BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg495726
Length=1942
Score E
Sequences producing significant alignments: (Bits) Value
AT5G56350.1 | Symbols: | Pyruvate kinase family protein | chr5... 2782 0.0
AT4G26390.1 | Symbols: | Pyruvate kinase family protein | chr4... 1325 0.0
> AT5G56350.1 | Symbols: | Pyruvate kinase family protein | chr5:22820006-22822766
REVERSE LENGTH=1982
Length=1982
Score = 2782 bits (1506), Expect = 0.0
Identities = 1658/1733 (96%), Gaps = 4/1733 (0%)
Strand=Plus/Plus
Query 213 TAGCGATGGCGATGATAGAGCAAAGGCCGAAGACGAAGATCGTTTGTACTCTAGGTCCAG 272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 233 TAGCGATGGCGATGATAGAGCAAAGGCCGAAGACGAAGATCGTTTGTACTCTAGGTCCAG 292
Query 273 CTTCCAGATCTGTTCCGATGGTTGAGAAGCTTCTTAGGGCTGGTATGAACGTTGCTCGCT 332
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct 293 CTTCCAGATCTGTTCCGATGGTCGAGAAGCTTCTTAGGGCTGGTATGAACGTTGCTCG-T 351
Query 333 TT-AATTTCTCTCATGGATCTCATGAATACCATCAAGAGACTCTTGATAATCTCCATCAA 391
|| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct 352 TTCAATTTCTCTCATGGATCTCATGAATACCATCAAGAGACTCTCGATAATCTTCATCAA 411
Query 392 GCTATGCTTAATACTGGGATTCTCTGTGCTGTCATGCTCGATACCAAGGGTCCAGAAATC 451
||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 412 GCTATGCTTAACACTGGGATTCTCTGTGCCGTCATGCTCGACACCAAGGGTCCAGAAATC 471
Query 452 CGAACCGGGTTCTTGAAAGATGGGAAACCAATCCAGCTGAAACAAGGCCAAGAGATCACC 511
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 472 CGAACCGGGTTCTTGAAAGATGGGAAACCAATCCAGCTGAAACAAGGACAAGAGATCACT 531
Query 512 ATTTCGACTGACTATGACTTGAAGGGTGACGAGAACACGATTTGCATGAGCTACAAAAAG 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 532 ATTTCGACTGACTATGACTTGAAGGGTGACGAGAACACGATTTGCATGAGCTACAAAAAG 591
Query 572 TTGGCTGTAGATGTGAACCCAGGAATGGTCATACTTTGCGCTGATGGTACCATCTCGTTA 631
|||||||| ||||||||||||||||||||||| ||||| ||||||||||| ||||| |||
Sbjct 592 TTGGCTGTTGATGTGAACCCAGGAATGGTCATTCTTTGTGCTGATGGTACAATCTCCTTA 651
Query 632 CTGGTTCTCTCTTGTGACAAAGAGAACGGTACTGTCCGTTGCCGGTGTGAGAACAGTGCA 691
|||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct 652 CTGGTTCTCTCTTGTGACAAAGAGAACGGTACAGTCCGTTGCCGGTGTGAGAACTCTGCG 711
Query 692 ATGCTCGGAGAGAGGAAGAACGTCAATCTTCCAGGTGTCGTTGTGGATCTCCCAACTCTA 751
|||||||| ||||| |||||||| ||||| |||||||| |||||||||||||||||||||
Sbjct 712 ATGCTCGGTGAGAGAAAGAACGTTAATCTCCCAGGTGTTGTTGTGGATCTCCCAACTCTA 771
Query 752 ACTGAGAAAGACAAAGAAGACATCATGCAATGGGGAGTCCCGAATCAAATCGACATGATT 811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 772 ACTGAGAAAGACAAAGAAGACATCATGCAATGGGGAGTCCCGAATCAAATCGACATGATT 831
Query 812 GCTCTGTCTTTTGTCAGAAAAGGTTCAGACTTGGTCCAGGTCCGGAAACTTCTAGGAAAG 871
||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||
Sbjct 832 GCTCTGTCTTTTGTCAGGAAAGGTTCAGACTTGGTTCAAGTCCGGAAACTTCTAGGAAAG 891
Query 872 CACGCCAAAAACATTCTTCTCATGTCTAAGGTCGAGAACCAAGAAGGTGTGGCAAATTTT 931
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 892 CACGCCAAAAACATTCTTCTCATGTCTAAGGTCGAGAACCAAGAAGGTGTGGCAAATTTT 951
Query 932 GATGACATTTTGGTCAATTCGGACGCTTTCATGATTGCCAGAGGAGATCTGGGCATGGAA 991
|||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 952 GATGACATTTTGGTCAATTCAGACGCTTTCATGATTGCTAGAGGAGATCTGGGCATGGAA 1011
Query 992 ATCCCAATTGAGAAGATCTTCTTAGCTCAGAAGGTGATGATCTACAAATGCAACATCCAG 1051
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1012 ATCCCGATTGAGAAGATCTTCTTAGCTCAGAAGGTGATGATCTACAAATGCAACATCCAG 1071
Query 1052 GGAAAACCTGTGGTCACAGCGACTCAGATGCTCGAGTCCATGATCAAGTCTCCTCGACCC 1111
|||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||
Sbjct 1072 GGAAAACCTGTGGTCACAGCAACTCAGATGCTCGAGTCCATGATCAAATCTCCTAGACCC 1131
Query 1112 ACAAGAGCTGAAGCCACAGATGTTGCAAACGCGGTCCTCGACGGTACAGACTGTGTCATG 1171
|||||||| ||||| || ||||| |||||||| ||||| || ||||||||||||||||||
Sbjct 1132 ACAAGAGCCGAAGCTACGGATGTAGCAAACGCAGTCCTTGATGGTACAGACTGTGTCATG 1191
Query 1172 CTCAGTGGTGAAACCGCAGCTGGAGCATACCCTGAACTAGCTGTCCGTACAATGGCTAAG 1231
|||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1192 CTCAGTGGTGAAACTGCAGCTGGAGCATACCCTGAACTAGCCGTCCGTACAATGGCTAAG 1251
Query 1232 ATCTGTGTGGAAGCCGAGAGCACCCTTGACTACGGAGACGTCTTCAAGAGGATCATGCTG 1291
||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct 1252 ATCTGCGTGGAAGCCGAGAGCACCCTTGACTACGGTGATGTCTTCAAGAGGATCATGCTG 1311
Query 1292 TACTCTCCAGTTCCAATGAGCCCACTTGAGTCACTCGCATCCTCAGCAGTCAGAACCGCT 1351
|||||||||||||||||||| ||||| |||||||| ||||| ||||| |||||||| |||
Sbjct 1312 TACTCTCCAGTTCCAATGAGTCCACTCGAGTCACTTGCATCTTCAGCTGTCAGAACTGCT 1371
Query 1352 AACTCAGCTAGAGCCACCCTCATCATGGTCCTAACCAGAGGAGGGAGCACAGCAAGACTT 1411
||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct 1372 AACTCAGCTAGAGCCACTCTCATCATGGTCCTAACCAGAGGAGGAAGCACAGCAAGACTT 1431
Query 1412 GTTGCTAAGTACAGACCAGGAATGCCTATTCTATCCGTCGTTGTTCCCGAGATCAAAACC 1471
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1432 GTGGCTAAGTACAGACCAGGAATGCCTATTCTATCCGTCGTTGTTCCTGAGATCAAAACC 1491
Query 1472 GACTTCTTCGACTGGTCTTGCAGCGATGAGTCCCCAGCTAGACACAGCCTCATCTTCCGT 1531
|||||||| |||||||||||||||||||| ||||| || ||||||||||| |||||||||
Sbjct 1492 GACTTCTTTGACTGGTCTTGCAGCGATGAATCCCCCGCGAGACACAGCCTTATCTTCCGT 1551
Query 1532 GGTCTGATCCCAGTGCTCTACGCTGGATCCGCTAGAGCCTCGCACGATGAATCAACAGAA 1591
|||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct 1552 GGTCTGATCCCAGTGCTCTACGCTGGATCCGCAAGAGCCTCACACGATGAATCAACAGAA 1611
Query 1592 GAAGCTATTGAGTTTGCTACTCAGTACGGGAAAGAGAAAGAGCTGTGCAAGACTGGAGAC 1651
|||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1612 GAAGCTATCGAGTTTGCTACTCAGTACGGGAAAGAGAAAGAGCTATGCAAGACTGGAGAT 1671
Query 1652 TCTGTTGTTGCTCTACTCCGAGTCGGTAATGCTTCAGTGATCAAGATCTTGACCGTCAAG 1711
|| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1672 TCCGTTGTTGCTCTACTCCGAGTCGGTAATGCTTCCGTGATCAAGATCTTGACCGTCAAG 1731
Query 1712 TGATGATTCCAATCAAAAA-TCCCGTTTTTAGCGTTTGGGGAACGCTACTTTAAACGTTT 1770
||||||||||| ||||||| || ||||||| |||||||||||||||||||||||||||||
Sbjct 1732 TGATGATTCCACTCAAAAATTCACGTTTTTGGCGTTTGGGGAACGCTACTTTAAACGTTT 1791
Query 1771 TATTATGAAACTATTCAAGATTGTGATTAAAATCTTGAGATAGAAAACTCAAGTTCTATT 1830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1792 TATTATGAAACTATTCAAGATTGTGATTAAAATCTTGAGATAGAAAACTCAAGTTCTATT 1851
Query 1831 TTTTGCTTATTACCACAACTATTGTGACCGGTGAATCCACTTAACAGCTCCTTTTGGGAT 1890
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1852 TTTTGCTTATTACCACAACTACTGTGACCGGTGAATCCACTTAACAGCTCCTTTTGGGAT 1911
Query 1891 ATTTTGGTTGTATGGAAAC-TATTGGATCATACATACACGTATCAATTATCAT 1942
||||||||||||| ||||| ||||||||||| |||||||||||||||||||||
Sbjct 1912 ATTTTGGTTGTATTGAAACCTATTGGATCATTCATACACGTATCAATTATCAT 1964
> AT4G26390.1 | Symbols: | Pyruvate kinase family protein | chr4:13342207-13344418
FORWARD LENGTH=1494
Length=1494
Score = 1325 bits (717), Expect = 0.0
Identities = 1244/1498 (83%), Gaps = 38/1498 (3%)
Strand=Plus/Plus
Query 236 AGGCCGAAGACGAAGATCGTTTGTACTCTAGGTCCAGCTTCCAGATCTGTTCCGATGGTT 295
||||| |||||||||||||| || || || || || || ||||||||||| || |||||
Sbjct 16 AGGCCTAAGACGAAGATCGTGTGCACACTCGGGCCGGCGTCCAGATCTGTCCCAATGGTC 75
Query 296 GAGAAGCTTCTTAGGGCTGGTATGAACGTTGCTCGCTTTAA-TTTCTCTCATGGATCTCA 354
||||||||||||| ||| || |||| ||| |||||||| || ||| |||||||||||| |
Sbjct 76 GAGAAGCTTCTTATGGCGGGGATGAGCGTGGCTCGCTTCAACTTT-TCTCATGGATCTTA 134
Query 355 TGAATACCATCAAGAGACTCTTGATAATCTCCATCAAGCTATGCTTAATACTGGGATTCT 414
||||| || || |||||||| || ||||| | ||| || |||||||| ||||| || ||
Sbjct 135 CGAATATCACCAGGAGACTCTCGACAATCTTCGTCAGGCCATGCTTAACACTGGCATGCT 194
Query 415 CTGTGCTGTCATGCTCGATACCAAGGGTCCAGAAATCCGAACCGGGTTCTTGAAA-GATG 473
||||||||||||||||| |||||||| ||||| || |||||||||||||| ||| ||||
Sbjct 195 ATGTGCTGTCATGCTCGACACCAAGGGACCAGAGATTCGAACCGGGTTCTT-AAAGGATG 253
Query 474 GGAAACCAATCCAGCTGAAACAAGGCCAAGAGATCACCATTTCGACTGACTATGACTTGA 533
||||||| |||||||| |||||||||||||| ||||||||||| ||||||||||||||||
Sbjct 254 GGAAACCTATCCAGCTCAAACAAGGCCAAGAAATCACCATTTCAACTGACTATGACTTGA 313
Query 534 AGGGTGACGAGAACACGATTTGCATGAGCTACAAAAAGTTGGCTG-TAGATGTGAACCCA 592
||||||| ||||| || ||||||||||||||||| |||||||| | ||||||||| |||
Sbjct 314 AGGGTGATGAGAAAACTATTTGCATGAGCTACAAGAAGTTGGC-GCAAGATGTGAATCCA 372
Query 593 GGAATGGTCATACTTTGCGCTGATGGTACCATCTCGTTACTGGTTCTCTCTTGTGACAAA 652
|| ||||||||||| || || |||||||||||||||||| ||| || ||||||||||||
Sbjct 373 GGCATGGTCATACTCTGTGCCGATGGTACCATCTCGTTAAAGGTCCTTTCTTGTGACAAA 432
Query 653 GAGAACGGTACTGTCCGTTGCCGGTGTGAGAACAGTGCAATGCTCGGAGAGAGGAAGAAC 712
|| || || ||||||||||| || |||||||||| | ||||||| || || || ||||||
Sbjct 433 GAAAAGGGCACTGTCCGTTGTCGTTGTGAGAACACTTCAATGCTTGGTGAAAGAAAGAAC 492
Query 713 GTCAATCTTCCAGGTGTCGTTGTGGATCTCCCAACTCTAACTGAGAAAGACAAAG-AAGA 771
|| ||||| || ||||| || || |||||||||||||||||||| |||||| ||| ||||
Sbjct 493 GTTAATCTCCCTGGTGTTGTGGTTGATCTCCCAACTCTAACTGAAAAAGAC-AAGCAAGA 551
Query 772 CA-TCATGCAATGGGGAG-TCCCGAATCAAATCGACATGATTGCTCTGTCTTTTGTCAGA 829
|| || || ||||||||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct 552 CATTCTTG-AATGGGGAGTTCCC-AATCAAATCGACATGATTGCTCTGTCTTTTGTCAGA 609
Query 830 AAAGGTTCAGACTTGGTCCAGGTCCGGAAACTTCTAGGAAAGCACGCCAAAAACATTCTT 889
|||||||| |||||||| || || |||| || || ||||| || || |||| ||| |||
Sbjct 610 AAAGGTTCGGACTTGGTACAAGTTAGGAAGCTACTTGGAAAACATGCTAAAACCATACTT 669
Query 890 CTCATGTCTAAGGTCGAGAACCAAGAAGGTGTGGCAAATTTTGATGACATTTTGGTCAAT 949
|||||||| ||||| || |||||||||||||| || ||||||||||| || ||| | ||
Sbjct 670 CTCATGTCAAAGGTTGAAAACCAAGAAGGTGTAGCGAATTTTGATGATATCTTGATAAAC 729
Query 950 TCGGACGC-TTTCATGATTGCCAGAGGAGATCTGGGCATGGAAATCCCAATTGAGAAGAT 1008
||||| || ||| ||||| || ||||| || || || ||||| || ||||||||||||||
Sbjct 730 TCGGATGCGTTT-ATGATCGCAAGAGGTGACCTTGGAATGGAGATTCCAATTGAGAAGAT 788
Query 1009 CTTCTTAGCTCAGAAGGTGATGATCTACAAATGCAACATCCA-GGGAAAACCTGTGGTCA 1067
|||||||||||||| |||||||||||||| ||||| || | ||| || || ||||| |
Sbjct 789 ATTCTTAGCTCAGAAAGTGATGATCTACAAGTGCAATTTC-ATGGGGAAGCCAGTGGTTA 847
Query 1068 CAGCGACTCAGATGCTCGAGTCCATGATCAAGTCTCCTCGACCCACAAGAGCTGAAGCCA 1127
|||||||||||||||| ||||| |||||||| || || ||||| |||||||| ||||| |
Sbjct 848 CAGCGACTCAGATGCTTGAGTCTATGATCAAATCCCCACGACCAACAAGAGCAGAAGCTA 907
Query 1128 CAGATGTTGCAAACGCGGTCCTCGACGGTACAGACTGTGTCATGCTCAGTGGTGAAACCG 1187
| ||||||||||| || |||||||| || ||||||||||||||||| |||||||||||||
Sbjct 908 CTGATGTTGCAAATGCTGTCCTCGATGGCACAGACTGTGTCATGCTTAGTGGTGAAACCG 967
Query 1188 CAGCTGGAGCATACCCTGAACTAGCTGTCCGTACAATGGCTAAGATCTGTGTGGAAGCCG 1247
|||||||||||||||| || || ||||| ||||||||||| ||||| ||||||||||| |
Sbjct 968 CAGCTGGAGCATACCCAGAGCTTGCTGTTCGTACAATGGCCAAGATATGTGTGGAAGCAG 1027
Query 1248 AGAGCACCCTTGACTACGGAGACGTCTTCAAGAGGATCATGCTGT-ACTCTCCAGTTCCA 1306
||||||| |||||||| |||||| ||||||||||||| ||||| | || || | || ||
Sbjct 1028 AGAGCACACTTGACTATGGAGACATCTTCAAGAGGATAATGCT-TCACGCTGCGGTCCCT 1086
Query 1307 ATGAGCCC-ACTTGAGTCACTCGCATCCTCAGCAGTCAGAACCGCTAACT-CAGCTAGAG 1364
|||||||| | | |||||||| || || || || ||||||||||||| || | | ||||
Sbjct 1087 ATGAGCCCGA-TGGAGTCACTTGCTTCATCTGCGGTCAGAACCGCTA-CTTCCTCAAGAG 1144
Query 1365 CCACCCTCATCATGGTCCTAACCAGAGGAGGGAGCACAGCAAGACTTGTTGCTAAGTACA 1424
|||| || || |||||| | ||||||||||| ||||| || || || || |||||||| |
Sbjct 1145 CCACTCTTATGATGGTCTTGACCAGAGGAGGCAGCACGGCGAGGCTGGTGGCTAAGTATA 1204
Query 1425 GACCAGGAATGCCTATTCTATCCGTCGTTGTTCCCGAGATCAAAACCGACT-TCTTCGAC 1483
||||||| || || ||| | ||||| || ||||| || |||| | |||| | || ||
Sbjct 1205 GACCAGGGATACCCATTTTGTCCGTGGTGGTTCCTGAAATCACGTCTGACTCTTTT-GAT 1263
Query 1484 TGGTCTTGCAGCGATGAGTCCCCAGCTAGACACAGCCTCATCTTCCGTGGTCT-GATCCC 1542
||| | || ||| | ||| | || || |||||||| ||||||| ||||||| | | ||||
Sbjct 1264 TGGGCGTGTAGCAACGAGGCACCGGCAAGACACAGTCTCATCTACCGTGGTTTAG-TCCC 1322
Query 1543 AGTGCTCTACGCTGGATCCGCTAGAGCCTCGCA-CGATGAATCAACAGAAGAAGCTATTG 1601
||||| || |||||||| |||||||||||| | ||| || |||||||||||| || | |
Sbjct 1323 GGTGCTGTATGCTGGATCGGCTAGAGCCTCG-ATCGACGAGTCAACAGAAGAAACTCTCG 1381
Query 1602 AGTTTGC-TACTCAGTACGGGAAAGAGAAAG-AGCTGTGCAAGACTGGAGACTCTGTTGT 1659
|||| || | | |||| || ||| |||| | | || |||||||| ||||||||||||||
Sbjct 1382 AGTTCGCGT-CAGAGTATGGTAAAAAGAA-GCAACTCTGCAAGACCGGAGACTCTGTTGT 1439
Query 1660 TGCTCTACT-CCG-AGTCGGTAATGCT-TCAGTGATCAAGATCTTGACCGTCAAGTGA 1714
||||| || ||| | ||||| ||| | || ||||||||||||||||||||||||
Sbjct 1440 GGCTCT-CTTCCGTACA-GGTAACGCTATT-GTTATCAAGATCTTGACCGTCAAGTGA 1494
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 96184244220
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5