |||| |
Sbjct 1008 AAG-GGTTCTAAAAAGCGTGGGAAAGGGACGAGTTCTGGAGGAAAGGTTCGCGAGAAGAA 1066
Query 1116 TGAAGAGTGAGGAAG-AAAAGAAGGATATAGAACCTAGGACTCCTTTCTCTGATCGCCCT 1174
| || | ||||||| |||| |||||| ||| |||||||||||||||||||||||||||
Sbjct 1067 T-AAAACCGAGGAAGTAAAA-AAGGATGCAGAGCCTAGGACTCCTTTCTCTGATCGCCCT 1124
Query 1175 GTCCGTGAGCGGAAGTCTGTTGAAAGGCTTGTTGCGGTGGTTGATAAAGATTCTTC-AAA 1233
|| ||||||||||| |||||||| ||||||||||| || |||||||||| || || |||
Sbjct 1125 GTGCGTGAGCGGAAATCTGTTGAGAGGCTTGTTGCATTGATTGATAAAGACTCCTCGAAA 1184
Query 1234 GGAATTCCATGTTGAAAAGGGAAAAGG-GACACCTCTCAAAGATATTCCCAATGTTGCTT 1292
| |||||| |||||||||||| ||| | || |||||||||||||||||||||||||
Sbjct 1185 G-AATTCCGTGTTGAAAAGGGGCGAGGTG-CATATCTCAAAGATATTCCCAATGTTGCTA 1242
Query 1293 ACAGGGTA-TCAAGGAAGAAGTCTGATGAAGTTTTCAAGCAG-TTACACTTCA-TTCTAT 1349
||| |||| | | |||||| |||||||||| ||| |||| | || ||| || ||||||
Sbjct 1243 ACAAGGTAATGA-GGAAGAGGTCTGATGAAACTTTGAAGCTGCTT-CACC-CAATTCTAT 1299
Query 1350 TCGGTGGGAGGAGAGGAAAAGCTACTCAGCTCAAGGCAAACATATTACGCTTTTCTGGTT 1409
| |||||||||||||| || ||| ||||| ||||| |||||||||| |||| |||||||
Sbjct 1300 TTGGTGGGAGGAGAGGGAAGGCTGCTCAGATCAAGACAAACATATTGGGCTTCTCTGGTT 1359
Query 1410 ACAAATGGCAAGGAGATGAGga-aaaggcaaaattgaaagtgaaagaaaagattgagaaa 1468
| ||||| ||||||||| | |||| ||||| ||||| ||||||||| ||||||||
Sbjct 1360 TCGTTTGGCATGGAGATGAGAAGAAAG-CAAAAGAAAAAGTAAAAGAAAAGCTTGAGAAA 1418
Query 1469 at-caacaaagaaaaaTTGCTGG-AGTTTTGCGATCTATTTGACATAT-CAGTTGCTAAG 1525
| || |||||| ||| || ||| ||||||| ||| | || |||||| || || | |||
Sbjct 1419 -TGCACCAAAGAGAAACTG-TGGGAGTTTTGTGATGTGTTGGACATACACA-TTACCAAG 1475
Query 1526 ACTACCACAAAGAAGGAAGATATTGTCACAAAGCTGGTTGAGTTTTTGGAGAAACCTCAT 1585
|||| |||||||||||||||||| | ||||| ||| |||||||||||||||||||||||
Sbjct 1476 GCTACAACAAAGAAGGAAGATATTATTACAAAACTGTTTGAGTTTTTGGAGAAACCTCAT 1535
Query 1586 GCAACAACTGATGT--C-----A-A-T---G------AGAAAGAGAAG----G---G--A 1618
| ||| |||||| | | | | | ||||||||||| | | |
Sbjct 1536 GTGACAGGTGATGTGACCGGTGACACTACAGTTTCTGAGAAAGAGAAGTCAAGTAAGGGA 1595
Query 1619 GCGAAGCGCAAAAGAACTCCTAAGAAAAGTTCACCTGCAGCTGGAAGTTCATCTTCAAAA 1678
|| || ||||| |||||||| ||||||| ||||||| ||||||| |||||||| || |||
Sbjct 1596 GCAAAACGCAAGAGAACTCCCAAGAAAACTTCACCTACAGCTGGGAGTTCATCCTCCAAA 1655
Query 1679 CGATCAGCAAAGAGCCaaaaaaaGACCGAGGAAGCGACAA--G--GACTAAAAAGAGTTT 1734
|||||||||||||||||||||||| | || ||||| |||| | | | |||||||||||
Sbjct 1656 CGATCAGCAAAGAGCCAAAAAAAGTCTGAAGAAGCAACAAAAGTTGTC-AAAAAGAGTTT 1714
Query 1735 ACCTCATTCTGATGATGAGTCTgaagaagagaaagaggacgatgaagaagaagagaa--a 1792
| |||||||||||||||| ||||||||||||||||| || || ||| || ||||| | |
Sbjct 1715 AGCTCATTCTGATGATGAATCTGAAGAAGAGAAAGAAGAAGAAGAAAAACAAGAGGAGGA 1774
Query 1793 ga-g-caggag-gta-gaggaggaa---gaggaggaaaatgaaaaTGGGATCCCTGATAA 1845
|| | ||| || | | || ||| || |||||||| ||||||||||| || ||||||||
Sbjct 1775 GAAGGCAGAAGAGAAAGAAGAGAAAAAAGAGGAGGAGAATGAAAATGGCATTCCTGATAA 1834
Query 1846 ATCTGAGGACGAGGCGCCTCAGCCTTCTGAAAGTGAGGAGAAAGTTGAATCTGAGGAGGA 1905
||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||| |
Sbjct 1835 ATCTGAGGATGAGGCGCCTCAGCCTTCTGAAAGCGAGGAGAAAGATGAATCTGAGGAGCA 1894
Query 1906 GTCAGAGGAAGAAACTAAAAAGAAGAAACGTGGTTCTAGGACA-TCATCTGGAAAGAAAG 1964
|| || |||||||||| ||||||||||||||||||||| | ||| |||| |||||||
Sbjct 1895 TTCTGAAGAAGAAACTACAAAGAAGAAACGTGGTTCTAG-ATTGTCAGCTGGGAAGAAAG 1953
Query 1965 AATCAGCAGGGAAATCCAGAAGCAAGAAAACTGCAGTCTCTACGAAATCCAGTCCACCAA 2024
|||||||||||| | |||||| ||||||| | | ||| || | |||||||||||||||
Sbjct 1954 AATCAGCAGGGAGAGCCAGAAACAAGAAAGCAGTGGTCGCTGCAAAATCCAGTCCACCAG 2013
Query 2025 AGAAAGCT-ACTCAAAAGCGCTCAGCAGGTAAGCGGAAGAAGAGTGATGACGACAGTGAT 2083
|||| | | || || ||||| ||| ||| || || ||||||| |||||| |||||||||
Sbjct 2014 AGAA-GATTACACAGAAGCGGTCATCAGCCAAACGAAAGAAGACTGATGATGACAGTGAT 2072
Query 2084 ACAAGTCCAAAGGCATCCTCTAAGAGGAAGAAGACTGAAAAACCGGCCAAGGAGCAGCCC 2143
|||||||||||||| |||||||||||||||||| ||||||| || ||||| | |||
Sbjct 2073 ACAAGTCCAAAGGCGTCCTCTAAGAGGAAGAAGTCTGAAAACCCTATCAAGGC-CTCCCC 2131
Query 2144 TTGGCTCCTTcaaaatctgtatcaaaagagaagccaggaaaaagaggc-ggaaaagggaa 2202
|||||||||||| |||| ||||||||||||||||| |||||| ||| |||||||||||
Sbjct 2132 --GGCTCCTTCAAAGTCTGCATCAAAAGAGAAGCCAGTAAAAAG-GGCTGGAAAAGGGAA 2188
Query 2203 agacaaaaccaaagaGCCTAGTGATGAAGAATTGAAAACTGCAATTATTGATATCTTGAA 2262
|||||| || ||| | | || ||| |||||| |||||| |||| ||||||||
Sbjct 2189 AGACAAG-CC---GAG--T-G--ATAAAGTGCTGAAAAATGCAATCGTTGAGATCTTGAA 2239
Query 2263 AGGGGTGGACTTCAACACGGCCACATTCACTGACATCCTCAAGCGA-CTAGATGATAAGT 2321
| | |||||||| | ||||| || ||||| |||||||| || || || | | | |||
Sbjct 2240 AAGAGTGGACTTTAGTACGGCTACGTTCACGGACATCCTTAAA-GAACTTGCTAAGGAGT 2298
Query 2322 TCA-A-AATCAGTCTCGCCTCAAA-AAAGTCATCTATTAAGCTGATGATCCAAGATGAAC 2378
||| | || | |||| | || || |||||||||||| ||| |||| |||||||| || |
Sbjct 2299 TCACAGAAG-A-TCTCAC-TCCAAGAAAGTCATCTATAAAGATGATAATCCAAGAGGAGC 2355
Query 2379 TCACTAAGCTAGCagatgaagccgaggatgaggaaggagaa-gaagaggatgctgagcat 2437
|||| || |||||||||| | ||||| |||||| |||| ||||||||| | ||| |
Sbjct 2356 TCACCAAATTAGCAGATGAGGAGGAGGAGGAGGAAA-AGAAAGAAGAGGATTCAGAGAAG 2414
Query 2438 gaggaag 2444
|||||||
Sbjct 2415 GAGGAAG 2421
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 139012599053
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5