BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg495675
Length=2768
Score E
Sequences producing significant alignments: (Bits) Value
AT5G55930.1 | Symbols: ATOPT1, OPT1 | oligopeptide transporter ... 4289 0.0
AT4G26590.1 | Symbols: ATOPT5, OPT5 | oligopeptide transporter ... 1605 0.0
> AT5G55930.1 | Symbols: ATOPT1, OPT1 | oligopeptide transporter
1 | chr5:22652715-22656106 FORWARD LENGTH=2820
Length=2820
Score = 4289 bits (2322), Expect = 0.0
Identities = 2620/2763 (95%), Gaps = 23/2763 (1%)
Strand=Plus/Plus
Query 21 TGTCTAAAGTCTATATATGAAGTC-AATCCACGCACAAATGCTTCTGGGCTGAAAACGTT 79
|||| ||||||||||||||||||| ||| || | |||||||||||| |||| ||||||||
Sbjct 66 TGTCGAAAGTCTATATATGAAGTCAAATTCATGAACAAATGCTTCTAGGCTAAAAACGTT 125
Query 80 ATCGTAATCTTTAATTTTCAGGCTCCCTTT-TAAAATTCCGACTGGTTACCGAGGGCTAG 138
||||||||||||||| |||||||| | ||| |||||||||||||||||||||||||||||
Sbjct 126 ATCGTAATCTTTAATCTTCAGGCTTCTTTTCTAAAATTCCGACTGGTTACCGAGGGCTAG 185
Query 139 AAAATCCGGTCACCGTCGCCGGAGACAACCTCGAG-TTCT-AACCAAACCATCGTGAAGG 196
||||||||||||||||||||||||||||||||| | |||| ||| |||||||||||||||
Sbjct 186 AAAATCCGGTCACCGTCGCCGGAGACAACCTCG-GTTTCTAAACGAAACCATCGTGAAGG 244
Query 197 ACGGAAAAAAGGAGCTTGAAGACATAACAATGACGAGCGTTTTCGATGAACCTAAACCCT 256
|||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||
Sbjct 245 ACGGAAAAAAGGAGCTTGAAGACAAAACAATGACGAGCGTTTTCGACGAACATAAACCCT 304
Query 257 CCGACGATTCTCACGAGTCCAAGATCGTAATCAATGCAGGAGAAGAAGAAAAGGAGGAGG 316
|||| || |||||||||||||||||||| ||||||| || |||||| | ||||||||
Sbjct 305 CCGATGACTCTCACGAGTCCAAGATCGTCATCAATGGAGAAGAAGAGGTGTTGGAGGAGG 364
Query 317 AGAATGATAATCCGATTGAAGAAGTCCGGTTAACGGTACCGATAACCGACGATCCAACAC 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 365 AGAATGATAATCCGATTGAAGAAGTCCGGTTAACGGTACCGATAACCGACGATCCAACAC 424
Query 377 TGCCGGTTCTAACATTTCGAACATGGTTTCTTGGACTTCTCTCTTGCATCTTGCTTGCTT 436
| ||||| ||||| |||||||||||| |||||||||| |||||||||| |||||||| |
Sbjct 425 TACCGGTGCTAACGTTTCGAACATGGACTCTTGGACTTTTCTCTTGCATATTGCTTGCCT 484
Query 437 TCGTGAACCAGTTCTTCAGTTTCCGGTCGAACCAGCTTTGGGTATCTTCAGTTGCTGCGC 496
|||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |
Sbjct 485 TCGTGAACCAGTTCTTTGGTTTCCGGTCGAACCAGCTTTGGGTATCTTCAGTTGCGGCAC 544
Query 497 AGATCGTGACCCTCCCGCTGGGGAAACTCATGGCGAAGACGCTACCGACCAAGAAATTCG 556
||||||||||||| ||||| |||||||||||||| |||||||||||||| |||||||| |
Sbjct 545 AGATCGTGACCCTTCCGCTAGGGAAACTCATGGCAAAGACGCTACCGACAAAGAAATTTG 604
Query 557 GGTTTCCTGGGACGAATTGGTCGTGGTCATTGAACCCTGGTCCGTTCAATATGAAAGAAC 616
||||||| |||||||||||||||||||| || ||||||||||||||||||||||| ||||
Sbjct 605 GGTTTCCCGGGACGAATTGGTCGTGGTCTTTTAACCCTGGTCCGTTCAATATGAAGGAAC 664
Query 617 ATGTTCTTATTACAATATTTGCTAATACCGGAGCTGGAGGAGTTTACGCCACAAGTATTA 676
||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||
Sbjct 665 ATGTTCTTATTACAATATTTGCTAACACCGGAGCTGGTGGAGTTTACGCCACCAGTATTA 724
Query 677 TTACCATTGTTAAAGCTTTTTACAACCGTCAACTCAATGTCGCCGCCGCGATGTTGCTCA 736
|||||||||||||||| ||||| || |||||||| |||||||||||||| ||||||||||
Sbjct 725 TTACCATTGTTAAAGCGTTTTATAATCGTCAACTTAATGTCGCCGCCGCCATGTTGCTCA 784
Query 737 CACAAACCACTCAGTTGTTGGGATATGGATGGGCTGGAATTTTCAGGAAGTTCCTTGTGG 796
| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 785 CTCAAACCACTCAGTTGTTGGGATATGGATGGGCTGGAATCTTCAGGAAGTTCCTTGTGG 844
Query 797 ATTCACCGTATATGTGGTGGCCGTCAAATCTGGTTCAAGTCTCACTGTTTAGAGCTTTAC 856
||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||
Sbjct 845 ATTCACCGTATATGTGGTGGCCGTCAAATTTGGTTCAAGTCTCACTCTTTAGAGCTTTAC 904
Query 857 ATGAGAAGGAGGATCTACAAAAAGGGCAACAAACAAGGTTTAGATTCTTCATCATTGTCT 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 905 ATGAGAAGGAGGATCTACAAAAAGGGCAACAAACAAGGTTTAGATTCTTCATCATTGTCT 964
Query 917 TCGGCGTGAGCTTTGCTTACTACATAATCCCCGGCTACCTTTTCCCTTCCATCTCCGCGA 976
|| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 965 TCTGTGTGAGCTTTGCTTACTACATAATCCCCGGCTACCTTTTCCCTTCCATTTCCGCAA 1024
Query 977 TTTCATTTGTTTGCTGGATTTGGAAAAGCTCAGTGACCGCTCAGATTGTCGGTTCGGGGC 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1025 TTTCATTTGTTTGCTGGATTTGGAAAAGCTCAGTGACCGCTCAGATTGTCGGTTCTGGGC 1084
Query 1037 TCAAGGGTTTAGGAATTGGTTCGTTTGGTCTTGACTGGTCCACAGTTGCTGGTTTCTTAG 1096
||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1085 TCAAGGGTTTAGGTATTGGTTCGTTCGGTCTTGACTGGTCCACAGTTGCTGGTTTCTTAG 1144
Query 1097 GCAGTCCATTGGCTGTACCATTCTTCGCCATTGCCAACTTCTTTGGCGGATTCTTCATCT 1156
||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct 1145 GCAGTCCGTTGGCTGTACCATTCTTCGCCATTGCCAATTTCTTTGGAGGATTCTTCATCT 1204
Query 1157 TTTTATACATTGTTCTGCCTATCTTCTACTGGACTAATGCTTATGATGCACAGAAGTTTC 1216
|||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1205 TTTTATACATTGTTCTACCTATCTTCTACTGGACTAATGCTTATGATGCTCAGAAGTTTC 1264
Query 1217 CGTTCTATACTTCACACACCTTTGATCAGACTGGACACACCTATAACATTACCCGTATCC 1276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1265 CGTTCTATACTTCACACACCTTTGATCAGACTGGACACACCTATAACATTACCCGTATCC 1324
Query 1277 TCAATGAGAAGAATTTTGATATCAATCTAGACGCTTACAACGGTTACAGCAAGCTCTATT 1336
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1325 TCAATGAGAAGAATTTCGATATCAATCTAGACGCTTACAACGGTTACAGCAAGCTCTATT 1384
Query 1337 TGAGTGTGATGTTCGCGTTGCTCTATGGACTCAGCTTCGGTTCTCTTTTCGCTACCATCT 1396
||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct 1385 TGAGTGTGATGTTCGCGTTGCTCTATGGACTCAGCTTTGGTTCTCTTTGCGCTACCATCT 1444
Query 1397 CTCATGTCGCCCTCTATGATGGAAAGTTTATATGGGGAATGTGGAAGAAGGCAAAAACAG 1456
||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1445 CTCATGTTGCCCTCTATGATGGAAAGTTTATATGGGGAATGTGGAAGAAGGCAAAGACAG 1504
Query 1457 CAACAAAGGACAAGTACGGAGATGTGCATTCGAGATTAATGAAGAAGAATTATCAGTCAG 1516
||||||||||||||||||| || |||||||||||||| ||||||||||||||||| ||||
Sbjct 1505 CAACAAAGGACAAGTACGGTGACGTGCATTCGAGATTGATGAAGAAGAATTATCAATCAG 1564
Query 1517 TACCTCAATGGTGGTTCATCGTAGTTCTAGTTATTTCCTTTGCTTTCGCACTCTATGCTT 1576
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1565 TACCTCAATGGTGGTTCATCGCAGTTCTAGTTATTTCCTTTGCTTTCGCACTCTATGCTT 1624
Query 1577 GTGAAGGCTTTGACAAACAGCTTCAGCTTCCATGGTGGGGACTTATACTCGCGTGCGCCA 1636
| || ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 1625 GCGAGGGCTTTGACAAACAGCTTCAGCTCCCATGGTGGGGACTTATACTCGCTTGCGCCA 1684
Query 1637 TCGCCTTGTTCTTCACATTGCCTATCGGAGTTATCCAAGCAACTACGAACCAGCAAATGG 1696
|||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct 1685 TCGCTTTGTTCTTCACATTACCTATCGGAGTTATCCAAGCAACTACTAACCAGCAAATGG 1744
Query 1697 GTCTTAATGTTATAACAGAACTGATCATCGGGTACTTATACCCAGGAAAGCCACTAGCCA 1756
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1745 GTCTTAACGTTATAACAGAACTGATCATCGGGTACTTATACCCAGGAAAGCCACTAGCCA 1804
Query 1757 ATGTCGCTTTCAAGACATATGGATACATCAGTATGTCTCAAGCCTTGTACTTTGTAGGAG 1816
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1805 ATGTCGCTTTCAAGACATACGGATACATCAGTATGTCTCAAGCCTTGTACTTTGTAGGAG 1864
Query 1817 ACTTCAAGCTTGGTCACTACATGAAGATTCCTCCAAGATCAATGTTCATCGTCCAGCTTG 1876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1865 ACTTCAAGCTTGGTCACTACATGAAGATTCCTCCAAGATCAATGTTCATCGTCCAGCTTG 1924
Query 1877 TTGCAACTGTGGTTGCCTCAACTGTCTGCTTCGGAACAACTTGGTGGCTCATTACATCTG 1936
|||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct 1925 TTGCAACTGTGGTTGCATCAACTGTCTGCTTCGGAACAACCTGGTGGCTCATTACATCCG 1984
Query 1937 TAGAGAACATATGTAACGTGGATTTGCTCCCGGTGGGTAGTCCATGGACTTGTCCTGGAG 1996
| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 1985 TCGAGAACATATGTAATGTCGATTTGCTCCCGGTGGGTAGTCCATGGACTTGTCCTGGAG 2044
Query 1997 ATGAAGTGTTCTACAATGCATCAATCATATGGGGAGTGATTGGTCCAGGGAGAATGTTTA 2056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2045 ATGAAGTGTTCTACAATGCATCAATCATATGGGGAGTGATTGGTCCAGGGAGAATGTTTA 2104
Query 2057 CCAAAGAAGGTATCTATCCCGGGATGAACTGGTTCTTCCTTATCGGTCTCCTTGCTCCAG 2116
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2105 CCAAAGAAGGTATCTATCCCGGGATGAACTGGTTCTTCCTTATCGGTCTCCTCGCTCCAG 2164
Query 2117 TTCCTTTCTGGTACCTATCGAAGAAGTTCCCAGAGAAGAAATGGCTAAAACAGATCCATG 2176
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2165 TTCCCTTCTGGTACCTATCGAAGAAGTTCCCAGAGAAGAAATGGCTAAAACAGATCCATG 2224
Query 2177 TTCCCTTGATCTTCTCGGCGGTAAGCGCAATGCCACAAGCTAAGGCTGTGCATTACTGGT 2236
|||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||
Sbjct 2225 TTCCCTTGATCTTCTCTGCAGTAAGCGCCATGCCACAAGCTAAGGCTGTGCATTACTGGT 2284
Query 2237 CCTGGGCCATCGTTGGGGTTGTGTTCAACTACTACATCTTCAGGAGGTTTAAAACTTGGT 2296
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2285 CCTGGGCCATCGTTGGGGTTGTGTTCAACTACTACATCTTCAGGAGGTTCAAAACTTGGT 2344
Query 2297 GGGCGAGGCACAACTACATCCTCTCTGCAGCGCTTGATGCAGGTACTGCGATTATGGGAG 2356
||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2345 GGGCGAGGCACAATTACATCCTCTCTGCGGCGCTTGATGCAGGTACTGCGATTATGGGAG 2404
Query 2357 TGTTGATATTCTTCGCATTTCAGAACAATGATATAAGCTTACCTGATTGGTGGGGGCTTG 2416
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2405 TGTTGATATTCTTCGCATTCCAGAACAATGATATAAGCTTACCTGATTGGTGGGGGCTTG 2464
Query 2417 AGAATTCAGACCATTGCCCTCTAGCGCATTGCCCAACG-GCCAAAGGTGTAGTTGTTGAA 2475
|||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||
Sbjct 2465 AGAATTCAGACCATTGCCCTCTAGCGCATTGCCCT-CTAGCCAAAGGTGTTGTTGTTGAA 2523
Query 2476 GGTTGTCCCGTGTTTTAAGA-TTGATGAAGATGCAACCTTGTCCTGAAAGGGGTAACTGT 2534
|||||||||||||||||||| |||| | ||||||||| ||||||||||||||||||||||
Sbjct 2524 GGTTGTCCCGTGTTTTAAGAATTGAAGTAGATGCAACGTTGTCCTGAAAGGGGTAACTGT 2583
Query 2535 TGATG--T-CG-T--CGTTATATCTTTGTAATACCCCTCCCTAAGAAGTTAAGGGATTCA 2588
||||| | || | | |||||||| ||||| |||| ||| ||| |||||||| |||
Sbjct 2584 TGATGGCTTCGGTAACCTTATATCTGTGTAAAACCC-TCC--AAG---TTAAGGGACTCA 2637
Query 2589 AACAATGTAAAGCACTAGATTTGGTTTCATGTTCTTCAGTATTTAACTATTTACTTTGTA 2648
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2638 AACAATGTAAAGCACTAGATTTGGTTTCATGTTCTTCAGTATTTAACTATTCCCTTTGTA 2697
Query 2649 ACTTTAAGAACAATAGCCAAATAAAGTAGAGCTTTC---ATTCCAACTATATAATCAAAA 2705
| | |||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2698 AGTATAAGAACAGTAGCCAAATAAAGTAGAGCTTTCTTCATTCCAACTATATAATCAAAA 2757
Query 2706 TGCAACAAGCTCCAAGAGATATCATTCAAATGATAAAACTAAGGTTTAAGATGTGTACCA 2765
|| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2758 TGTAACAAGCTCCAAAAGATATCATTCAAATGATATAACTAAGGTTTAAGATGTGTACCA 2817
Query 2766 ATT 2768
|||
Sbjct 2818 ATT 2820
Score = 62.1 bits (33), Expect = 3e-08
Identities = 35/36 (97%), Gaps = 0/36 (0%)
Strand=Plus/Plus
Query 1 AAAATTCATGTGGTGTAAATTGTCTAAAGTCTATAT 36
|||||||||||||||||||||||||||||||| |||
Sbjct 2 AAAATTCATGTGGTGTAAATTGTCTAAAGTCTGTAT 37
> AT4G26590.1 | Symbols: ATOPT5, OPT5 | oligopeptide transporter
5 | chr4:13413973-13417055 REVERSE LENGTH=2628
Length=2628
Score = 1605 bits (869), Expect = 0.0
Identities = 1790/2227 (80%), Gaps = 94/2227 (4%)
Strand=Plus/Plus
Query 271 GAGTCCAAGATCGTAATCAATGCAGGA-GAAGAAGAAAAGGAGGAGGAGAATGATAATCC 329
|||||||||||||| || | || || ||||||| || ||||| || || || | |||
Sbjct 251 GAGTCCAAGATCGTCAT--A-GC-CGATGAAGAAG--AA-GAGGATGAAAACGACAGTCC 303
Query 330 GATTGAAGAAGTCCGGTTAACGGTACCGATAACCGACGATCCAACACTGCCGGTTCTAAC 389
|| ||||| ||||| ||||| ||||||||||||||||||||| | || || ||| | ||
Sbjct 304 AATCGAAGAGGTCCGTTTAACCGTACCGATAACCGACGATCCATCTCTACCAGTTTTGAC 363
Query 390 ATTTCGAACATGGTTTCTT-GGACTTCTCTCTTGCATCTTGCTTGCTTTCGTGAACCAGT 448
||| || |||||| ||||| ||| | | |||||| | | || || ||||||||| | |
Sbjct 364 ATTCCGTACATGG-TTCTTAGGAATGGTTTCTTGCGTGGTACTCGCGTTCGTGAACAATT 422
Query 449 TCTTCAGTTTCCGGTCGAACCAGCTTTGGGTATCTTCAGTTGCT-GCGCAGATCGTGACC 507
||||| ||| ||||||||||| ||| |||||||||||| | | || |||||| | ||
Sbjct 423 TCTTCGGTTACCGGTCGAACCCGCTCACGGTATCTTCAGTCG-TGGCTCAGATCATCACT 481
Query 508 CTCCCGCTGGGGAAA-CTCATGGCGAAGACGCTACCGACCAA-GAAATTCGGGTTT-CCT 564
||||| || ||||| |||||||| | ||| ||||| | ||| ||| || |||| |||
Sbjct 482 CTCCCTCT-AGGAAAGCTCATGGCCACGACTCTACC-AACAACAAAACTC-CGTTTACCT 538
Query 565 GGGACGAATTGGTCGTGGTCATTGAACCCTGGTCCGTTCAATATGAAAGAACATGTTCTT 624
|| || ||||||||||| || ||||||||||| || ||||| ||||| |||||||| ||
Sbjct 539 GGTACAAATTGGTCGTGTTCGTTGAACCCTGGACCATTCAACATGAAGGAACATGTACTG 598
Query 625 ATTACAATATTTGCTAATACCGGAGCTGGAGGAGTTTACGCCACAAGTATTATTACCATT 684
|| || ||||| |||||||||||||||||||||| ||| ||||| || || | |||||
Sbjct 599 ATCACTATATTCGCTAATACCGGAGCTGGAGGAGCTTATGCCACCAGCATCCTAACCATC 658
Query 685 GTTAAAGCTTTTTA-CAACCGTCAA-CTCAATGTCGCCGCCGCGATGTTGC-TCACACAA 741
|||||||| ||||| | |||| || |||||| ||||||||| ||||||| | | |||
Sbjct 659 GTTAAAGCATTTTATC-ACCG-GAATCTCAATCCCGCCGCCGCCATGTTGCTTGTC-CAA 715
Query 742 ACCACTCAGTTGTTGGGATATGGATGGGCTGGAATTTTCAGGAAGTTCCTTGTGGATTCA 801
||||||||||||||||||||||||||||| || || |||||||| | ||| ||||| |||
Sbjct 716 ACCACTCAGTTGTTGGGATATGGATGGGCGGGTATGTTCAGGAAATACCTAGTGGACTCA 775
Query 802 CCGTATATGTGGTGGCC-GTCAAATCTGGTTCAAGTCTCACTGTTTAGAGCTTTACATGA 860
|| || ||||||||||| | ||||||| ||||||||||| || |||||||| ||||||||
Sbjct 776 CCTTACATGTGGTGGCCTG-CAAATCTTGTTCAAGTCTCTCTCTTTAGAGCCTTACATGA 834
Query 861 GAAGGAGGATCTA-CAAAAAGGGCAACAAAC-AAGGTTTAGATTCTTCATCATTGTCTTC 918
||||||||| | | |||| ||||||| || || ||||||||| | || ||||||
Sbjct 835 GAAGGAGGAGA-AGCGTGAAGGAAAACAAACGAAACTT-AGATTCTTCTTGATAGTCTTC 892
Query 919 GGCGTGAGCTTTGCTTACTACATAATCCCCGGCTACCTTTTCCCTTCCATCTCCGCGAT- 977
| ||||||| ||||||||||| |||| ||||| ||||||||||||||||| ||
Sbjct 893 TTCCTGAGCTTCACTTACTACATAGTCCCAGGCTATCTTTTCCCTTCCATCTCAT--ATC 950
Query 978 T-TCATTTGTTTGCTGGATTTGGAAAAGCTCAGTGACCGCTCAGATTG-TCGGTTCGGGG 1035
| || ||||| |||||||| |||| |||| || |||||||| | | ||||||| |||
Sbjct 951 TCTCCTTTGTCTGCTGGATATGGACCCGCTCTGTAACCGCTCA-ACAGATCGGTTCAGGG 1009
Query 1036 CT-CAAGGGTTTAGGAATTGGTTCGTTTGGTCTTGACTGGTCCACAGTTGCTGGTTTCTT 1094
|| || || | | || ||||| || ||||||||||| |||||||| ||||| ||||||||
Sbjct 1010 CTGCACGG-TCTCGGCATTGGCTCATTTGGTCTTGATTGGTCCACGGTTGCAGGTTTCTT 1068
Query 1095 AGGCAGTCCATTGGCTGTACCATTCTTCGCCATTGCCAACTTC-TTTGGCGGATTCT-TC 1152
||||||||| || |||||||| |||||||| || ||||| ||| ||||||||||| | ||
Sbjct 1069 AGGCAGTCCTTTAGCTGTACCGTTCTTCGCTATAGCCAA-TTCCTTTGGCGGATT-TATC 1126
Query 1153 ATCTTTTTATACATTGTTCTGCCTATCTTCTACTGGA-CTAATGCTTATGATGCACAGAA 1211
||||| || ||||| | || |||||||||||||||| | || ||||| || ||| ||||
Sbjct 1127 ATCTTCTTCTACATCATCCTTCCTATCTTCTACTGGAGC-AACGCTTACGAGGCAAAGAA 1185
Query 1212 GTTTCCGTTCTATACTTCACACACC-TTTGATCAGACTGGACACACCT-ATAACATTACC 1269
|||||| |||||||| || ||| || |||||||| ||||| || | | | |||| ||
Sbjct 1186 GTTTCCTTTCTATACCTCTCAC-CCATTTGATCACACTGGTCAG-CGTTACAACACCACT 1243
Query 1270 CGTATCCTCAATGAGAAGAATTTTGA-TATCAATCTAGAC-GCTTAC-AACGGTTACAGC 1326
||||||||||| |||| || || | ||| |||| | |||||| || | | | |||
Sbjct 1244 CGTATCCTCAACCAGAA-AACATTCAATATTGATCTTC-CTGCTTACGAAAGCT-ATAGC 1300
Query 1327 AAGCTCTAT-TTGAGTGTGATGTTCGCGT-TGCTCTATGGACTCAGCTTCGGTTCTCTTT 1384
||||| || || || | |||| || | || ||||||| |||||||||||| | |||
Sbjct 1301 AAGCTTTACCTT-AGCATTCTGTTTGC-TCTGATCTATGGGCTCAGCTTCGGTACCCTTA 1358
Query 1385 TCGCTACCATCTCTCATGTCGCCCTCTATGATGGAAAGTTTATATGGG-GAATGTGGAAG 1443
||| ||||| |||||||||||||||| ||| ||||||||||| |||| | ||||||||
Sbjct 1359 CCGCAACCATTTCTCATGTCGCCCTCTTTGACGGAAAGTTTATCTGGGAGC-TGTGGAAG 1417
Query 1444 AAGGCAAAAAC-AGCAACAAAGGACAAGTACGGAGATGTGCATTCGAGATTAATGAAGAA 1502
||||||| | | | ||||||||||||| |||||||||||| | ||||| ||||||||
Sbjct 1418 AAGGCAACATTGA-CGACAAAGGACAAGTTTGGAGATGTGCATACAAGATTGATGAAGAA 1476
Query 1503 GAATTATCAGTCAGTACCTCAATGGTGGTTCATCGTAGTTCTAGTTATTTCCTTTGCTT- 1561
||||||| || ||||||||||||||||||| | | ||||| | | |||||||| |
Sbjct 1477 GAATTATAAGGAAGTACCTCAATGGTGGTTCGTTGCGGTTCTCGCTGCTTCCTTTG-TGC 1535
Query 1562 TCGCACTCTATGCTTGTGAAGGCTTTGACAAACAGCTTCAGCTTCCATGGTGGGGACTTA 1621
| || || ||||| ||||| || |||| ||||||||||||||| |||||||||||||||
Sbjct 1536 TAGCTCTTTATGCATGTGAGGGATTTGGCAAACAGCTTCAGCTCCCATGGTGGGGACTTT 1595
Query 1622 TACTCGCGTGCGCCATCGCCTTGTTC-TTCACATTGCCTATCGGAGTTATCCAAGCAACT 1680
||||||| || ||||||||||| | | ||||| |||||||| |||||||||| ||| ||
Sbjct 1596 TACTCGCTTGTGCCATCGCCTT-TACCTTCACTTTGCCTATTGGAGTTATCCTAGCGACC 1654
Query 1681 ACGAACCAGCAAATGGGTCTTAATGTTATAACAGAACTGATCATCGGGTACTTATACCCA 1740
|| ||||||| ||||||||||||||||||| | |||||||||||||||| ||| || ||
Sbjct 1655 ACAAACCAGCGAATGGGTCTTAATGTTATATCGGAACTGATCATCGGGTTCTTGTATCCG 1714
Query 1741 GGAAAGCCACTAGCCAATGTCGCTTTCAAGACATATGGATACA-TCAGTAT-GTCTCAAG 1798
||||||||||| |||||||| ||||| ||||| ||||| | | | ||||| | ||||||
Sbjct 1715 GGAAAGCCACTTGCCAATGTGGCTTTTAAGACTTATGGTT-CTGTGAGTATAG-CTCAAG 1772
Query 1799 CCTTGTACTTTGTAGGAGACTTCAAGCTTGGTCACTACATGAAGATTCCTCCAAGATCAA 1858
||||||||||||| ||||||||||| ||||| |||||||||||||||||||| ||||| |
Sbjct 1773 CCTTGTACTTTGTCGGAGACTTCAAACTTGGCCACTACATGAAGATTCCTCCGAGATCTA 1832
Query 1859 TGTTCATCGTCCAGCTTGTTGCAACTGTGGTTGCCTCAACTGTCTGCTTCGGAACAACTT 1918
|||||||||| || || ||||| ||| | ||||| |||||||||| |||||| || || |
Sbjct 1833 TGTTCATCGTTCAACTCGTTGCGACTATTGTTGCTTCAACTGTCTCCTTCGGGACCACAT 1892
Query 1919 GGTGGCT-CATTACATCTGTAGAGAACATATGTAACGTGGATTTGCTCCCGGTGGGTAGT 1977
||||| | | || | || || |||||||| |||||| ||| ||||||| | |||||
Sbjct 1893 GGTGGTTGCTTT-CTTCAGTCGAGAACATCTGTAACACAGATATGCTCCCAAAGAGTAGT 1951
Query 1978 CCATGGACTTGTCCTGGAGATGAAGTGTTCTACAATGCATCAATCATATGGGGAGTGATT 2037
|| |||||||| ||||| |||| |||||||||||| || || ||||| |||||| | ||
Sbjct 1952 CCGTGGACTTGCCCTGGGGATGTAGTGTTCTACAACGCGTCGATCATTTGGGGAATCATC 2011
Query 2038 GGTCCAGGGAGAATGTTTACCAAAG-AA-GGTATCTATCCCGGGATGAACTGGTTCTTCC 2095
||||| || || ||||| || || | || ||||| || ||||||||||||||||||||||
Sbjct 2012 GGTCCTGGAAGGATGTTCAC-AA-GTAAAGGTATATACCCCGGGATGAACTGGTTCTTCC 2069
Query 2096 TTATCGGTCT-CCTTGCTCCAGTTCCTTTCTGGTACCTAT-CGAAG-AAGTTCCCAGAGA 2152
| || || || ||||||||| || || |||||| | | | | ||| || ||||| ||||
Sbjct 2070 TCATTGG-CTTCCTTGCTCCTGTCCCGGTCTGGTTCTT-TGC-AAGGAAATTCCCGGAGA 2126
Query 2153 AGAAATGGCTAAAACAGATCCATGTTCCCTTGATCTTCTC-GGCGG-TAA-GCGCAATGC 2209
|||| ||| || | ||||| ||| |||||||||||||||| || || ||| | | | |||
Sbjct 2127 AGAAGTGGATACATCAGATTCATATTCCCTTGATCTTCTCAGG-GGCTAATGTG-A-TGC 2183
Query 2210 CACAAG-CTAAGGCTGTGCATTACTGGTCCTGGG-C-CATCGTTGGGGTTGTGTTCAACT 2266
|| | | | |||||||||||||||||||| ||| | | | |||||| | ||||||||||
Sbjct 2184 CA-ATGGCCAAGGCTGTGCATTACTGGTCGTGGTTCGC-T-GTTGGGATCGTGTTCAACT 2240
Query 2267 ACTACATCTTCAGGAGGTTTAAAACTTGGTGGGCGAGGCACAACTACATCCTCTCTGCAG 2326
|||| ||||||||||||| || |||||||| ||||| |||||||||||||||||||
Sbjct 2241 ACTATATCTTCAGGAGGTACAAGGGATGGTGGGCAAGGCATAACTACATCCTCTCTGCAG 2300
Query 2327 CGCTTGATGCAGGTACTGCGATTATGGGAGTGTTGATATTCTTCGCATTTCAGAACAATG 2386
| ||||||||||| |||||| |||||||||||||||| | ||| || || |||||||||
Sbjct 2301 CTCTTGATGCAGGCACTGCGGTTATGGGAGTGTTGATCTACTTTGCGTTACAGAACAATA 2360
Query 2387 ATATAAGCTTACCTGATTGGTGGGGGCTTGAGAATTCAGACCATTGCCCTCTAGCGCATT 2446
| ||||||||||| |||||||||||| |||||| |||||||||||||| | || |||
Sbjct 2361 ACATAAGCTTACCAGATTGGTGGGGGAATGAGAACACAGACCATTGCCCTTTGGCAAATT 2420
Query 2447 GCCCAAC 2453
|||||||
Sbjct 2421 GCCCAAC 2427
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 137507590763
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5