BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg495747 Length=1221 Score E Sequences producing significant alignments: (Bits) Value AT5G56580.1 | Symbols: ATMKK6, ANQ1, MKK6 | MAP kinase kinase 6... 1989 0.0 > AT5G56580.1 | Symbols: ATMKK6, ANQ1, MKK6 | MAP kinase kinase 6 | chr5:22904689-22906661 REVERSE LENGTH=1274 Length=1274 Score = 1989 bits (1077), Expect = 0.0 Identities = 1162/1203 (97%), Gaps = 6/1203 (0%) Strand=Plus/Plus Query 20 AAAG-aaaaaaaTGGTGAAGATCAAATCGAACTTGAAGCAGCTTAAGCTCTCCGTTCCAG 78 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 31 AAAGAAAAAAAATGGTGAAGATCAAATCGAACTTGAAGCAGCTTAAGCTCTCCGTTCCAG 90 Query 79 CTCAAGAATCCCCAATCTCTTCCTTCTTGACTGCGAGTGGAACGTTTCACGATGGAGATT 138 |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| Sbjct 91 CTCAAGAATCCCCAATCTCTTCCTTCCTGACTGCGAGTGGAACATTTCACGATGGAGATT 150 Query 139 TTCTTCTGAATCAAAAGGGGTTAAGGTTGATGTCAGATGAGAAGCAATCAAGGCAATCTG 198 |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct 151 TTCTTCTGAATCAAAAGGGGCTAAGGTTGACGTCAGATGAGAAGCAATCAAGGCAATCTG 210 Query 199 ATAGCAAGGAGCTTGATTTCGAAATTACCGCTGAAGACTTAGAGACTGTGAAAGTCATCG 258 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct 211 ATAGCAAGGAGCTTGATTTCGAAATTACTGCTGAAGACTTAGAGACTGTCAAAGTCATCG 270 Query 259 GAAAAGGCAGTGGTGGTGTTGTTCAATTAGTTCGTCATAAATGGGTTGGCAAATTCTTTG 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 271 GAAAAGGCAGTGGTGGTGTTGTTCAATTAGTTCGTCATAAATGGGTTGGCAAATTCTTTG 330 Query 319 CTATGAAGGTCATACAGATGAATATACAAGAGGAGATCCGTAAGCAAATTGTCCAGGAGC 378 ||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||| Sbjct 331 CTATGAAGGTCATACAGATGAATATACAAGAAGAAATCCGTAAGCAAATTGTTCAGGAGC 390 Query 379 TCAAAATAAACCAAGCATCATCGCAATGTCCACATGTAGTTGTTTGCTACCATTCTTTCT 438 | |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct 391 TTAAAATAAACCAAGCATCATCACAATGTCCACATGTAGTAGTTTGCTACCATTCTTTCT 450 Query 439 ATCACAATGGAGCCTTTTCTCTTGTGCTTGAATACATGGACCGGGGATCTCTTGCGGATG 498 ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct 451 ATCACAATGGAGCCTTTTCGCTTGTGCTTGAATACATGGACCGTGGATCTCTTGCGGATG 510 Query 499 TGATAAGACAAGTCAAGACTATTCTTGAACCTTACCTTGCTGTTGTCTGTAAACAGGTTT 558 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 511 TGATTAGACAAGTCAAGACTATTCTTGAACCTTACCTTGCTGTTGTCTGTAAACAGGTTT 570 Query 559 TGCTAGGCCTTGTGTACCTGCACAACGAAAGACATGTCATACACAGAGACATTAAGCCTT 618 ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct 571 TGCTAGGTCTTGTGTACCTACACAACGAAAGACATGTCATACACAGAGACATTAAGCCAT 630 Query 619 CAAACCTTCTTGTAAACCATAAAGGGGAAGTGAAAATCTCAGATTTTGGTGTAAGTGCAA 678 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 631 CAAACCTTCTTGTAAACCATAAAGGGGAAGTGAAAATCTCAGATTTTGGTGTAAGTGCAA 690 Query 679 GTCTTGCTAGCTCCATGGGACAGAGGGACACATTTGTTGGAACCTACAACTATATGTCGC 738 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 691 GTCTTGCTAGCTCCATGGGACAGAGGGACACATTTGTTGGAACCTACAACTATATGTCGC 750 Query 739 CTGAGAGGATCAGTGGAAGCACATATGACTACAGCAGTGACATTTGGAGTTTGGGCATGT 798 |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 751 CTGAGAGGATTAGTGGAAGCACATATGACTACAGCAGTGACATTTGGAGTTTGGGGATGT 810 Query 799 CAGTGTTAGAATGCGCAATAGGAAGATTCCCTTACTTAGAATCTGAAGATCAGCAAAACC 858 ||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct 811 CAGTGTTAGAATGTGCAATAGGAAGATTTCCTTATTTAGAATCTGAAGATCAGCAAAACC 870 Query 859 CACCAAGCTTTTATGAACTCTTGGCAGCAATCGTAGAGAATCCACCACCAACTGCTCCTT 918 | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 871 CGCCAAGCTTTTATGAACTCTTGGCAGCAATAGTAGAGAATCCACCACCAACTGCTCCTT 930 Query 919 CTGATCAATTCTCACCTGAATTCTGCTCCTTTGTATCAGCCTGCATACAAAAAGATCCTC 978 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 931 CTGATCAATTCTCACCTGAATTCTGCTCCTTTGTATCAGCCTGCATACAAAAAGATCCTC 990 Query 979 CAGCAAGAGCATCATCTTTGGAACTCTTGAGTCATCCATTCATAAAAAAGTTTGAAGACA 1038 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct 991 CAGCAAGAGCATCATCTTTGGACCTCTTGAGTCATCCATTCATAAAAAAGTTTGAGGACA 1050 Query 1039 AGGATATTGATCTCGGGATACTTGTTGGCACTCTGGAACCACCTGTTAACTACCTTAGAT 1098 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1051 AGGATATCGATCTCGGGATACTTGTTGGCACTCTGGAACCACCTGTTAACTACCTTAGAT 1110 Query 1099 AAGTAAACCCTCTTCTTCCGCATTTGCATTTGGTATATGATATGATATGATAAGATACAT 1158 |||||| ||||||||||| |||||||||||||||||||||||||||| | ||||||| Sbjct 1111 AAGTAAGCCCTCTTCTTCTGCATTTGCATTTGGTATATGATATGATA--A---GATACAT 1165 Query 1159 GATATTGTGTAATGTATCTCTACAGATTATTACTTGACAATGAAAGTTGAATGAGATTTT 1218 ||||||||||||||| |||||| ||| ||||||||||| || |||||||||||||||||| Sbjct 1166 GATATTGTGTAATGTGTCTCTAAAGACTATTACTTGACTATAAAAGTTGAATGAGATTTT 1225 Query 1219 ATT 1221 ||| Sbjct 1226 ATT 1228 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 59989651275 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5