BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg495950
Length=2487
Score E
Sequences producing significant alignments: (Bits) Value
AT5G58350.1 | Symbols: WNK4, ZIK2 | with no lysine (K) kinase 4... 3875 0.0
> AT5G58350.1 | Symbols: WNK4, ZIK2 | with no lysine (K) kinase
4 | chr5:23584789-23587801 FORWARD LENGTH=2552
Length=2552
Score = 3875 bits (2098), Expect = 0.0
Identities = 2388/2522 (95%), Gaps = 43/2522 (2%)
Strand=Plus/Plus
Query 1 AGGAACTGGCTGCCAACaaaaaaaaaaCAATTGTTCAGCGGTGATGTCACTATCACTCTA 60
|||||||||| ||||||||||| ||||||||| |||| ||||||||||||||||||||||
Sbjct 1 AGGAACTGGCCGCCAACAAAAACAAAACAATT-TTCAACGGTGATGTCACTATCACTCTA 59
Query 61 TTCTCTACAACTTCTTGTCATGTTCCCCACTTCTGTTCTGACTTTTCCCCTTTTCTTTGT 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 60 TTCTCTACAACTTCTTGTCATGTTCCCCACTTCTGTTCTGACTTTTCCCCTTTTCTTTGT 119
Query 121 CATTTTATTTTTGTTAACCTCAATC----TATTTTGGATTGCTTGTGTTCACCAAACTAA 176
| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 120 CGTTTTATTTTTGTTAACCTCAATCTATTTATTTTGGATTGCTTGTGTTCACCAAACTAA 179
Query 177 TAATTGGTTCAATTGAAAAATGTGCAGTTTCCTCAAGAAACAAAACTCTTTCCTCTATAT 236
||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct 180 TAATTGGTTCAATTGAAAATTGTGCAGTTTCCTCAAGAAACAAAACTCTTTCCTGAATAT 239
Query 237 CGCATTTCCTAGTATCCACACTTTCTTAACTCTTATCCTCTTTGCAATTGTGTTTGTGGT 296
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 240 CGCATTTCCCAGTATCCACACTTTCTTAACTCTTATCCTCTTTGCAATTGTGTTTGTGGT 299
Query 297 TCACAAAATAAACCAGGGCATCTTTTGAGCATATTTTGCTATGT-TTTTCAATGTGGTAC 355
||||||||||||| |||||||||||||||||||||| || |||| |||||||||||||||
Sbjct 300 TCACAAAATAAACAAGGGCATCTTTTGAGCATATTTAGCCATGTGTTTTCAATGTGGTAC 359
Query 356 ACGTTTGATG-----------A------t--ttt---t-t-tt-tATTGGCAAGTAAGTT 390
|||||||||| | | ||| | | || |||||||||||||| |
Sbjct 360 ACGTTTGATGATTTTTTTTTCATTTTTGTGGTTTGAGTATCTTGTATTGGCAAGTAAGAT 419
Query 391 TTGTCAAACTTTGGATTTTTTGAATTACTACAA-TGCGGTCAATAAAAATAAAAATATGG 449
|||||||||||| ||||||| | ||| ||||| || |||||||||||||||| |||||
Sbjct 420 TTGTCAAACTTTCGATTTTTAG-ATT--TACAATTG-GGTCAATAAAAATAAATATATGA 475
Query 450 TTTTCTATAATATATGTGATGCAAGCAAGGTTAAGGC-AATTGTCTTTATTCATTTTATC 508
||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct 476 TTTTCTATAATATATGTGATGCAAGCAAGGTTAAGGCAAATTGTCTTTATTCTTTTTATC 535
Query 509 CCAAATGGGTGATTGACGCCAACGACTGTTCAACATATTTTCTGCTGACGCTTCTTTAAT 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 536 CCAAATGGGTGATTGACGCCAACGACTGTTCAACATATTTTCTGCTGACGCTTCTTTAAT 595
Query 569 GAAGTAGCAAGAAGAAAGTAAATAGGACGACTTTTGGCCACCAG-AAGTATCTCTGTTTT 627
||||||||| |||| ||||||| ||||||||||||||||||| | || | |||||||| |
Sbjct 596 GAAGTAGCACGAAG-AAGTAAACAGGACGACTTTTGGCCACCGGAAAATTTCTCTGTTAT 654
Query 628 AAGAACGAAAGTCTGTGTCCTCTTAAACATTTCTGGGATCATCAATTGGTTTTTGGTCAA 687
|| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 655 AAAAACGAAAGTCTGTGTCCTCTTAAACATTTTTGGGATCATCAATCGGTTTTTGGTCAA 714
Query 688 CCATGAATATGAATCAAGTTGCAGAGTATGTCGAAACTGATCCAACTGGTCGCTATGGAC 747
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 715 CCATGAATATGAATCAAGTTGCAGAGTATGTGGAAACTGATCCAACTGGTCGCTATGGAC 774
Query 748 GTTTTGCAGAAATTCTTGGAAGGGGAGCGATGAAGACAGTATACAAAGCAATCGATGAGA 807
|||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct 775 GTTTTGCAGAAATTCTTGGAAGGGGAGCGATGAAGACAGTGTACAAAGCAATCGACGAGA 834
Query 808 AGCTGGGAATAGAAGTAGCATGGAGCCAAGTGAAGCTTAAAGAGGTTCTGCGTTCATCTG 867
|||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||
Sbjct 835 AGCTGGGAATAGAAGTAGCATGGAGCCAGGTGAAGCTTAAGGAGGTTCTGCGTTCCTCTG 894
Query 868 TTGATCTACAGAGGCTTTACTCCGAGGTTCATCTCCTCAGCACTCTCAACCACAAATCTA 927
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 895 TTGATCTACAGAGGCTTTACTCCGAGGTTCATCTCCTCAGCACTCTCAACCACAAATCCA 954
Query 928 TCATTCGTTTCTACACTTCCTGGATTGATGTTCATAACCATACTCTCAACTTCATCACCG 987
||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct 955 TCATTCGTTTCTACACTTCCTGGATCGATGTTCATAACCACACTCTCAACTTCATCACCG 1014
Query 988 AGTTGTTCACTTCTGGGACCCTCCGACAATACAAAAATAAGTACTTGCGGATAGATATCC 1047
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1015 AGTTGTTCACTTCAGGGACCCTCCGACAATACAAAAATAAGTACTTGCGGATAGATATCC 1074
Query 1048 GAGCAATCAAGTCCTGGGCTCGGCAAATCTTGGAAGGGCTTGTTTATCTCCACGGA-CAC 1106
|||||||||||||||||||||||||||||||||||||||| |||||||||||| || |||
Sbjct 1075 GAGCAATCAAGTCCTGGGCTCGGCAAATCTTGGAAGGGCTAGTTTATCTCCAC-GAGCAC 1133
Query 1107 GACCCTCCTGTTATCCATAGAGACCTCAAGTGTGATAATATCTTTGTTAATGGGCATCTT 1166
|||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct 1134 GACCCTCCTGTTATCCATAGAGACCTTAAGTGTGATAATATCTTTGTGAATGGGCATCTT 1193
Query 1167 GGACAAGTCAAAATTGGTGATCTTGGTCTTGCAAGAATGCTGCGGGACTGCCATTCTGCG 1226
||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct 1194 GGACAAGTCAAAATTGGTGATCTTGGTCTTGCAAGAATGCTGCGGGACTGCCACTCGGCC 1253
Query 1227 CATAGTGTCATCGGCACTCCGGAGTTCATGGCTCCAGAATTATATGAGGAGAACTATAAT 1286
||||| |||| |||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct 1254 CATAGCATCATTGGCACTCCTGAGTTCATGGCACCAGAATTATATGAGGAGAACTATAAT 1313
Query 1287 GAGCTCATTGACGTTTATTCCTTTGGTATGTGCTTTTTGGAGATGATCACTTCTGAGTTC 1346
|| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1314 GAACTCATTGACGTATATTCCTTTGGTATGTGCTTTTTGGAGATGATCACCTCTGAGTTC 1373
Query 1347 CCGTATAGTGAGTGCAACAATCCGGCGCAAATTTACAAGAAAGTTGTCGCGGGAAAGCTA 1406
|||||||||||||||||| ||||||| || ||||||||||||||||| | ||||||||||
Sbjct 1374 CCGTATAGTGAGTGCAACCATCCGGCACAGATTTACAAGAAAGTTGTTGGGGGAAAGCTA 1433
Query 1407 CCAGGAGCCTTTTACAGAGTTGGAGACATTGAGGCACAGAGGTTCATCGGAAAATGTCTC 1466
|||||||| |||||||||||||||||||| |||||||||||||||||||| ||||| |||
Sbjct 1434 CCAGGAGCATTTTACAGAGTTGGAGACATCGAGGCACAGAGGTTCATCGGGAAATGCCTC 1493
Query 1467 GTGTCTGCCTCAAAGAGAGTATCAGCAAACGAACTATTGCAAGATCCATTTCTTGCCTCA 1526
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1494 GTGTCTGCCTCAAAGAGAGTATCAGCAAAAGAACTATTGCAAGATCCATTTCTTGCCTCC 1553
Query 1527 GATGAGTCCTGGATGGTGTACGCGAGTGGTGCTGGGAATCCAAAGCCCTTCTTGAACGAG 1586
||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||
Sbjct 1554 GATGAGTCCTGGATGGTATACACGAGCGGTGCTGGGAATCCAAAGCCCTTCTTGAACGAG 1613
Query 1587 AATGAAATGGACTCACTGAAGTTGGAAGATGATGAGTTAAAGACAC-AAATGTCCATCGC 1645
|||||||||||| ||||||||||||||||||||||||||| ||| | | |||||||||||
Sbjct 1614 AATGAAATGGACACACTGAAGTTGGAAGATGATGAGTTAAGGAC-CGAGATGTCCATCGC 1672
Query 1646 TGGGAAGCTGGGCGCTGAAGATAACAAAATCGATCTGGAAGTACAAATCGCATATGATAA 1705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1673 TGGGAAGCTGGGCGCTGAAGATAACAAAATCGATCTGGAAGTACAAATCGCATATGATAA 1732
Query 1706 TGGTCTGGCAAATAATGTGTTCTTCCCCTTTGACATCATGAATGATACTTCCATTGATGT 1765
||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct 1733 TGGTCTGGCCAATAATGTATTCTTTCCCTTTGACATCATGAATGATACTTCCATTGATGT 1792
Query 1766 TGCAAAGGAGATGGTAAAAGAACTCGAGATTATAGATTGGGAGCCAGTCGAGATTGCTAA 1825
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1793 TGCAAAGGAGATGGTAAAAGAACTCGAAATTATAGATTGGGAGCCAGTCGAGATTGCTAA 1852
Query 1826 AATGATTGATGGAGCGATTTCTTCTTTGGTGCCTGGTTGGAAGTATGAGGAAGATGATGA 1885
||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct 1853 AATGATTGATGGAGCGATTTCTTCTTTGGTGTCTGATTGGAAGTATGAGGAAGATGATGA 1912
Query 1886 AAGCCCTCATGATCATCATCGTCATCGTACCGATCCTTTCCACTCTTCTTCCTCGCACTC 1945
|| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |
Sbjct 1913 AACCCCTCATGATCATCATCGTCATCGTACCGATTCTTTTCACTCTTCTTCCTCGCACGC 1972
Query 1946 GTCATCTTCCCAAGCTTCACTCTCTAACTATATGGCACGAGGCCTTCAAGATTGGGTACA 2005
|||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 1973 GTCATCTTCCCAAGCTTCACTCTCGAACTATATGGCTCGAGGCCTTCAAGATTGGGTACA 2032
Query 2006 AGATGATTTACACGATGAGACGTATTCTCAGAGTTCTTCCCATTCAGGGTCTTACTCCAA 2065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2033 AGATGATTTACACGATGAGACGTATTCTCAGAGTTCTTCCCATTCAGGGTCTTACTCCAA 2092
Query 2066 CCTCAACTACATAGCTGTTGATGAGCACAGCTCCCAATCTCCTGCTATGAGCAGAACTCA 2125
||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct 2093 CCTCAACTACATAGCTGTTGATGAGTACAGCTCCCAATCTCCTGTTATGAGCAGAACTCA 2152
Query 2126 CAACTTGACGAGGTTTTGCCCCGAAGAAAGCTCTCATCAACAGTCAGGACAAGCCAACGC 2185
|||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2153 CAACATGACGAGGTTTTGCCCCGAAGAAAGCTCTCATCTACAGTCAGGACAAGCCAACGC 2212
Query 2186 GTATGCAGCTTCCAGTTCAATTAACAGATGCTTGGCTTCAGACAACCGCACACTTACAAG 2245
|||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct 2213 GTATGCAGCTTCCAGTTCAACTAACAGAAGCTTGGCTTCAGACAACCGCACACTTACAAG 2272
Query 2246 GAACCGATCACTTGTAGACGTGCAGAGACAGTTACTGCACCGGTCGCCAGGGGAAGAGGC 2305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2273 GAACCGATCACTTGTAGACGTGCAGAGACAGTTACTGCACCGGTCGCCAGGGGAAGAGGC 2332
Query 2306 TAGAAAAAGAAGATTGTTCAAAACTGTTGGAGACGTAGAAACAGTTGGGTTTCAGTCGCC 2365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2333 TAGAAAAAGAAGATTGTTCAAAACTGTTGGAGACGTAGAAACAGTTGGGTTTCAGTCACC 2392
Query 2366 TTATGCGGTTTCACGTAAGCCACCAAGCTCAAGGCGCTAGCTTCTCCAGTATTTTAATTA 2425
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2393 TTATGCGGTTTCACGGAAGCCACCAAGCTCAAGGCGCTAGCTTCTCCAGTATTTTAATTA 2452
Query 2426 CTGTAATATATAAGTATACTGTGAGAAAGAAGTTTGCTGGTTCAAAAATGTAAAAAGTTC 2485
|||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||| |
Sbjct 2453 CTGTAATATATAAGTATACTGTAAAAAACAAGTTTGCTGGTTCAAAAATGTAAAAAGTAC 2512
Query 2486 AT 2487
||
Sbjct 2513 AT 2514
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 123410679780
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5