BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg495669
Length=1017
Score E
Sequences producing significant alignments: (Bits) Value
AT5G55890.1 | Symbols: | Protein of unknown function (DUF295) ... 966 0.0
AT5G55880.1 | Symbols: | Protein of unknown function (DUF295) ... 966 0.0
AT5G55270.1 | Symbols: | Protein of unknown function (DUF295) ... 573 1e-162
AT5G54320.1 | Symbols: | Protein of unknown function (DUF295) ... 366 2e-100
AT5G55870.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 241 1e-62
AT1G11482.1 | Symbols: | unknown pseudogene | chr1:3867405-386... 187 2e-46
AT5G53240.1 | Symbols: | Protein of unknown function (DUF295) ... 148 8e-35
> AT5G55890.1 | Symbols: | Protein of unknown function (DUF295)
| chr5:22622737-22623837 REVERSE LENGTH=1101
Length=1101
Score = 966 bits (523), Expect = 0.0
Identities = 579/606 (96%), Gaps = 4/606 (1%)
Strand=Plus/Plus
Query 414 ACCGGCTCAACGTAACTCTGAGTGGATCAATGTCAGAATCGCAAACCCTTGTTTCTACTC 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 498 ACCGGCTCAACGTAACTCTGAGTGGATCAATGTCAGAATCGCAAACCCTTGTTTCTACTC 557
Query 474 CTCTCGTGTCATGTTTTCGGAGAAACATGACATGTTTTGCATCCCCGGATCTGGAGGCCA 533
||||||||||||||||||||||||||||||| ||||| |||| |||||||| ||||||||
Sbjct 558 CTCTCGTGTCATGTTTTCGGAGAAACATGACTTGTTTCGCATTCCCGGATCAGGAGGCCA 617
Query 534 TCTCATTGCATCATGGGACCTCCACACAGACAAGCACAAAAATCCCAAGTTTCAGAGGTT 593
| ||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct 618 TATCATTGCTTCATGGGATCTCCACAAAGACAAGCACAAAAATCCCAAGTTTCAGAGGTT 677
Query 594 GAGGTTCCAAAACATTCCAAAGCTGACAAAGACCAAACGAGAGATTATGGATTCGTGCTA 653
| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 678 GCGGTTCCAAAACCTTCCAAAGCTGACAAAGACCAAACGAGAGGTTATGGATTCGTGCTA 737
Query 654 CAAAAGCGAACACTTGGTGGAGTCAAGAACCACCGGTGAAACTTTCTTGGTTAAGTGGTA 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 738 CAAAAGCGAACACTTGGTGGAGTCAAGAACCACCGGTGAAACTTTCTTGGTTAAGTGGTA 797
Query 714 CAGGAAGGCCGTCTGGAGAGGTATGTCGAAATTGAGCACAAAAGCTTTAATGGTGTTCAG 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 798 CAGGAAGGCCGTCTGGAGAGGTATGTCGAAATTGAGCACAAAAGCTTTAATGGTGTTTAG 857
Query 774 GCTGGACGACGAAGGAAATGCTGTTTACACTATAGACATTGGAGATCTATGCATTTTCCT 833
||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 858 GCTAGACGACGAAGGAAATGCTGTTTACACTAAAGACATTGGAGATCTATGCATTTTCCT 917
Query 834 CTCAAAATCTGAACCTTTTTGTGTCTCTCTTAGCTCCTTACCAGGCATGTTTTTCCCTAA 893
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 918 CTCAAAATCTGAACCTTTTTGTGTCTCTCTTAGCTCCTTACCACGCATGTTTTTCCCTAA 977
Query 894 CAATGTTGAATACATGGATGCGGACGAAGCCGGATATTATGA-TCTGGC-AGATTCTTCT 951
||||||||||||||||||||| ||||||| |||||||| | | ||| || |||| || |
Sbjct 978 CAATGTTGAATACATGGATGCTGACGAAGACGGATATT-TCAATCTAGCCAGATCCTCC- 1035
Query 952 ATCGTTGGTGATCTTACTCTAATGGGGACCGGTGTCTATATTCCACCTCAAAATATAGAC 1011
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1036 ATCGTTGGTGATCTTACTAGAATGGGGACCGGTGTCTATATTCCACCTCAAAATATAGAC 1095
Query 1012 AACTAG 1017
||||||
Sbjct 1096 AACTAG 1101
Score = 638 bits (345), Expect = 0.0
Identities = 386/405 (95%), Gaps = 6/405 (1%)
Strand=Plus/Plus
Query 1 ATGTCTCTGCTTCTCAACCAGCCCTCGAAGCTACTATGCTTCCGGAGGAAATCTGTGT-T 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct 1 ATGTCTCTGCTTCTCAACCAGCCCTCGAAGCTACTATGCTTCCGGAGGAAATCTGT-TCT 59
Query 60 GGTAAGATCCTCTCCTCTTCTCTCTAATGGCTTATCATCTTCATTGCGGCAAACTCCGCC 119
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 60 GGTAAGATCCTCTCCTCTTCTCTCTAATGGTTTATCATCTTCATTGCGGCAAACTCCGCC 119
Query 120 TTGTACCATCATCGACGCTGTTCCATGTGGAGCGGATCTCGGAAAACTCGTCATTTCCAA 179
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct 120 TTGTACCATCATCGACGCTGTTCCATGTGGAGAGGATCTCGGAAAACTCGTCATTTACAA 179
Query 180 TGCTAACGCAGTTCGCTACACTTACTTGGAAAAGAAGGTGCCTCTGGAGTTGGTGGATAA 239
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct 180 TGCTAACGCAGTTCACTTCACTTACTTGGAAAAGAAGGTGCCTCTGGAGTTGGTGGATAA 239
Query 240 TCCAATGTTAACGATCGGGTCATCCCATGGCTGGATAGCTACTTTGAGTCAGGACGACGG 299
||||||| ||||||||||||| |||||||| ||| |||||||||||||||||||||||||
Sbjct 240 TCCAATGGTAACGATCGGGTCGTCCCATGGTTGGGTAGCTACTTTGAGTCAGGACGACGG 299
Query 300 AATACTTCGTCTCCAAGACGATCTAAACCCGGTTGCATCGGATATAGAACCG-AAACGCA 358
|||||||||||||||||| ||||||||||||| ||||||||||| | |||| |||||||
Sbjct 300 AATACTTCGTCTCCAAGATGATCTAAACCCGGCTGCATCGGATACA-AACCCTAAACGCA 358
Query 359 TTCCACT-GCCTCCTCTTGTAACTCTGCCTCATTGCCAAACTCAA 402
|||| || |||||||||||||||||||||||||||||||||||||
Sbjct 359 TTCC-CTTGCCTCCTCTTGTAACTCTGCCTCATTGCCAAACTCAA 402
> AT5G55880.1 | Symbols: | Protein of unknown function (DUF295)
| chr5:22619104-22620204 REVERSE LENGTH=1101
Length=1101
Score = 966 bits (523), Expect = 0.0
Identities = 579/606 (96%), Gaps = 4/606 (1%)
Strand=Plus/Plus
Query 414 ACCGGCTCAACGTAACTCTGAGTGGATCAATGTCAGAATCGCAAACCCTTGTTTCTACTC 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 498 ACCGGCTCAACGTAACTCTGAGTGGATCAATGTCAGAATCGCAAACCCTTGTTTCTACTC 557
Query 474 CTCTCGTGTCATGTTTTCGGAGAAACATGACATGTTTTGCATCCCCGGATCTGGAGGCCA 533
||||||||||||||||||||||||||||||| ||||| |||| |||||||| ||||||||
Sbjct 558 CTCTCGTGTCATGTTTTCGGAGAAACATGACTTGTTTCGCATTCCCGGATCAGGAGGCCA 617
Query 534 TCTCATTGCATCATGGGACCTCCACACAGACAAGCACAAAAATCCCAAGTTTCAGAGGTT 593
| ||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct 618 TATCATTGCTTCATGGGATCTCCACAAAGACAAGCACAAAAATCCCAAGTTTCAGAGGTT 677
Query 594 GAGGTTCCAAAACATTCCAAAGCTGACAAAGACCAAACGAGAGATTATGGATTCGTGCTA 653
| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 678 GCGGTTCCAAAACCTTCCAAAGCTGACAAAGACCAAACGAGAGGTTATGGATTCGTGCTA 737
Query 654 CAAAAGCGAACACTTGGTGGAGTCAAGAACCACCGGTGAAACTTTCTTGGTTAAGTGGTA 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 738 CAAAAGCGAACACTTGGTGGAGTCAAGAACCACCGGTGAAACTTTCTTGGTTAAGTGGTA 797
Query 714 CAGGAAGGCCGTCTGGAGAGGTATGTCGAAATTGAGCACAAAAGCTTTAATGGTGTTCAG 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 798 CAGGAAGGCCGTCTGGAGAGGTATGTCGAAATTGAGCACAAAAGCTTTAATGGTGTTTAG 857
Query 774 GCTGGACGACGAAGGAAATGCTGTTTACACTATAGACATTGGAGATCTATGCATTTTCCT 833
||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 858 GCTAGACGACGAAGGAAATGCTGTTTACACTAAAGACATTGGAGATCTATGCATTTTCCT 917
Query 834 CTCAAAATCTGAACCTTTTTGTGTCTCTCTTAGCTCCTTACCAGGCATGTTTTTCCCTAA 893
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 918 CTCAAAATCTGAACCTTTTTGTGTCTCTCTTAGCTCCTTACCACGCATGTTTTTCCCTAA 977
Query 894 CAATGTTGAATACATGGATGCGGACGAAGCCGGATATTATGA-TCTGGC-AGATTCTTCT 951
||||||||||||||||||||| ||||||| |||||||| | | ||| || |||| || |
Sbjct 978 CAATGTTGAATACATGGATGCTGACGAAGACGGATATT-TCAATCTAGCCAGATCCTCC- 1035
Query 952 ATCGTTGGTGATCTTACTCTAATGGGGACCGGTGTCTATATTCCACCTCAAAATATAGAC 1011
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1036 ATCGTTGGTGATCTTACTAGAATGGGGACCGGTGTCTATATTCCACCTCAAAATATAGAC 1095
Query 1012 AACTAG 1017
||||||
Sbjct 1096 AACTAG 1101
Score = 638 bits (345), Expect = 0.0
Identities = 386/405 (95%), Gaps = 6/405 (1%)
Strand=Plus/Plus
Query 1 ATGTCTCTGCTTCTCAACCAGCCCTCGAAGCTACTATGCTTCCGGAGGAAATCTGTGT-T 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct 1 ATGTCTCTGCTTCTCAACCAGCCCTCGAAGCTACTATGCTTCCGGAGGAAATCTGT-TCT 59
Query 60 GGTAAGATCCTCTCCTCTTCTCTCTAATGGCTTATCATCTTCATTGCGGCAAACTCCGCC 119
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 60 GGTAAGATCCTCTCCTCTTCTCTCTAATGGTTTATCATCTTCATTGCGGCAAACTCCGCC 119
Query 120 TTGTACCATCATCGACGCTGTTCCATGTGGAGCGGATCTCGGAAAACTCGTCATTTCCAA 179
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct 120 TTGTACCATCATCGACGCTGTTCCATGTGGAGAGGATCTCGGAAAACTCGTCATTTACAA 179
Query 180 TGCTAACGCAGTTCGCTACACTTACTTGGAAAAGAAGGTGCCTCTGGAGTTGGTGGATAA 239
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct 180 TGCTAACGCAGTTCACTTCACTTACTTGGAAAAGAAGGTGCCTCTGGAGTTGGTGGATAA 239
Query 240 TCCAATGTTAACGATCGGGTCATCCCATGGCTGGATAGCTACTTTGAGTCAGGACGACGG 299
||||||| ||||||||||||| |||||||| ||| |||||||||||||||||||||||||
Sbjct 240 TCCAATGGTAACGATCGGGTCGTCCCATGGTTGGGTAGCTACTTTGAGTCAGGACGACGG 299
Query 300 AATACTTCGTCTCCAAGACGATCTAAACCCGGTTGCATCGGATATAGAACCG-AAACGCA 358
|||||||||||||||||| ||||||||||||| ||||||||||| | |||| |||||||
Sbjct 300 AATACTTCGTCTCCAAGATGATCTAAACCCGGCTGCATCGGATACA-AACCCTAAACGCA 358
Query 359 TTCCACT-GCCTCCTCTTGTAACTCTGCCTCATTGCCAAACTCAA 402
|||| || |||||||||||||||||||||||||||||||||||||
Sbjct 359 TTCC-CTTGCCTCCTCTTGTAACTCTGCCTCATTGCCAAACTCAA 402
> AT5G55270.1 | Symbols: | Protein of unknown function (DUF295)
| chr5:22419157-22420410 FORWARD LENGTH=1254
Length=1254
Score = 573 bits (310), Expect = 1e-162
Identities = 514/609 (84%), Gaps = 28/609 (5%)
Strand=Plus/Plus
Query 414 ACCGGCTCAACGTAACTCTGAGTGGATCAATGTCAGAATCGCAAACCCTTGTTTCTACTC 473
||| |||||| ||||||| |||||||||| ||||||||||||||||||| ||||||||
Sbjct 553 ACCTGCTCAAAGTAACTCCAAGTGGATCAACATCAGAATCGCAAACCCTTGCTTCTACTC 612
Query 474 CTCTCGTGTCATGTTTTCGGAGAAACATGACATGTTTTGCATCCCCGGATCTGGAGGCCA 533
||||||||||||||||||| ||||| |||| |||||| |||| | |||||||||||||||
Sbjct 613 CTCTCGTGTCATGTTTTCGAAGAAAGATGAGATGTTTCGCATACTCGGATCTGGAGGCCA 672
Query 534 TCTCATTGCATCATGGGACCTCCACACAGACAAGCACAAAAATCCCAAGTTTCAGAGGTT 593
| |||||| ||||||||| ||||||||| |||| |||||| || |||||| || ||
Sbjct 673 TATCATTGGATCATGGGATCTCCACACACACAA--TCAAAAA--CC--GTTTCAAAGATT 726
Query 594 GAGGTTCCAAAACATTCCAAAGCTGACAAAGACCAAACGAGAGATTATGGATTCGTGCTA 653
| ||||| ||||| |||| ||||||||||||||||||| |||| | ||||||||||||||
Sbjct 727 GCGGTTCAAAAACCTTCCCAAGCTGACAAAGACCAAACAAGAGCTGATGGATTCGTGCTA 786
Query 654 CAAAAGCGAACACTTGGTGGAGTCAAGAACCACCGGTGAAAC-TTTCTTGGTTAAGTGGT 712
|||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct 787 CAAAAGCGAACACTTGGTGGAGTCAAGAACCACCGGTGAAACATTT-TTGGTTAAGTGGT 845
Query 713 ACAGGAAGGCCGTCTGGAGAGGTATGTCGAAATTGAGCACAAAAGCTTTAATGGTGTTCA 772
| |||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||
Sbjct 846 ATAGGAAGGCCGTCTGGAGAGGTATGTCGAAACTGAAAACAAAAGCTTTAATGGTATTCA 905
Query 773 GGCTGGACGACGAAGGAAATGCTGTTTACACT-ATAGACATTGGAGATCTATGCATTTTC 831
||| |||||| ||||||| |||||||||||| | ||| ||||||||||| |||||||||
Sbjct 906 AGCTAGACGACAAAGGAAACGCTGTTTACACTCA-AGATATTGGAGATCTCTGCATTTTC 964
Query 832 CTCTCAAAATCTGAACCTTTTTGTGT-CTCTCTTAGCTCCTTACCAGGCATGTTTTTCCC 890
|||||||| |||||||| |||||||| | || |||||||||| || || ||| | |||||
Sbjct 965 CTCTCAAAGTCTGAACCATTTTGTGTAC-CTGTTAGCTCCTTTCCTGGTATGATGTTCCC 1023
Query 891 TAACAATGTTGAA--TACATGGATG-CGGACGAAGCCGGATATTATGA-TCTGGCAGATT 946
|||| | || || | | ||||| ||| ||| |||||| | | |||||| ||||
Sbjct 1024 TAACCACGTC-AACCT-CGCGGATGTCGGT-GAAAAGGGATATG-TCAATCTGGCTGATT 1079
Query 947 CTTCTATCGT-TGGT-GATCTTACTCTAATGGGGACC-GGTGT-CTATATTCCACCTCAA 1002
|||| ||| | || | | | |||| ||| ||| || ||| | | ||||||||||||||
Sbjct 1080 CTTCCATC-TCTGCTCG-TAATACTAGAATCGGG-CCAGGT-TACCATATTCCACCTCAA 1135
Query 1003 AATATAGAC 1011
| |||||||
Sbjct 1136 ATTATAGAC 1144
> AT5G54320.1 | Symbols: | Protein of unknown function (DUF295)
| chr5:22062805-22063914 FORWARD LENGTH=1110
Length=1110
Score = 366 bits (198), Expect = 2e-100
Identities = 346/414 (84%), Gaps = 24/414 (6%)
Strand=Plus/Plus
Query 7 CTGCTTCTCAACCAGCCCTCGAAGCTACTATGCTTCCGGAGGAAATCTGTGTTGGTAAGA 66
|||||||||||||| |||| ||||||||||||||| ||||||||| |||||||||| |||
Sbjct 7 CTGCTTCTCAACCAACCCTTGAAGCTACTATGCTTTCGGAGGAAACCTGTGTTGGTGAGA 66
Query 67 TCCTCTCCTCTTCTCTCT-A--ATGGCTTATCATCTTCATTGCGGCAAACTCCGCCTTGT 123
|| ||||||||||||||| | |||||||||||||||| |||| ||||||||| ||||||
Sbjct 67 TCATCTCCTCTTCTCTCTAATGATGGCTTATCATCTTCTTTGCTGCAAACTCCTCCTTGT 126
Query 124 ACCATCATCGA-CGCTGTTCCATGTGG-AG-C--G-G-ATCTCGGAAAACTCGTCATTTC 176
| || || | |||| | ||||| || | | | | ||||||||||| ||||
Sbjct 127 TTCGTCGTC-AGCGCTAAACGTTGTGGAAGACTTGCGAAAGAGGGAAAACTCGTGATTTT 185
Query 177 CAATGCTAACGCAGTTCG-CTACACTTAC-TTGGAAAAGAAGGTGCCTCTGGAGTTG--G 232
||| || | | || | | | ||||| | ||||| |||||||||||| ||| |||| |
Sbjct 186 GAATCCTTATGAAGAT-GAATGCACTT-CTTTGGATAAGAAGGTGCCTATGGCGTTGTTG 243
Query 233 T-GGATAATCCAA--TGTTAACGATCGGGTCATCCCATGGCTGGATAGCTACTTTGAGTC 289
| |||||| || || |||| ||||| |||||||||||||||||||||||||||||||
Sbjct 244 TATGATAAT-GAACTTG-TAACCATCGGTTCATCCCATGGCTGGATAGCTACTTTGAGTC 301
Query 290 AGGACGACGGAATACTTCGTCTCCAAGACGATCTAAACCCGGTTGCATCGGATA-TAGAA 348
||||||||||| |||| ||||||||||||||||||||||||||||||||||||| || |
Sbjct 302 AGGACGACGGACTACTGCGTCTCCAAGACGATCTAAACCCGGTTGCATCGGATACTA-AC 360
Query 349 CCGAAACGCATTCCACTGCCTCCTCTTGTAACTCTGCCTCATTGCCAAACTCAA 402
|||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct 361 CCGAAACGCATTCCCCTGCCTCCTCTTGTAACTCTCCCTCATTGCCAAACTCAA 414
Score = 322 bits (174), Expect = 4e-87
Identities = 405/508 (80%), Gaps = 50/508 (10%)
Strand=Plus/Plus
Query 414 ACCGGCTCAACGTAACTCTGAGTGGATCAATGTCAGAATCGCAAACCCTTGTTTCTACTC 473
|||||||||| ||||||| ||||||||||| ||||||||| |||||||||||||||||
Sbjct 510 ACCGGCTCAAAGTAACTCCGAGTGGATCAACATCAGAATCGAAAACCCTTGTTTCTACTT 569
Query 474 CTCTCGTGTCATGTTTTCGGAGAAACATGACATGTTTTGCATCCCCGGATCTGGAGGCCA 533
||||||||||||| || ||||| || ||||||||||||| |||||||||||||| ||
Sbjct 570 ATCTCGTGTCATGTACTCCAAGAAAGATAACATGTTTTGCATTCCCGGATCTGGAGGACA 629
Query 534 TCTCATTGCATCATGGGACCTCCACACAGACAAGCACAAAAATCCCAAGTTT-CAGAGGT 592
||||||| | ||||||| |||| |||| ||||| | || || ||| ||||| |
Sbjct 630 CCTCATTGGAACATGGGATCTCCGCACACACAAG--C----AT---AA-TTTGCAGAGCT 679
Query 593 TG-AGGTTCCAAAACATTCCAAAGCTGACAAAGACCAAACGAGA-GATTA-TGGATTCGT 649
|| | ||| |||||| |||| ||||||||||||||||||| ||| | | | ||||||| |
Sbjct 680 TGCA-GTTTCAAAACCTTCCCAAGCTGACAAAGACCAAAC-AGAAGCT-ACTGGATTCAT 736
Query 650 GCTACAAAAGCGAACACTTGGTGGAGTCAAGAACCACC-GGTGAAACTTTCTTGGTTAAG 708
| | ||| ||||| |||||||| |||||| ||| | |||||||||||||||||||||
Sbjct 737 GTTGCAAGAGCGAGCACTTGGTTGAGTCA----CCAGCTGGTGAAACTTTCTTGGTTAAG 792
Query 709 TGGTACAGGAAGGC--C--G-----TC-TGGAGAGGTAT-GTCG-AAATTGAGCACAAAA 756
||||||| |||| | | | || | || ||||| | || |||| || ||| ||
Sbjct 793 TGGTACAAGAAGTCTTCAAGCAAGATCATCAAG-GGTATTG-CGCAAAT-GAAAACACAA 849
Query 757 GCTTTAATGGTGTTCAGGCTGGACGA-CGAAGGAAATGCTGTTTACACT-ATAGACATTG 814
|||||||||||||||| ||| ||||| | ||||||| || ||||||||| | ||| ||||
Sbjct 850 GCTTTAATGGTGTTCAAGCTTGACGAAC-AAGGAAACGCGGTTTACACTCA-AGATATTG 907
Query 815 GAGATCTATGCATTTTCCTCTCAAAATCTGAACCTTTTTGTGTCTCT--CTTAGCTCCTT 872
||||||| |||||||| || ||||| |||||||||||||||||| || || ||||| ||
Sbjct 908 GAGATCTCTGCATTTTTCTTTCAAAGTCTGAACCTTTTTGTGTC-CTTGCT-AGCTCTTT 965
Query 873 ACCAGG-CATGTTTTTCCCTAACAATGT 899
|| || | ||| ||||||||||||
Sbjct 966 TCCCGGAC-TGTG---CCCTAACAATGT 989
> AT5G55870.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana
protein match is: Protein of unknown function (DUF295)
(TAIR:AT5G54330.1); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink). | chr5:22612637-22613311 REVERSE LENGTH=675
Length=675
Score = 241 bits (130), Expect = 1e-62
Identities = 185/210 (88%), Gaps = 10/210 (5%)
Strand=Plus/Plus
Query 198 CACTTACTTGGAAAAGAAGGTGCCTCTGGAGTTGGTGGATA---ATCCAATGTTAACGAT 254
||||| ||||||||||||||| ||||| |||||||| ||| |||||||| |||||||
Sbjct 165 CACTTGCTTGGAAAAGAAGGTACCTCTAGAGTTGGTAAATAGTGATCCAATGGTAACGAT 224
Query 255 CGGGTCATCCCATGGCTGGATAGCTACTTTGAGTCAGGACGACGGAATACTT-CGTCTCC 313
||||||||||||||| ||| |||||||||||| |||| || || ||| || |||||||
Sbjct 225 CGGGTCATCCCATGGTTGGGTAGCTACTTTGA---AGGAGGATGGTATA-TTGCGTCTCC 280
Query 314 AAGACGATCTAAACCCGGTTGCATCGGATATAGAACCG-AAACGCATTCCACTGCCTCCT 372
|||||||||||||||||||||||||||||| | |||| ||||||||||| |||||||||
Sbjct 281 AAGACGATCTAAACCCGGTTGCATCGGATACA-AACCCTAAACGCATTCCCCTGCCTCCT 339
Query 373 CTTGTAACTCTGCCTCATTGCCAAACTCAA 402
|||||||||||||||||||||||||| |||
Sbjct 340 CTTGTAACTCTGCCTCATTGCCAAACCCAA 369
> AT1G11482.1 | Symbols: | unknown pseudogene | chr1:3867405-3868870
REVERSE LENGTH=1123
Length=1123
Score = 187 bits (101), Expect = 2e-46
Identities = 230/290 (79%), Gaps = 17/290 (6%)
Strand=Plus/Plus
Query 579 CAAGTTTCAGAGGTTGAGGTTCCAAAACATTCCAAAGCTGACAAAG-ACCAAACGAGAGA 637
|||||| |||||| || | || | |||| || | ||| |||||||| | || || ||
Sbjct 637 CAAGTTGCAGAGGGTGCGATTTCGAAACCTTGCTAAGTTGACAAAGAAGGAATGGA-AGC 695
Query 638 TTATGGATTCGTGCTA-CAAAAGCGAACACTTGGTGGAGTCAAGAACCACCGGTGAAACT 696
|| |||||||||| || || |||||||| ||||||||||| || | | |||||||
Sbjct 696 TTTTGGATTCGTG-TAGCAGGAGCGAACATTTGGTGGAGTC-AGCA-GA-AAATGAAACT 751
Query 697 TTCTTGGTTAAGTGGTACAGGAAGGCC-GTCTGGAGAGGTATGTCGA-AAT--TGAGCA- 751
|||||||||||||||||||||||| | | ||| | || || ||| ||| ||
Sbjct 752 TTCTTGGTTAAGTGGTACAGGAAGAAAAG-CAA-AGAT-T-TGAAGAGAATGATGA-CAA 806
Query 752 CAAAAGCTTTAATGGTGTTCAGGCTGGACGACGAAGGAAATGCTGTTTACACTATAGACA 811
|||| ||| |||||||||||| ||| ||| | ||||||||||||||||||||| |||||
Sbjct 807 CAAAGGCTGTAATGGTGTTCAAGCTTGACAAAGAAGGAAATGCTGTTTACACTCGAGACA 866
Query 812 TTGGAGATCTATGCATTTTCCTCTCAAAATCTGAACCTTTTTGTGTCTCT 861
|||||||||| |||||||||||||||||||||||| |||| |||||||||
Sbjct 867 TTGGAGATCTCTGCATTTTCCTCTCAAAATCTGAATCTTTCTGTGTCTCT 916
> AT5G53240.1 | Symbols: | Protein of unknown function (DUF295)
| chr5:21601481-21602739 FORWARD LENGTH=1259
Length=1259
Score = 148 bits (80), Expect = 8e-35
Identities = 131/155 (85%), Gaps = 5/155 (3%)
Strand=Plus/Plus
Query 249 AACGATCGGGTCATCCCATGGCTGGATAGCTACTTTGAGTCAGGACGACGGAATACTTCG 308
|||||||||||| || ||||| ||| ||| |||||| | | ||||||||||| || ||
Sbjct 291 AACGATCGGGTCTTCGCATGGTTGGGTAGTTACTTT-A--AAAGACGACGGAATTCTACG 347
Query 309 TCTCCAAGACGATCTAAACCCGGTTGCATCGGATATAGAACCGAAACGCAT-TCCACTGC 367
||||||||||||||||||||||||||| || || | ||| || |||||||| || ||||
Sbjct 348 TCTCCAAGACGATCTAAACCCGGTTGCGTCAGAGACAGATCCCAAACGCATCTCG-CTGC 406
Query 368 CTCCTCTTGTAACTCTGCCTCATTGCCAAACTCAA 402
| |||||||| |||||||||||||||||||| |||
Sbjct 407 CCCCTCTTGTGACTCTGCCTCATTGCCAAACCCAA 441
Score = 113 bits (61), Expect = 3e-24
Identities = 104/124 (84%), Gaps = 6/124 (5%)
Strand=Plus/Plus
Query 1 ATGTCTCTGCTTCTCAACCAGCCCTCGAAGCTACTATGCTTCCGGAGGAAATCTGTGTTG 60
||||||||||||||||||||||||||||||||| | |||| ||||| | ||||||||
Sbjct 67 ATGTCTCTGCTTCTCAACCAGCCCTCGAAGCTA-T--GCTTTCGGAG-AC--CTGTGTTG 120
Query 61 GTAAGATCCTCTCCTCTTCTCTCTAATGGCTTATCATCTTCATTGCGGCAAACTCCGCCT 120
| |||||||||||||||| |||||||||||| || ||||| | | |||||| || |||
Sbjct 121 GCGAGATCCTCTCCTCTTCACTCTAATGGCTTCTCTTCTTCCTCGTTGCAAACCCCTCCT 180
Query 121 TGTA 124
|||
Sbjct 181 AGTA 184
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 49832273824
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5