BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg495674
Length=2331
Score E
Sequences producing significant alignments: (Bits) Value
AT5G55920.1 | Symbols: OLI2 | S-adenosyl-L-methionine-dependent... 2939 0.0
AT4G26600.1 | Symbols: | S-adenosyl-L-methionine-dependent met... 1262 0.0
> AT5G55920.1 | Symbols: OLI2 | S-adenosyl-L-methionine-dependent
methyltransferases superfamily protein | chr5:22645483-22649447
REVERSE LENGTH=2372
Length=2372
Score = 2939 bits (1591), Expect = 0.0
Identities = 1936/2093 (92%), Gaps = 61/2093 (3%)
Strand=Plus/Plus
Query 269 GATGAAGATGCTCTTTCTACAGATGAAGAATCAGAAGAGCTTGATGAATCTGATGATGGA 328
|||||||||| | ||||| ||| || |||||||||||| ||||||||||||||||||||
Sbjct 311 GATGAAGATGATATTTCTCCAGCTGTGGAATCAGAAGAGATTGATGAATCTGATGATGGA 370
Query 329 GAGAAAGAGTCTAATGC-GTTATTCTCTGATGATGATGGTGAGGAGGAGGAGGAAGAGAA 387
||||| | ||||||| | ||||||||| |||||| | |||||||||||
Sbjct 371 GAGAACGGGTCTAAT-CAGTTATTCTC---TGATGA---T---------GAGGAAGAGAA 414
Query 388 CGATGACTATGAAGAGACTTTGGGTGACGATTTTCTAGAAGGTAGCGGCGATGAAGACGA 447
| | ||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 415 C---G---ATGAAGAGACTTTGGGTGACGATTTTCTAGAAGGTAGCGGCGATGAAGATGA 468
Query 448 GGAAGAACCTTCAGATGCGGA-T----T-CTGACTCTGATGACAACGATATTGTGAG-GA 500
||||| | ||| ||||||||| | | |||||||||| ||| ||||||||||| | ||
Sbjct 469 GGAAGGATCTTTAGATGCGGATTCGGATGCTGACTCTGACGACGACGATATTGTG-GCGA 527
Query 501 AATCTGATGCTATTGATAGACAATTAGCACA-GGATAAGAAAGACGCTGCTGCTGAAGTG 559
|||||||||||||||||||| | |||||| | | | |||||||| |||||||||||| ||
Sbjct 528 AATCTGATGCTATTGATAGAGACTTAGCA-ATGCAGAAGAAAGATGCTGCTGCTGAACTG 586
Query 560 CG-GGATAATATCAAGCAAGACG--G-ACCTGATGAAGAACTTGAACATGATGCGTTTCG 615
| |||| |||||||||||| | | || ||||||||||| |||||||||||||||| |
Sbjct 587 -GAGGATTTTATCAAGCAAGATGATGTACATGATGAAGAACCTGAACATGATGCGTTTAG 645
Query 616 GCTACCAACTGAAGAGGAGCTTGAAGAAGAAGCTCGTGGTCCACCAGATCTTCCTCTACT 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 646 GCTACCAACTGAAGAGGAGCTTGAAGAAGAAGCTCGTGGTCCACCAGATCTTCCTCTACT 705
Query 676 TAAGAGTAGAATTGAAGAGATTGTTAGAGCTCTGAACAATTTCAAGGCTTTCAGGCCAAA 735
||||| ||||||||||||||||||||||||||| || ||||| |||||||||||||||||
Sbjct 706 TAAGACTAGAATTGAAGAGATTGTTAGAGCTCTTAAAAATTTTAAGGCTTTCAGGCCAAA 765
Query 736 AGATACCACGAGGAAAGCTTGTGTTGACCAGCTCAAAGCTGATCTTGGTTCTTATTATGG 795
||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct 766 AGACACCACGAGGAAAGCTTGTGTTGAACAGCTCAAAGCTGATCTCGGTTCTTATTATGG 825
Query 796 TTATAACAGTTTTCTTATTGGAACTTTGGTTGAGATGTTTCCTCCTGGTGAACTTATGGA 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 826 TTATAACAGTTTTCTTATTGGAACTTTGGTTGAGATGTTTCCTCCTGGTGAACTTATGGA 885
Query 856 ACTTATTGAAGCTTTTGAAAAGCAAAGGCCTACATCTATCCGGACTAACACACTTAAGAC 915
||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||
Sbjct 886 ACTTATTGAAGCTTTTGAAAAGCAAAGGCCTACGTCCATCCGAACTAACACACTTAAGAC 945
Query 916 TCGTAGACGGGATCTTGCTGATGTACTTTTGAACAGAGGAGTCAATCTAGACCCATTAAG 975
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 946 TCGAAGACGGGATCTTGCTGATGTACTTTTGAACAGAGGAGTCAATCTAGACCCATTAAG 1005
Query 976 CAAGTGGTCAAAAGTTGGACTTGTTATCTATGATTCACAAGTCCCAATCGGTGCGACTCC 1035
||||||||| ||||||||||||||||| |||||||||||||||||||| ||||| |||||
Sbjct 1006 CAAGTGGTCTAAAGTTGGACTTGTTATTTATGATTCACAAGTCCCAATTGGTGCAACTCC 1065
Query 1036 TGAATACT-TGGCTGGTTACTACATGCTTCAAGGTGCTAGTTCGTTTTTGCCAGTGATGG 1094
|||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1066 TGAATA-TCTGGCTGGGTACTACATGCTTCAAGGTGCTAGTTCGTTTTTGCCAGTGATGG 1124
Query 1095 CCCTTGCCCCTCGAGAGAATGAACGGATTGTGGATGTAGCTGCTGCTCCTGGTGGTAAAA 1154
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1125 CCCTTGCCCCTCGAGAGAATGAGCGGATTGTGGATGTAGCTGCTGCTCCTGGTGGTAAAA 1184
Query 1155 CAACTTATATCGCTGCTCTAATGAAAAATACGGGCTTAATATATGCGAATGAGATGAAAG 1214
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CAACTTATATCGCCGCTCTAATGAAAAATACGGGCTTAATATATGCGAATGAGATGAAAG 1244
Query 1215 TACCTAGGCTTAAGTCGCTAACTGCCAATCTGCATCGCATGGGGGTCACAAATACCATAG 1274
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1245 TACCTAGGCTTAAGTCGCTAACTGCCAATCTGCATCGTATGGGGGTCACAAATACCATAG 1304
Query 1275 TTTGTAACTATGATGGAAGAGAGCTACCCAAGGTTTTAGGTCAGAACACGGTTGATAGAG 1334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1305 TTTGTAACTATGATGGAAGAGAGCTACCCAAGGTTTTAGGTCAGAACACGGTTGATAGAG 1364
Query 1335 TATTGTTGGATGCGCCTTGCAGTGGGACTGGAATCATATCAAAAGATGAATCAGTTAAAA 1394
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1365 TATTGTTGGATGCGCCTTGCAGTGGGACTGGAATTATATCAAAAGATGAATCAGTTAAAA 1424
Query 1395 TAACGAAAACCGTTGATGAGATAAAGAAATTTGCTCACTTGCAAAAGCAACTAT-TACTC 1453
||||||||||| | |||||||||||||||||||||||||||||||||||||| | |||||
Sbjct 1425 TAACGAAAACCATGGATGAGATAAAGAAATTTGCTCACTTGCAAAAGCAACT-TCTACTC 1483
Query 1454 GCTGCTATTGATATGGTGGACGCCAATTCCAAAACCGGTGGATATGTAGTTTATTCAACA 1513
|||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct 1484 GCTGCTATTGATATGGTGGATGCCAATTCCAAAACCGGTGGATATATAGTTTATTCAACA 1543
Query 1514 TGTTCAATTATGGTTACCGAGAACGAAGCTGTCATTGACTATGCTCTTAAAAAGAGGGAT 1573
||||||||||||||||| ||||| ||||| |||||||||||||| || ||||||||||||
Sbjct 1544 TGTTCAATTATGGTTACTGAGAATGAAGCCGTCATTGACTATGCCCTCAAAAAGAGGGAT 1603
Query 1574 GTTAAACTCGTTACATGTGGACTCGATTTTGGCAGAAAAGGATTTACCAGATTTAGAGAA 1633
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1604 GTTAAACTCGTTACGTGTGGTCTCGATTTTGGCAGAAAAGGATTTACCAGATTTAGAGAA 1663
Query 1634 CACCGGTTTCAGCCTTCTTTAGACAAGACTAGACGTTTCTATCCTCATGTACACAACATG 1693
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1664 CACCGGTTTCAGCCATCTTTGGACAAGACTAGACGTTTCTATCCTCATGTACACAACATG 1723
Query 1694 GACGGATTTTTTGTGGCGAAGCTGAAGAAAATGAGCAACATGAAGCAATATTCAGAAG-- 1751
||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||
Sbjct 1724 GACGGATTTTTTGTGGCAAAGCTGAAGAAAATGAGCAACGTGAAGCAATCTTCAGAAGAA 1783
Query 1752 G-TGATGATGAGGCGGTAGAAACTGTAGAGCAAGCTGAAGTGTCTAGtgatgatgatgat 1810
| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1784 GGTGATGATGATGCGGTAGAAACTGTAGAGCAAGCTGAAGTGTCTAGTGATGATGATGAT 1843
Query 1811 gatgaAGCTGAGGCCATTGAAGAGATTGAGAAGCCTTCTGTTCCTGATAGGCAACCTAAG 1870
|| | ||||||||||||||||||| ||||||||||||||||| | |||||||||||||
Sbjct 1844 GA--A-GCTGAGGCCATTGAAGAGACGGAGAAGCCTTCTGTTCCCGTTAGGCAACCTAAG 1900
Query 1871 Gaaacaaaagaaaaaaagaacaaggaaagacttgcaaaatcaaaggagcacaagagaggt 1930
|||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct 1901 GAAAGAAAAGAAAAAAAGAACAAGGAAAAACTTGCAAAATCAAAGGAGGACAAGAGAGGT 1960
Query 1931 aaaaaGGATAAGAAAGCAAAATCTGAAAATGTGGAAGAGCCATCTAAAGCAAGGAAGCAA 1990
||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1961 AAAAAGGATAAGAAATCAAAATCTGAAAATGTGGAAGAGCCATCTAAACCAAGGAAGCAA 2020
Query 1991 AAGAAGAAGAGATCTG-AATGGAAGAACGAAATTGCTCAAGCTAGGGAAGAGAAAAGAAT 2049
|||||||||||| | | |||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2021 AAGAAGAAGAGA-CGGGAATGGAAGAACGAAATAGCTCAAGCTAGGGAAGAGAAAAGAAT 2079
Query 2050 AGCCATGCGAGAGAAGGTGAAGGAGGAGAAGCAATGAT--T-CAGTGTTTTTGCATCAAA 2106
||||||||| ||||||| ||||||||||||| |||||| | |||||||||| |||||||
Sbjct 2080 AGCCATGCGGGAGAAGGCGAAGGAGGAGAAGTAATGATGATTCAGTGTTTTTTCATCAAA 2139
Query 2107 GAGAAGAGAC--CATTTGCGAAAACACTATCATCTATGCTTATAGTAGGCTTGTGCCATG 2164
||||||| | ||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 2140 GAGAAGAAAAAACATTTGCGAAAACGTTATCATCTATGGTTATAGTAGGCTTGTGCCATA 2199
Query 2165 TATTGGCTTTGTTGTTTTTGTTTATTCACGAC-A-ATTTGTGCAACATTAAAAGCAGCCA 2222
|||||||||| ||||||||||||||||||||| | ||||||||||| ||||||||| |||
Sbjct 2200 TATTGGCTTTCTTGTTTTTGTTTATTCACGACGAGATTTGTGCAACGTTAAAAGCACCCA 2259
Query 2223 GAGTGAACACTCTGTTGGACTCCATGGACAGGCC---TTAAATGTCCAAAAGTTTTGTTT 2279
|||||| |||||||||||||||| ||| ||| || |||||||||||||||||||||||
Sbjct 2260 GAGTGAGCACTCTGTTGGACTCCGTGGGCAGACCACCTTAAATGTCCAAAAGTTTTGTTT 2319
Query 2280 CAGaaaaaaaTCTTTCAAGAGTATCAA-GTTAAATTGTGATCTTGAGCCGATC 2331
||||||||||||||| ||||| ||||| ||||| ||||| |||||||||||||
Sbjct 2320 CAGAAAAAAATCTTTTAAGAGAATCAAAGTTAAGTTGTGTTCTTGAGCCGATC 2372
Score = 327 bits (177), Expect = 2e-88
Identities = 240/268 (90%), Gaps = 14/268 (5%)
Strand=Plus/Plus
Query 1 TCTTCTACTTCTTCTGTTAAACCCTGGCCGCGCGAGAAAACCCTAATTCAAACCTGTAGC 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4 TCTTCTACTTCTTCTCTTAAACCCTGGCCGCGCGAGAAAACCCTAATTCAAACCTGTAGC 63
Query 61 CATGCCTGCTCTCACTCGTAACAAGAAGAAAGCTGCGACGAAATCGCA-AACCCCTCCAA 119
||||||||| |||||||||||||||||||| ||||||||||||||| | |||||||||||
Sbjct 64 CATGCCTGCCCTCACTCGTAACAAGAAGAAGGCTGCGACGAAATCG-ATAACCCCTCCAA 122
Query 120 CGAAGCAGGTTACCAAATCCAAAGCTCCTCCATCGAAGATTCAGTCGAAACCCCAATCTT 179
|||||||| |||||||||||||| | |||||| | | | ||||||||| |||
Sbjct 123 CGAAGCAGCTTACCAAATCCAAAACCCCTCCA---A---T---G---AAACCCCAAACTT 170
Query 180 CGACGTTGAAGAACGGAGCGAAATCCCAGAACAAACCTCCATTGAAGAAGCAGAAGAAGG 239
| | ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 171 CAATGTTGAAGAAAGGAGCGAAATCTCAGAACAAACCTCCATTGAAGAAGCAGAAGAAGG 230
Query 240 AAATTGTCGAGGAAGAGCCTCTCGAAGA 267
|| |||| |||||||||||||| |||||
Sbjct 231 AAGTTGTGGAGGAAGAGCCTCTAGAAGA 258
> AT4G26600.1 | Symbols: | S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein | chr4:13419567-13423790
FORWARD LENGTH=2450
Length=2450
Score = 1262 bits (683), Expect = 0.0
Identities = 1262/1528 (83%), Gaps = 94/1528 (6%)
Strand=Plus/Plus
Query 600 AACATGATGCGTTTCGGCTACCAACTGAAGAGGAGCTTGAAGAAGAAGCTCGT-GGTCCA 658
||| ||||| ||||| ||||||||| || |||| ||||||||||| || ||| || ||
Sbjct 571 AACCTGATGAGTTTCAGCTACCAACCCAAAAGGAACTTGAAGAAGAGGCACGTCGG-CCG 629
Query 659 CCAGATCTTCCTCTA-CTT---AA-GAGTAGAATTGAAGAGATTGTTAG-AGCTCTGAAC 712
||||||||| | ||| ||| || ||| | || | |||||||||||| | | ||| |
Sbjct 630 CCAGATCTT-C-CTAGCTTGCAAATGAGGATAA--G-AGAGATTGTTAGAATC-CTG-TC 682
Query 713 -AATTTCAAGG-CTTTCAGGCCAAAA-GATAC---CAC--GAGGAAAGCTTGTGTT-GAC 763
||||| |||| | || | ||||||| || || ||| |||||| | || |||| ||
Sbjct 683 GAATTTTAAGGAC-TTGAAGCCAAAAGGAGACAAGCACGAGAGGAATGATTATGTTGGA- 740
Query 764 CAGCTCAAAGCTGATCTTGGTTCTTATTATGGTTATAA-CAGTTTTCTTATTGGAACTTT 822
||||| |||||||||||| ||||||| || || ||||| || |||||||||||||||||
Sbjct 741 CAGCTTAAAGCTGATCTTAGTTCTTACTACGGCTATAATGAG-TTTCTTATTGGAACTTT 799
Query 823 GGTTGAGATGTTTCCTCCTGGTGAACTTATGGAACTTATTGAAGCTTTTGAAAAGCAAAG 882
|||||||||||||| || |||||| |||||||| || ||||||||||||||| ||||
Sbjct 800 AATTGAGATGTTTCCTGTTGTTGAACTCATGGAACTAATCGAAGCTTTTGAAAAGAAAAG 859
Query 883 GCCTACATCTATCCGGACTAACACACTTAAGACTCGTAGACGGGATCTTGCTGATGTACT 942
||||||||||| || |||||||| ||||||||||| ||||||||||| |||||| ||||
Sbjct 860 ACCTACATCTATACGTACTAACACTCTTAAGACTCGAAGACGGGATCTGGCTGATATACT 919
Query 943 TTTGAACAGAGGAGTCAATCTAGACCCATTAAGCAAGTGGTCAAAAGTTGGACTTGTTAT 1002
||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |
Sbjct 920 TTTGAACAGAGGAGTTAATCTAGACCCATTAAGCAAGTGGTCAAAAGTTGGACTTATCGT 979
Query 1003 CTATGATTCACAAGTCCCAATCGGTGCGACTCCTGAATACTTGGCTGG-TTACTACATGC 1061
|||||||||||||| || || ||||| ||||||||||| ||||| || || ||| |||
Sbjct 980 TTATGATTCACAAGTTCCGATTGGTGCAACTCCTGAATATTTGGCAGGATT-CTATATG- 1037
Query 1062 TT-CAAGGTGCTAGTTCGTTTTTGCCAGTGATGGCCCTTGCCCCTCGAGAGAATGAACG- 1119
|| ||| ||||||||||||| |||||||||||||||||||| |||||||| || |||||
Sbjct 1038 TTGCAAAGTGCTAGTTCGTTCTTGCCAGTGATGGCCCTTGCTCCTCGAGAAAAAGAACGA 1097
Query 1120 GATTGTGGATGTAGCTGCTGCTCCTGGTGGTAAAACAACTTATATCGCTGCTCTAATGAA 1179
| ||||||| | |||||||| ||||||||||||||||| ||| | ||||| ||||||||
Sbjct 1098 G-TTGTGGACATGGCTGCTGCCCCTGGTGGTAAAACAACATATGTTGCTGCACTAATGAA 1156
Query 1180 AAATACGGGCTTAATATATGCGAATGAGATGAAAGTACCTAGGCTTAAGTCGCTAACTGC 1239
|||||| ||| |||||||||| || |||||||||||||||||||||||||| || ||||
Sbjct 1157 AAATACAGGCATAATATATGCAAACGAGATGAAAGTACCTAGGCTTAAGTCACTTTCTGC 1216
Query 1240 CAATCTGCATCGCATGGGGGTCACAAATACCATAGTTTGTAACTATGATGGAAGAGAGCT 1299
|||||| ||||||||||| || |||||||||||||||||||||||||| ||| |||||||
Sbjct 1217 CAATCTACATCGCATGGGAGTGACAAATACCATAGTTTGTAACTATGACGGACGAGAGCT 1276
Query 1300 ACCCAAGGTTTTAGGTCAGAACACGGTTGATAGAGTATTGTTGGATGCGCCTTGCAGTGG 1359
| |||| ||||||||||||| | ||||||||||||||||| ||||||| || ||||||||
Sbjct 1277 AACCAAAGTTTTAGGTCAGAGCTCGGTTGATAGAGTATTGCTGGATGCTCCCTGCAGTGG 1336
Query 1360 GACTGGAATCATATCAAAAGATGAATCAGTTAAAA-TAACGAAAACCGTTGATGAGATAA 1418
|||||| | ||||||||||| ||||||||||||| | | |||| | |||||| ||||
Sbjct 1337 AACTGGAGTTATATCAAAAGACGAATCAGTTAAAACTTCC-AAAAGTGCTGATGACATAA 1395
Query 1419 AGAAATTTGCTCACTTGCAAAAGCAACT-ATTACTCGCTGCTATTGATATGGTGGACGCC 1477
|||||||||| || |||||||||||||| || ||| | ||| |||||| |||| ||||||
Sbjct 1396 AGAAATTTGCCCATTTGCAAAAGCAACTTAT-ACTTGGTGCGATTGATTTGGTAGACGCC 1454
Query 1478 AATTCCAAAACCGGTGGATATGTAGTTTATTCAACATGTTCAATTATGGTTACC-GAGAA 1536
||||||||||||||||||||| | ||||| |||||||||||| ||||| | ||| |||||
Sbjct 1455 AATTCCAAAACCGGTGGATATATTGTTTACTCAACATGTTCAGTTATGAT-ACCCGAGAA 1513
Query 1537 CGAAGCTGTCATTGACTATGCTCTTAAAAAGAGGGATGTTAAACTCGTTACATGTGGACT 1596
|||||||||||| || |||||||| ||||| |||||||||||||||||| ||||||||||
Sbjct 1514 CGAAGCTGTCATCGATTATGCTCTGAAAAACAGGGATGTTAAACTCGTTCCATGTGGACT 1573
Query 1597 CGATTTTGGCAGAAAAGGATTTACCAGATTTAGAGAACACCGGTTTCAGCCTTCTTTAGA 1656
||||||||| || |||||||| ||| ||||||||||||||||| || |||||||||||
Sbjct 1574 TGATTTTGGCCGACCAGGATTTAGCAGTTTTAGAGAACACCGGTTCCACCCTTCTTTAGA 1633
Query 1657 CAAGACTAGACGTTTCTATCCTCATGTACACAACATGGACGGATTTTTTGTGGCGAAGCT 1716
||||||||||||||||||||||| || ||||||||||| ||||| ||||| || |||||
Sbjct 1634 GAAGACTAGACGTTTCTATCCTCACGTGCACAACATGGATGGATTCTTTGTTGCAAAGCT 1693
Query 1717 GAAGAAAATGAGCAACATG-AA-GCAATATTCAG-AAGGTGATGATG--AGGCGGTAGA- 1770
|||||| |||||||| || || ||| ||||| || |||||| | || | ||| |
Sbjct 1694 GAAGAAGATGAGCAA--TGCAATGCAGCCTTCAGGAAA-TGATGA-GCCAG-CTGTA-AC 1747
Query 1771 AACTGTAGAGCAAGCTGAAGTGTC-T--AGtgatgatgatgatgatgaA-GCTGAGGCCA 1826
|| || ||||||||| | ||||| | ||||||||||||||||| ||| ||||||||||
Sbjct 1748 AA-TG--GAGCAAGCTCAGGTGTCGTCTAGTGATGATGATGATGA-GAAAGCTGAGGCCA 1803
Query 1827 TTGAAGAGATTG-AGAAGCCTTCTGTT-CCTGATAGGCAACCTAAG-Gaaaca--aa-ag 1880
|||| ||| ||| ||||||| ||||| || | | ||||||| ||| || | | || |
Sbjct 1804 TTGAGGAG-TTGGAGAAGCCACCTGTTGCCAG-TGGGCAACCCAAGAGAGAGAGTAACAC 1861
Query 1881 -aaa-aa-a-a-gaacaag-gaaagacttgcaaaatcaaaggag---cacaagagaggta 1931
||| || | | |||||| |||| | | ||| |||||||| ||||| || | |
Sbjct 1862 TAAAGAAGACACGAACAAACGAAAAAATC-CAAGGTCAAAGGAAATTCACAA-AG-GC-A 1917
Query 1932 aaaaGGA-TAAGAA-AGCAAAATCTGAAAATGTGG-AA-GAGCCATCTAAAGCAAGGAAG 1987
||| ||| ||| || | ||||| | |||| |||| || | | | || || |||||
Sbjct 1918 AAA-GGAATAAAAACA-CAAAAACCGAAA--GTGGTAATGTGGAAG--AACCCA-GGAAG 1970
Query 1988 CAAAAGAAGAAGAGATCTGAATGGAAGAACGAAATTGCTCAAGCTAGGGAAGAGAAAAGA 2047
||||||||||||||||| |||||||||| || |||||||||||||||||||| ||||||
Sbjct 1971 CAAAAGAAGAAGAGATCACAATGGAAGAATGAGATTGCTCAAGCTAGGGAAGAAAAAAGA 2030
Query 2048 ATAGCCATGCGAGAGAAGG-TGAAGGAG 2074
| | ||||| ||||||| | | ||||||
Sbjct 2031 AAAACCATGAGAGAGAATGCT-AAGGAG 2057
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 115712256225
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5