BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg495963
Length=2583
Score E
Sequences producing significant alignments: (Bits) Value
AT5G58460.1 | Symbols: ATCHX25, CHX25 | cation/H+ exchanger 25 ... 3892 0.0
AT5G37060.1 | Symbols: ATCHX24, CHX24 | cation/H+ exchanger 24 ... 2484 0.0
> AT5G58460.1 | Symbols: ATCHX25, CHX25 | cation/H+ exchanger 25
| chr5:23632361-23635037 REVERSE LENGTH=2574
Length=2574
Score = 3892 bits (2107), Expect = 0.0
Identities = 2436/2593 (94%), Gaps = 29/2593 (1%)
Strand=Plus/Plus
Query 1 ATGGTTAGGTATTTCCCAAGTGATGACTGGAGTGCCCTGCCTACCCGTTTCGGGTTCTGG 60
|||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct 1 ATGGTTAGGTCTTTCCCAAGTGATGGCTGGAGTGCCCTGCCTACCCGTTTTGGGTTCTGG 60
Query 61 CCGGGGAATCCAACCACCACCGGAGTGGTCAGCAGCCGTGTTTTCTCTGCTAGACTTCCG 120
|| | ||||||||||||| |||||||||||||||| ||||||||||| || |||||||||
Sbjct 61 CCAGAGAATCCAACCACCGCCGGAGTGGTCAGCAGTCGTGTTTTCTCAGCCAGACTTCCG 120
Query 121 GTGGTTTGTCGACAGATTCACGATAAGCAGCCGTTCGGAATGTTCAAAGGCGAAAATGGC 180
| |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 GAGGTTTGCCGACAGGTTCACGATAAGCAGCCGTTCGGAATGTTCAAAGGCGAAAATGGC 180
Query 181 ATGAACTACACATTTTCAACATTTTTGATCGAAGCAATACTCATCATTTTGTTCATCAAA 240
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 181 ATGAACTACACATTTTCAACCTTTTTGATCGAAGCAATACTCATCATTTTCTTCATCAAA 240
Query 241 ATTGTTTACTTCCTCCTTCGACCTCTTCGTCAACCTCGTATAGTCTGCGAGATCATTGGT 300
||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 241 ATTGTTTACGTCCTCCTTCGACCTCTTCGCCAACCTCGTATAGTCTGCGAGATCATTGGT 300
Query 301 GGGATGATGATAGGACCGTCCATGCTT-GGAAGAAGCCGAAACTTCAATTACTATCTGTT 359
|||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||
Sbjct 301 GGGATGATGATAGGACCGTCCATG-TTAGGAAGAAACCGAAACTTCAATTACTATCTGTT 359
Query 360 TCCTCCAATTGCGAATTACATATGCGCGAACATAGGACTGTTGGGATTCTTTTATTTCTT 419
||| || |||||||||||||||||||| |||||||||||| ||||||||||||| |||||
Sbjct 360 TCCACCGATTGCGAATTACATATGCGCAAACATAGGACTGATGGGATTCTTTTACTTCTT 419
Query 420 CTTCCTCACGGCTGCCAAGACGGACGTTGCAGAAATCTTTAAAGCACCAAGAAAGCATAA 479
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct 420 CTTCCTCACGGCTGCCAAAACAGACGTTGCAGAAATCTTTAAAGCACCAAGAAAGCATAA 479
Query 480 GTACATTGCTGCCA-TTAGCGTTTTGGTGCCGATTGCTTGCGTGGGGGGCACGGGGGCTG 538
||||||||||| || |||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct 480 GTACATTGCTG-CAGTTAGCGTTTTGGTGCCGATTGCTTGCGTGGGGAGCACGGGAGCTG 538
Query 539 CCTTGAAAGAAAAAATGGATGTAAGATTGCAGAAATCTTCTTCCATTGGAGGGGTCACGT 598
|| | ||| | ||||||||| |||||||||||||| |||| |||||||||||||||||||
Sbjct 539 CCCTAAAACACAAAATGGATATAAGATTGCAGAAACCTTCGTCCATTGGAGGGGTCACGT 598
Query 599 TCGCCTTGGGTTTCACTTCTTTTCCAGTCATTTACACTGTTTTGAGAGACATGAACCTTC 658
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 599 TCGCCTTGGGTTTCACTTCTTTTCCGGTCATTTACACTGTTTTGAGAGACATGAACCTTC 658
Query 659 TCAACTCCGAGATAGGAAAGTTCGCCATGTCAGTGACTCTCCTCGGAGACATGGTAGGGA 718
||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct 659 TCAACTCTGAGATAGGAAAGTTCGCCATGTCAGTGACTCTCCTTGGAGACATGGTTGGGG 718
Query 719 TCTACGTGCTTGTTTTGTTTGAAGCCATGGCGCAGGCTGACGGTGGAGGAGGAGCATACT 778
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 719 TCTACGTGCTTGTTTTGTTTGAAGCCATGGCGCAGGCTGACGGAGGAGGAGGAGCATACT 778
Query 779 CTGTCATATGGTTTCTCATCTCATCGGCTATCTTGGCCGCTTTTTTGCTTTTGGTTGTGA 838
||||||||||||||||||| || |||||||| ||||||||| |||||||||||||||||
Sbjct 779 CTGTCATATGGTTTCTCATATCGGCGGCTATCATGGCCGCTTGTTTGCTTTTGGTTGTGA 838
Query 839 AACGAAGCTTTGAGA-GGATTGTCGCCAAAACGCCTGAGGGAGGACTCGTGAACCAAAAC 897
||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 839 AACGATCCTTTGA-ATGGATTGTCGCCAAAACGCCTGAGGGAGGACTCGTGAACCAAAAC 897
Query 898 TACATTGTC-ATGATTCTCATGGGTGTCCTTGTCTCTTGTTTCCTCACCGACATGTTTGG 956
||||| ||| || ||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct 898 TACATCGTCAAT-ATTCTCATGGGTGTCCTTGTCTCTTGTTTCCTCACTGACATGTTCGG 956
Query 957 TATGGCTATAGCCGTTGGACCCATTTGGCTAGGGTTGGTGGTCCCTCATGGCCCACCGTT 1016
|||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 957 TATGGCTATAGCTGTTGGACCCATTTGGCTGGGGTTGGTGGTCCCTCATGGACCACCGTT 1016
Query 1017 GGGTTCCACGTTGGCTATTCGGAGCGAGACCTTCGTTAATGAATTCTTGATGCCTTTCTC 1076
||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct 1017 AGGTTCGACGTTGGCTATTAGGAGCGAGACCTTTGTTAATGAATTCTTGATGCCTTTCTC 1076
Query 1077 TTTTGCTTTAGTGGGACAAAAAACCAATGTCAACTTACTTAGCAATGAGACTTGGCCTAA 1136
||||||||| ||||||||||||||||||||||||||| ||||||| ||||| ||||| ||
Sbjct 1077 TTTTGCTTTGGTGGGACAAAAAACCAATGTCAACTTAATTAGCAAAGAGACGTGGCCCAA 1136
Query 1137 ACAGGTCTCTCCTCTTGTCTACATGAGCATCGTTGGCTTCGTCACCAAGTTTGTCTCCTC 1196
|||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1137 ACAGATCTCTCCTCTTATCTACATGAGCATCGTTGGCTTCGTCACCAAGTTTGTCTCTTC 1196
Query 1197 CACTGGCGCTGCTCTCTTCTTTAAAGTCCCCACTAGGGACAGTCTCACGCTTGGCTTGAT 1256
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1197 CACTGGCGCTGCTCTCTTCTTTAAAGTCCCCACTAGGGACAGTCTCACGCTTGGCCTGAT 1256
Query 1257 GATGAACCTGAGAGGCCAGATCGATATCTTGCTCTACTTGCATTGGATCGACAAACGTAT 1316
||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct 1257 GATGAACTTGAGAGGCCAGATCGATATCTTACTCTACTTGCATTGGATCGACAAACAAAT 1316
Query 1317 GGTAGGCTTACCCGGTTATACTGTCATGGTTTTGTATGCCATTC-TGGTCACGGGTGTAA 1375
||||||||||||||||||| ||||||||||||||||||| | || |||||||||||||||
Sbjct 1317 GGTAGGCTTACCCGGTTATTCTGTCATGGTTTTGTATGCGA-TCGTGGTCACGGGTGTAA 1375
Query 1376 CAGCGCCGCTCATCAGTTTCCTCTACGATCCCACTCGGCCTTACAGAAGCAGCAAGCGCC 1435
|||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1376 CAGCGCCGCTAATCAGCTTCCTCTACGATCCCACTCGGCCTTATAGAAGCAGCAAGCGCC 1435
Query 1436 GCACAATCCAGCACACTCCTCAGAACACCGAGATGGGACTAGTTCTTGCAGTCTCCGACC 1495
|||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct 1436 GCACAATCCAACACACTCCTCAGAACACCGAGACGGGACTAGTTCTTGCAGTAACCGACC 1495
Query 1496 ATGATACCTTCTCTGGCTTGATCACCTTTCTCGACTTCGCCTATCCCACTAAAACTAGTC 1555
||||||||||||| ||||||||||| ||||| |||||||| |||||||||||||||||||
Sbjct 1496 ATGATACCTTCTCAGGCTTGATCACGTTTCTAGACTTCGCTTATCCCACTAAAACTAGTC 1555
Query 1556 CTTTTTCTATATTCGCAATCCAGCTTGTGGAACTGGAAGGGCGTGCCCAACCGTTGTTTA 1615
|||| ||| |||||||||| ||||| |||||||||||||||||||||||||| |||||||
Sbjct 1556 CTTTCTCTGTATTCGCAATTCAGCTAGTGGAACTGGAAGGGCGTGCCCAACCCTTGTTTA 1615
Query 1616 TTGAACACGACAAGCGAAAGAAGGAGGATGAAGAATACGAGGAGGAAGAGGAAGAGCC-G 1674
||| ||||||||| | || || | ||| ||||||||| ||||||||||||||||| |
Sbjct 1616 TTGCACACGACAA--G-AA-AA-G-GGAGGAAGAATAC---GAGGAAGAGGAAGAGCCTG 1666
Query 1675 --GAGCGTATGCGGAGGAGCAGGCGAGTAGACCAGGTGCAGAGCGCCTTTAAACTGTACC 1732
|||||||| || ||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct 1667 CAGAGCGTAT--GG-GGAGCAGGCGAGTAGACCAAGTGCAGAGCGCATTTAAACTGTACC 1723
Query 1733 AAGAGAAAAGAAGTGAGTGTGTGAAGATGCATGCCTACACCGCCA-ATGCTTCAAAGCAT 1791
|||||||||||||||||||||||| ||||||||||||||| | || ||||||||||||||
Sbjct 1724 AAGAGAAAAGAAGTGAGTGTGTGACGATGCATGCCTACACTG-CACATGCTTCAAAGCAT 1782
Query 1792 CACATGTATCAAGATATTTGTGGGGTGGCCTTGACCAAGAAAACCGCTTTCATTCTCTTA 1851
||||||||||| ||||||| | | |||| ||||||||||||||||||||||||||||||
Sbjct 1783 AACATGTATCAAAATATTTGCGAGCTGGCTTTGACCAAGAAAACCGCTTTCATTCTCTTA 1842
Query 1852 CCTTATCAGAAAGAGCGTCTTCAAGACGCAGCTCTTACCGAGCTACGTGACTCCGGCATG 1911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1843 CCTTATCAGAAAGAGCGTCTTCAAGACGCAGCTCTTACCGAGCTACGTGACTCCGGCATG 1902
Query 1912 CTATCTGTGAACGCAGACGTCTTGGCACACACACCTTGCTCTGTCTGTATCTATTATGAG 1971
||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||
Sbjct 1903 CTATCTGTGAACGCAGACGTCTTGGCACACACACCATGTTCTGTCTGTATCTATTACGAG 1962
Query 1972 AAGGGACGACTTAAAAACGCCATGGTTCGGTCATCCATGGACCCGCAACACACAACAAAT 2031
|||||||||||||| ||||| |||||| |||||||||||||||| |||||||||||||||
Sbjct 1963 AAGGGACGACTTAAGAACGCTATGGTTAGGTCATCCATGGACCCACAACACACAACAAAT 2022
Query 2032 TCAAGCCATATGAGGCAAGAAATGTACCGTTTCGTGGTTCTGTTTTTAGGAGGAGCTGAT 2091
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2023 TCTAGCCATATGAGGCAAGAAATGTACCGTTTCGTGGTTCTGTTTTTAGGAGGAGCTGAT 2082
Query 2092 AACAGAGAAGCTCTGCATCTGGCTGATAGGATGACGGAGAACCCGTAT-ATAACCTTGAC 2150
||||||||||||||||||||||||||||||||||||||||| |||| | |||| ||||||
Sbjct 2083 AACAGAGAAGCTCTGCATCTGGCTGATAGGATGACGGAGAATCCGT-TCATAAACTTGAC 2141
Query 2151 AGTTATTAGGTTCTTGGCGCACAACCACGAAGGAGAGGATGAGAGGGAGAAGAAGCTAGA 2210
||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct 2142 AGTGATTAGGTTCTTGGCGCACAACCACGAAGGAGAGGACGAGAGGGAGAAGAAGCTGGA 2201
Query 2211 CGATGGGGTGGTGACGTGGTTCTGGGTCAAGAACGAAAGCAACGAAAGGGTTAGTTACAA 2270
|||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 2202 CGATGGGGTGGTGACGTGGTTCTGGGTCAAGAACGAAAGCAACGCTAGGGTTAGCTACAA 2261
Query 2271 GGAGGTTGTTGTCAAGAACGGTGCTGAGACATTGGCTGCGATTCAAGCAATGAATGTTAA 2330
|||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct 2262 GGAGGTTGTTGTGAAGAACGGTGCTGAGACGTTGGCTGCGATTCAAGCAATGAATGTCAA 2321
Query 2331 TGACTACGATCTGTGGATAACCGGGAGGAGAGAAGGGATCAACCCAAAGATTCAGGAAGG 2390
|||||| ||| ||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct 2322 TGACTATGATTTGTGGATAACCGGGAGGAGAGAAGGGATCAATCCAAAGATTCTGGAAGG 2381
Query 2391 ACTTTCTACGTGGAGCGAGGACCACCAGCTTGGAGTCATCGGAGACACAGTGGCTGGGAG 2450
|||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||
Sbjct 2382 ACTTTCTACGTGGAGCGAAGACCACCAGCTTGGAGTCATTGGAGACACCGTGGCTGGGAG 2441
Query 2451 CGTTTTCGCCTCGGATGGTTCGGTGTTGGTGGTGCAGCAACAAGTGAGGAACCAGAAGGG 2510
||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||
Sbjct 2442 CGTTTTCGCCTCGGAGGGTTCGGTGTTGGTGGTGCAGCAACAAGTGAGAAACCAGATGGG 2501
Query 2511 TGGTGATGGTTTCTTGAACGGCAAGTTTGATTACAAGAAATTAGTGTCTCCTTGGTCTCA 2570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2502 TGGTGATGGTTTCTTGAACGGCAAGTTTGATTACAAGAAATTAGTGTCTCCTTGGTCTCA 2561
Query 2571 CTCTCATAATTGA 2583
|||||||||||||
Sbjct 2562 CTCTCATAATTGA 2574
> AT5G37060.1 | Symbols: ATCHX24, CHX24 | cation/H+ exchanger 24
| chr5:14642741-14645414 REVERSE LENGTH=2580
Length=2580
Score = 2484 bits (1345), Expect = 0.0
Identities = 2210/2622 (84%), Gaps = 81/2622 (3%)
Strand=Plus/Plus
Query 1 ATGGTTAGGTATTTCCCAAGT-GATGACTGGAGTGC-CCTGCCTACCCGTTTCGGGTTCT 58
||||||||| | ||||| | | ||||| |||| | ||||||| ||| ||| |||||||
Sbjct 1 ATGGTTAGGCACTTCCCCA-TCAATGACCAGAGT-CTCCTGCCTGCCCATTTTGGGTTCT 58
Query 59 GGCCGGGGAATC-CAACCACCA-CCGGAGTGGTCAGCAGCCGTGTTTTCTCTGCTAGACT 116
||||||| || | |||||| || |||||| |||||||| |||||||||||| | | | |
Sbjct 59 GGCCGGGTAA-CTCAACCA-CACCCGGAGAGGTCAGCAATCGTGTTTTCTCTCCCAAAAT 116
Query 117 TCCGGTGGTTTGTC-GACAGA-TTCACGA-TAAGCAGCCGTTCGGAATGTTCAAAGGCGA 173
|||||||||||| | || | | |||| | |||||||||||| |||||||||||||||||
Sbjct 117 TCCGGTGGTTTGCCGGA-A-ACTTCA-TAGTAAGCAGCCGTTTGGAATGTTCAAAGGCGA 173
Query 174 AAATGGC-ATGAACTACACATTTTCAACATTTTTGATCGAAGCAATAC-TCATCATTTTG 231
|||| || ||||||||| ||||||| || ||||||||||||||||| | ||||||||||
Sbjct 174 AAAT-GCTATGAACTACGCATTTTCGACCTTTTTGATCGAAGCAAT-CATCATCATTTTC 231
Query 232 TTCATCAAAATTGTTTA-C-TTCCTCCTTCGACCTCTTCGTCAACCTCGTATAGTCTGCG 289
||||||||| ||| ||| | || | |||||||||| |||| ||||||||||||||| | |
Sbjct 232 TTCATCAAAGTTG-TTAGCATTGC-CCTTCGACCTTTTCGCCAACCTCGTATAGTCAGTG 289
Query 290 AGATCATTGGTGGGATGATGATAGGACCGTCCATGCTTGGAAGAAGCCGAAACTTCAATT 349
||||||||||||| |||||||||||||| || ||| ||||| ||| | |||| |||||||
Sbjct 290 AGATCATTGGTGGAATGATGATAGGACCATCGATGTTTGGAGGAATCAGAAATTTCAATT 349
Query 350 ACTATCTGTTTCCTCCAATTGCGAATTACATATGCGCGAACATAGGACTGTTGGGATTCT 409
||||| | || || ||||||||||||||||||||||| |||||||||||| |||| || |
Sbjct 350 ACTATTTATTCCCACCAATTGCGAATTACATATGCGCAAACATAGGACTGATGGGGTTTT 409
Query 410 TTTATTTCTTCTTCCTCACGGCTGCCAAGACGGACGTTGCAGAAATCT-TTAAAGCACCA 468
|||| ||| ||||||||||||| |||||||||||||||| || || | || ||||||
Sbjct 410 TTTACTTCCTCTTCCTCACGGCGGCCAAGACGGACGTTGGAGCCAT-TGGGAAGGCACCA 468
Query 469 AGAAAGCATAAGTACATTGCTGCCATTA-GCGTTTTGGTGCCGATTGCT-TGCGTGGGGG 526
|||||||| |||||||||||||||| || | ||| | ||||||| | | ||||| ||
Sbjct 469 AGAAAGCACAAGTACATTGCTGCCA-TAGGAGTTATCGTGCCGA-TAATCTGCGTTGGAA 526
Query 527 GCACG-GGGGCT-GCCTTGAAAGAAAAAATGGATGTAAGA-TTGCAGAAATCTTCTTCCA 583
| || |||| | ||| || ||| ||||||||| || | |||||||| |||| ||||
Sbjct 527 G--CGTGGGGATGGCCATGCGAGACCAAATGGATG-AAAACTTGCAGAAGCCTTCGTCCA 583
Query 584 TTGGAGGGGTCACGTTCGCCTTGGGTTTCACTTCTTTTCCAGTCATTTACACTGTTTTGA 643
||||||| ||| |||||||||| |||||||||||| || ||||||||||| |||||||
Sbjct 584 TTGGAGGAGTCGTGTTCGCCTTGTCTTTCACTTCTTTCCCGGTCATTTACACCGTTTTGA 643
Query 644 GAGACATGAACCTTCTCAACTCCGAGATAGGAAAGTTCGCCATGTCAGTGACTCTCCTCG 703
|||||||||||||||||||||||||| | || |||||||||||||| ||| ||||||| |
Sbjct 644 GAGACATGAACCTTCTCAACTCCGAGGTGGGCAAGTTCGCCATGTCGGTGGCTCTCCTTG 703
Query 704 GAGACATGGTAGGGATCTACGTGCTTGTT-TTGTTTGAAGCCATGGCGCAGGCTGACGGT 762
||||||||| |||| |||||||| ||||| || |||||||||||| |||| |||||| ||
Sbjct 704 GAGACATGGCAGGGGTCTACGTGATTGTTATT-TTTGAAGCCATGACGCATGCTGAC-GT 761
Query 763 GGAGGAGGAGCATACTCTGTCATATGGTTTCTCATCTCATC-G-GCT-ATCTTGGCCGCT 819
||||||||| || |||||| | |||||||| | | ||| | | | ||||| || |||
Sbjct 762 --AGGAGGAGCTTATTCTGTCTTCTGGTTTCT-A-GT-ATCGGTGGTCATCTTCGCAGCT 816
Query 820 TTTTTGCTTTTGGTTGTGAAACGAAG-CTTTGAGAGGATTGTCGCCAAAACGCCTGAGGG 878
||| ||||| ||||||| | ||| || |||||| |||| ||| || |||||||||| ||
Sbjct 817 TTTATGCTTCTGGTTGTTAGACG-AGCCTTTGATTGGATAGTCTCCCAAACGCCTGAAGG 875
Query 879 AGGACTCGTGAACCAAAACTACATTGTCATGATTCTCATGGGTGTCCTTGTCTCTTGTTT 938
| ||| ||||||||||||||||| |||||||||||||||||||| |||| |||||||||
Sbjct 876 AACACTTGTGAACCAAAACTACATCGTCATGATTCTCATGGGTGTTCTTGCCTCTTGTTT 935
Query 939 CCTCACCGACATGTTTGGTATGGCTATAGCCGTTGGACCCATTTGGCTAGGGTTGGTGGT 998
|||||| |||||||| ||| | |||||||||| |||||||||||||||||||| | ||
Sbjct 936 CCTCACAGACATGTTCGGTCTTTCTATAGCCGTGGGACCCATTTGGCTAGGGTTACTAGT 995
Query 999 CCCTCATGGCCCACCGTTGGGTTCCACGTTGGCTATTCGGAGCGAGACCTTCGT-TAATG 1057
|||||||||||||||||||||||| ||||||||| | || |||||||||||| | | |||
Sbjct 996 CCCTCATGGCCCACCGTTGGGTTCGACGTTGGCTGTCCGAAGCGAGACCTTCATCT-ATG 1054
Query 1058 AATTCTTGATGCCTTTCTCTTTTGCTTTAGTGGGACAAAAAACCAATGTCAACTTACTTA 1117
|||| |||||||||||| | | |||| ||||||||||| |||||| || |||| ||||
Sbjct 1055 AATTTTTGATGCCTTTCACATATGCTCTAGTGGGACAAGGCACCAATATCCACTTCCTTA 1114
Query 1118 GCA-ATGAGACTTGGC-CTAAACAGGTCTCTCCTCT-TGTCTACATGAGCATCGTTGGCT 1174
| | ||||||| |||| | || ||| | |||||||| | ||||||||| | |||| ||||
Sbjct 1115 G-AGATGAGACATGGCGC-AATCAGCTATCTCCTCTCT-TCTACATGACCGTCGTCGGCT 1171
Query 1175 TCGTCACCAAGTTTGTCTCCT-CCACTGGCGCTGCTCTCTTCTTTAAAGTCCCCACTAGG 1233
|| ||||||||||| ||| || || || ||||||||| ||||| ||||||||| |||||
Sbjct 1172 TCATCACCAAGTTTCTCT-CTACCGCTTTCGCTGCTCTATTCTTCAAAGTCCCCGCTAGG 1230
Query 1234 GACAGTCTCACGCTTGGCTTGATGATGAACCTGAGAGGCCAGATCGATATCTTGCTCTAC 1293
|| ||| | || ||||| |||||||||||| | ||||| ||||| ||| | ||| | |||
Sbjct 1231 GAAAGTATTACACTTGGTTTGATGATGAACTTAAGAGGTCAGATGGATTTGTTGGTATAC 1290
Query 1294 TTGCATTGGATCGACAAACGTATGGTAGGCTTACCCGGTTATACTGTCATGGTTTTGTAT 1353
|||||||||||||| |||||||| || ||||| |||||||| ||||||||||||||| ||
Sbjct 1291 TTGCATTGGATCGATAAACGTATTGTGGGCTTTCCCGGTTACACTGTCATGGTTTTGCAT 1350
Query 1354 GCCATTCTGGTCACGGGTGTAACAG-CGCCGCTCATC-AGTTTCCTCTACGATCCCACTC 1411
| || ||||||| | |||||| | | || |||||| | ||| |||||||||||||||
Sbjct 1351 ACGGTTGTGGTCACAGCTGTAAC-GACCCCACTCATCAACTTT-TTCTACGATCCCACTC 1408
Query 1412 GGCCTTACAGAAGCAGCAAGCGCCGCACAATCCAGCACACTCCTCAGAACACCGAGATGG 1471
| |||||| |||||||||||| |||||| ||||| |||||||||||||||||||||||||
Sbjct 1409 GACCTTACCGAAGCAGCAAGCACCGCACCATCCAACACACTCCTCAGAACACCGAGATGG 1468
Query 1472 GACTAGTTCTTGCAGTCTCCGACCATGATACCTTCTCTGGCTTGATCACCTTTCTCGACT 1531
|||| ||||||||||| |||||||| || ||||| || || ||||| || |||||||| |
Sbjct 1469 GACTGGTTCTTGCAGTTTCCGACCACGAAACCTTGTCGGGTTTGATAACTTTTCTCGATT 1528
Query 1532 TCGCCTATCCCACTAAAACTAGTCCTTTTTCTATATTCGCAATCCAGCTTGTGGAACTGG 1591
|||||||||||||||||| |||||| || |||||||||||| ||||||| |||||||| |
Sbjct 1529 TCGCCTATCCCACTAAAAGTAGTCCCTTATCTATATTCGCAGTCCAGCTAGTGGAACTAG 1588
Query 1592 AAGGGCGTGCCCA-ACCGTTGTTTATTGAACACG-ACAAGCGAAA-GA--AGGAGGATGA 1646
||| | | ||| |||||||||||||| |||| |||| ||||| || |||| || ||
Sbjct 1589 CAGGAAGAG-CCACGCCGTTGTTTATTGACCACGAACAA-CGAAAGGAGGAGGAAGAAGA 1646
Query 1647 AGAATACGAGGAGGAAGAGGAAGAGCCGGAGCGTATGCGGAGGAGCAGGCGAGTAGACCA 1706
||||||||||||||||||||||||||| || |||| || | | | | | || |||| ||
Sbjct 1647 AGAATACGAGGAGGAAGAGGAAGAGCCTGAACGTAAGC-AAAGTGGACG-GA-TAGATCA 1703
Query 1707 GGTGCAGAGCGCCTTTAAACTGTACCAAGAGAAAAGAAGTGAGTGTGTGAAGATGCATGC 1766
|||||| ||||||||||| ||||| |||||||||||| |||||| |||| | ||| | |
Sbjct 1704 GGTGCAAAGCGCCTTTAAGTTGTACGAAGAGAAAAGAAATGAGTGCGTGACGTTGCGTTC 1763
Query 1767 CTACACCGC-CAATGCTTCAAAGCATCACATGTATCAAGATATTTGTGGGGTGGCCTTGA 1825
||||| || | ||||| |||| | || |||||| ||||| ||||| | | | ||||| |
Sbjct 1764 ATACACAGCTC-ATGCTCCAAAACGTCTCATGTACCAAGACATTTGCGAGCTTGCCTT-A 1821
Query 1826 -CCAAGAAAACCGCTTTCATTCTCTTACCTTATCAGAAAGAGCGTCTTCAAGACGCAGCT 1884
|||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct 1822 GGCAAGAAAACCGCTTTCATTCTCTTACCTTATCAGAAAGAGCGTCTTGAAGACGCTGCC 1881
Query 1885 CTTACCGAGCTACGTGACTCCGGCATGCTATCTGTGAACGCAGACGTCTTGGCACACACA 1944
| ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||
Sbjct 1882 CCTACCGAGCTACGTGATTCCGGCATGCTATCTGTGAACGCAGACGTCTTGGAACACACA 1941
Query 1945 CCTTGCTCTGTCTGTATCTATTATGAGAAGGGACGACTTAAAAACGCCATGGTTCGGTCA 2004
||||||||||||||||| |||| ||| |||||||| ||||| ||||| ||||| ||| |
Sbjct 1942 CCTTGCTCTGTCTGTATATATTTTGACAAGGGACGGCTTAAGAACGCGGTGGTTAGGTTA 2001
Query 2005 TCCATGGACCCGCAACACACAACAAATTCAAGCCATATGAGGCAAGAAATGTACCGTTTC 2064
|||||||||| |||||| ||||||| |||| || |||||||||||||| ||||||||||
Sbjct 2002 TCCATGGACCTACAACACTCAACAAACTCAATCCGTATGAGGCAAGAAACGTACCGTTTC 2061
Query 2065 GTGGTTCTGTTTTTAGGAGGAGCTGATAACAGAGAAGCTCTGCATCTGGCTGATAGGATG 2124
|||||| |||||||||||||||||||||||||||||||||| ||||| || ||||| |||
Sbjct 2062 GTGGTTTTGTTTTTAGGAGGAGCTGATAACAGAGAAGCTCTACATCTAGCCGATAGAATG 2121
Query 2125 ACGGAGAA-CCCGTATATAACCTTGACAGTTATTAGGTTCTTGGCGCACAACCACGAAGG 2183
| | || |||| | |||| ||||| || || | ||||| || |||||||||||||
Sbjct 2122 TCA-ACAAACCCGGACGTAACGTTGACTGTGATCCGATTCTTATCGTACAACCACGAAGG 2180
Query 2184 AGAGGATGAGAGGGAGAAGAAGCTAGACGATGGGGTGGTGACGTGGTTCTGGGTCAAGAA 2243
||| || ||||| |||||||||||||||||||| || || || ||||| |||||||| ||
Sbjct 2181 AGAAGACGAGAGAGAGAAGAAGCTAGACGATGGTGTAGTCACATGGTTTTGGGTCAAAAA 2240
Query 2244 CGAAAGCAACGAAAGGGTTAGTTACAAGGAGGTTGTTGTCAAGAACGGTGCTGAGACATT 2303
|||||||||||| |||||||||||||| || ||||| ||||||||||||||||||||| |
Sbjct 2241 CGAAAGCAACGAGAGGGTTAGTTACAAAGAAGTTGTAGTCAAGAACGGTGCTGAGACACT 2300
Query 2304 GGCTGCGATTCAAGCAATGAATGTTAATGACTACGATCTGTGGATAACCGGGAGGAGAGA 2363
||||| || |||||||||||||| || ||||||||||| ||||||||||| || |||||
Sbjct 2301 CGCTGCAATCCAAGCAATGAATGTCAACGACTACGATCTCTGGATAACCGGAAGAAGAGA 2360
Query 2364 AGGGATCAACCCAAAGATTCAGGAAGGACTT-TCTACGTGGAGCGAGGACCACCAGCTTG 2422
|||||||||||||||||||| ||||| || || ||||||||||| ||||||||||| |
Sbjct 2361 AGGGATCAACCCAAAGATTCTTGAAGGT-TTATCCACGTGGAGCGAAGACCACCAGCTCG 2419
Query 2423 GAGTCATCGGAGACACAGTGGCTGGGAGCGT-TTTCGCCTCGGATGGTTCGGTGTTGGTG 2481
||||||| |||||||| ||||||| |||||| ||| ||||| || || ||||||||||||
Sbjct 2420 GAGTCATTGGAGACACCGTGGCTGCGAGCGTCTTT-GCCTCAGAAGGGTCGGTGTTGGTG 2478
Query 2482 GTGCAGCAACAAGTGAGGAACCAGAAGGGTGGTGATGGTTTCTTGAACGGCAAGTTTGAT 2541
||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||
Sbjct 2479 GTGCAGCAACAAGTGAGGAACCAAAAAGGTGGTGATGGTTTCTTGAATGGCAAGTTTGAT 2538
Query 2542 TACAAGAAATTAGTGTCTCCTTGGTCTCACTCTCATAATTGA 2583
||||||| || | |||||||||||||||||||||||||||
Sbjct 2539 TACAAGAGGTTCTTATCTCCTTGGTCTCACTCTCATAATTGA 2580
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 128226706308
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5