BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg495673
Length=2055
Score E
Sequences producing significant alignments: (Bits) Value
AT5G55910.1 | Symbols: D6PK | D6 protein kinase | chr5:22639844... 3064 0.0
AT4G26610.1 | Symbols: D6PKL1, AGC1-2 | D6 protein kinase like ... 1279 0.0
AT3G12690.1 | Symbols: AGC1.5 | AGC kinase 1.5 | chr3:4030447-4... 176 7e-43
> AT5G55910.1 | Symbols: D6PK | D6 protein kinase | chr5:22639844-22642354
REVERSE LENGTH=2065
Length=2065
Score = 3064 bits (1659), Expect = 0.0
Identities = 1950/2083 (94%), Gaps = 50/2083 (2%)
Strand=Plus/Plus
Query 1 ATGGTAGACCCAA--ctctctctctctt--c-tc-ctaac-actctctcttcctctctct 53
||||||||||||| ||||||||||||| | | || | |||||||| |||||||||
Sbjct 1 ATGGTAGACCCAATTCTCTCTCTCTCTTAACAACACTCTCTCCTCTCTCTCCCTCTCTCT 60
Query 54 atctATCCCCATTTCCATGGAAGCAAGCAGATGTGTTCAT-CTATCTCTTTCTCTCTCTA 112
|||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||
Sbjct 61 ATCTATCCCCATTTCCATGGAAGCAAGCAGATGTGTTCTTAC-ATCTCTTTCTCTCTCTA 119
Query 113 CAGCCTTACATGAACAGTGACTGTtctctctctctctctctcCTCCCTTTTTGCTTCTAC 172
||||||||||||||||||||||||||||||||| || ||||||| ||||||| |||||||
Sbjct 120 CAGCCTTACATGAACAGTGACTGTTCTCTCTCTTTCCCTCTCCTTCCTTTTTTCTTCTAC 179
Query 173 TTCTTCTTCCCTTTGCTTAAATTTCATCTCGAAAAAAGGGTATCTCGTGATCTTTATCGC 232
|||| |||||||||| | | ||| |||||||||||||||||||||||||||
Sbjct 180 TTCTCCTTCCCTTTG---------C-T-TCG--AAAAGGGTATCTCGTGATCTTTATCGC 226
Query 233 TTAAAAATCTTCACTTTCAGGTAACGACAAAT-TTTGATGGAATCTGCGACAGTATTGAT 291
| |||||||||||||||||| | | | | | | ||||||||||||| ||||||||||||
Sbjct 227 TCAAAAATCTTCACTTTCAGATCA-GGCCACTCGTTGATGGAATCTGTGACAGTATTGAT 285
Query 292 TACT--AGAGTCAAGACAAGTTCTTTAAATCTCAGGCAAGAAGGAA-T--TG-----G-T 340
|||| ||||| |||||||||||||||||||||||| ||||||||| | || | |
Sbjct 286 TACTAGAGAGTAAAGACAAGTTCTTTAAATCTCAGGGAAGAAGGAATTGGTGTTTAAGAT 345
Query 341 T--TCTAAG--AATGATGGCTTCAAAAACTCCAGAAGGATCACTTACCAATTCCAGTCAA 396
| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 346 TGCTCTGTGTTAATGATGGCTTCAAAAACTCCAGAAGGATCACTTACCAATTCCAGTCAA 405
Query 397 AGTATGTCAATCAACACTTTAGCAGATCAAGTATCTTCGAGTTTGTCTTTCGCCGATCCA 456
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 406 AGTATGTCAATCAACACTTTAGCAGATCAAGTATCTTCGAGTTTGTCTTTCGCTGATCCA 465
Query 457 AGTAGTGATGGTAAAACCGGTAATAGTAAGATCAACGAGCAAGGTGAGAGTGGAAAGAGT 516
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 466 AGTAGTGATGGCAAAACCGGTAATAGTAAGATCAACGAGCAAGGTGAGAGTGGAAAGAGT 525
Query 517 AGCACTTGTAGACCGAGCACAAGCAGTGATATAAGCGATGAGAGCACTTGTAGCAGCTTT 576
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct 526 AGCACTTGTAGACCAAGTACAAGCAGTGATATAAGCGATGAGAGCACTTGTAGCAGCTTT 585
Query 577 AGTAGCAGTATCAACAAACCTCACAAGGCTAATGATGTGAGATGGGAAGCCATTCAAGCT 636
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 586 AGTAGCAGTATCAACAAACCTCACAAGGCTAATGATGTGAGATGGGAAGCTATTCAAGCT 645
Query 637 GTTAGAACGAAACATGGTGGTTTGGGTTTGAATCATTTTAGGCTCTTGAAGAGGTTAGGA 696
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 646 GTTAGAACTAAACATGGTGGTTTGGGTTTGAATCATTTTAGGCTCTTGAAGAGGTTAGGA 705
Query 697 TGTGGAGATATTGGAACTGTTCATCTTGCTGAGTTAAATGGAAC-ACGGTGTTATTTTGC 755
||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||
Sbjct 706 TGTGGAGATATTGGAACTGTTCATCTTGCTGAGTTGAATGGAACTA-GGTGTTATTTTGC 764
Query 756 GATGAAGGTTATGGATAAAACCGCTTTGGCTAGCCGGAAAAAGCTTCTTAGGGCTCAAAC 815
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 765 GATGAAGGTTATGGATAAAACTGCTTTGGCTAGCCGGAAAAAGCTTCTTAGGGCTCAAAC 824
Query 816 TGAAAGAGAGATATTGCAGTGTCTTGATCACCCGTTTCTCCCGACATTGTATAGTCATTT 875
||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 825 TGAAAGAGAGATATTGCAGTGTCTTGATCACCCGTTTCTTCCGACTTTGTATAGTCATTT 884
Query 876 CGAGACTGAGAAGTTCTCTTGTTTGGTGATGGAGTTTTGTCCTGGTGGTGATTTGCATAC 935
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 885 TGAGACAGAGAAGTTCTCTTGTTTGGTGATGGAGTTTTGTCCTGGTGGTGATTTGCATAC 944
Query 936 ACTAAGGCAGAGACAACCCGGGAAACGCTTCACCGAGCAAGCAGCTAAGTTTTATGTAGC 995
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 945 ACTAAGGCAGAGACAACCCGGGAAACGCTTCACCGAGCAAGCAGCTAAGTTTTATGTCGC 1004
Query 996 AGAAGTGCTTCTTGCGATGGAATATCTACACATGCTTGGGATCATTTACCGTGATTTGAA 1055
|||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 1005 GGAAGTGCTTCTTGCAATGGAATATTTACACATGCTTGGGATCATTTACCGTGATCTGAA 1064
Query 1056 ACCCGAGAATGTTCTTGTGAGAGATGATGGACACGTGATGCTTTCGGATTTTGATCTCTC 1115
||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1065 ACCCGAGAACGTTCTTGTGAGAGATGATGGGCACGTGATGCTTTCGGATTTTGATCTCTC 1124
Query 1116 CCTGAGATGTACCGTGAGCCTCTCTATAGTCAGATCAGCCAATGTCGGATCTGAGGGCTT 1175
|||||||||||| |||||||||||||||||||||||||| ||||| ||||| || |||||
Sbjct 1125 CCTGAGATGTACTGTGAGCCTCTCTATAGTCAGATCAGCTAATGTTGGATCCGAAGGCTT 1184
Query 1176 GTCAAAGAATTCGGTTTCTTGCTCGCAACAACCTGCCTGCATCCAGCAACCATCTTGCAT 1235
||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1185 GTCGAAGAATTCGGTTTCTTGCTCGCAACAACCTGCATGCATCCAGCAACCATCTTGCAT 1244
Query 1236 CTCAATGGCTCCAACATCTTGCTTCTCTCCTCGATTCTTCTCATCGAAATCCAAGAAAGA 1295
||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct 1245 CTCAATGGCTCCAACATCTTGCTTCGGTCCTCGGTTCTTCTCATCGAAATCCAAGAAAGA 1304
Query 1296 CAAGAAACCGAAAACCGAGAACGGGAACCACCAAGTAACTCCGTTACCAGAACTCGTTGC 1355
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1305 CAAGAAACCGAAAACCGAAAACGGGAACCACCAAGTAACTCCGTTACCAGAACTCGTTGC 1364
Query 1356 AGAGCCCACAGGCGCCCGTTCGATGTCTTTTGTTGGCACACACGAGTACTTAGCTCCAGA 1415
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1365 AGAGCCCACAGGCGCCCGTTCTATGTCTTTTGTTGGCACACACGAGTACTTAGCTCCAGA 1424
Query 1416 GATTATCAAAGGTGAAGGACATGGAAGCGCGGTTGATTGGTGGACTTTTGGGATCTTTCT 1475
||| ||||||||||||||||||||||| || |||||||||||||| ||||||||||||||
Sbjct 1425 GATCATCAAAGGTGAAGGACATGGAAGTGCAGTTGATTGGTGGACCTTTGGGATCTTTCT 1484
Query 1476 TTATGAATTATTGTTTGGTAAAACACCGTTTAAAGGGTCTGGAAATCGAGCTACGCTCTT 1535
||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 1485 TTATGAACTATTGTTTGGTAAAACACCGTTTAAAGGGTCAGGAAATCGAGCAACGCTCTT 1544
Query 1536 CAATGTGGTTGGTCAGCCTCTGAGATTCCCGGAATCTCCAGTTGTTAGCTTTGCAGCTAG 1595
||| ||||||||||||||||| |||||||| |||||||| ||||||||||| ||||||||
Sbjct 1545 CAACGTGGTTGGTCAGCCTCTTAGATTCCCTGAATCTCCGGTTGTTAGCTTCGCAGCTAG 1604
Query 1596 GGATTTGATAAGGAGTTTGCTTGTGAAGGAGCCACAACATAGATTAGCTTATAAGCGTGG 1655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1605 GGATTTGATAAGGAGTTTGCTTGTGAAGGAGCCACAACATAGATTAGCTTATAAGCGTGG 1664
Query 1656 AGCAACAGAGATAAAGCAACATCCTTTCTTTGAAGGAGTGAATTGGGCTCTGGTTCGATG 1715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1665 AGCAACAGAGATAAAGCAACATCCTTTCTTTGAAGGAGTGAATTGGGCTCTGGTTCGATG 1724
Query 1716 TGCCAGCCCACCGGAGATTCCTAAACCGGTTGATCTTGAACCGTTAAATCCTACTCCTGC 1775
|||||| ||||||||||||||||||||||||||||||||| | || |||||||||||| |
Sbjct 1725 TGCCAGTCCACCGGAGATTCCTAAACCGGTTGATCTTGAAGCTTTGAATCCTACTCCTAC 1784
Query 1776 TATGCC-GTCTGCCGCATCTTCGAGTGTGAGATCTGATCAGAGTAATTATCTTGAGTTCG 1834
| |||| | | ||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 1785 TGTGCCAG-CAGCCGCATCTTCGAGTGTAAGATCTGATCAGAGTAATTATCTTGAGTTTG 1843
Query 1835 ATTTCTTCTGAAGAAACTGTTTCCACAGTTGATGATTCTCATTATTGTTTCTTTGCAAAT 1894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1844 ATTTCTTCTGAAGAAACTGTTTCCACAGTTGATGATTCTCATTATTGTTTCTTTGCAAAT 1903
Query 1895 TCTGTTTAGTGTTTTCCACAAATGTGTTTCCtttttttG-TTCTTTTGAATTTTCACGTC 1953
|||||||||||||||| ||||||||||||| ||||||| ||||||| ||||||||||||
Sbjct 1904 TCTGTTTAGTGTTTTCTACAAATGTGTTTCTTTTTTTTTCTTCTTTTTAATTTTCACGTC 1963
Query 1954 TTG-AAAAAGTTATGAGATGTTTGTAATCATTCTTCAAAAATGTGAAACAGTCTCTGTAC 2012
||| ||||||||||||||| || |||||||||||||||| ||||| |||||||||||||
Sbjct 1964 TTGGAAAAAGTTATGAGAT-TT-GTAATCATTCTTCAAAGTTGTGAGACAGTCTCTGTAC 2021
Query 2013 CATCTTCTTGAGTTTATTAATGTTAGACAAGAACCATTGAGAA 2055
|||||||||||||||| | ||||||||| |||||||||||||
Sbjct 2022 CATCTTCTTGAGTTTA--A-TGTTAGACACGAACCATTGAGAA 2061
> AT4G26610.1 | Symbols: D6PKL1, AGC1-2 | D6 protein kinase like
1 | chr4:13424549-13427319 FORWARD LENGTH=2003
Length=2003
Score = 1279 bits (692), Expect = 0.0
Identities = 1228/1481 (83%), Gaps = 60/1481 (4%)
Strand=Plus/Plus
Query 386 ATTCCAGTCAAAGTATGTCAATCAACACTTTAGCAGATCAAGTATCTTCGAGTTTGTCTT 445
|||||||||||||| | ||| | |||||||| ||||||||||||||||| | ||||||||
Sbjct 431 ATTCCAGTCAAAGTGTCTCAGTAAACACTTTGGCAGATCAAGTATCTTCAACTTTGTCTT 490
Query 446 TCGCCGATCCAAGTAGTGATGGTAAAAC---CGGTAATAG-TAAGA-TCAACGAGCAAG- 499
| | | |||||| || || ||||||| ||| | || ||| | | || || |||
Sbjct 491 TTG-C--TCCAAGCAGCGACAGTAAAACTGGAGGTGA-AGTTAA-ATTTAATGA-AAAGT 544
Query 500 --G-TGAGAGTGGAAAGAGTAGCACTTGTAGACCGAGCACAAGCAGTGATATAAGCGATG 556
| | |||| || ||||||| ||| |||||||| ||||||||||||||||| || ||||
Sbjct 545 CTGATCAGAGCGGGAAGAGTAACACATGTAGACCAAGCACAAGCAGTGATATCAGTGATG 604
Query 557 AGAGCACTTGTAGCAGCTTTAGTAGCAGTATCAACAAACCTCACAAGGCTAATGATGTGA 616
||||||| ||||||||||||||| | ||| |||||| ||||||||||| ||||| ||||
Sbjct 605 AGAGCACATGTAGCAGCTTTAGT-G--GTAACAACAAGCCTCACAAGGCGAATGACGTGA 661
Query 617 GATGGGAAGCCATTCAAGCTGTTAGAACGAAACATGGTGGT-TTGGGTTTGAATCATTTT 675
|||||||||| ||||||||||| ||||||||||||| || ||||| ||||| ||||||
Sbjct 662 GATGGGAAGCAATTCAAGCTGTCCGAACGAAACATGG-CGTATTGGGGTTGAACCATTTT 720
Query 676 AGGCTCTTGAAGAGGTTAGGATGTGGAGATATTGGAACTGTTCATCTTGCTGAGTTAAAT 735
|||||||||||||||||||| ||||| ||||| |||||||| || ||||||||||| |
Sbjct 721 AGGCTCTTGAAGAGGTTAGGGTGTGGGGATATCGGAACTGTCCACCTTGCTGAGTTGCAC 780
Query 736 GGAACACGGTGTTATTTTGCGATGAAGGTTATGGATAAAACCGCTTTGGCTAGCCGGAAA 795
|||||| |||||| |||||| |||||||||||||| ||| |||||||||||||| |||
Sbjct 781 GGAACAAGGTGTTTTTTTGCAATGAAGGTTATGGACAAAGGGGCTTTGGCTAGCCGTAAA 840
Query 796 AAGCTTCTTAGGGCTCAAACTGAAAGAGAGATATTGCAGTGTCTTGATCACCCGTTTCTC 855
||||||||||| ||||| || || || |||||||||||||||||||| ||||| ||||||
Sbjct 841 AAGCTTCTTAGAGCTCAGACCGAGAGGGAGATATTGCAGTGTCTTGACCACCCTTTTCTC 900
Query 856 CCGACATTGTATAGTCATTTCGAGACTGAGAAGTTCTCTTGTTTGGTGATGGAGTTTTGT 915
|| || ||||||||||| |||||||||||||||||||| |||||||| |||||||| |||
Sbjct 901 CCAACTTTGTATAGTCACTTCGAGACTGAGAAGTTCTCATGTTTGGTTATGGAGTTCTGT 960
Query 916 CCTGGTGGTGATTTGCATACACTAAGGCAGAGACAACCCGGGAAACGCTTCACCGAGCAA 975
||||| ||||| |||||||| || | || ||||| |||||||| || || | || |||
Sbjct 961 CCTGGAGGTGACTTGCATACCCTTCGACAAAGACAGCCCGGGAAGCGATTTTCAGAACAA 1020
Query 976 GCAGCTAAGTTTTATGTAGCAGAAGTGCTTCTTGCGATGGAATATCTACACATGCTTGGG 1035
||||| |||||||||||||| ||||| |||||||| ||||||||||| || ||||||||
Sbjct 1021 GCAGCAAAGTTTTATGTAGCGGAAGTACTTCTTGCAATGGAATATCTTCATATGCTTGGC 1080
Query 1036 ATCATTTACCGTGATTTGAAA-CCCGAGAATGTTCTTGTGAGAGATGATGGACACGTGAT 1094
||||| ||||| ||| | ||| || |||||||||||||| |||||||||||||| |||||
Sbjct 1081 ATCATATACCGCGATCT-AAAGCCAGAGAATGTTCTTGTTAGAGATGATGGACATGTGAT 1139
Query 1095 GCTTTCGGATTTTGATCTCTCCCTGAGATGTACCGTGAGCCTCTCTA-TAGTCAGATCAG 1153
|||||| || || || |||||| |||||||||| || |||| | | | | |||||||||
Sbjct 1140 GCTTTCTGACTTCGACCTCTCCTTGAGATGTACTGTTAGCCCCAC-AGTGGTCAGATCAA 1198
Query 1154 CCAATGTCG-GATCTG-AGGGCTTGTCAAAGAATTCGGTTTCTTGCTCGCAACAACCTGC 1211
| | | | | |||| ||||| |||||| |||| || ||| | || ||||||||
Sbjct 1199 CTGTTCTTGCG-TCTGAAGGGC----AAAAGAACTCGGGTTATTG-T-GC-GCAACCTGC 1250
Query 1212 CTGCATCCAGCAACCATCTTGCATCTCAATGGCTCCAACATCTTGCTTCTCTCCTCGATT 1271
|||||||| || ||||||||||| || | ||||| ||| | ||||| ||||| || ||
Sbjct 1251 TTGCATCCAACAGCCATCTTGCATTTC--T-GCTCCTACAACATGCTTTTCTCCACG-TT 1306
Query 1272 -CTTCTCATCG-AAATCCAAGAAAGACAAGAAACCGAAAACCGAGAACGGGAACCACCAA 1329
|||||| | ||||||||||||||||||||| ||||| ||| ||| |||| ||||
Sbjct 1307 ATTTCTCA-AGTAAATCCAAGAAAGACAAGAAAATGAAAAACGA-AACTGGAA--ACCAG 1362
Query 1330 GTAACTCCGTTACCAGAACTCGTTGCAGAGCCCACAGGCGCCCGTTCGATGTCTTTTGTT 1389
|||| ||| || || || |||||||| ||||||||| | || || || ||||| ||||||
Sbjct 1363 GTAAGTCCATTGCCCGAGCTCGTTGCTGAGCCCACAAGTGCTCGCTCAATGTCATTTGTT 1422
Query 1390 GGCACACACGAGTACTTAGCTCCAGAGATTATCAAAGGTGAAGGACATGGAAGCGCGGTT 1449
|||||||| ||||| |||||||| ||||| |||||||||||||| ||||| || ||||||
Sbjct 1423 GGCACACATGAGTATTTAGCTCCTGAGATCATCAAAGGTGAAGGGCATGGGAGTGCGGTT 1482
Query 1450 GATTGGTGGACTTTTGGGATCTTTCTT-TATGAATTATTGTTTGGTAAAACACCGTTTAA 1508
|||||||||||||||||||||||| || ||||| |||||||||||||||| ||||||||
Sbjct 1483 GATTGGTGGACTTTTGGGATCTTT-TTGTATGAGCTATTGTTTGGTAAAACCCCGTTTAA 1541
Query 1509 AGGGTCTGGAAATCGAGCTACGCTCTTCAATGTGGTTGGTCAGCCTCTGAGATTCCCGGA 1568
|||||| ||||| ||||| || |||||||| || || |||||||||||| | ||||| ||
Sbjct 1542 AGGGTCAGGAAACCGAGCAACACTCTTCAACGTTGTGGGTCAGCCTCTGCGTTTCCCAGA 1601
Query 1569 ATCTCCAGTTGTTAGCTTTGCAGCTAGGGATTTGATAAGGAGTTTGCTTGTGAAGGAGCC 1628
|||||||||||| || ||||| |||||||||||||| |||||| |||||||||| |||||
Sbjct 1602 ATCTCCAGTTGTCAGTTTTGCTGCTAGGGATTTGATTAGGAGTCTGCTTGTGAAAGAGCC 1661
Query 1629 ACAACATAGATTAGCTTATAAGCGTGGAGCAACAGAGATAAAGCAACATCCTTTCTTTGA 1688
|| ||||||||||| ||||||||||| ||||| ||||| ||||||||||||||||||||
Sbjct 1662 TCAGCATAGATTAGCGTATAAGCGTGGTGCAACTGAGATGAAGCAACATCCTTTCTTTGA 1721
Query 1689 AGGAGTGAATTGGGC-TCTGGTTCGATGTGCCAGCCCACCGGAGATTCCTAAACCGGTTG 1747
||||||||||||||| | |||||||||| || |||||||| ||||| || ||||||||||
Sbjct 1722 AGGAGTGAATTGGGCAT-TGGTTCGATGCGCTAGCCCACCAGAGATACCAAAACCGGTTG 1780
Query 1748 ATCT-TGA-ACCGTTAAATCCTACTCCTGCTATGCCGTCTGCCGCATCTTCGAGTGTGA- 1804
|| | ||| | || ||| || || | | || | | ||| ||||| | ||||| |
Sbjct 1781 AT-TATGAGA--GTGCG--CCTGCTACTCC-A-GCAG-CAGCCACATCTACTAGTGTCAA 1832
Query 1805 GATCTGATCAGAGTAATTATCTTGAGTTCGATTTCTTCTGA 1845
| ||||| |||||||||||||| |||||||||||||| |||
Sbjct 1833 G-TCTGACCAGAGTAATTATCTGGAGTTCGATTTCTTTTGA 1872
> AT3G12690.1 | Symbols: AGC1.5 | AGC kinase 1.5 | chr3:4030447-4033332
REVERSE LENGTH=2193
Length=2193
Score = 176 bits (95), Expect = 7e-43
Identities = 290/382 (76%), Gaps = 22/382 (6%)
Strand=Plus/Plus
Query 1342 CCAGAACTCGTTGCAGAGCCCACAGGCGCCCGTTCGATGTCTTTTGTTGGCACACACGAG 1401
||||| ||| | |||||||| |||| | || || ||||| ||||| ||||||||||||
Sbjct 1493 CCAGAGCTCATGGCAGAGCCAACAGATGTGCGGTCAATGTCCTTTGTGGGCACACACGAG 1552
Query 1402 TACTTAGCTCCAGAGATTATCA-AAGGTGAAGGACATGGAAGCGCGGTTGATTGGTGGAC 1460
||| ||||||||||||| || | || || |||||||| ||||| || || ||||||||
Sbjct 1553 TACCTAGCTCCAGAGATCAT-ACGTGGCGAGGGACATGGCAGCGCTGTGGACTGGTGGAC 1611
Query 1461 TTTTGGGATCTTTCTTTATGAATTATTGTTTGGTAAAACACCGTTTAAAGGGTC-TGGAA 1519
|| |||||||| |||||||| | | ||| | || ||| || ||||| | ||||
Sbjct 1612 ATTCGGGATCTTCCTTTATGAGCTCCTCCATGGGACCACCCCG-TTCAAGGGGCAGGGAA 1670
Query 1520 ATC-GAGCTACGCT-CTTCAATGTGGTTGGTCAGCCTCTG-AGATTCCCGGAAT-CTCCA 1575
| | |||| ||| | | ||||||||| |||||||| ||| || ||||||| || | ||
Sbjct 1671 A-CAGAGCCACGTTGC-ACAATGTGGTGGGTCAGCCGCTGAAG-TTCCCGG-ATAC-CCC 1725
Query 1576 G-TTGTTAGCTTTGCAGCTA-GGGATTTGATAAG-GAGTTTGCTTGTGAAGGAGCCACAA 1632
| ||| |||| || || | | ||| | || | | | | || |||||||| |||| |
Sbjct 1726 GCATGTGAGCTCAGCGGC-ACGTGATCTCATCCGCG-GACTACTAGTGAAGGATCCAC-A 1782
Query 1633 CA-TA-GATTAGCTTATAAGCGTGGAGCAACAGAGATAAAGCAACATCCTTTCTTTGAAG 1690
|| | || | ||||| | | | || || ||||||||||||||||| |||||||||||||
Sbjct 1783 CAGAAGGA-TCGCTTACACGAGGGGGGCCACAGAGATAAAGCAACACCCTTTCTTTGAAG 1841
Query 1691 GAGTGAATTGGGCTCTGGTTCG 1712
|||||||||||||||| |||||
Sbjct 1842 GAGTGAATTGGGCTCTAGTTCG 1863
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 101856905805
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5