BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg496010
Length=2725
Score E
Sequences producing significant alignments: (Bits) Value
AT5G58870.1 | Symbols: ftsh9 | FTSH protease 9 | chr5:23769811-... 4325 0.0
AT3G47060.1 | Symbols: ftsh7 | FTSH protease 7 | chr3:17332985-... 2338 0.0
> AT5G58870.1 | Symbols: ftsh9 | FTSH protease 9 | chr5:23769811-23773780
REVERSE LENGTH=2751
Length=2751
Score = 4325 bits (2342), Expect = 0.0
Identities = 2614/2743 (95%), Gaps = 27/2743 (1%)
Strand=Plus/Plus
Query 1 AAATGTGTTGCAATGTCTTCCTTTGATTTCCTCAATTTCTAGGGTTTCGAAAG-AAAAAT 59
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1 AAATGTGTTGCAATGTCTTCCTTTGATTTCCTCAATTTCTAGGGTTTCGAAAGAAAAAAT 60
Query 60 AATGACTTCAATCGAATTGCTAAGTCCATTGATCCACGATAAGTTTCGATTCTCAACTTG 119
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 61 AATGACTTCAATCGAATTGCTAAGTCCATTGATTCACGATAAGTTTCGATTCTCAACTTG 120
Query 120 TTGTAGTACTAGTAGTTTATTGTATTTGCATGCTTCGAGCTTTTTCCGAGATCGGTCTTT 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 121 TTGTAGTACTAGTAGTTTATTGTATTTGCATGCTTCGAGCTTTTTCCGAGATCGATCTTT 180
Query 180 TGGTTTTCGTCAGAATCCGAATCGATTTGTCTCCAATTCA---ATTCAACTTCCTCAATC 236
||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct 181 TGGTTTTCGTCAGAATCCGAATCGATTCGTCTCCAATTCATCGATTCAACTTCCTCAATC 240
Query 237 AGTTACAGGGTCGATAAACCATGAAAGGTTCAATCTTTGGCAAGGGTTTTCGAGGAAGAA 296
|||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct 241 AGTTCCAGGGTCGATAAACCAGGAAAGGTTTAATCTTTGGCAAGGGTTTTCGAGGAAGAA 300
Query 297 GAGTAC---TAGTAGTAGAACGATTGTGAATTGTCAAGAAGGTGATCAGAAAGCTAGCTC 353
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 GAGTACTAGTAGTAGTAGAACGATTGTGAATTGTCAAGAAGGTGATCAGAAAGCTAGCTC 360
Query 354 AAGTGAAGGAGAAGGAAAGACGAATAAGCAGAAAGGAGGGAAGCAAGGTAAGAATGGGTT 413
||||||||||||||||||||| |||||| | |||||| |||||||||||||||||| |||
Sbjct 361 AAGTGAAGGAGAAGGAAAGACCAATAAGGATAAAGGACGGAAGCAAGGTAAGAATGAGTT 420
Query 414 ATGGTGGTCTAAAGGGAAGAAATGGCAGTGGGAACCGATTATTCAAGCGCAGGAGATTGG 473
||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||
Sbjct 421 ATGGTGGTCTAAAGGGAAGAAATGGCAATGGAAACCGATAATTCAAGCGCAGGAGATTGG 480
Query 474 TGTTTTATTACTACAATTGGGTATTGTTATGTTTGTGGTGCGATTGCTTCGACCTGGAAT 533
||| | ||||||||||||||||||||||||||||| ||||||||||| ||||| |||||
Sbjct 481 TGTAATGTTACTACAATTGGGTATTGTTATGTTTGTTGTGCGATTGCTCCGACCCGGAAT 540
Query 534 CCCGTTACCGGGTTCGGAGCCTCGCACACAGACGACGTTTATGAGTGTACCGTATAGTGA 593
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 541 CCCGTTACCGGGTTCGGAGCCTCGGACACAGACGACGTTTATGAGTGTACCGTATAGTGA 600
Query 594 TTTCTTGAGTAAAGTTAACAATGATGAGGTTCAGAAAGTGGAGGTGGATGGTGTTCATGT 653
|||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct 601 TTTCTTGAGTAAAGTTAATAATGATGAGGTTCAGAAAGTGGAGGTGGATGGTTTTCATGT 660
Query 654 TTTGTTTAAGTTGAAAGATGATGGGAATTTGCAAGAGAGTGAAACTAGT-G--GTAG--- 707
||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 661 TTTGTTTAAGTTGAAAGATGATGGGAATTTGCAAGAGAGTGAAACTAGTAGTAGTAGTAT 720
Query 708 TAAGCTTTCTGAGTCGTCTGAGACTATGCTTAGAAGTGTGGCTCCGACTAAAAGGGTTGT 767
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 721 TAAGCTCTCTGAGTCGTCTGAGACTATGCTTAGAAGTGTGGCTCCGACTAAAAGAGTTGT 780
Query 768 ATATTCCACCACAAGGCCGAGGGATATTAAAACGCCGTACGAGAAAATGCTTGAGAATAA 827
|||||||| || |||||||||||||| ||||| ||||| ||||||||||||||||||||
Sbjct 781 GTATTCCACTACTAGGCCGAGGGATATCAAAACACCGTATGAGAAAATGCTTGAGAATAA 840
Query 828 TGTGGAATTCGGGTCGCCTGATAAGCGCTCTGGTGGCTTTTTCAACTCTGGATTGATAGT 887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 841 TGTGGAATTCGGGTCGCCTGATAAGCGCTCTGGTGGCTTTTTCAACTCTGGATTGATAGT 900
Query 888 TCTATTCTACATTGCAGTGCTTGCAGGGCTTCTCCACCGATTTCCTGTTAACTTTTCCCA 947
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 901 TCTGTTCTACATTGCAGTGCTTGCAGGGCTTCTCCACCGATTTCCTGTTAACTTTTCCCA 960
Query 948 GAGTACAACGGGACAGCTGAGGACACGCAAGTCTGGTGGTCCTGGTGGGGGAAAGGTTTC 1007
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 961 GAGTACAACGGGACAGCTGAGGACCCGCAAGTCTGGTGGTCCTGGTGGGGGAAAAGTTTC 1020
Query 1008 TGGTGAAGGTGAAACAATCACTTTTGCAGATGTTGCTGGTGTTGATGAAGCAAAGGAAGA 1067
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1021 TGGTGATGGTGAAACAATCACTTTTGCAGATGTTGCTGGTGTTGATGAAGCAAAGGAAGA 1080
Query 1068 GCTGGAAGAGATTGTGGAATTTCTCAAGAATCCTGATAGGTATGTCCGTCTAGGTGCTCG 1127
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1081 GCTGGAAGAGATTGTGGAATTTCTCAAGAATCCTGATAGGTATGTTCGTCTAGGTGCTCG 1140
Query 1128 CCCCCCTCGTGGTGTTTTACCAGTTGGTCTCCCGGGAACAGGGAAAACCCTTCTTGCAAA 1187
|| ||||||||||| ||| || ||||| || ||||||||||||||||||||||||||
Sbjct 1141 TCCTCCTCGTGGTGTCCTACTGGTCGGTCTTCCTGGAACAGGGAAAACCCTTCTTGCAAA 1200
Query 1188 AGCTGTTGCTGGGGAATCTGATGTCCCCTTCATAAGTTGCTCTGCAAGTGAGTTTGTAGA 1247
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct 1201 AGCTGTTGCTGGGGAATCTGATGTTCCATTCATAAGTTGCTCTGCAAGTGAGTTTGTAGA 1260
Query 1248 GCTGTATGTTGGCATGGGTGCTTCACGCGTAAGGGATCTTTTTGCACGGGCCAAGAAGGA 1307
||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||
Sbjct 1261 GCTGTATGTTGGCATGGGTGCCTCACGCGTAAGGGATCTATTTGCACGAGCCAAGAAGGA 1320
Query 1308 GGCTCCGTCAATTATATTTATAGATGAGATAGATGCTGTCGCGAAAAGCCGTGATGGTAA 1367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1321 GGCTCCGTCAATTATATTTATAGATGAGATAGATGCTGTCGCGAAAAGCCGTGATGGTAA 1380
Query 1368 ATTCAGAATGGTCAGCAATGATGAAAGAGAGCAAACTTTGAATCAGTTGCTCACTGAGAT 1427
||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||
Sbjct 1381 ATTCAGAATGGTCAGCAATGATGAAAGGGAGCAAACCTTGAATCAATTGCTCACTGAGAT 1440
Query 1428 GGATGGTTTTGACAGTAGCTCAGCAGTTATTGTTCTTGGAGCTACCAATCGAGCTGATGT 1487
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1441 GGATGGTTTTGACAGTAGCTCTGCAGTTATTGTTCTTGGAGCTACCAATCGAGCTGATGT 1500
Query 1488 CTTAGACCCCGCCCTGCGTCGGCCTGGGAGATTTGATCGTGTTGTTACGGTGGAATCACC 1547
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1501 CTTAGACCCTGCCCTGCGTCGGCCTGGGAGATTTGATCGTGTTGTTACGGTGGAATCACC 1560
Query 1548 TGACAAAGTTGGAAGAGAATCCATATTGAAAGTGCATGTTTCAAAGAAAGAGCTTCCTTT 1607
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1561 TGACAAAGTTGGAAGAGAATCCATTTTGAAAGTGCATGTTTCAAAGAAAGAGCTTCCTTT 1620
Query 1608 GGGAAATGATGTCAACCTAGCTAGTATTGCCTCAATGACAACCGGTTTTACTGGGGCAGA 1667
|||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1621 GGGAGATGATGTCAACCTAGCTAGCATTGCCTCAATGACAACCGGTTTTACTGGGGCAGA 1680
Query 1668 CCTTGCGAACCTAGTTAATGAGGCTGCTTTACTAGCGGGAAGGAAGAGCAAGATGACTGT 1727
|||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1681 CCTTGCAAACCTGGTTAATGAGGCTGCTTTGCTAGCGGGAAGGAAGAGCAAGATGACTGT 1740
Query 1728 TGAAAAAATTGACTTCATTCAGGCTGTCGAGCGATCTATAGCGGGCATAGAGAAGAAAAC 1787
||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1741 TGATAAGATTGACTTCATTCATGCTGTCGAGCGATCTATAGCGGGCATAGAGAAGAAAAC 1800
Query 1788 AGCAAGGTTAAAAGGTAGTGAGAAAGCTGTGGTTGCAAGGCATGAAGCTGGGCATGCTGT 1847
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1801 AGCTAGGTTAAAAGGTAGTGAGAAAGCTGTGGTTGCAAGGCATGAAGCTGGGCATGCTGT 1860
Query 1848 TGTTGGTACCGCTGTTGCAAGTCTTCTTCCTGGACAGTCCCGTGTTGAGAAATTAAGCAT 1907
||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1861 TGTTGGTACAGCTGTTGCAAGTCTTCTTTCTGGACAGTCCCGTGTTGAGAAATTAAGCAT 1920
Query 1908 ATTGCCAAGATCAGGAGGGGCATTGGGCTTTACATACATTCCTCCAACACATGAAGACAG 1967
||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 1921 ATTACCAAGATCAGGAGGGGCATTGGGCTTTACATACATTCCCCCAACGCATGAAGACAG 1980
Query 1968 ATATTTGCT-TTTCATTGATGAACTACATGGCCGCTTGGTAACGCTTCTTGGAGGTCGTG 2026
||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1981 ATATTTGCTCTTT-ATTGATGAACTACATGGCCGCTTGGTAACTCTTCTTGGAGGTCGTG 2039
Query 2027 CAGCTGAAGAGGTTGTTTACTCGGGGCGTATATCAACAGGTGCACTTGATGATATCAGGA 2086
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2040 CAGCTGAAGAGGTTGTTTACTCGGGGCGTATATCAACAGGTGCACTTGATGATATCAGGA 2099
Query 2087 GAGCAACCGACATGGCTTATAAGGCAGTAGCTGAATATGGTCTTAACCAGAAAATCGGAC 2146
|||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||
Sbjct 2100 GAGCAACCGACATGGCCTATAAGGCAGTAGCTGAATATGGTCTCAACGAGAAAATCGGAC 2159
Query 2147 CCGTCTCTGTGGCTACGCTTTCTGCTGGTGGGATTGATGACTCTGGGGGATCACCATGGG 2206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2160 CCGTCTCTGTGGCTACGCTTTCTGCTGGTGGGATTGATGACTCTGGGGGATCACCATGGG 2219
Query 2207 GAAGAGATCAGGGGCATCTAGTTGATCTTGTTCAAAGAGAGGTGACAAATTTGTTGCAAT 2266
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct 2220 GAAGAGATCAGGGGCATCTGGTTGACCTTGTTCAAAGAGAGGTGACAAATTTGTTGCAAT 2279
Query 2267 CTGCTCTGGATGTTGCGTTGACTGTTGTTCGCGCTAATCCAGATGTATTAGAAGGGCTCG 2326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2280 CTGCTCTGGATGTTGCGTTGACTGTTGTTCGCGCTAATCCAGATGTATTAGAAGGGCTCG 2339
Query 2327 GTGCTCAACTGGAAGATGAAGAGAAAGTAGAAGGTGAAGAGTTGCAGAAATGGTTAAATA 2386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2340 GTGCTCAACTGGAAGATGAAGAGAAAGTAGAAGGTGAAGAGTTGCAGAAATGGTTAAATA 2399
Query 2387 GAGTAGTGCCCTCAGAGGAACTTGCAGTGTTCATCAACGGAAAACGAGCTGCTTTGCTTC 2446
||||||| ||||||||||||||||||||||||||||| ||||||| | ||||||| ||||
Sbjct 2400 GAGTAGTACCCTCAGAGGAACTTGCAGTGTTCATCAAAGGAAAACAAACTGCTTTACTTC 2459
Query 2447 CAGCACAAGCTAGCTCCAGTTAACGTCTACACAGCCTCTTGTATCAGCCTG-TGTAAGCA 2505
|||||||||||||||||||||||| |||||| ||||| | || | | |||| |||
Sbjct 2460 CAGCACAAGCTAGCTCCAGTTAACATCTACAAAGCCTATAAAATG-GAAAGATGTATGCA 2518
Query 2506 TCGATGATGACTCTGCCTCACTTAGAAGAATCAAAAAGCTAAAAGGATCTGGTGAGTCCT 2565
|||||||||| |||||||||||||||||||||||||||||||||||| ||| || ||||
Sbjct 2519 TCGATGATGATTCTGCCTCACTTAGAAGAATCAAAAAGCTAAAAGGAGCTGC-GAATCCT 2577
Query 2566 GGCCATCGATGACTTAGTATGTATAGaa-aaaaaaa--GCTTTTACTTGGTATCAAACAG 2622
|| || |||||||||||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct 2578 GGGCAACGATGACTTAGTATGTATAGAAGAAAAAAAAAGCTTTTACTTGGTATCAAACAG 2637
Query 2623 AGCATGTGTTGTTGTATTTGCTACCtttttttCCGCAATGTTATTGGCAATTGTACTATT 2682
|||||||||||||||||||||||||||||| | |||| |||||||||||||||| | ||
Sbjct 2638 AGCATGTGTTGTTGTATTTGCTACCTTTTTCT--GCAAAGTTATTGGCAATTGTATTGTT 2695
Query 2683 GTTCCACTTGtatatatatataCAGAGACCATTTATGTTAATA 2725
|||||||||||||||||| |||||||||||||||||||||
Sbjct 2696 GTTCCACTTGTATATATA----CAGAGACCATTTATGTTAATA 2734
> AT3G47060.1 | Symbols: ftsh7 | FTSH protease 7 | chr3:17332985-17336966
FORWARD LENGTH=2776
Length=2776
Score = 2338 bits (1266), Expect = 0.0
Identities = 2045/2410 (85%), Gaps = 98/2410 (4%)
Strand=Plus/Plus
Query 113 CAACTTGTTGTAGTACTAGTAGTTTATTGTATTTGCATGCTTCGAGCTTTTTCCGA-GAT 171
||||||||||||||| || |||| ||||||| | | | |||||||| ||||| | | |||
Sbjct 61 CAACTTGTTGTAGTAGTAATAGTCTATTGTACTCGAAAGCTTCGAGATTTTT-CAACGAT 119
Query 172 CGGTCT-TTTGGTTT-TCGTCAGAATCCGAATCGATTTGTCTCCAATTCAATTCA-ACTT 228
| || | | ||||| ||| || ||||||||||| |||||||||||||||| ||| |||
Sbjct 120 C-GT-TGTAGGGTTTATCGCCAAAATCCGAATCGGTTTGTCTCCAATTCAA-TCACGCTT 176
Query 229 -C-CT-C-----AATC-AGTTACAGGGTCGATAAACCATGAAAGGTTCAATCTTTGGCAA 279
| || | || | |||||||| || || ||| || |||||||| ||||||||| |
Sbjct 177 CCTCTGCAGAAGAAACAAGTTACAGTGTTGAGAAATCACGAAAGGTTTAATCTTTGGGAT 236
Query 280 GGGTTTTCGAGGAAGAAGAGTACTAGTAGTAGAACGATTGTGAATTGTCAAGAAGGTGAT 339
|||||||| || |||||||| ||| | | | | |||||||||||||||||| ||||
Sbjct 237 GGGTTTTCAAGAAAGAAGAG---TAG-A-T--TA-G-TTGTGAATTGTCAAGAAGATGAT 287
Query 340 CAGAAAGCTAGCTCAAGTGAAGGA-GAAGGAAAG-A--C-GA--A-T-AAGCAGAA--AG 388
||||| | || || |||| |||| ||| ||||| | | || | | || ||| |
Sbjct 288 CAGAACGAGAGTTCTAGTG-AGGAGGAA-GAAAGCAGTCAGAGTACTCCGGC-GAAGTCG 344
Query 389 GAG-GG--AAGCA-AG--GTAAG-A-AT-GGGTTATGGTGGTCTAAAGGG-AAGAAATGG 438
||| || ||| | || | ||| | || || | |||||||| |||||| |||||||||
Sbjct 345 GAGAGGAAAAG-AGAGAAGAAAGAAGATAAGG-TGTGGTGGTC-AAAGGGCAAGAAATGG 401
Query 439 CAGTGGGAACCGATTATTCAAGCGC-AGGAGATTGGTGTTTTATTACTACAATTGGGTAT 497
|||||| | || || || ||||||| ||| |||||| ||||| || | |||||| || |
Sbjct 402 CAGTGGCAGCCAATAATCCAAGCGCAAGG-GATTGGAGTTTTGTTGTTGCAATTGAGTGT 460
Query 498 TGTTATGTTTGTGGTGCGATTGCTTCGACCTGGAATCCCGTTACCGGGTTCGGAGCCTCG 557
||||||||||||| ||||||||||||||||||| || || ||||| || |||||||||||
Sbjct 461 TGTTATGTTTGTGATGCGATTGCTTCGACCTGGTATACCTTTACCTGGATCGGAGCCTCG 520
Query 558 CACACAGACGACGTTTATGAGTGTACCGTATAGTGATTTCTTGAGTAAAGTTAACAATGA 617
| |||||||| ||| ||||||||||||||||||| ||||| ||||||||||||| | |
Sbjct 521 AATTCAGACGACTTTTGTGAGTGTACCGTATAGTGAGTTCTTAAGTAAAGTTAACAGTAA 580
Query 618 TGAGGTTCAGAAAGTGGAGGTGGATGGTGTTCATGTTTTGTTTAAGTTGAA-AGATGATG 676
|||| |||||||||||||| ||||| ||||| |||||||||||||| || ||||||||
Sbjct 581 CCAGGTGCAGAAAGTGGAGGTTGATGGGGTTCAAGTTTTGTTTAAGTT-AAGAGATGATG 639
Query 677 GGAATTTGCAAGAGAGTGAAACTAGTGGTAGTAAGCTT-TCTGAGTCGTCTGAGA-C-TA 733
|||| | ||||||||||||||||| |||| | || ||| |||||||||| | | |
Sbjct 640 GGAAGTGGCAAGAGAGTGAAACTA---GTAG---G-TTGTCTCAGTCGTCTGA-ATCGT- 690
Query 734 TGCTT-AGAAGTGTGGCTCCGACTAAAAGGGTTGTATATTCCACCACAAGGCCGAGG-GA 791
|| || |||| ||||||||| || ||||||||||| |||||||| || |||||| || ||
Sbjct 691 TG-TTAAGAACTGTGGCTCCTACGAAAAGGGTTGTGTATTCCACTACTAGGCCG-GGTGA 748
Query 792 TATTAAAACGCCGTACGAGAAAATGCTTGAGAATAATGTGGAATTCGGGTCGCCTGATAA 851
||| ||||| ||||| ||||| ||||||| ||||||||||||||| || |||||||| ||
Sbjct 749 TATCAAAACACCGTATGAGAAGATGCTTGGGAATAATGTGGAATTTGGATCGCCTGAGAA 808
Query 852 GCGCTCTGGTGGCTTTTTCAACTCTGGATTGATAGTTCTATTCTACATTGCAGTGCTTGC 911
||| ||||||||||| |||||||||| |||||||| ||| |||||||| || || |||||
Sbjct 809 GCGTTCTGGTGGCTTCTTCAACTCTGCATTGATAGCTCTTTTCTACATAGCGGTACTTGC 868
Query 912 AGGGCTTCTCCACCGATTTCCTGTTAACTTTTCCCA-GAGTACAACGGGACAGCTGAGGA 970
|||||| | ||||| ||||||| ||| | ||| |||| |||| || ||||| ||||
Sbjct 869 TGGGCTTAT---TCGATTCCCTGTTAGCTTCT-CCACGAGTTCAACCGGCCAGCTTAGGA 924
Query 971 CACGCAAGTCTGGTGGTCCTGGTGGGGGAAAGGTTTCTGGTGAAGGTGAAACAATCACTT 1030
| || ||| |||||||||||| ||||||||| || ||||||| |||||||||||||||||
Sbjct 925 CCCGAAAGGCTGGTGGTCCTGATGGGGGAAAAGTCTCTGGTGGAGGTGAAACAATCACTT 984
Query 1031 TTGCAGATGTTGCTGGTGTTGATGAAGCAAAGGAAGAGCTGGAAGAGATTGTGGAATTTC 1090
|||| |||||||| |||||||||||||||||||||||||| ||||| || ||||||||||
Sbjct 985 TTGCGGATGTTGCAGGTGTTGATGAAGCAAAGGAAGAGCTAGAAGAAATCGTGGAATTTC 1044
Query 1091 TCAAGAATCCTGATAGGTATGTCCGTCTAGGTGCTCGCCCCCCTCGTGGTGTTTTACCAG 1150
| | ||||||||| | |||||||||||||||||| || || || |||||||| || |
Sbjct 1045 TTAGGAATCCTGAAAAGTATGTCCGTCTAGGTGCACGTCCTCCGCGTGGTGTCCTATTGG 1104
Query 1151 TTGGTC-TCCCGGGAACAGGGAAAACCCTTCTTGCAAAAGCTGTTGCTGGGGAATCTGAT 1209
|||||| |||| |||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct 1105 TTGGTCTTCCC-GGAACAGGGAAAACCCTTCTTGCAAAGGCTGTTGCTGGGGAAGCTGAA 1163
Query 1210 GTCCCCTTCATAAGTTGCTCTGCAAGTGAGTTTGTAGAGCTGTATGTTGGCATGGGTGCT 1269
||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 1164 GTCCCCTTCATAAGTTGCTCTGCAAGTGAGTTTGTAGAGCTGTATGTCGGTATGGGTGCC 1223
Query 1270 TCACGCGTAAGGGATCTTTTTGCACGGGCCAAGAAGGAGGCTCCGTCAATTATATTTATA 1329
||||| |||||||||||||||||||||||||||||||| ||||| || |||||||||||
Sbjct 1224 TCACGTGTAAGGGATCTTTTTGCACGGGCCAAGAAGGAAGCTCCATCGATTATATTTATT 1283
Query 1330 GATGAGATAGATGCTGTCGCGAAAAGCCGTGATGGTAAATTCAGAATGGTCAGCAATGAT 1389
||||||||||||||||| || ||||||||||||||||||||| |||||| ||||| |||
Sbjct 1284 GATGAGATAGATGCTGTGGCAAAAAGCCGTGATGGTAAATTCCGAATGGGGAGCAACGAT 1343
Query 1390 GAAAGAGAGCAAACTTTGAATCAGTTGCTCACTGAGATGGATGGTTTTGACAGTAGCTCA 1449
||||| ||||||||||| ||||||||||||||||||||||||||||||||||| | ||
Sbjct 1344 GAAAGGGAGCAAACTTTAAATCAGTTGCTCACTGAGATGGATGGTTTTGACAGCAATTCT 1403
Query 1450 GCAGTTATTGTTCTTGGAGCTACCAATCGAGCTGATGTCTTAGACCCCGCCCTGCGTCGG 1509
|| ||||| |||||||||||||| ||||| || ||||||||||| || |||||||||||
Sbjct 1404 GCGGTTATCGTTCTTGGAGCTACAAATCGTGCCGATGTCTTAGATCCGGCCCTGCGTCGT 1463
Query 1510 CCTGGGAGATTTGATCGTGTTGTTACGGTGGAATCACCTGACAAAGTTGGAAGAGAATCC 1569
||||||||||||||||||||||||||||||||| | || |||||| ||||||||||||||
Sbjct 1464 CCTGGGAGATTTGATCGTGTTGTTACGGTGGAAACGCCAGACAAAATTGGAAGAGAATCC 1523
Query 1570 ATATTGAAAGTGCATGTTTCAAAGAAAGAGCTTCCTTTGGGAAATGATGTCAACCTAGCT 1629
|| |||| ||| ||||| |||||||||||||||||||||||| ||||||||||||| | |
Sbjct 1524 ATTTTGAGAGTACATGTGTCAAAGAAAGAGCTTCCTTTGGGAGATGATGTCAACCTCGGT 1583
Query 1630 AGTATTGCCTCAATGACAACCGGTTTTACTGGGGCAGACCTTGCGAACCTAGTTAATGAG 1689
||||||||||||||||| || ||||| || |||||||| ||||| ||| | || ||||||
Sbjct 1584 AGTATTGCCTCAATGACCACTGGTTTCACGGGGGCAGATCTTGCAAACTTGGTAAATGAG 1643
Query 1690 GCTGCTTTACTAGCGGGAAGGAAGAGCAAGATGA-CTGTTGAAAAAATTGACTTCATTCA 1748
||||| || ||||| ||||| |||| ||||| || | ||||| |||||||||||||||||
Sbjct 1644 GCTGCCTTGCTAGCTGGAAGAAAGAACAAGACGAAC-GTTGAGAAAATTGACTTCATTCA 1702
Query 1749 GGCTGTCGAGCGATCTATAGCGGGCATAGAGAAGAAAACAGCAAGGTTAAAAGGTAGTGA 1808
||||| |||||||| ||||||||||||||||||||| | ||||| |||||||| | |||
Sbjct 1703 AGCTGTGGAGCGATCAATAGCGGGCATAGAGAAGAAATCTGCAAGATTAAAAGGCAATGA 1762
Query 1809 GAAAGCTGTGGTTGCAAGGCATGAAGCTGGGCATGCTGTTGTTGGTACCGCTGTTGCAAG 1868
||| || ||||| ||||||||||||||||||||||| || |||||||||||||||||||
Sbjct 1763 GAAGGCAGTGGTCGCAAGGCATGAAGCTGGGCATGCAGTGGTTGGTACCGCTGTTGCAAA 1822
Query 1869 TCTTCTTCCTGGACAGTCC-CGTGTTGAGAAATTAAGCATATTGCCAAGATCAGGAGGGG 1927
||||||| |||||||| || |||||||||||||||||||||||||||||| |||||||||
Sbjct 1823 TCTTCTTACTGGACAG-CCACGTGTTGAGAAATTAAGCATATTGCCAAGAACAGGAGGGG 1881
Query 1928 CATTGGGCTTTACATACATTCCTCCAAC-ACATGAAGACAGATATTTGCTTTTCATTGAT 1986
||||||| ||||||||||||||||| || | ||||||||||||||| || |||||||||
Sbjct 1882 CATTGGGATTTACATACATTCCTCCTACTAG-TGAAGACAGATATTTACTCTTCATTGAT 1940
Query 1987 GAACTACATGGCCGCTTGGTAACGCTTCTTGGAGGTCGTGCAGCTGAAGAGGTTGTTTAC 2046
|| || | ||| || || || || |||||||||||||||||||||||||| |||||||||
Sbjct 1941 GAGCTGCTTGGGCGTTTAGTTACCCTTCTTGGAGGTCGTGCAGCTGAAGAAGTTGTTTAC 2000
Query 2047 TCGGGGCGTATATCAACAGGTGCACTTGATGATATCAGGAGAGCAACCGACATGGCTTAT 2106
|| ||||||||||||||||||||| |||||||||| ||| | ||||| || ||||| ||
Sbjct 2001 TCAGGGCGTATATCAACAGGTGCATTTGATGATATAAGGCGGGCAACTGATATGGCATAC 2060
Query 2107 AAGGCAGTAGCTGAATATGGTCTTAACCAGAAAATCGGACCCGTCTCTGTGGCTACGCTT 2166
||||||||||||||||| ||||||||||| ||||||||||| || ||||||||||| |||
Sbjct 2061 AAGGCAGTAGCTGAATACGGTCTTAACCAAAAAATCGGACCTGTGTCTGTGGCTACACTT 2120
Query 2167 TCTGCTGGTGGGATTGATGACTCTGGGGGATCACCATGGGGAAGAGATCAGGGGCATCTA 2226
|||| |||||||||||| || ||||| || || ||||||||||||||||||||| | |||
Sbjct 2121 TCTGGTGGTGGGATTGACGATTCTGGAGGCTCGCCATGGGGAAGAGATCAGGGGAAACTA 2180
Query 2227 GTTGATCTTGTTCAAAGAGAGGTGACAAATTTGTTGCAATCTGCTCTGGATGTTGCGTTG 2286
|||||||||||||||| ||| ||||||| |||||| ||||||||||| ||||||||| ||
Sbjct 2181 GTTGATCTTGTTCAAAAAGAAGTGACAATTTTGTTACAATCTGCTCTCGATGTTGCGCTG 2240
Query 2287 ACTGTTGTTCGCGCTAATCCAGATGTATTAGAAGGGCTCGGTGCTCAACTGGAAGATGAA 2346
||||||| |||||||||||||||||||| |||||||| ||||||||||| ||||| |||
Sbjct 2241 TCTGTTGTACGCGCTAATCCAGATGTATTGGAAGGGCTTGGTGCTCAACTTGAAGA-GAA 2299
Query 2347 -GAGAAAGTAGAAGGTGAAGAGTTGCAGAAATGGTTAA--ATAGAGTAGT-GCCCTCAGA 2402
|||||||||||||||||||| ||||||| ||||||| || | || || || | ||||
Sbjct 2300 AGAGAAAGTAGAAGGTGAAGAACTGCAGAAGTGGTTAAGCAT-G-GTGGTTGCAC-CAGA 2356
Query 2403 GGAACTTGCAGTGTTCATC-AACGGAAAACGAGCTGCTTT-GCTTCCAGCACAAGCTAGC 2460
||||| ||||| || || || ||||| | || ||||| ||| |||||||||||||||
Sbjct 2357 AGAACTCGCAGTCTTTGTCGAA-GGAAAGCAAGA-GCTTTTGCTCCCAGCACAAGCTAGC 2414
Query 2461 TCCAGTTAAC 2470
||||||||||
Sbjct 2415 TCCAGTTAAC 2424
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 135350412214
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5