BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg495968
Length=998
Score E
Sequences producing significant alignments: (Bits) Value
AT5G58490.1 | Symbols: | NAD(P)-binding Rossmann-fold superfam... 1456 0.0
> AT5G58490.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr5:23643018-23644598 FORWARD LENGTH=1168
Length=1168
Score = 1456 bits (788), Expect = 0.0
Identities = 903/960 (94%), Gaps = 2/960 (0%)
Strand=Plus/Plus
Query 14 GAGAAGTAGTCTGTGTCACCGGCGCCAGTGGCTGCATCGGCTCGTGGCTGGTCCATCTGC 73
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 67 GAGAAGTAGTCTGTGTCACCGGCGCCAGTGGCTGCATCGGCTCGTGGCTGGTCCATCAGC 126
Query 74 TCCTCCACCGCGGCTACTCCGTCCACGCCACCGTGAAAAACCTCCAGGATGAGAAAGAAA 133
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 127 TCCTCCTCCGCGGCTACTCCGTCCACGCCACCGTGAAAAACCTCCAGGATGAGAAAGAGA 186
Query 134 CGAAACATCTAGAAGCTCTTGAAGGTGCCGCCACACGCCTCCATCTTTTCGAGATGGATC 193
||||||||||||||| ||| |||||||| ||||||||||||||||| |||||||||||||
Sbjct 187 CGAAACATCTAGAAGGTCTCGAAGGTGCAGCCACACGCCTCCATCTATTCGAGATGGATC 246
Query 194 TCCTACAATACGACACCGTTTCCGCCGCCGTCAATGGATGCTCCGGCGTATTCCACCTCG 253
||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct 247 TCCTACAATACGACACCGTTTCCGCCGCCATCAATGGTTGCTCCGGCGTATTCCACCTCG 306
Query 254 CATCGCCCTGTATCGTCGATGAAGTCCAAGATCCCCAGAAGCAACTACTTGACCCTGCGG 313
|||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 307 CATCACCTTGTATCGTCGATGAAGTCCAAGATCCCCAGAAGCAACTACTTGACCCGGCGG 366
Query 314 TTAAAGGGACCATAAATGTACTGACTGCGGCGAAAGAAGCCGGTGTTAAGAGGGTTGTTG 373
||||||| ||||||||||| ||||| ||||| ||||||||| |||||||||| |||||||
Sbjct 367 TTAAAGGAACCATAAATGTTCTGACGGCGGCAAAAGAAGCCAGTGTTAAGAGAGTTGTTG 426
Query 374 TGACGTCTTCGATATCTGCCATAACTCCAAGTCCCAACTGGCCTGCCGATAAGATCAAGA 433
|||||||||||||||| || || ||||||||||||||||||||||| |||||||||||||
Sbjct 427 TGACGTCTTCGATATCGGCGATTACTCCAAGTCCCAACTGGCCTGCTGATAAGATCAAGA 486
Query 434 ATGAGGAATGTTGGGCTGATCAAGACTACTGCAAGCAAAATGGATTATGGTATCCACTGT 493
|||||||||||||||||| | |||||||||||| |||||||||||| |||||||||||||
Sbjct 487 ATGAGGAATGTTGGGCTGCTGAAGACTACTGCAGGCAAAATGGATTGTGGTATCCACTGT 546
Query 494 CGAAGACTCTTGCTGAGAAGGCAGCTTGGGAATTTGCAGAGCAGAAGGGATTGGATGTGG 553
||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct 547 CGAAGACGCTTGCTGAGAAGGCAGCTTGGGAATTTGCAGAGGAGAAAGGATTGGATGTGG 606
Query 554 TTGTGGTGAATCCAGGCACCGTCATGGGGCCTGTGATTCCGCCATCTATAAACGCTAGCA 613
||||||||||||||||||| |||||||||||||||||||| || ||| | ||||||||||
Sbjct 607 TTGTGGTGAATCCAGGCACTGTCATGGGGCCTGTGATTCCTCCGTCTCTTAACGCTAGCA 666
Query 614 TGCTCATGCTTCTACGCCTTCTTCAGGGGTGCACGGAGACATACGAGAACTTCTTCATGG 673
||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 667 TGCACATGCTTCTACGCCTTCTTCAGGGGTGCACGGAGACATACGAGAACTTCTTTATGG 726
Query 674 GGTCTGTGCATTTCAAGGATGTGGCCTTAGCTCATATTCTTGTCTACGAGAATCCATCTG 733
||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||| |
Sbjct 727 GGTCTGTGCATTTCAAGGATGTGGCTTTAGCTCATATTCTTGTATACGAGGATCCATATT 786
Query 734 CGAAAGGAAGGCA-TATGTGCGTCGAGGCCATCTCTCACTACGGTGATTTTGTAGCCAAA 792
||||||||||||| | ||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 787 CGAAAGGAAGGCACT-TGTGCGTTGAGGCTATCTCTCACTACGGTGATTTTGTAGCCAAA 845
Query 793 GTTGCTGAGCTCTATCCCAATTACAGTGTCCCCAAGTTACCGAGAGAGACTCAACCGGGA 852
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 846 GTTGCTGAGCTCTATCCCAATTACAATGTCCCCAAGTTACCGAGAGAGACTCAACCGGGT 905
Query 853 TTACTTCGAGCTAAGAATGCAGCCAAGAAGCTGATGGAATTAGGGTTAGAGTTCAGTTCC 912
|||||||||| |||||||||| | |||||||| || || || |||||| |||||| ||||
Sbjct 906 TTACTTCGAGATAAGAATGCATCAAAGAAGCTCATAGATTTGGGGTTAAAGTTCATTTCC 965
Query 913 ATGGAGGACATCATCAAGGAAGGTGTGGAGAGTCTTAAAAGCAAAGGATTTATCTCTTAA 972
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 966 ATGGAGGAAATCATCAAGGAAGGTGTGGAGAGTCTTAAAAGCAAAGGATTTATCTCTTAA 1025
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 48877825031
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5