BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg496000
Length=1299
Score E
Sequences producing significant alignments: (Bits) Value
AT5G58750.1 | Symbols: | NAD(P)-binding Rossmann-fold superfam... 1860 0.0
> AT5G58750.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr5:23728788-23730122 FORWARD LENGTH=1335
Length=1335
Score = 1860 bits (1007), Expect = 0.0
Identities = 1192/1280 (93%), Gaps = 18/1280 (1%)
Strand=Plus/Plus
Query 25 ATCAAAGTCCATAACTCTCTCATAGTCAAAATGGGGTCTGAAAATGGCAGCTTGGTGGGA 84
||||||||||||||||| || ||| ||| ||||||||||||||||||||||||| || ||
Sbjct 69 ATCAAAGTCCATAACTCACTAATAATCACAATGGGGTCTGAAAATGGCAGCTTGATGAGA 128
Query 85 AGAAACGAAGTAGACGAGAATGTCGCGTTGATCTTTGGCGTCACCGGACTTGTGGGTCGA 144
||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||
Sbjct 129 AGAAACGAAGTAGACGAGAATGTAGCGTTAATCTTTGGCGTCACCGGGCTTGTGGGTCGA 188
Query 145 GAGATTGTTAAGAGGCTATTAACGTCAAAACCAAGATGGAGAATCTATGGCGTAGCGCGA 204
||||||||||||| |||||||| ||| |||||| ||||||||||||| |||||||||||
Sbjct 189 GAGATTGTTAAGACGCTATTAATGTCTAAACCAGGATGGAGAATCTACGGCGTAGCGCGT 248
Query 205 AACCCGGAGATCAATTCCATGACGAAGATGTACAACTTCATCTCATGTGATCTGCTCAAC 264
|||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||
Sbjct 249 AACCCGGAGATCAATTCCATGACGAAGATGTACAACTTCATCTCCTGCGATCTGCTTAAC 308
Query 265 GCATCTGAGACTAAACAGAGGTTGTTTCCATTACAAGACATCGTGAGTCACGTGTTTTGG 324
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 309 GCATCTGAGACTAAACAGAGGTTGTCTCCATTACAAGACATCGTGAGTCACGTGTTTTGG 368
Query 325 GTCACGTGGTCTGGTGAGTATCCACTGGATACCGACGAGTGCTGCGTCCAGAACAAGACG 384
||||||||||||||||||| |||| ||||||||||||| || ||||| ||||||||||||
Sbjct 369 GTCACGTGGTCTGGTGAGTTTCCATTGGATACCGACGAATGTTGCGTACAGAACAAGACG 428
Query 385 ATGCTGATGAACGCTTTGGACGCGATTCTCCCAAACGCTAAGAGGTTAAAGCATTTCTCG 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 429 ATGCTGATGAACGCTTTGGACGCGATTCTCCCAAACGCTAAGAGGTTAAAGCATTTCTCG 488
Query 445 CTTCAGACGGGGATGAAGCATTACGTGTCTTTGGTGGAAGAGACTCTGTTTCGTGGAGAA 504
||||| ||||||||||||||||| |||||||||||||||||||| || ||||||||||
Sbjct 489 CTTCAAACGGGGATGAAGCATTATGTGTCTTTGGTGGAAGAGACAATGGCTCGTGGAGAA 548
Query 505 GGTTCCAGTTTGTGTTATTACACCGAGGAGTGTCCAAGAAAGAGCTCTGGGATGAATTTC 564
||||| ||||||| |||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 549 GGTTCGAGTTTGTATTATTACAGCGAGGAGTGTCCAAGAAAGAGCTCTGGGAAGAATTTC 608
Query 565 TACTATGTTCTGGAGGATTTGCTAAAGGAGAAGATTACTGGTAGTTCCGTGGTTTGGTCG 624
||||||||| ||||||| ||||| ||||||||||| ||| |||||||||| |||||||||
Sbjct 609 TACTATGTTTTGGAGGACTTGCTGAAGGAGAAGATCACTCGTAGTTCCGTTGTTTGGTCG 668
Query 625 GTTCAACGACCCGGTTTGTTAATGGGAAGCTCAACAAGAACTCTGTACAACTTCATGGGA 684
|||||| |||| |||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct 669 GTTCAAAGACCTGGTTTGCTAATGGGAAGCTCTTCAAGAACTCTGTACAACTTCATGGGA 728
Query 685 AGTCTTTGTGTTTATGGAGCGATGTGTAAGTATTTGAATCTTCCTTTTGTGTTTGGAGGG 744
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 729 AGTCTTTGTGTTTATGGAGCGATGTGTAAGTATTTGAATCTTCCTTTTGTGTTTGGAGGA 788
Query 745 ACAAGAGAATGTTGGGAAGAGAGTTACATCGACGGCTCGGATTCAAATTTAGTCGCGGAA 804
||||||||||||||||||||||||||||| || ||||| ||||| ||||||||||||||
Sbjct 789 ACAAGAGAATGTTGGGAAGAGAGTTACATAGATGGCTCTGATTCGAATTTAGTCGCGGAG 848
Query 805 CAGCATATTTTCGCTGCAAGTAGCGGGAAAGTACGCGAGAAAGGTGAAGCCTTTAACGCC 864
|||||||| |||||||||| || |||||||||||||||||||| ||||| |||||||||
Sbjct 849 CAGCATATATTCGCTGCAACAAGTGGGAAAGTACGCGAGAAAGGGGAAGCTTTTAACGCC 908
Query 865 ATTAATGGAGTAGGTTTTACTTGGAAGGAGATTTGGCCGGAAATAGGGAAGAAACTTGGA 924
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 909 ATTAATGGAGTAGGGTTTACTTGGAAGGAGATTTGGCCGGAAATAGGGAAGAAACTTGGT 968
Query 925 GTACAAGTTAACGAAACAACCATGTTTGATGAAGGTTTCTGGTTTGGTAGAGAGATGGCT 984
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct 969 GTACAAGTTAACGAAACAACCATGTTTGATGAAGGTTTCTGGTTTGGGAGAGAGATGGTT 1028
Query 985 GAGAGAAAACATGTGTGGGATGAGATTGTGGTGAAGGAGAAGCTTGTTCAG-ACAAAGAT 1043
||||||||||||||||||||||||||||| |||||||||||||||||| || ||| ||||
Sbjct 1029 GAGAGAAAACATGTGTGGGATGAGATTGTTGTGAAGGAGAAGCTTGTT-AGGACAGAGAT 1087
Query 1044 TGAGGATTTGGCGAATTGGTTTTTCTTGGATGCTCTGTTTAGATGTCCGTTTAAGCTTCT 1103
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1088 TGAGGATTTGGCGAATTGGTATTTCTTGGATGCTCTGTTTAGATGTCCGTTTAAGCTTCT 1147
Query 1104 TGGGAAGAGGGAGAAAGTAGATAAGTTTGGGTTTAAGAGGAAATATAGAACCCTAGATTC 1163
|||||| || || |||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1148 TGGGAAAAGAGAAAAAGTAGATAGGTTTGGGTTTAAGAGGAAATATAGAACCCTAGATTC 1207
Query 1164 GATTTTGTATTGGATTGATGTGATGAGAGATGAAAAACTCATTCCTTTGTAACATATGTA 1223
| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1208 GGTTTTGTATTGGATTGATGTGATGAGAGATGAAAAACTCATTCCTTTGTAACACATGT- 1266
Query 1224 TGTTATACATTAGCAAAATAGCAATGTAGATCACGGTAT----GTACTTGATCAATAATC 1279
||| | ||||||||| | | | |||||||||||| |||||||||||||||||
Sbjct 1267 TGT-A--CATTAGCAA--T-G---T--AGATCACGGTATATATGTACTTGATCAATAATC 1315
Query 1280 CTCATGTAAGTTTTGTTTGT 1299
||||||||||||||||||||
Sbjct 1316 CTCATGTAAGTTTTGTTTGT 1335
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 63905293785
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5