BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg495779
Length=3673
Score E
Sequences producing significant alignments: (Bits) Value
AT5G56890.1 | Symbols: | Protein kinase superfamily protein | ... 5343 0.0
> AT5G56890.1 | Symbols: | Protein kinase superfamily protein
| chr5:23010523-23015671 REVERSE LENGTH=3732
Length=3732
Score = 5343 bits (2893), Expect = 0.0
Identities = 3470/3738 (93%), Gaps = 81/3738 (2%)
Strand=Plus/Plus
Query 1 TCTTCTTCTGCCACTTCGATTGCTTTAAACTTGGAGCTTAAGATTACACATC----AATT 56
|||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct 3 TCTTCTTCTGCCACTTCGATTGCTTTAAACTTGGAGATTAAGATTACACATCAAATAATT 62
Query 57 CTTCTTTGTCTTCCTCGTGATCATCGAGGAAGCTTGATCTCTTCTATGGAATGGAGATTT 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 63 CTTCTTTGTCTTCCTCGTGATCATCGAGGAAGCTTGATCTCTTCTATGGAATGGAGAATT 122
Query 117 TGATTCTCCTCCTTTGGATCTGTCTTCTTTCGTCGGTTTTAGTTGTTGGTTCTTCTTCCT 176
||| |||||||||| ||||||||||| |||||||||||||||||| | | |||||||||
Sbjct 123 TGACTCTCCTCCTTAGGATCTGTCTTGTTTCGTCGGTTTTAGTTGCT-G--CTTCTTCCT 179
Query 177 CTGGATTGGATTTGTTACCTCCGTTATCATCACCACCGTCTCCACTACCGGAAACTTTAA 236
| |||| ||| |||||| |||||||||||||||||||||||||| |||| ||||||| ||
Sbjct 180 CAGGATCGGAATTGTTATCTCCGTTATCATCACCACCGTCTCCATTACCCGAAACTTCAA 239
Query 237 AAGGGTTTGGTCAAGCACCGAGTCATTCA-C----T-T---GAATCCGGCAATGTGCCGC 287
||||||||||||||||||||||| ||||| | | | |||||| ||||||||| |
Sbjct 240 AAGGGTTTGGTCAAGCACCGAGTAATTCACCTGAATCTCACAAATCCGACAATGTGCCAC 299
Query 288 CGTCTAAAG---CTTCTCAACCGTCTCTTCCTCCTTTAGCTGATGTGGCAGCTCCACCGC 344
||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct 300 CGTCTAAAGCTTCTTCTCAACCGTCTCTTCCTCCTTTAGCTGATTTGGCAGCTCCACCAC 359
Query 345 CGTCAGATTCCGCCGGAGGTAATGCACCGGCCGGTGTGCCTTTTGTCTTGGTTCCTAATG 404
|||||||||||| ||||||||| |||||||||||||||||| ||||||| ||||||||||
Sbjct 360 CGTCAGATTCCGTCGGAGGTAAAGCACCGGCCGGTGTGCCTGTTGTCTTTGTTCCTAATG 419
Query 405 CTCCAGCTCCAGC-AGCAATACCCGTGAAGGATTTGCCCGGAACTTCGCCTCCGG---TT 460
||||||||||||| | |||||||||| ||||||||||||| | |||||||||||| ||
Sbjct 420 CTCCAGCTCCAGCTA-CAATACCCGTTAAGGATTTGCCCGTAGCTTCGCCTCCGGTTCTT 478
Query 461 CAACCCATTACACCGGTTGCTTCACCACCTCAATTCGTTCCAGGAGATGCACCAAAGGAG 520
||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||
Sbjct 479 CAACCCATTACACCGATTGCTTCACCACCTCGATTCATTCCAGGAGATGCACCAAAGGAG 538
Query 521 CCTCCTTTCTCAGGAAGAGTTACTCCGGGCCCAATTTCATCCCCTGTTTCGGATATTCCT 580
|||||||||||||||||||||||||| | ||| ||||||| ||||||||||||||||||
Sbjct 539 CCTCCTTTCTCAGGAAGAGTTACTCCAGCCCCGGTTTCATCACCTGTTTCGGATATTCCT 598
Query 581 CCAATTCCATCAGTGGCTCTATCTCCGCCTACACCGAGCATTGTACCTCCTAGAAATGCT 640
|||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct 599 CCAATTCCATCAGTGGCTCTGCCTCCGCCTACACCGAGCAATGTACCTCCTAGAAATGCT 658
Query 641 TCTAACAATCACAAG---CCTCCTATCGAAAAGCCTAGTGCTCCTGTTGCATCTCCACCA 697
||||||||||||||| ||||||||||||||| ||| ||||||||||||||| ||||||
Sbjct 659 TCTAACAATCACAAGCCTCCTCCTATCGAAAAGTCTATTGCTCCTGTTGCATCACCACCA 718
Query 698 ACAATATTTATTGACATTTCACCGCCAGTCCATCCCGTCATACCCAAGTTAACACCCTCT 757
||||||| ||||||||| |||| ||||| |||||||||||||| ||||||||||||||
Sbjct 719 ACAATATCAATTGACATTGCACCACCAGTACATCCCGTCATACCTAAGTTAACACCCTCG 778
Query 758 AGTTCACCTGTACCCACCTCGACTCCAACTAAGGGATCTCCAAGAAGAAATCCGCCAACT 817
|| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 779 AGCTCACCTGTACCTACCTCGACTCCAACTAAGGGATCTCCGAGAAGAAATCCGCCAACT 838
Query 818 ACGCACCCAGTATTCCCCATAGAATCTCCTGCCGTCTCACCAGATCCTGCTGCAAATCCA 877
|| |||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 839 ACCCACCCAGTTTTCCCCATAGAATCTCCTGCTGTCTCACCAGATCATGCTGCAAATCCA 898
Query 878 GTAAAACATCCACCACCCAGTGATAATGGAGATGATAACAAAAGTCCGGGTGCTGCACCT 937
||||||||||| || ||||| ||||| |||||||||| ||||||||||||||||||||
Sbjct 899 GTAAAACATCCGCCCCCCAGCGATAACGGAGATGATAGTAAAAGTCCGGGTGCTGCACCG 958
Query 938 TCAAATGAAACTGCTAAACCCTTACCTGTCTTCCCACATAAAGCTTCTCCTCCTTCGATA 997
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 959 GCAAATGAAACTGCTAAACCCTTACCTGTCTTCCCACATAAAGCTTCTCCTCCTTCGATT 1018
Query 998 GCTCCCTCAGCCCCAAAATTCAACAGACACTCTCATCATACATCTCCATCTACTACTCCA 1057
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1019 GCTCCCTCAGCCCCAAAATTTAACAGACACTCTCATCATACATCTCCATCTACTACTCCA 1078
Query 1058 CCGCCAGATTCTACTCCGCGTAATGTACACCGCcatccttcatcatcatctcctcctcct 1117
||||||||||||||||| |||||||||||| ||||||||||||| || | ||||||||
Sbjct 1079 CCGCCAGATTCTACTCCTAGTAATGTACACCACCATCCTTCATCACCA--T-CTCCTCCT 1135
Query 1118 cctctatcttcacaccatcaacatcatcaAGAACGAAAGAAAATCACAAATAGTCCAGCT 1177
||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct 1136 CCTCTATCTTCACACCATCAACATCATCAAGAACGAAAGAAAATCGCAGATAGTCCAGCT 1195
Query 1178 CCTTCGCCACCACCACCGCACCTCATATCTCCAAAGAAGTCAAACCGTAAAGGTTTAATG 1237
||||| |||| |||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct 1196 CCTTCACCACTGCCACCGCATCTCATATCTCCAAAGAAGTCAAACCGTAAAGGTTCAATG 1255
Query 1238 ACTCCTCCTCCATC-ATCACATCATGCTCCTTCTCCTCCCATTCCTGCTTCTTTGATTTC 1296
|||||||||||| | ||| || ||||||||||||||||||||||||| ||||||||||||
Sbjct 1256 ACTCCTCCTCCA-CAATCGCACCATGCTCCTTCTCCTCCCATTCCTGATTCTTTGATTTC 1314
Query 1297 TCCGGCTCACGCTCCAATCCCTTCCACTATGCAACGCATCTCCCCGGCTTC-AGCACCTT 1355
||| |||||||||||| || ||| | ||||| |||||||||||||||| || ||||||||
Sbjct 1315 TCCTGCTCACGCTCCAGTCTCTTTCTCTATGAAACGCATCTCCCCGGC-TCTAGCACCTT 1373
Query 1356 CTCCAACCCAAGTGTTTCCTCTCAGGTCCTCTTCAAGACCTTCAAAATCTCGGAAATTCC 1415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1374 CTCCAACCCAAGTGTTTCCTCTCAGGTCCTCTTCAAGACCTTCAAAATCTCGGAAATTCC 1433
Query 1416 CACTCGGTCCACCGCTTCAAGCATTTCCCCCTCCTCCCCCTAATTCAGATTGTACTTCAA 1475
| || |||||||| |||||||||||||| |||||||||||||||||||||||| ||||||
Sbjct 1434 CTCTAGGTCCACCTCTTCAAGCATTTCCTCCTCCTCCCCCTAATTCAGATTGTTCTTCAA 1493
Query 1476 CTATTTGCTTGGAACCGTACACAAACACACCTCCAGGATCTCCATGTGGCTGTGTCTGGC 1535
||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1494 CTATTTGTTTGGAACCGTACACAAACACACCTCCGGGATCTCCATGTGGCTGTGTCTGGC 1553
Query 1536 CAATTCAGGTTGAGCTACGGCTTAGCATGGCGCTCTACGACTTCTTCCCAATGGTTTCAG 1595
||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1554 CAATTCAAGTTGAGCTACGCCTTAGCATGGCGCTCTACGACTTCTTCCCAATGGTTTCAG 1613
Query 1596 AATTTGCTCGAGAAATCAGCGCCGGGGTTTTCATGAAACAGAGCCAAGTCCGTATAATGG 1655
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1614 AATTTGCTCGGGAAATCAGCGCCGGAGTTTTCATGAAACAGAGCCAAGTCCGTATAATGG 1673
Query 1656 GAGCTAACGCGGCTAGCGAACAACCTGACAAATCCATTGTTCTTATCGATTTAGTCCCGC 1715
||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| ||||
Sbjct 1674 GAGCTAACGCGGCCAGCGAACAACCTGAGAAATCCATTGTTCTAATCGATTTAGTACCGC 1733
Query 1716 TTGGAGATAAATTCGATAACATGACTGCAATGGTGACTTACCAGAGATTCTGGAGTAAAA 1775
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1734 TTGGAGATAAATTCGATAACATGACTGCAATGCTGACTTACCAGAGATTCTGGAGTAAAA 1793
Query 1776 AAGTCTATATAGATGAACCAATCTTTGGCGGATACGATGTGATTTACGTGCGTTATCCTG 1835
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1794 AAGTCTATATAGATGAACCAATCTTTGGCGGATACGACGTGATTTACGTGCGTTATCCTG 1853
Query 1836 GTTTACCGGCTTCCCCGCCAACTTCCGGTATGACCATTATAGATCAAGGGCCATACTCTG 1895
||||||| ||||||||||||||||| ||||||||||||||||||||||| || |||||||
Sbjct 1854 GTTTACCCGCTTCCCCGCCAACTTCTGGTATGACCATTATAGATCAAGGACCGTACTCTG 1913
Query 1896 GTAATAATAACGGAAGGGCGATCAAACCGCTCGGAGTTGATGTTCCAAAGAAGCCGCACA 1955
|||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||
Sbjct 1914 GTAATAATAACGGAAGGGCGGTCAAACCGCTCGGAGTTGATGTTCCAAGGAAGCCGCGCA 1973
Query 1956 AGAAAAACCTCAATGCTGGAAGTATTGCTGTGATTGTTTTATCGGCAGCTGCTTTTATCG 2015
||||| | ||||||| ||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1974 AGAAAGAGCTCAATGGTGGAAGTATTGCTGTGATTGTTTTATCCGCAGCTGCTTTTATCG 2033
Query 2016 GTTTATGTTTCATTATTGTTTGGTTCTTGGTTTTCCGGCGACAAAGAGATAGACGGCGTC 2075
||||||||||| |||| ||||||||||||||||||||||||||||||||| |||| ||||
Sbjct 2034 GTTTATGTTTCGTTATCGTTTGGTTCTTGGTTTTCCGGCGACAAAGAGATCGACGACGTC 2093
Query 2076 TTTCTAAAAGAGCACCACTTCCTCGCCCTTCACTGCCTTCCCTCTCGAAACCATCAGGCT 2135
|||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2094 TTTCGAAAAGAACACCACTTGCTCGCCCTTCACTGCCTTCCCTCTCGAAACCATCAGGCT 2153
Query 2136 CGGCGAGATCTTTAACTGGAAGCCGGTTTAGCTCAACTTCGTTGTCATTTGAATCCAGCA 2195
||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct 2154 CGGCGAGATCTTTAACTGGAAGCCGATTTAGCTCAACTTCATTGTCATTTGAATCCAGCA 2213
Query 2196 TTGCTCCGTTTACTCTCTCTGCAAAGACATTCACCGCAAGCGAAATAATGAAAGCTACTA 2255
|||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |
Sbjct 2214 TTGCTCCGTTTACTCTCTCTGCAAAGACTTTCACCGCAAGTGAAATAATGAAAGCTACAA 2273
Query 2256 ATAACTTTGATGAATCGAGGGTTCTTGGTGAAGGCGGATTTGGACGAGTTTATGAAGGTG 2315
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2274 ATAACTTTGATGAATCGAGGGTTCTTGGTGAAGGCGGATTTGGACGAGTTTACGAAGGTG 2333
Query 2316 TTTTCGATGGCGGAACTAAAGTAGCAGTTAAGGTATTGAAGAGAGATGACCAGCAGGGTA 2375
||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2334 TTTTCGATGACGGAACTAAAGTAGCAGTTAAGGTATTGAAGAGAGATGACCAGCAAGGTA 2393
Query 2376 GCCGAGAGTTCTTGGCCGAAGTGGAAATGCTTAGTCGTCTTCATCACAGAAACCTCGTGA 2435
|| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2394 GCAGGGAGTTCTTAGCCGAAGTGGAAATGCTTAGTCGTCTTCATCACAGAAACCTCGTGA 2453
Query 2436 ATTTAATTGGTATTTGTATCGAAGATCGTAACCGTTCCCTTGTTTATGAACTCATACCAA 2495
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2454 ATTTAATTGGTATTTGTATCGAAGATCGTAACCGTTCCCTGGTTTATGAACTCATACCAA 2513
Query 2496 ATGGCAGCGTTGAATCTCACCTCCACGGAATCGATAAAGAATCTTCGCCTTTAGATTGGG 2555
|||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||
Sbjct 2514 ATGGCAGCGTTGAATCTCACCTCCACGGGATTGATAAAGCATCTTCGCCTTTAGATTGGG 2573
Query 2556 ATGCTCGGTTGAAGATAGCTCTTGGTGCAGCCCGTGGTTTAGCGTATTTACACGAAGACT 2615
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2574 ATGCTCGGTTGAAGATAGCTCTTGGTGCGGCCCGTGGTTTAGCGTATTTACACGAAGACT 2633
Query 2616 CAAGTCCGCGAGTTATACACAGAGACTTCAAGTCCAGCAACATCTTGCTTGAAAACGATT 2675
| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2634 CGAGCCCGCGAGTTATACACAGAGACTTCAAGTCCAGCAACATCTTGCTGGAAAACGATT 2693
Query 2676 TCACACCTAAAGTCTCGGACTTTGGATTGGCTCGTAACGCCCTTGATGATGAAGATAACA 2735
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2694 TCACACCTAAAGTATCTGACTTTGGATTGGCTCGTAACGCCCTTGATGATGAAGATAACA 2753
Query 2736 GACATATATCAACACGCGTTATGGGAACTTTTGGGTATGTGGCGCCGGAATATGCAATGA 2795
|||||||||| ||||||||||||||||| |||||||||||||| |||||||| |||||||
Sbjct 2754 GACATATATCGACACGCGTTATGGGAACGTTTGGGTATGTGGCACCGGAATACGCAATGA 2813
Query 2796 CGGGGCATCTTTTGGTGAAGAGTGATGTGTATAGTTACGGAGTTGTGCTTCTGGAGCTAC 2855
| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2814 CAGGGCATCTTTTGGTGAAGAGTGATGTGTATAGTTACGGAGTTGTGCTTCTCGAGCTAC 2873
Query 2856 TTACAGGTCGGAAACCAGTGGATATGTCTCAACCACCCGGACAAGAGAACTTAGTTTCAT 2915
||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2874 TTACAGGGCGGAAACCAGTGGATATGTCTCAACCGCCCGGACAAGAGAACTTAGTTTCAT 2933
Query 2916 GGACTCGGTCTTTTCTTACGAGCACAGAAGGGCTTGCAGCTATTATAGATCAGTCTTTAG 2975
|||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2934 GGACTCGGCCTTTTCTTACGAGTGCAGAAGGGCTTGCAGCTATTATAGATCAGTCTTTAG 2993
Query 2976 GACCCGAGATCTCATTCGATAGCATAGCTAAAGTCGCGGCGATAGCTTCGATGTGCGTTC 3035
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct 2994 GACCCGAGATCTCATTCGATAGCATAGCTAAAGTCGCGGCAATAGCTTCTATGTGCGTTC 3053
Query 3036 AACCGGAAGTATCACACCGTCCTTTCATGGGAGAAGTAGTGCAAGCTTTGAAACTTGTCA 3095
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3054 AACCAGAAGTATCACACCGTCCTTTCATGGGAGAAGTAGTGCAAGCTTTGAAACTTGTCA 3113
Query 3096 GCAACGAATGCGATGAAGCTAAAGAACTCAACTCTGTAACTTCAATCACTCAAGACGATT 3155
|||||||||| |||||||||||||||||||| ||| ||||||| ||| || |||||||||
Sbjct 3114 GCAACGAATGTGATGAAGCTAAAGAACTCAATTCTTTAACTTCTATCTCTAAAGACGATT 3173
Query 3156 TTAGAGATGACACTCAAGCTGAGAGCTCTTGTGGTGA-AGGCTCAGCGAGGATGGCTCGG 3214
||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||
Sbjct 3174 TTAGAGATGACACTCAAGCTGAGAGCTCTTGTGGTGACAG-CTCAGCAAGGATGGCTCGG 3232
Query 3215 TATCCATTGCTACCGAATTACGACTCTGAGCCTGACACAGAGAGAGGACTATCTACATCG 3274
|||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||||
Sbjct 3233 TATCCATTGCTACCAAATTACGACTCTGAGCCTGATACAGAGAGAGGATTATCTACATCG 3292
Query 3275 GAAATGTACTCGGAGTCAGGGAGGTTTGAGAGACAGTCTAACTCGGGTCCCTTGACCTCA 3334
||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 3293 GAAATGTACACGGGGTCAGGGAGGTTCGAGAGACAGTCTAACTCGGGTCCCTTGACCTCG 3352
Query 3335 GGTCGAGGCAAGAGGTTCTGGCAAAAGATGAGAAGATTATCAACCGGAAGCTTGAGTGAG 3394
|||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct 3353 GGTCGAGGCAAGAGTTTCTGGCAAAAGATGAGGAGATTATCGACCGGAAGCTTGAGTGAG 3412
Query 3395 CATGGAACACCAACGGTGATGTTACGATCCGGTTCTCG-T------T-----G---A-A- 3437
||||||||||||||||| |||||||||||||||||||| | | | | |
Sbjct 3413 CATGGAACACCAACGGTCATGTTACGATCCGGTTCTCGCTAAACAATCTTTTGCCTACAG 3472
Query 3438 AAT--TG--GAGTCTTTAATAGCCCGTTTAAGTTAA-A-A--GAAAGCA--G--G-TGCC 3484
|| || |||| ||| || ||||||||||||||| | | ||||| | | | ||||
Sbjct 3473 AACACTGAAGAGTTTTTGATTGCCCGTTTAAGTTAAGAGACTGAAAGGAAAGAAGGTGCC 3532
Query 3485 TTGTCCTACAAGCAA--CTCTTTGCCTCATGGAAACCGCTTAAGAGAAAACCGGGAGAGA 3542
|| |||||||||||| ||||||||||||||||||||| |||||| |||||| |||| ||
Sbjct 3533 TTCTCCTACAAGCAAAACTCTTTGCCTCATGGAAACCGGTTAAGATAAAACCAGGAGTGA 3592
Query 3543 TCATCATTCCCGGTTCAACAATT---AGTTGAATAGATCT-TTGTATCTTAGAAGAA-A- 3596
|||| |||||||||||| |||| |||||||||||||| || ||||| ||||||| |
Sbjct 3593 TCAT--TTCCCGGTTCAA-AATTTTTAGTTGAATAGATCTGTT-TATCTGAGAAGAAGAA 3648
Query 3597 -CAAGAGATTCTGTTTAATCTAATTTGAATGTACATATCAAGTTTTAAAGTAAGAGAGGC 3655
|||||||||||||| |||||||||||||||||||||||| |||||||||||| || | |
Sbjct 3649 ACAAGAGATTCTGTTAAATCTAATTTGAATGTACATATCACGTTTTAAAGTAACAG-G-C 3706
Query 3656 TTAAGCATTAAGCATCAT 3673
|||||||||||| |||||
Sbjct 3707 TTAAGCATTAAGTATCAT 3724
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 182908674178
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5