BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg495955
Length=1900
Score E
Sequences producing significant alignments: (Bits) Value
AT5G58380.1 | Symbols: CIPK10, PKS2, SIP1, SNRK3.8 | SOS3-inter... 2761 0.0
AT5G07070.1 | Symbols: CIPK2, SnRK3.2 | CBL-interacting protein... 826 0.0
> AT5G58380.1 | Symbols: CIPK10, PKS2, SIP1, SNRK3.8 | SOS3-interacting
protein 1 | chr5:23596962-23599242 REVERSE LENGTH=1963
Length=1963
Score = 2761 bits (1495), Expect = 0.0
Identities = 1811/1952 (93%), Gaps = 68/1952 (3%)
Strand=Plus/Plus
Query 1 GTGGACCGCCAATGACGTTTAACTTGGTTTTCAtctcttcttcttctttcttcttctttc 60
||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |
Sbjct 1 GTGGACCGCCAATGACGTTTAACTTCGTTTTCATCTCTTCTTCTTC-TTCTTCTTC---C 56
Query 61 ttcttctCCTCCAtttttttGTTGAAAAACCCAGAAATAAATAAGGAAAGAGAAGGGGCC 120
|||||||||||| ||||||||| ||||||||||| |||||||| |||||||||||||
Sbjct 57 GTCTTCTCCTCCA--TTTTTGTTGGTAAACCCAGAAAGAAATAAGG-AAGAGAAGGGGCC 113
Query 121 TTTAGGGGCGGATAGAGAGATCTACACGTCTTTGTACTAGAGATCTCGGATTCATTCCCA 180
||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct 114 TTTAGGGGCGGATAGAGAGATCTACACGTCTTTCTACT--AGATCTCGGATTCATTCCCA 171
Query 181 GAATCCTCTATCGTCACCGTCTCATTTCTACCAAGACTCTGGGAGGTTTATTCATATTCG 240
||||||||| || |||||| |||| |||||||||| ||| ||||||||||||||||||
Sbjct 172 GAATCCTCTTTCCTCACCGGCTCAATTCTACCAAGTTTCTAAGAGGTTTATTCATATTCG 231
Query 241 GCATAGAAACTCAAGAAATGCTGGATGATGTGTCCTCCTATCACTAGGGCATTAGCTGCA 300
|||||||||||| ||||||| |||| ||||||||||||||||||||||| ||||||||||
Sbjct 232 GCATAGAAACTC-AGAAATGGTGGAGGATGTGTCCTCCTATCACTAGGGGATTAGCTGCA 290
Query 301 CGAGCTCATGAGGTTATGATGACTCATGAGCTACCACAAACTCTGAGCTATCTCTGGAGC 360
||||||||||||| | | ||||||||||||||||| | |||||||||||||||||||| |
Sbjct 291 CGAGCTCATGAGG-T-T-ATGACTCATGAGCTACCTCCAACTCTGAGCTATCTCTGGATC 347
Query 361 AACTAG---TGttttttttGGAGCCTG--ATAAGTTTGTAGATTAGATGGAAAATAAGCC 415
|| ||| | |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 348 AAGTAGTTTTTTTTTTTTTGGAGCCTGTTATAAGTTTGTAGATTAGATGGAAAATAAGCC 407
Query 416 AAGTGTCTTGACTGATAAATATGATGTTGGGAGGTTATTGGGTCAAGGTACTTTTGCCAA 475
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 408 AAGTGTTTTGACTGATAAATATGATGTTGGGAGGTTATTGGGTCAAGGTACTTTTGCCAA 467
Query 476 GGTGTATTATGGAAGGAGTATTCTTACTAACCAGAGTGTTGCTATCAAGATGATCGACAA 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 468 GGTGTATTATGGAAGGAGTATTCTTACTAACCAGAGTGTTGCTATCAAGATGATCGATAA 527
Query 536 GGAAAAGGTTATGAAAGTTGGTCTTATCGAACAGATCAAGAGAGAGATCTCTGTTATGAG 595
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 528 GGAAAAGGTTATGAAAGTTGGGCTTATCGAACAGATCAAGAGAGAGATCTCTGTTATGAG 587
Query 596 GATTGCTAGACACCCTAACGTTGTGGAGCTATATGAGGTCATGGCAACAAAAACAAGGAT 655
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 588 GATTGCTAGACACCCTAACGTTGTGGAGCTATATGAGGTCATGGCAACAAAAACGAGGAT 647
Query 656 CTACTTTGTTATGGAGTATTGTAAAGGTGGAGAGCTTTTCAACAAGGTTGCCAAAGGGAA 715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 648 CTACTTTGTTATGGAGTATTGTAAAGGTGGAGAGCTTTTCAACAAGGTTGCCAAAGGGAA 707
Query 716 ATTGAGAGATGATGTTGCTTGGAAATACTTTTATCAGCTTATCAACGCAGTTGATTTTTG 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 708 ATTGAGAGATGATGTTGCTTGGAAATACTTTTATCAGCTTATCAACGCAGTTGATTTTTG 767
Query 776 CCACAGCCGAGAGGTGTATCATCGTGACATTAAGCCAGAGAACCTATTGCTGGATGATAA 835
|||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||
Sbjct 768 CCACAGCCGAGAGGTGTATCATCGTGACATAAAGCCGGAGAACCTATTGCTAGATGATAA 827
Query 836 TGAGAATCTCAAGGTATCTGATTTCGGGTTAAGTGCCCTTGCTGACTGCAAGCGACAAGA 895
||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||
Sbjct 828 TGAGAATCTCAAGGTATCTGATTTCGGGTTAAGCGCCCTTGCTGACTGCAAGAGACAAGA 887
Query 896 TGGCCTCCTCCACACTACTTGTGGCACACCTGCATATGTTGCTCCCGAAGTGATCAATCG 955
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 888 TGGCCTCCTCCACACTACTTGTGGTACACCTGCATATGTTGCTCCAGAAGTGATCAATCG 947
Query 956 AAAAGGCTATGATGGCACTAAAGCAGATATTTGGTCTTGTGGGGTGGTTTTGTTTGTCCT 1015
|||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct 948 AAAAGGCTATGATGGCACAAAAGCAGATATTTGGTCTTGTGGTGTGGTTTTGTTTGTCCT 1007
Query 1016 ATTGGCAGGCTATCTACCTTTCCATGACTCAAATCTGATGGAGATGTACAGGAAGATAGG 1075
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1008 ATTGGCAGGCTATCTACCTTTCCATGACTCCAATCTGATGGAGATGTACAGGAAGATAGG 1067
Query 1076 GAAAGCAGATTTTAAGGCACCAAGCTGGTTTGCTCCAGAAGTACGGAGGCTGTTGTGTAA 1135
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1068 AAAAGCAGATTTTAAGGCACCAAGCTGGTTTGCTCCAGAAGTACGGAGGCTGTTGTGTAA 1127
Query 1136 GATGCTAGACCCTAACCCTGAAACTAGAATCACCATCGCAAGAATCAGGGAGAGTTCTTG 1195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1128 GATGCTAGACCCTAACCCTGAAACTAGAATCACCATCGCAAGAATCAGGGAGAGTTCTTG 1187
Query 1196 GTTCAGAAAAGGTTTACATATGAAGCAGAAAAAGATGGAGAAACGAGTCAAAGAGATGAA 1255
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 1188 GTTCAGAAAAGGTTTACATATGAAACAGAAAAAGATGGAGAAACGAGTCAAAGAGATAAA 1247
Query 1256 TTCTGTGGAAGCTGG---T----GT-C------G--CAG-GC-GGTCCAAATGAGAACGG 1297
|||||||||||||| | || | | | | || ||||||| |||||| ||
Sbjct 1248 CTCTGTGGAAGCTGGTACTGCAGGTACAAATGAGAACGGAGCAGGTCCAAGTGAGAATGG 1307
Query 1298 AGCAGGTCCAAGTGAGAACGGAGACAGGGTCACCGAGGAAAACCAAACAGACGAACCTAC 1357
||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 1308 AGCAGGTCCAAGTGAAAACGGAGACAGGGTCACGGAGGAAAACCATACAGACGAACCTAC 1367
Query 1358 AAATTTGAACGCTTTTGATTTAATTGCCTTGTCTGCTGGGTTTGATCTGGCAGGACTTTT 1417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1368 AAATTTGAACGCTTTTGATTTAATTGCCTTGTCTGCTGGGTTTGATCTGGCAGGACTGTT 1427
Query 1418 TGGAGATGTGTTTAACAAGCGAGAATCTAGATTCACATCCCAGAAACCTGCTTCAGTGAT 1477
|||||| || ||||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct 1428 TGGAGA--TG-ATAACAAGAGAGAATCTAGATTCACATCACAGAAACCTGCTTCAGTGAT 1484
Query 1478 CATATCTAAGCTGGAGGAAGTAGCACAACGATTGAAACTGAGCATAAGAAAGCGGGAAGC 1537
||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct 1485 CATATCTAAGCTGGAGGAAGTAGCACAGCGATTGAAACTGAGCATAAGAAAGCGAGAAGC 1544
Query 1538 AGGTTTGTTCAAATTGGAACGATTAAAAGAAGGAAGAAAAGGGATTCTATCGATGGATGC 1597
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1545 AGGTTTGTTCAAATTGGAACGATTAAAAGAAGGAAGAAAAGGGATTCTGTCGATGGATGC 1604
Query 1598 AGAAATATTTCAAGTGACGCCAACCTTTCATCTAGTGGAAGTGAAGAAGTCTAACGGAGA 1657
||||||||||||||||||||||| ||||||| |||||||||||||||| || || |||||
Sbjct 1605 AGAAATATTTCAAGTGACGCCAAACTTTCATTTAGTGGAAGTGAAGAAATCAAATGGAGA 1664
Query 1658 TACTCTGGAGTATCAGAAATTAGTGGCAGAGGATCTTAGGCCTGCTCTGTCAGATATTGT 1717
|||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct 1665 TACTCTCGAGTATCAGAAATTAGTAGCAGAGGATCTTAGACCTGCTCTGTCAGATATTGT 1724
Query 1718 ATGGGTTTGGCAGGGCGAGAAAGATGAGCCTGCTTCACAGC-A-AG--AG---------- 1763
||||||||||||||| ||||||||||||| | ||||||||| | || ||
Sbjct 1725 ATGGGTTTGGCAGGGTGAGAAAGATGAGCTTACTTCACAGCAAGAGACAGAATACCAACA 1784
Query 1764 ---------AC-AGAACAACAAG---AGGAAGAACCATAGTAGTTTTGATATATGTTCTT 1810
|| ||||||||||| |||||||||||| | |||||||| || |||||||
Sbjct 1785 ACAACAACAACAAGAACAACAAGAACAGGAAGAACCATTGAAGTTTTGAAATTTGTTCTT 1844
Query 1811 GTCAAG-TTTT-GAATTTTGCTTAACACTGAATCACTGATGTGAAACGTATATGAGTTTC 1868
|||||| |||| |||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 1845 GTCAAGTTTTTGGAATTTTGCTTAACACTGAATCACTGATGTTAATCGTATATGAGTTTC 1904
Query 1869 TTACATTTTTCGTTTGTGaaaaaaaGGAATCC 1900
|||||||||| |||||| |||||||||||||
Sbjct 1905 TTACATTTTTAATTTGTGGAAAAAAGGAATCC 1936
> AT5G07070.1 | Symbols: CIPK2, SnRK3.2 | CBL-interacting protein
kinase 2 | chr5:2196434-2198114 REVERSE LENGTH=1681
Length=1681
Score = 826 bits (447), Expect = 0.0
Identities = 714/844 (85%), Gaps = 13/844 (2%)
Strand=Plus/Plus
Query 401 GATGGAAAATAAGCCAAGTGTCTTGACTGATAA-ATATGATGTTGGGAGGTTATTGGGTC 459
|||||| || || |||||||| || ||||| || |||||| |||||||||||||||||||
Sbjct 1 GATGGAGAACAAACCAAGTGTATTAACTGA-AAGATATGAAGTTGGGAGGTTATTGGGTC 59
Query 460 AAGGTACTTTTGCCAAGGTGTATTATGGAAGGAGTATTCTTACTAACCAGAGTGTTGCTA 519
||||||||||||| || ||||||| ||||||||||| || ||| ||| ||||||| ||||
Sbjct 60 AAGGTACTTTTGCTAAAGTGTATTTTGGAAGGAGTAATCATACCAACGAGAGTGTAGCTA 119
Query 520 TCAAGATGATCGACAAGGA-AAAGGTTATGAAAGTTGGTCTTATCGAACAGATCAAGAGA 578
|||||||||| |||||||| |||| |||||| ||| || |||| | | || |||||| ||
Sbjct 120 TCAAGATGATTGACAAGGACAAAG-TTATGAGAGTCGGGCTTAGCCAGCAAATCAAGCGA 178
Query 579 GAGATCTCTGTTATGAGGATTGCTAGACACCCTAACGTTGTGGAGCTATATGAGGTCATG 638
||||||||||| |||||||| |||| |||||| || || || ||| |||| ||||| |||
Sbjct 179 GAGATCTCTGTAATGAGGATCGCTAAACACCCGAATGTCGTTGAGTTATACGAGGTTATG 238
Query 639 GCAACAAAAACAAGGATCTACTTTGTTATGGAGTATTGTAAAGGTGGAGAGCTTTTCAAC 698
|| ||||| ||||||| ||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 239 GCTACAAAGTCAAGGATTTACTTTGTTATTGAGTATTGTAAAGGTGGTGAGCTTTTCAAC 298
Query 699 AAGGTTGCCAAAGGGAAA-TTGAGAGATGATGTTGCTTGGAAATACTTTTATCAGCTTAT 757
|||||||| ||||| ||| || | ||| |||||||||||||| || ||||||||||||||
Sbjct 299 AAGGTTGCAAAAGGAAAACTTAA-AGAAGATGTTGCTTGGAAGTATTTTTATCAGCTTAT 357
Query 758 CAACGCAGTTGATTTTTGCCACAGCCGAG-AGGTGTATCATCGTGACATTAAGCCAGAGA 816
| || ||||||||||| |||||||| | || | ||||| || ||||||||||| || |
Sbjct 358 TAGTGCGGTTGATTTTTGTCACAGCCGCGGAGTT-TATCACCGCGACATTAAGCCGGAAA 416
Query 817 ACCTATTGCTGGATGATAATGAGAATCTCAAGGTATCTGATTTCGGGTTAAGTGCCCTTG 876
| || ||| ||||||| ||||| ||||| |||||||||||||| || |||||||| ||||
Sbjct 417 ATCTTTTGTTGGATGACAATGATAATCTTAAGGTATCTGATTTTGGTTTAAGTGCGCTTG 476
Query 877 CTGACTGCAAGCGACAAGATGGCCTCCTCCACACTACTTGTGGCACACCTGCATATGTTG 936
|||| |||||||| |||||||| || || || || |||||||| |||||||| |||||||
Sbjct 477 CTGATTGCAAGCGGCAAGATGGTCTTCTACATACAACTTGTGGTACACCTGCTTATGTTG 536
Query 937 CTCCCGAAGTGATCAATCGAAAAGGCTATGATGGCACTAAAGCAGATATTTGGTCTTGTG 996
| ||||| || || || |||||||| || || || || ||||| ||||||||||||||||
Sbjct 537 CGCCCGAGGTTATTAACCGAAAAGGATACGAGGGTACGAAAGCGGATATTTGGTCTTGTG 596
Query 997 GGGTGGTTTTGTTTGTCCTATTGGCAGGCTATCTACCTTTCCATGACTCAAATCTGATGG 1056
| || ||||||||||| || ||||| || ||||| |||||||||||| | ||||| ||||
Sbjct 597 GTGTTGTTTTGTTTGTTCTTTTGGCTGGTTATCTTCCTTTCCATGACACTAATCTTATGG 656
Query 1057 AGATGTACAGGAAGATAGGGAAAGCAGATTTTAAG-G-CACCAAGCTGGTTTGCTCCAGA 1114
||||||| ||||||||||| |||||||| || ||| | | ||| ||||||||||||| ||
Sbjct 657 AGATGTATAGGAAGATAGGTAAAGCAGACTTCAAGTGTC-CCA-GCTGGTTTGCTCCTGA 714
Query 1115 AGTACGGAGGCTGTTGTGTAAGATGCTAGACCCTAACCCTGAAACTAGAATCACCATCGC 1174
||| ||| || |||||||||||| | |||||||||| ||| ||||||||||| || ||
Sbjct 715 GGTAAAGAGACTATTGTGTAAGATGTTGGACCCTAACCATGAGACTAGAATCACTATTGC 774
Query 1175 AAGAATCAGGGAGAGTTCTTGGTTCAGAAAAGGTTTACATATGAAGCAGAAAAAGATGGA 1234
|| ||||| ||||||||||||||||||||| ||||| ||| ||||||| |||||||||||
Sbjct 775 AAAAATCAAGGAGAGTTCTTGGTTCAGAAAGGGTTTGCATTTGAAGCAAAAAAAGATGGA 834
Query 1235 GAAA 1238
|||
Sbjct 835 -AAA 837
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 94075821330
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5