BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg495989
Length=1737
Score E
Sequences producing significant alignments: (Bits) Value
AT5G58670.1 | Symbols: ATPLC1, ATPLC, PLC1 | phospholipase C1 |... 2671 0.0
AT4G38530.1 | Symbols: ATPLC1, PLC1 | phospholipase C1 | chr4:1... 435 9e-121
> AT5G58670.1 | Symbols: ATPLC1, ATPLC, PLC1 | phospholipase C1
| chr5:23704231-23706800 REVERSE LENGTH=1961
Length=1961
Score = 2671 bits (1446), Expect = 0.0
Identities = 1644/1739 (95%), Gaps = 16/1739 (1%)
Strand=Plus/Plus
Query 1 TTTTTCTCTCTGGCTTAACTTTCACAACAACAACAACaaaaaaaGATGAAGGAATCATTC 60
||||||||||| |||||||||| | |||| | || ||||||||||||| |||||||||
Sbjct 11 TTTTTCTCTCTCGCTTAACTTT--C-ACAA-GA-AA-AAAAAAAGATGAAAGAATCATTC 64
Query 61 AAAGTGTGTTTCTGTTGTGTAAGAAGCTTCAAGGTGAAATCAAGTGAGCCACCTGAAGAA 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 65 AAAGTGTGTTTCTGTTGTGTAAGAAACTTCAAGGTGAAATCAAGTGAGCCACCTGAAGAA 124
Query 121 ATCAAGAACCTTTTCCATGATTACTCTCAAGACGACAGGATGTCTGCTGACGAGATGCTC 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 125 ATCAAGAACCTTTTCCATGATTACTCTCAAGACGACAGGATGTCTGCTGATGAGATGCTC 184
Query 181 AGATTTGTGATCCAAGTTCAAGGAGAAACACACGCTGATATAAACTACGTCAAGGATATC 240
||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct 185 AGATTCGTGATCCAAGTTCAAGGAGAAACACACGCTGATATCAACTACGTGAAGGATATC 244
Query 241 TTCCACAGACTTAAACATCACGGCGTTTTCCATCCTCGTGGACTTCATCTTGAAGGATTC 300
||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct 245 TTCCACAGACTTAAACATCACGGCGTTTTTCATCCTCGTGGAATTCATCTTGAAGGATTC 304
Query 301 TACCGTTATCTCCTTAGTGATTTCAACTCTCCTTTGCCTGTGACCCGCGAGGTTTGGCAA 360
||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct 305 TACCGTTATCTTCTTAGTGATTTCAACTCTCCATTGCCTCTGACCCGCGAGGTTTGGCAA 364
Query 361 GATATGAATCAGCCTTTATCGCATTACTTCTTGTACACGGGACATAACTCTTACTTGACT 420
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 365 GATATGAATCAGCCATTATCGCATTACTTCTTGTACACGGGACATAACTCTTACTTGACT 424
Query 421 GGGAATCAGTTGAACAGTAAAAGCAGCATCGAACCGATTGTGAAAGCTCTGAGAAGA-GG 479
|||||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||
Sbjct 425 GGGAATCAGTTGAACAGTAATAGCAGCATCGAACCGATTGTGAAAGCTCTGAGAA-ATGG 483
Query 480 AGTTCGTGTGATTGAGCTTGATTTATGGCCTAACTCTTCAGGAAAAGAAGCTGAAGTTCG 539
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 484 AGTTCGTGTCATTGAGCTTGATTTATGGCCTAACTCTTCAGGAAAAGAAGCTGAAGTTCG 543
Query 540 TCACGGCGGGACATTAACGAGTTGTGAAGATCTGCAGAAATGTCTTAACGCGGTTAAGGA 599
||| || ||||| ||||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct 544 TCATGGAGGGACGTTAACGAGTCGTGAAGATCTGCAGAAATGTCTTAACGTGGTTAAGGA 603
Query 600 GAACGCTTTTCAGGTGTCTGCTTATCCTGTTGTGCTTACTTTAGAAGACCATTTAACTCC 659
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 604 GAACGCGTTTCAGGTGTCTGCTTATCCTGTTGTGCTTACTTTAGAAGACCATTTAACTCC 663
Query 660 AAATCTTCAGAAGAAAGTCGCTAAGATGGTGAGTAAGACGTTTGGAGGATCATTGTTTCA 719
|| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 664 AATTCTTCAGAAGAAAGTCGCTAAGATGGTGAGTAAGACGTTTGGGGGATCATTGTTTCA 723
Query 720 ATGTACGGACGAATA-TACAGAGTGTTTTCCTTCACCAGAATCACTCAAGAATAAGATTT 778
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |
Sbjct 724 ATGTACGGACGAA-ACTACAGAGTGTTTTCCTTCACCAGAATCACTCAAGAATAAGATCT 782
Query 779 TGATCTCTACAAAGCCACCAAAAGAGTATCTTCAGACCCAAGTCTCTCAAGGTTCAACAA 838
||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct 783 TGATCTCAACAAAGCCACCAAAAGAGTATCTTCAGACCCAAATCTCAAAAGGTTCAACAA 842
Query 839 CGGATGAATCCATTAAAGCTaaaaaaaTTGCAGATGCAGAAGAACAGGTTCAAGAAGAAG 898
|||||||||||| || ||||||||||||| | |||||||||||||| |||||||||||||
Sbjct 843 CGGATGAATCCACTAGAGCTAAAAAAATTTCGGATGCAGAAGAACAAGTTCAAGAAGAAG 902
Query 899 ATGAGGAGAGTGTAGCGATCGAATACAGAGACTTAATCTCGATTCACGCTGGAAACCGCA 958
||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct 903 ATGAGGAGAGTGTAGCGATTGAATACAGAGACTTAATCTCGATTCACGCTGGGAACCGCA 962
Query 959 AAGGAGGATTGAAGAACTGCTTGAATGGAGATCCTAATCGAGTCATACGTTTAAGCATGA 1018
||||||| |||||||| |||||||||||||||||||| ||||||||||| ||||||||||
Sbjct 963 AAGGAGGGTTGAAGAATTGCTTGAATGGAGATCCTAACCGAGTCATACGGTTAAGCATGA 1022
Query 1019 GTGAGCAGTGGCTTGAAACTTTGGCTAAAACCCGTGGATCTGATTTAGTAAAGTTCACGC 1078
|||||||||||||||| ||| |||| |||||||||||| | |||||||||||||||||||
Sbjct 1023 GTGAGCAGTGGCTTGAGACTCTGGCAAAAACCCGTGGACCCGATTTAGTAAAGTTCACGC 1082
Query 1079 AGCGGAATCTTCTCAGGATATTTCCCAAGACAACACGGTTCGACTCGTCTAACTATGATC 1138
||||||||||| | ||||||||||||||||| |||||||| ||||| |||||||||||||
Sbjct 1083 AGCGGAATCTTTTGAGGATATTTCCCAAGACTACACGGTTTGACTCATCTAACTATGATC 1142
Query 1139 CTCTCGTTGGATGGATTCATGGTGCTCAAATGGTTGCCTTCAATATGCAAAGTCATGGGA 1198
|||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 1143 CTCTCGTTGGGTGGATTCATGGGGCTCAAATGGTTGCCTTCAATATGCAAAGCCATGGGA 1202
Query 1199 GGTATTTATGGATGATGCAAGGATTGTTTAAAGCCAATGGTGGATGTGGCTATGTGAAAA 1258
||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1203 GGTATCTGTGGATGATGCAAGGAATGTTTAAAGCCAATGGTGGATGTGGCTATGTGAAAA 1262
Query 1259 AGCCTGATGTTTTGCTTTCCAATGGTCCTGGAGGTGAAATCTTTGACCCATGTAGTCAAA 1318
|||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||
Sbjct 1263 AGCCTGATGTTTTGCTCTCCAATGGTCCTGAAGGTGAAATCTTTGACCCTTGTAGTCAAA 1322
Query 1319 ACCTCCCGATCAAGACTACTCTTAAGGTGAAGATCTACACTGGAGAAGGTTGGAATATGG 1378
|||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1323 ACCTCCCGATCAAGACAACTCTTAAGGTGAAGATCTACACTGGAGAAGGATGGAATATGG 1382
Query 1379 ATTTTCCTTTAGATCACTTTGATCGATACTCTCCTCCTGATTTCTATGCAAAGGCAAGAG 1438
| |||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 1383 ACTTTCCTTTAGATCACTTTGACCGATACTCTCCTCCTGATTTCTACGCAAAGG------ 1436
Query 1439 TCGGAATCGCAGGGGTTCCATTGGACACAGCAAGTTACAGAACAGAAATAGATACAGACG 1498
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1437 TCGGAATCGCAGGGGTTCCATTGGACACAGCAAGTTACAGAACAGAAATAGATAAAGACG 1496
Query 1499 AATGGTTTCCGATTTGGGACAAGGAGTTCGAGTTCCCATTGCGTGTTCCTGAGTTAGCTA 1558
|||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||| ||
Sbjct 1497 AATGGTTTCCAATTTGGGACAAGGAGTTTGAGTTCCCATTACGTGTTCCTGAGTTATCTC 1556
Query 1559 TTCTGTGTATCACAGTCAAAGACTACGACAGTAACACTCAGAACGATTTCGCTGGCCAGA 1618
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1557 TTCTGTGTATCACAGTCAAAGATTACGACAGTAACACTCAGAACGATTTCGCTGGCCAGA 1616
Query 1619 CATGTCTTCCGCTGTCGGAGGTCAGGCCGGGTATTCGTGCCGTCCGGCTCCATGATCGTG 1678
||||| ||||| |||||||||| ||||| |||||||||||||| |||||||| |||||||
Sbjct 1617 CATGTTTTCCGTTGTCGGAGGTAAGGCCAGGTATTCGTGCCGTTCGGCTCCACGATCGTG 1676
Query 1679 CCGGGGAGGTCTACAAGCATGTGAGACTGCTCATGCGGTTTGTCTTGGAGCCTCGTTAG 1737
|||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1677 CCGGAGAGGTCTACAAGCACGTGAGACTGCTCATGCGGTTTGTCTTGGAGCCTCGTTAG 1735
> AT4G38530.1 | Symbols: ATPLC1, PLC1 | phospholipase C1 | chr4:18020674-18022985
FORWARD LENGTH=1816
Length=1816
Score = 435 bits (235), Expect = 9e-121
Identities = 1253/1719 (73%), Gaps = 171/1719 (10%)
Strand=Plus/Plus
Query 58 TTCAAAGTGTGTTTCTGTTG-TGTAAGAAGCTTCAAGGTGAAATCAAGTG-AGCCACC-- 113
||||||||||| |||||||| | |||||||| |||| |||| | || | |||||||
Sbjct 47 TTCAAAGTGTGCTTCTGTTGCAG-CAGAAGCTTTAAGGAGAAAACGAG-GCAGCCACCAG 104
Query 114 TGAAGAAATCAAGA-ACCTTTTCCATGATTACTCTCAAG--ACGACAGGATGTC-TGCTG 169
|| || ||||||| | || ||| | | ||| |||||| ||| || |||||| | | |
Sbjct 105 TG-AG-CATCAAGAGA-CTCTTCGAAGCTTA--CTCAAGAAACGGCAAGATGTCTTTC-G 158
Query 170 ACGAGATGCTCAGATTTGTGA-TCCAAGTTCAAGGAGAAAC-ACACGC-TGATATAAACT 226
| ||| | || |||||||||| | |||| ||||||| ||| ||||| | | | |||
Sbjct 159 ATGAGCTTCTAAGATTTGTGAGT-GAAGTCCAAGGAG-AACGGCACGCAGGGT-TGGACT 215
Query 227 ACGT-CAAGGATATCTTCCACAGAC-TTAAACATCACGGCGTTTTCCATC-CTCGTGGAC 283
|||| ||| |||||||||||||| | ||||||| ||| |||||| |||| | | |||||
Sbjct 216 ACGTGCAA-GATATCTTCCACAG-CGTTAAACACCACAACGTTTTTCATCAC-CATGGAC 272
Query 284 ---TTCATCTTGAA-GGATTCTACCGTTATCTCCTT-AGTGATTTCAACTCTCCT-TTGC 337
|||||| | || | ||||| || || || ||| || ||| |||||||||| || |
Sbjct 273 TTGTTCATC-TCAACGCCTTCTATCGCTACCT-CTTCAGCGATACCAACTCTCCTCTT-C 329
Query 338 CTGTGACCCGCGAGGTTTGGCAAGATATGAA-TCAGCCTTTATCGCATTACTTCT-TGTA 395
| || | || |||| || || ||||| | ||| |||||||||||||| | ||||
Sbjct 330 CCATGTCTGGCCAGGTGCATCATGACATGAAGGC-GCCGTTATCGCATTACTT-TGTGTA 387
Query 396 CACGGGACATAACTCTTACTTGACTGGGAATCA-GTTGAACAGTAAAAGCAGCATCGAAC 454
|||||||||||||||||||||||||||||| || || |||||| | ||||||| | ||||
Sbjct 388 CACGGGACATAACTCTTACTTGACTGGGAACCAAGT-GAACAGCAGAAGCAGCGTAGAAC 446
Query 455 CGATTGTGAAAGCTCTGAGAAGAGGAGTTCGTGTGATTGAGCTTGATTTATGGCCTAACT 514
|||| ||| | ||||| |||| ||| || ||||| ||||| || ||||||||||| |
Sbjct 447 CGATCGTGCAGGCTCTCAGAAAAGGCGTAAAAGTGATCGAGCTCGACTTATGGCCTAA-T 505
Query 515 C-TTCAGGAAAAGAAGCTGAAGTTCGTCACGGCGGGACA-TTAACGA-GTTGTGAAGATC 571
| |||||| || | |||||||||||||| ||| |||| ||| | | |||||||
Sbjct 506 CCTTCAGGGAACGCTGCTGAAGTTCGTCATGGCAGGACGCTTA-CTTCGCA-TGAAGATT 563
Query 572 TGCAGAAATGTCTTAAC-GCGGTTAAGGAGAACGCTTTTCAGGTGTCTG-CTTATCCTGT 629
||||||||||||| ||| || ||||||| ||||| ||||| ||||||| || |||| ||
Sbjct 564 TGCAGAAATGTCT-AACCGCCATTAAGGATAACGCGTTTCATGTGTCTGACT-ATCCAGT 621
Query 630 TGTGCTT-ACTTTAGAAGACCATTTAACTCCAAATCTTCA-GAAGAAAGTCGCTAAGATG 687
| | | ||| | ||||| ||||| | || || ||||| | | |||| |||||||||
Sbjct 622 CAT-CATCACTCTCGAAGATCATTTGCCACCCAAGCTTCAAGC-GCAAGTTGCTAAGATG 679
Query 688 GTGAGTAAGACGTTTGGAGG-AT-CATTGTTTCAA--TGTA-CGGACGAATATACAGAGT 742
| | ||| || | |||| || | | ||||| ||| | || || | | | ||
Sbjct 680 TTAACTAAAACATACAGAGGGATGC-T-GTTTCGTCGTGTCTCAGA-GAGTTTT-A-AGC 734
Query 743 GTTTTCCTTCACCAGAATCACTCAAGAATAAGATTTTGATCTCTACAAAGCCACCAAAAG 802
|||||| ||||||||| ||| ||| ||||| |||||||||| ||||| ||||| |
Sbjct 735 ATTTTCCATCACCAGAAGAACTTAAGGGGAAGATCCTGATCTCTACGAAGCCTCCAAAGG 794
Query 803 AGTATCTTCAGACCCAAGTCTCT-CAAGGTTCAACAACGGATGAA-TCCATTAAAGCTaa 860
|||||||| ||| | || || | || || || | | ||| |||| | | |||
Sbjct 795 AGTATCTTGAGAGCAAAA-CTGTACA-----CACCA-CA-A-GAACTCCA--ACGGTTAA 843
Query 861 aaaaa-TT-GCAGATGCAGA--AG--AACAGG-TTCAAGAAGAAGAT---GA---GGAGA 907
| | | || | || |||| || |||| | ||| |||||| || || |||||
Sbjct 844 AGAGACTTCGTGGAA-CAGAGTAGCGAACAAGATTCTTGAAGAATATAAAGATATGGAGA 902
Query 908 GTGTAGC-GATCGAATACAGAGACTTAATCTCGATTCACGCTGGAAACCGCAAAGGAGGA 966
||| ||| | | | ||| |||||||| || | || ||||||| |||| |||||| |
Sbjct 903 GTGAAGCTG-TAGGATATAGAGACTTGATAGCAATCCACGCTGCAAACTGCAAAG-ATCC 960
Query 967 TTGAA-GAACTGCTTGAATGGA-GATCCTA-ATCGA-GTC-ATACGTTTAAGCATG-AGT 1020
|| || | | ||||||| || | ||||| | | || | | ||||| | |||||| |
Sbjct 961 TTCAAAGGATTGCTTGAGTG-ATGATCC-AGA--GAAGCCTATACGGGTCAGCATGGAC- 1015
Query 1021 GAGCAGTGGCTTGAAACTTTGGCTAAAACCCGTGGATCTGAT-TTAGTAAAGTTCACGCA 1079
||||||||||| || ||| ||| || ||| | ||| | ||| || || | ||| || ||
Sbjct 1016 GAGCAGTGGCTAGACACTATGGTTAGGACCAGAGGAACGGATCTT-GTCAGGTTTACACA 1074
Query 1080 GCGGAATCTTCTCAGGATATTTCCCAAGA-CAACACG-GTTCGACTCGTCTAACTATGAT 1137
| ||||||| | ||||||| ||| ||| || || | || |||||||| ||||| |||
Sbjct 1075 GAGGAATCTGGTGAGGATATATCCAAAGGGCA-CAAGAGTG-GACTCGTCAAACTACGAT 1132
Query 1138 CCTC-TCGTTGGATGGATTCATGGTGCTCAAATGGTTGCCTTCAATATGCAAAGTCATGG 1196
|||| | ||||| |||| || ||||||||||||||||| || || |||||| | |||||
Sbjct 1133 CCTCAT-GTTGGGTGGACACACGGTGCTCAAATGGTTGCTTTTAACATGCAAGGACATGG 1191
Query 1197 GAGGTATTTATGGATGATGCAAGGATTGTTTAAAGCCAATGGTGGATGTGGCTATGTGAA 1256
|| | | ||||||| ||||||||| |||| | | |||||||||||||| || || ||
Sbjct 1192 GAAGCAACTATGGATAATGCAAGGAATGTTCAGGGGGAATGGTGGATGTGGGTACGTTAA 1251
Query 1257 AAAGCCT-G-ATGTTTTGCTTTCCAATGGTCCTGGAGGTGAAA-TCTTTGACCCATGTAG 1313
||||||| | || || ||| | | | | || | | |||| ||||| | | |
Sbjct 1252 AAAGCCTCGCATCTT--GCT----A--GA-C--G-AGCACACACTCTTCGACCC-T-T-G 1296
Query 1314 TCAAAACCT--CCCGATCAAGACTACTCTTAAGGTGAAGATCTACACTGGAGAAGGTTGG 1371
||||| | ||| || ||||| ||||||||||| ||||| |||||||| ||||| |||
Sbjct 1297 -CAAAAGGTTTCCC-ATTAAGACCACTCTTAAGGTTAAGATTTACACTGGCGAAGGATGG 1354
Query 1372 AATATGGATTTTCCTT--TAGATCACTTTGATCGATACTCTCCTCCTGATTTCTATGCAA 1429
|| ||||||| || | || | |||||||||| |||||||||||| ||||||| | |
Sbjct 1355 GATTTGGATTT-CCATCATACA-CACTTTGATCAATACTCTCCTCCAGATTTCT-T-C-- 1408
Query 1430 AGGCAAGAGTCGGAATCGCAGGGGTTCC-ATTGGACACAG-CA-AGTTACAGAACAGAAA 1486
| ||||| | ||||| ||||| || || | | |||| | | | | ||||||| ||||
Sbjct 1409 -GTCAAGATT-GGAATAGCAGGAGTACCGAGAG-ACACGGTCTCA-T-ACAGAACGGAAA 1463
Query 1487 TAGATA-CAGA-CGAATGGTTTCCGATTTGGGACAA-G--GAGTTCGAGTTCCCAT-TG- 1539
|| | | || | | |||||||| || |||| ||| | |||||| ||| | | ||
Sbjct 1464 CAGCTGTC-GATC-AGTGGTTTCCTATATGGGGCAACGACGAGTTCCTGTTTC-AGCTGT 1520
Query 1540 CGTGTTCCTGAGTTAGCTATTCTGTG-TATCACAGTCAAAGACTACGACAGTAACACTCA 1598
| |||||| || | || ||||||| | ||| |||| |||||||||||| | |||| ||
Sbjct 1521 C-TGTTCCAGAACTGGCGCTTCTGTGGT-TCAAAGTCCAAGACTACGACAATGACACCCA 1578
Query 1599 GAACGATTTCGCTGGCCAGACATGTCTTCCGCTGTCGGAGGTCAGG-CCGG-GTATTCGT 1656
||| |||||||| || |||||||||||||| ||| |||| | | | |||| || | |
Sbjct 1579 GAATGATTTCGCAGGACAGACATGTCTTCCTCTGCCGGAACTGAAGTCCGGAGT-TA-GA 1636
Query 1657 GCCGTCCGGCTCCATGATCGTGCCGGGGAGGTCTACAAG 1695
||||||||||| || ||||| | || ||| |||||||
Sbjct 1637 GCCGTCCGGCTTCACGATCGAACAGGCAAGGCCTACAAG 1675
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 85893132495
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5