BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg495693 Length=725 Score E Sequences producing significant alignments: (Bits) Value AT5G56075.1 | Symbols: | Domain of unknown function (DUF2431) ... 870 0.0 AT5G56060.1 | Symbols: | Domain of unknown function (DUF2431) ... 145 7e-34 > AT5G56075.1 | Symbols: | Domain of unknown function (DUF2431) | chr5:22709756-22710809 FORWARD LENGTH=771 Length=771 Score = 870 bits (471), Expect = 0.0 Identities = 556/595 (93%), Gaps = 14/595 (2%) Strand=Plus/Plus Query 132 ACTAAAAGGTTAAGACATTACACTAACAAACAAAAAATACTTTTGGTCGGAGAAGGAGAC 191 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 190 ACTAAAAGGTTAAGACATTACACTAACAAACAAAAAATTCTTTTGGTCGGAGAAGGAGAC 249 Query 192 TTCTCCTTTTCTCTATCTTTAGCTAGAGCCTTTGGTTCTGCAACAAACCTCACCGCGACC 251 |||||||||||||| ||| ||||||||||||||||||||||| | ||||||||||| ||| Sbjct 250 TTCTCCTTTTCTCTGTCTCTAGCTAGAGCCTTTGGTTCTGCATCTAACCTCACCGCAACC 309 Query 252 TCTCTCGATACTCAAGGGGAGCTAGAGC-GTAAGTTTAAGAATGGGAAGTCGAACGTAGA 310 |||||||||||||||||||||||||||| | |||||||||||||||||| |||| ||||| Sbjct 310 TCTCTCGATACTCAAGGGGAGCTAGAGCAG-AAGTTTAAGAATGGGAAGGCGAATGTAGA 368 Query 311 AGAGCTGGAAAGACTCGGGTGCAGCGTGGTATATGGAGTTAACGTCCACTCCATGACCAC 370 |||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||| Sbjct 369 AGAGCTGGAAAGACTCGGGTGCAGCGTGGTCTATGGAGTTAACGTGCACTCCATGATCAC 428 Query 371 AAAGCCTAGCGTTGGTGGTTCCGCGATATATGACAGAGTCATCTTCAATTTCCCTCACGC 430 ||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||| | | Sbjct 429 AAAACCTAGCGTTGGTGGTTCTGCGATATATGACAGAGTCATCTTCAATTTTCCT-A--C 485 Query 431 AGGGAGGCATCAAGAGCTTGTAAGAGGGTTTATGAAGAGTGCAAGAGTGATGGTGAAAGA 490 |||| ||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct 486 ------GCAT---GAGCTTGTACGAGGGTTTATGAAGAGTGCAAGAGTGTTGGTGAAAGA 536 Query 491 TGAAGACAAGGGAGGAGAGATTCATGTGATTCATAAGACAGAATATCCATTTAGCGAGTG 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 537 TGAAGACAAGGGAGGAGAGATTCATGTGATTCATAAGACAGAATATCCATTTAGCGAGTG 596 Query 551 GAAGCTAAAGACTTTGGGTGAGAAAGAAGGTTTAGATTTGATCCGTGAGATCGAGTTTTG 610 |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 597 GAAGCTCAAGACTTTGGGTGAGAAAGAAGGTTTAGATTTGATCCGTGAGGTCGAGTTTTG 656 Query 611 CTTAAGTCAATATCCTGGTTATTCCAACAAGAGAGGAAGTGGAGGTTATAGTGATTCTAG 670 ||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||| Sbjct 657 CTTAAGTCATTATCCTGGTTATTTCAACAAGAGAGGAAGTGGAGGTTATAGTGACTCTAG 716 Query 671 CTTCCCTGTCGGAAAATCTTCTACTTTCATGTTTACAAAACAGTTCTTTTACTAA 725 ||||||||| || ||||||||||||||||||||||| |||||||||||||| ||| Sbjct 717 CTTCCCTGTTGGGAAATCTTCTACTTTCATGTTTACGAAACAGTTCTTTTATTAA 771 Score = 89.8 bits (48), Expect = 3e-17 Identities = 71/81 (88%), Gaps = 6/81 (7%) Strand=Plus/Plus Query 1 TTTCGAATTACATAAATACCCACAAAGTTCGAAGAGCCAAATGAATATAGCTAGTAAACA 60 ||||||||||||||||| |||||||||||||||||| |||| || || ||||||| Sbjct 26 TTTCGAATTACATAAATGCCCACAAAGTTCGAAGAGTCAAAC---TA---CTTGTAAACA 79 Query 61 AACAAAACCAAACATTTAATA 81 ||||||||||||||||||||| Sbjct 80 AACAAAACCAAACATTTAATA 100 > AT5G56060.1 | Symbols: | Domain of unknown function (DUF2431) | chr5:22704008-22704892 FORWARD LENGTH=663 Length=663 Score = 145 bits (78), Expect = 7e-34 Identities = 170/214 (79%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 156 AACAAACAAAAAATACTTTTGGTCGGAGAAGGAGACTTCTCCTTTTCTCTATCTTTAGCT 215 ||||| |||||||||||||||||||||||||||||||| || |||||| | ||| |||| Sbjct 40 AACAAGCAAAAAATACTTTTGGTCGGAGAAGGAGACTTTTCGTTTTCTTTGTCTCTAGCC 99 Query 216 AGAGCCTTTGGTTCTGCAACAAACCTCACCGCGACCTCTCTCGATACTCAAGGGGAGCTA 275 |||| ||||||||||| |||||| |||| ||||||||||| || |||| || ||||||| Sbjct 100 AGAGTTTTTGGTTCTGCCACAAACATCACTGCGACCTCTCTTGACACTCGAGAGGAGCTA 159 Query 276 GAGCGTAAGTTTAA-GAATGGGAA-GTCGAACGTAGAAGAGCTGGAAA-GACTCGGGTGC 332 | | ||||| | || ||| || | | || || |||| | |||| | | |||||| Sbjct 160 GGGATTAAGTACACTGA-TGGAAAAG-CAAATGTGGAAGGGTTGGAGTTGTTT-GGGTGC 216 Query 333 AGC-GTGGTATATGGAGTTAACGTCCACTCCATG 365 | | ||||| | || |||||||||||||||||| Sbjct 217 A-CAGTGGTCCACGGTGTTAACGTCCACTCCATG 249 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 35163902900 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5