BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg495755 Length=1150 Score E Sequences producing significant alignments: (Bits) Value AT5G56640.1 | Symbols: MIOX5 | myo-inositol oxygenase 5 | chr5:... 1786 0.0 AT4G26260.2 | Symbols: MIOX4 | myo-inositol oxygenase 4 | chr4:... 797 0.0 AT4G26255.1 | Symbols: | other RNA | chr4:13293941-13296465 FO... 69.4 7e-11 > AT5G56640.1 | Symbols: MIOX5 | myo-inositol oxygenase 5 | chr5:22927329-22929643 REVERSE LENGTH=1155 Length=1155 Score = 1786 bits (967), Expect = 0.0 Identities = 1095/1156 (95%), Gaps = 11/1156 (1%) Strand=Plus/Plus Query 1 GAAGATGACTATCTCCGTCGAAAACCCTGTTTTTGTACATGAGGACTCTACGACGCAGAA 60 |||||||| ||||||||||||||||||||||||||||||||||||||| || |||| | Sbjct 2 GAAGATGAATATCTCCGTCGAAAACCCTGTTTTTGTACATGAGGACTCGACAACGC---A 58 Query 61 GAAGACCGGAGAGTTACGAATGGACAGCGGA-ATACCAATGTCGAAGATATCATCCAATG 119 ||||||||||||||||||| |||||||| || |||||||||||||||||||||||| ||| Sbjct 59 GAAGACCGGAGAGTTACGATTGGACAGC-GACATACCAATGTCGAAGATATCATCCGATG 117 Query 120 ATGAAGTGTTTTTGGCTCCTGAGATGAACGCATTTGGTCGTCAATTCAGAGACTACACGG 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 118 ATGAAGTGTTTTTGGCTCCTGAGATGAACGCATTTGGTCGTCAATTCAGAGACTACACGG 177 Query 180 ATACAAATAGCGAGAGGCAAAAGAGCGTCGAACATTTCTATAAAACACAACACATTAACC 239 ||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct 178 ATACAAACAGCGAGAGGCAAAAGAGCGTCGAACATTTCTATGCAACACAACACACTAACC 237 Query 240 AAAGTTTGGACTTTGTAAAGAAAATGAGAAGTGAGTATGGAAAATTGGACAAGATGGTGA 299 ||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 238 AAACTTTAGACTTTGTACAGAAAATGAGAAGTGAGTATGGAAAATTGGACAAGATGGTGA 297 Query 300 TGAACATTTGGGAATGTTGTGAACTTTTAAACGAAGTGGTGGACGAGAGTGATCCCGACC 359 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct 298 TGAACATTTGGGAATGTTGTGAACTTTCAAAAGAAGTGGTGGACGAGAGTGATCCCGACC 357 Query 360 TCGACGAACCACAAATTCAACATTTGCTTCAATCTGCGGAAGCAATCCGTAAAGATTATC 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 358 TCGACGAACCACAAATTCAACATTTGCTTCAATCTGCGGAAGCAATCCGTAAAGATTATC 417 Query 420 CAAACGAAGATTGGCTTCACCTCACTGCTCTTATCCATGATCTTGGGAAGGTTCTTACTC 479 | ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| | Sbjct 418 CTAACGAAGATTGGCTTCATCTCACTGCGCTTATCCATGATCTTGGGAAGGTTCTTACCC 477 Query 480 TACCACAGTTTGGAGGGCTTCCTCAATGGGCTGTTGTTGGTGACACATTCCCTGTTGGGT 539 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 478 TACCACAGTTTGGAGGGCTTCCTCAATGGGCTGTTGTTGGTGACACATTTCCTGTTGGGT 537 Query 540 GTGCATTTGATGAATCTAACGTACACCACAAGTATTTTATGGAAAACGCTGATTTTAACA 599 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 538 GTGCATTTGATGAATCTAACGTACACCACAAGTATTTTATGGAAAACCCTGATTTTAACA 597 Query 600 ATCCAAAGTATAATACCAAAACTGGAATTTATTCTGAAGGATGTGGACTTGAGAATGTTC 659 | || ||||| ||||||||| ||||||||||||||||||| ||||||||||| ||||||| Sbjct 598 ACCCTAAGTACAATACCAAAGCTGGAATTTATTCTGAAGGCTGTGGACTTGAAAATGTTC 657 Query 660 TTATGTCATGGGGACATGATGACTACATGTATCTGGTGGCTAAGGAGAATGGAAGCACCC 719 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 658 TTATGTCATGGGGACATGATGACTACATGTATCTGGTGGCCAAGGAGAATGGAAGCACCT 717 Query 720 TACCATCCTCGGGACTATTCATCATCCGATACCATTCCTTTTATCCATTGCACAAGGCTG 779 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 718 TACCATCCCCGGGACTATTCATCATCCGATACCATTCCTTTTATCCATTGCACAAGGCTG 777 Query 780 GAGCTTACACTCACCTTATGAACGAAGAAGACAAGGAAAATCTCAAATGGCTCCATGTTT 839 ||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||| Sbjct 778 GAGCTTACACTCACCTTATGAACGAGGAAGACAAGGAGAATCTCAAATGGCTTCATGTTT 837 Query 840 TCAACAAGTACGACTTATACAGCAAGAGCAAAGTACACGTGGATGTCGAGAAGGTTAAGC 899 | |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 838 TTAACAAGTATGACTTATACAGCAAGAGCAAAGTACACGTCAATGTCGAGAAGGTTAAGC 897 Query 900 CGTACTACATGTCTCTTATCAAGAAATATTTCCCGGAAAATCTGAGGTGGTGAAAACTGC 959 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 898 CGTACTACATGTCTCTTATCAAGAAATATTTCCCGGAAAATCTGAGGTGGTGAAAACGGC 957 Query 960 ATCAAGGCCGTCCAAAAAA-GTCTACTATTAGAAAGATAAAAATGGTGAGTGTGATTGAT 1018 ||| ||||||||||||||| |||||||||||||||||||||| ||||| ||||| ||||| Sbjct 958 ATCGAGGCCGTCCAAAAAAAGTCTACTATTAGAAAGATAAAA-TGGTGTGTGTGTTTGAT 1016 Query 1019 TAGTAGTCGTTTAAG-AT-T-ATTGCCCAGTTGATAAAGTTGTATTGTTACATTAGCTAA 1075 || | |||||||||| || | ||||||||||| ||||||||||||||||||||||||||| Sbjct 1017 TACTTGTCGTTTAAGCATATTATTGCCCAGTTAATAAAGTTGTATTGTTACATTAGCTAA 1076 Query 1076 TGTTAATGCTAATGTTTATACAAACTATTATTGTATC-CGTCTGTCCTACTATAAATTAA 1134 |||||||||||||||| |||||||| | |||||||| ||||||||||| |||||| ||| Sbjct 1077 TGTTAATGCTAATGTTGATACAAACGGTAATTGTATCTCGTCTGTCCTATTATAAACTAA 1136 Query 1135 AATAATATTTTCTTCT 1150 ||| |||||||||||| Sbjct 1137 AATGATATTTTCTTCT 1152 > AT4G26260.2 | Symbols: MIOX4 | myo-inositol oxygenase 4 | chr4:13297803-13300319 FORWARD LENGTH=1266 Length=1266 Score = 797 bits (431), Expect = 0.0 Identities = 703/834 (84%), Gaps = 19/834 (2%) Strand=Plus/Plus Query 128 TTTTTGGCTCCTGAGATGAACGCATTTGGTCGTCAATTCAGAGACTACACGGATACAAAT 187 |||||||||||||||||||| |||||||| || |||||||| |||| || ||| | Sbjct 272 TTTTTGGCTCCTGAGATGAATGCATTTGGCCGCCAATTCAGGGACT--AC-GATGTTGAG 328 Query 188 AGCGAGAGGCAAAAGAGCGTCGAACA-TTTCTATAAAACACAACACATTAACCAAAGTTT 246 || |||||||||||| |||||||| | ||| || | | ||||||||| ||||||| | | Sbjct 329 AGTGAGAGGCAAAAGGGCGTCGAAGAGTTT-TACAGATTACAACACATCAACCAAACTGT 387 Query 247 GGACTTTGT-AAAGAAAATGAGAAG-TGAGTATGGAAAATTGGACAAGATGGTGATGAAC 304 |||||||| ||| || ||||| | ||| ||||||||||| || || |||||||||| | Sbjct 388 CGACTTTGTGAAA-AAGATGAG-GGCTGAATATGGAAAATTAGATAAAATGGTGATGAGC 445 Query 305 ATTTGGGAATGTTGTGAACTTTTAAACGAAGTGGTGGACGAGAGTGATCCCGACCTCGAC 364 ||||||||||||||||| ||| | || || || ||||| ||||||||||| || || ||| Sbjct 446 ATTTGGGAATGTTGTGAGCTTCTCAATGAGGTTGTGGATGAGAGTGATCCAGATCTTGAC 505 Query 365 GAACCACAAATTCAACATTTGCTTCAATCTGCGGAAGCAATCCGTAAAGATTATCCAAAC 424 || || || ||||| ||||||||||||||||| ||||| ||||| |||||||| || || Sbjct 506 GAGCCCCAGATTCAGCATTTGCTTCAATCTGCCGAAGCCATCCGCAAAGATTACCCTAAT 565 Query 425 GAAGATTGGCTTCACCTCACTGCTCTTATCCATGATCTTGGGAAGGTTCTTACTCTACCA 484 |||||||||||||| || || ||||||||||||||||||||||| ||| ||||||| ||| Sbjct 566 GAAGATTGGCTTCATCTGACCGCTCTTATCCATGATCTTGGGAAAGTTATTACTCTTCCA 625 Query 485 CAGTTTGGAGGGCTTCCTCAATGGGCTGTTGTTGGTGACACATTCCCTGTTGGGTGTGCA 544 || || ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 626 CAATTCGGAGGACTTCCTCAATGGGCTGTTGTTGGTGACACATTCCCTGTTGGATGTGCA 685 Query 545 TTTGATGAATCTAACGTACACCACAAGTATTTTATGGAAAACGCTGATTTTAACAATCCA 604 |||||||||||||||||||| |||||||| ||| |||||||| | |||||| |||| | | Sbjct 686 TTTGATGAATCTAACGTACATCACAAGTACTTTGTGGAAAACCCAGATTTTCACAA-CGA 744 Query 605 AAG-TATAATACCAAAACTGGAATTTATTCTGAAGGATGTGGACTTGAG-AATGTTCTT- 661 || || || || |||| ||| ||||| |||||||| |||||| || | ||||| | | Sbjct 745 AACCTACAACACTAAAAATGGGATTTACTCTGAAGGGTGTGGA-TTAAACAATGT-CATG 802 Query 662 ATGTCATGGGGACATGATGACTACATGTATCTGGTGGCTAAGGAGAATGGAAGCACCCTA 721 ||||| ||||| ||||| ||||||||||| ||||||||||| || || ||||| ||| | Sbjct 803 ATGTCTTGGGGCCATGACGACTACATGTACCTGGTGGCTAAAGAAAACGGAAGTACCTTG 862 Query 722 CCATCCTCGGGACTA-TTCATCATCCGATACCATTCCTTTTATCCATTGCACAAGGCTGG 780 || || | |||| | || ||||| |||||||||||||||| || ||||||| |||||| Sbjct 863 CCGTCGGCTGGAC-AGTTTATCATAAGATACCATTCCTTTTACCCTTTGCACACGGCTGG 921 Query 781 AGCTTACACTCACCTTATGAACGAAGAAGACAAGGAAAATCTCAAATGGCTCCATGTTTT 840 || ||||| || ||||||||||| ||||||||||| ||||| || ||||| || ||||| Sbjct 922 AGAATACACCCATCTTATGAACGAGGAAGACAAGGAGAATCTGAAGTGGCTACACGTTTT 981 Query 841 CAACAAGTACGACTTATACAGCAAGAGCAAAGTACACGTGGATGTCGAGAAGGTTAAGCC 900 ||||||||||||||| ||||| ||||||||||| ||||| ||||| |||||||| ||||| Sbjct 982 CAACAAGTACGACTTGTACAGTAAGAGCAAAGTTCACGTTGATGTGGAGAAGGTCAAGCC 1041 Query 901 GTACTACATGTCTCTTATCAAGAAATATTTCCCGGAAAATCT-GAGGTGGTGAA 953 |||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct 1042 TTACTACATGTCTCTTATCAAGAAATATTTCCCGGAAAA-CTTGAGGTGGTGAA 1094 > AT4G26255.1 | Symbols: | other RNA | chr4:13293941-13296465 FORWARD LENGTH=1222 Length=1222 Score = 69.4 bits (37), Expect = 7e-11 Identities = 54/62 (87%), Gaps = 2/62 (3%) Strand=Plus/Plus Query 517 TGGTGAC--ACATTCCCTGTTGGGTGTGCATTTGATGAATCTAACGTACACCACAAGTAT 574 ||||||| | ||||| |||| |||||||||||||||||||||||||||| ||| |||| Sbjct 528 TGGTGACATAGATTCCTTGTTAGGTGTGCATTTGATGAATCTAACGTACAACACGGGTAT 587 Query 575 TT 576 || Sbjct 588 TT 589 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 56425412580 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5